BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038101
(660 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461612|ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
Length = 667
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/633 (72%), Positives = 530/633 (83%), Gaps = 5/633 (0%)
Query: 31 FPYLRSSPNST---FFIEEFSGFRSKFSSVLFSDSRVSYSVNDD-FDIELGRLLALLPEE 86
+P + SSP S+ +FSG+ KF + L S S S +D F++EL RLLALLPEE
Sbjct: 36 YPTIHSSPFSSPLRILPAKFSGYPRKFPNSLLSSYLASASAGEDEFEVELDRLLALLPEE 95
Query: 87 MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDN 146
MR RVSEHPEL++LIEVVMDLGRKPLARFPSGDF LSDC ITV IE ATSQVGDFA+DN
Sbjct: 96 MRRRVSEHPELHQLIEVVMDLGRKPLARFPSGDFVLSDCPITVQDIEFATSQVGDFAIDN 155
Query: 147 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKT 206
RAGISRTLHRISAIRNRKGAIIGLTCRVGRA+SGSANLLQDLV+DGASLL IGPPGVGKT
Sbjct: 156 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLLLIGPPGVGKT 215
Query: 207 TIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
TIIRE+AR+LANDYKKRVMIVDTS+EIGG+GDIPH GIGNARRMQVPNS+MQHKVLIEAV
Sbjct: 216 TIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAV 275
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNV 326
ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+V
Sbjct: 276 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSV 335
Query: 327 TLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEI 386
TLGDEEA RRGVQKTVLERKGPSTFSC VEI+SKTEL+VH SLEATVDAILSGR P+ E+
Sbjct: 336 TLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGRFPHFEV 395
Query: 387 RRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWE 446
R++ G + V+ E F SSDE++E +VED +E+ EE + + I E PP++G +
Sbjct: 396 RKINSQGVENKVQSEAFVHNSSDEKNE-VVEDGLEMNEESSTLDELICEPPPDMGGSSAQ 454
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
D +R++ YGILE +V+Q IKQL+M+D V+LTDNISEADALLAL SKLKKNS IQAAAK
Sbjct: 455 DTSPVRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAK 514
Query: 507 SHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
SHDIPIY TKT SLVQITKA+RA+++ H + KD SEDKINLSE+IDALEEAR+AIEQV
Sbjct: 515 SHDIPIYVTKTCSLVQITKAVRAILNGHADDLKDFGSEDKINLSERIDALEEARLAIEQV 574
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGE 626
VIPKGE VELLPRPS+I+ +Q DLIRKY+L +++G EPD RLRILPFQTR DE R++ E
Sbjct: 575 VIPKGEPVELLPRPSHIMLLQRDLIRKYKLQSEKIGTEPDVRLRILPFQTRTDEDRHTSE 634
Query: 627 TFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ D D+F S + + GT TVDRLP LP+
Sbjct: 635 SDGLDSGLDDFICSKNGTIGTPNTVDRLPLLPE 667
>gi|147816324|emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
Length = 693
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/633 (72%), Positives = 528/633 (83%), Gaps = 5/633 (0%)
Query: 31 FPYLRSSPNST---FFIEEFSGFRSKFSSVLFSDSRVSYSVNDD-FDIELGRLLALLPEE 86
+P + SSP S+ +FSG+ KF + L S S S +D F++EL RLLALLPEE
Sbjct: 62 YPTIHSSPFSSPLRILPAKFSGYPRKFPNSLLSSYLASASAGEDEFEVELDRLLALLPEE 121
Query: 87 MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDN 146
MR RVSEHPEL++LIEVVMDLGRKPLARFPSGDF LSDC ITV I+ ATSQVGDFA+DN
Sbjct: 122 MRRRVSEHPELHQLIEVVMDLGRKPLARFPSGDFVLSDCPITVQDIKFATSQVGDFAIDN 181
Query: 147 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKT 206
RAGISRTLHRISAIRNRKGAIIGLTCRVGRA+SGSANLLQDLV+DGASLL IGPPGVGKT
Sbjct: 182 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLLLIGPPGVGKT 241
Query: 207 TIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
TIIRE+AR+LANDYKKRVMIVDTS+EIGG+GDIPH GIGNARRMQVPNS+MQHKVLIEAV
Sbjct: 242 TIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAV 301
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNV 326
ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+V
Sbjct: 302 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSV 361
Query: 327 TLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEI 386
TLG EEA RRGVQ TVLERKGPSTFSC VEI+SKTEL+VH SLEATVDAILSGR P+ E+
Sbjct: 362 TLGXEEASRRGVQXTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGRFPHFEV 421
Query: 387 RRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWE 446
R++ G + V+ E F SSDE++E +VED +E+ EE + + I E PP++G +
Sbjct: 422 RKINSQGVENKVQSEAFVHNSSDEKNE-VVEDGLEMNEESSTLDELICEPPPDMGGSSAQ 480
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
D +R++ YGILE +V+Q IKQL+M+D V+LTDNISEADALLAL SKLKKNS IQAAAK
Sbjct: 481 DTSPVRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAK 540
Query: 507 SHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
SHDIPIY TKT SLVQITKA+RA+++ H + KD SEDKINLSE+IDALEEAR+AIEQV
Sbjct: 541 SHDIPIYVTKTCSLVQITKAVRAILNGHADDLKDFGSEDKINLSERIDALEEARLAIEQV 600
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGE 626
VIPKGE VELLPRPS+I+ +Q DLIRKY+L +++G EPD RLRILPFQTR DE R++ E
Sbjct: 601 VIPKGEPVELLPRPSHIMLLQRDLIRKYKLQSEKIGTEPDVRLRILPFQTRTDEDRHTSE 660
Query: 627 TFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ D D+F S + + GT TVDRLP LP+
Sbjct: 661 SDGLDSGLDDFICSKNGTIGTPNTVDRLPLLPE 693
>gi|224056549|ref|XP_002298905.1| predicted protein [Populus trichocarpa]
gi|222846163|gb|EEE83710.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/662 (68%), Positives = 536/662 (80%), Gaps = 11/662 (1%)
Query: 1 MLCFSLFHTSFLIPRCTQCKLQASTF---KHTHFPYLRSSPNSTFFIEEFSGFRSKFSSV 57
ML FSL +P ++ T+ K HF + P F ++ GF +
Sbjct: 1 MLSFSLLQIPHHLPLPPLTEIPHHTYPLSKTLHFSPKQRLPRQ-FLSKKLCGF------L 53
Query: 58 LFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPS 117
S+S VS S D F++ELGRLLALLP+EMR RVSEHPEL +L+EVVMDLGRKPLARFPS
Sbjct: 54 SISNSSVSPSPEDGFEVELGRLLALLPQEMRKRVSEHPELLDLVEVVMDLGRKPLARFPS 113
Query: 118 GDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRA 177
GDF LSDC IT+ ++HATSQVGDFA+DNRAGIS+TLHRISAIRNR+G IIGLTCRVGRA
Sbjct: 114 GDFVLSDCPITLQDLQHATSQVGDFAIDNRAGISQTLHRISAIRNREGQIIGLTCRVGRA 173
Query: 178 VSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
+ GSA+LL+DLV DGASLLFIGPPGVGKTTIIREIAR+LANDYKKRVMIVDTS+EIGG+G
Sbjct: 174 IPGSASLLRDLVHDGASLLFIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDG 233
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
DIPH GIGNARRMQVP+ +MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ
Sbjct: 234 DIPHAGIGNARRMQVPDLDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 293
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
LVATAHG+TIENLI+NPSLEML+GG+Q+VTLGDEEA+RRGVQKTVLERKGPSTFSC VEI
Sbjct: 294 LVATAHGITIENLILNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCGVEI 353
Query: 358 VSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVE 417
+SKTELRVH SLEATVDAILSGR P+VE+ +M G K+T+E+E +TS++++DE++VE
Sbjct: 354 ISKTELRVHRSLEATVDAILSGRSPHVEVCKMSSQGVKKTIEREPAFQTSAEKKDEVLVE 413
Query: 418 DAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQ 477
D +T+ER G + SE PP++G++ E + + LYVYGILE +V+Q I QL+MD AV+
Sbjct: 414 D-FHLTDERIGHNELTSESPPDMGDNSLEHEVPLCLYVYGILETSVIQGINQLKMDAAVR 472
Query: 478 LTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGE 537
LTDNIS+ADALLAL SKLKKN+ IQAAAKSHDIPIY TKTSSL QITKA+RAL+ H
Sbjct: 473 LTDNISDADALLALQSKLKKNAKIQAAAKSHDIPIYVTKTSSLEQITKAIRALMSSHANG 532
Query: 538 FKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLH 597
KD R+E+ LSEKIDALEEAR+A+ QVVIPKGE VELLPR S+I+S+QID IRKYQL
Sbjct: 533 LKDSRTEENTKLSEKIDALEEARIAVMQVVIPKGEPVELLPRSSHIMSLQIDFIRKYQLE 592
Query: 598 YQRVGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFL 657
+R+G EP+ARLRILP+QTR D ET D D+F ++ ++NG+ Y+ DRLP L
Sbjct: 593 TERIGTEPEARLRILPYQTRMDVNNKFIETIGTDSGVDDFISATGDTNGSPYSTDRLPLL 652
Query: 658 PD 659
PD
Sbjct: 653 PD 654
>gi|255557073|ref|XP_002519569.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223541266|gb|EEF42818.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 726
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/634 (70%), Positives = 514/634 (81%), Gaps = 12/634 (1%)
Query: 30 HFP----YLRSSPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPE 85
HFP L S+ NS + R+ + + S S S +DDFD+EL RL+ALLPE
Sbjct: 101 HFPPKSNALFSASNSAY------TNRNPIPAATSTISSASPSPHDDFDMELARLVALLPE 154
Query: 86 EMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVD 145
EMR RVSEH EL++L+EVVMDLGR+PLARFPSGDF LSDC +T+ IEHATSQVGDFA+D
Sbjct: 155 EMRRRVSEHSELHDLVEVVMDLGRRPLARFPSGDFVLSDCPVTLQDIEHATSQVGDFAID 214
Query: 146 NRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGK 205
NRAGISRTLHRISAIRNRKG IIGLTCRVGRA+ GS +LL+DL+QDG+SLL IGPPGVGK
Sbjct: 215 NRAGISRTLHRISAIRNRKGHIIGLTCRVGRAIPGSTSLLRDLIQDGSSLLLIGPPGVGK 274
Query: 206 TTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
TTIIREIAR+LA DYKKRVMIVDTS+EIGG+GDIPH GIGNARRMQVPNS+ QHKVLIEA
Sbjct: 275 TTIIREIARMLATDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDKQHKVLIEA 334
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN 325
VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT+HGVTIENLI+NPSLEML+GG+Q+
Sbjct: 335 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATSHGVTIENLIVNPSLEMLVGGIQS 394
Query: 326 VTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVE 385
VTLGDEEA+RRGVQKTVLERKGPSTFSCAVEI++K ELRVH SLEATVDAILSGR PNVE
Sbjct: 395 VTLGDEEANRRGVQKTVLERKGPSTFSCAVEIIAKNELRVHRSLEATVDAILSGRPPNVE 454
Query: 386 IRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCW 445
+R+M G KETV E + S+ ++DE+ ED +++ +ER FISE PP + E+
Sbjct: 455 VRKMDSQG-KETVRIEPSIDASAQKKDEISFED-LQMKDERISGGGFISESPPYMRENSL 512
Query: 446 EDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAA 505
ED +RLYVYGI EA+V+Q QL++D VQLTDNISEADALLALHSKLKKN GIQAAA
Sbjct: 513 EDEAPLRLYVYGIPEASVIQGTNQLKIDTVVQLTDNISEADALLALHSKLKKNPGIQAAA 572
Query: 506 KSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQ 565
+SHDIPIY TKT+SLVQITKA+R L D E KD RSED SEK DALEE R+AIEQ
Sbjct: 573 ESHDIPIYVTKTNSLVQITKAIRVLASDWDNELKDSRSEDSAKFSEKTDALEETRIAIEQ 632
Query: 566 VVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSG 625
VVIPKGE VELLPRPS I+S+Q+D I+KYQL +++G PD +RILP+QT D S
Sbjct: 633 VVIPKGEPVELLPRPSNIISVQMDFIQKYQLQAEKIGTAPDIHIRILPYQTWLDNRLESS 692
Query: 626 ETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
ET D D FD+ G+S +SNG+ + VDRLP LPD
Sbjct: 693 ETVDVDSRFDDSLGTSDDSNGSTHMVDRLPLLPD 726
>gi|302142922|emb|CBI20217.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/573 (75%), Positives = 494/573 (86%), Gaps = 1/573 (0%)
Query: 87 MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDN 146
MR RVSEHPEL++LIEVVMDLGRKPLARFPSGDF LSDC ITV IE ATSQVGDFA+DN
Sbjct: 1 MRRRVSEHPELHQLIEVVMDLGRKPLARFPSGDFVLSDCPITVQDIEFATSQVGDFAIDN 60
Query: 147 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKT 206
RAGISRTLHRISAIRNRKGAIIGLTCRVGRA+SGSANLLQDLV+DGASLL IGPPGVGKT
Sbjct: 61 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLLLIGPPGVGKT 120
Query: 207 TIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
TIIRE+AR+LANDYKKRVMIVDTS+EIGG+GDIPH GIGNARRMQVPNS+MQHKVLIEAV
Sbjct: 121 TIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAV 180
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNV 326
ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+V
Sbjct: 181 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSV 240
Query: 327 TLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEI 386
TLGDEEA RRGVQKTVLERKGPSTFSC VEI+SKTEL+VH SLEATVDAILSGR P+ E+
Sbjct: 241 TLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGRFPHFEV 300
Query: 387 RRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWE 446
R++ G + V+ E F SSDE++E +VED +E+ EE + + I E PP++G +
Sbjct: 301 RKINSQGVENKVQSEAFVHNSSDEKNE-VVEDGLEMNEESSTLDELICEPPPDMGGSSAQ 359
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
D +R++ YGILE +V+Q IKQL+M+D V+LTDNISEADALLAL SKLKKNS IQAAAK
Sbjct: 360 DTSPVRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAK 419
Query: 507 SHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
SHDIPIY TKT SLVQITKA+RA+++ H + KD SEDKINLSE+IDALEEAR+AIEQV
Sbjct: 420 SHDIPIYVTKTCSLVQITKAVRAILNGHADDLKDFGSEDKINLSERIDALEEARLAIEQV 479
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGE 626
VIPKGE VELLPRPS+I+ +Q DLIRKY+L +++G EPD RLRILPFQTR DE R++ E
Sbjct: 480 VIPKGEPVELLPRPSHIMLLQRDLIRKYKLQSEKIGTEPDVRLRILPFQTRTDEDRHTSE 539
Query: 627 TFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ D D+F S + + GT TVDRLP LP+
Sbjct: 540 SDGLDSGLDDFICSKNGTIGTPNTVDRLPLLPE 572
>gi|356514603|ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 651
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/634 (67%), Positives = 507/634 (79%), Gaps = 25/634 (3%)
Query: 31 FPYLRSSPNSTFFIEEFSGFRSKF---SSVLFSDSRVSYSVNDDFDIELGRLLALLPEEM 87
P LR+ P+ R+ F S +FS+ D+ D+ELGRLLALLPEEM
Sbjct: 38 LPRLRTGPS----------LRASFPAGSGPVFSE--------DELDVELGRLLALLPEEM 79
Query: 88 RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNR 147
R RVS+HPEL +LIEVVMDLGRKPLARFP+GDF +S+ ITV IEHAT+QVGDFA+DNR
Sbjct: 80 RRRVSDHPELPQLIEVVMDLGRKPLARFPTGDFVISEYPITVQDIEHATAQVGDFAIDNR 139
Query: 148 AGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTT 207
AGISRTLHRISAIRNRKG IIGLTCRVGRA+SGSA LLQDL+QDGASLL IGPPGVGKTT
Sbjct: 140 AGISRTLHRISAIRNRKGTIIGLTCRVGRAISGSAKLLQDLIQDGASLLLIGPPGVGKTT 199
Query: 208 IIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVE 267
IIREIAR+LANDYKKRVMIVDTS+EIGG+GDIPH GIGNARRMQVPNS+MQHKVLIEAVE
Sbjct: 200 IIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAVE 259
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVT 327
NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG+TIENLIMNPSLEML+GG+Q+VT
Sbjct: 260 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVT 319
Query: 328 LGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIR 387
LGDEEA RRGVQKTVLERKGPSTFSC VEI+SKTELR+H SLEATVDAILSGR PNVEIR
Sbjct: 320 LGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGRFPNVEIR 379
Query: 388 RMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWED 447
+M+ +E ++ +++S + E+M E A + ++++T + + + + P ++ ED W+
Sbjct: 380 KMKSQEQEEILQDGLVSDSSLQKNGEIMFEKATKGSDDQTNQNESLLKLPIDLVEDSWQL 439
Query: 448 GLLIRLYVYGILEATVVQLIKQLQMDD-AVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
L + L+ YGILEATV+Q +KQL+M+D A+QLTDNISEA+ALLAL SKLKKN GIQAAAK
Sbjct: 440 KLPLSLFCYGILEATVIQGVKQLKMNDAAIQLTDNISEANALLALQSKLKKNPGIQAAAK 499
Query: 507 SHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
SHDIPIY TKTSSL + KA+RAL+ DH KD DKI SE IDALEEAR+AIE
Sbjct: 500 SHDIPIYVTKTSSLEHVAKAIRALVSDHEDGIKDSELTDKIKSSEMIDALEEARMAIEHT 559
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGE 626
VI KGE V+LLPR S+I+S+Q++L+RKYQL +R+ + LRILP DE + S
Sbjct: 560 VILKGEPVDLLPRSSHIISLQLELVRKYQLETRRISGDSGVHLRILPSHYETDEVKTSET 619
Query: 627 T-FDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ FD ++ D+F S+ + NG+ ++DRLP LP+
Sbjct: 620 SEFDSEL-LDDF-ASNGSVNGSFNSLDRLPLLPE 651
>gi|449523614|ref|XP_004168818.1| PREDICTED: uncharacterized protein ycf45-like, partial [Cucumis
sativus]
Length = 640
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/597 (68%), Positives = 480/597 (80%), Gaps = 7/597 (1%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
++DFD EL RLL LLPEEMR R+ EH E ++LIEVV+DLGRKPLARFP+GDF LSD +T
Sbjct: 45 DEDFDDELDRLLVLLPEEMRRRIREHEECHQLIEVVLDLGRKPLARFPTGDFLLSDSLVT 104
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
V + HATS+VGDFA+DNRAGISRTLHRISAIRNRKG IIGLTCRVGRA+SGSA LL+DL
Sbjct: 105 VDDLRHATSKVGDFAIDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAISGSAILLRDL 164
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+QDGASLL IGPPGVGKTTIIREIAR+LAND+KKRVMIVDTS+EIGG+GDIPH GIGNAR
Sbjct: 165 IQDGASLLLIGPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNAR 224
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQVP+S+MQHKVLIEAVENHMPQVI+IDEI TKLEAMAASTIAQRGIQLVATAHGVTIE
Sbjct: 225 RMQVPDSDMQHKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIE 284
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NLIMNP LEML+GG+Q+VTLGDEEA RR VQKTVLERKGPSTF+C VEI+SKTELRVH S
Sbjct: 285 NLIMNPLLEMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRS 344
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTG 428
L+ATVDA+L GR PNVE+R++ KET++ + T + +D+ V + E++G
Sbjct: 345 LDATVDAVLCGRYPNVEVRKINSTEEKETMQSDISISTIAQNKDDAPVS-VSDTYYEQSG 403
Query: 429 KI--QFISEFPPNIGEDCWED--GLLIRLYVYGILEATVVQLIKQLQMDD-AVQLTDNIS 483
+ + E P GE ED + L+VYG+LEA+V+Q KQL+M+D A+ TDNIS
Sbjct: 404 QAPSEMSFEVLPTAGESSEEDEGKFPLYLFVYGVLEASVIQGFKQLRMNDVAIHFTDNIS 463
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRS 543
EADAL AL KLKKN+GIQAAAKSHDIPIY KT SLV IT+ALRALI D E +D S
Sbjct: 464 EADALFALQPKLKKNAGIQAAAKSHDIPIYVVKTGSLVHITRALRALIIDQEDEGEDFES 523
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
++ SEKIDALEEAR+AIEQ+VIP+ ESVELLPRP +ILS+Q+DLIRKY L +R+G
Sbjct: 524 LGRMRSSEKIDALEEARMAIEQIVIPREESVELLPRPPHILSLQMDLIRKYHLQSERIGM 583
Query: 604 EPDARLRILPFQTRR-DEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
E + RLRILP DE + D EFD+F GS+ ++NGT Y+VDRLP LP+
Sbjct: 584 ETNVRLRILPLIANNVDENAKTQGKVDPTTEFDDFIGSNGDTNGTLYSVDRLPLLPE 640
>gi|449456721|ref|XP_004146097.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 644
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/597 (68%), Positives = 480/597 (80%), Gaps = 7/597 (1%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
++DFD EL RLL LLPEEMR R+ EH E ++LIEVV+DLGRKPLARFP+GDF LSD +T
Sbjct: 49 DEDFDDELDRLLVLLPEEMRRRIREHEECHQLIEVVLDLGRKPLARFPTGDFLLSDSLVT 108
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
V + HATS+VGDFA+DNRAGISRTLHRISAIRNRKG IIGLTCRVGRA+SGSA LL+DL
Sbjct: 109 VDDLRHATSKVGDFAIDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAISGSAILLRDL 168
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+QDGASLL IGPPGVGKTTIIREIAR+LAND+KKRVMIVDTS+EIGG+GDIPH GIGNAR
Sbjct: 169 IQDGASLLLIGPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNAR 228
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQVP+S+MQHKVLIEAVENHMPQVI+IDEI TKLEAMAASTIAQRGIQLVATAHGVTIE
Sbjct: 229 RMQVPDSDMQHKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIE 288
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NLIMNP LEML+GG+Q+VTLGDEEA RR VQKTVLERKGPSTF+C VEI+SKTELRVH S
Sbjct: 289 NLIMNPLLEMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRS 348
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTG 428
L+ATVDA+L GR PNVE+R++ KET++ + T + +D+ V + E++G
Sbjct: 349 LDATVDAVLCGRYPNVEVRKINSTEEKETMQSDISISTIAQNKDDAPVS-VSDTYYEQSG 407
Query: 429 KI--QFISEFPPNIGEDCWED--GLLIRLYVYGILEATVVQLIKQLQMDD-AVQLTDNIS 483
+ + E P GE ED + L+VYG+LEA+V+Q KQL+M+D A+ TDNIS
Sbjct: 408 QAPSEMSFEVLPTAGESSEEDEGKFPLYLFVYGVLEASVIQGFKQLRMNDVAIHFTDNIS 467
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRS 543
EADAL AL KLKKN+GIQAAAKSHDIPIY KT SLV IT+ALRALI D E +D S
Sbjct: 468 EADALFALQPKLKKNAGIQAAAKSHDIPIYVVKTGSLVHITRALRALIIDQEDEGEDFES 527
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
++ SEKIDALEEAR+AIEQ+VIP+ ESVELLPRP +ILS+Q+DLIRKY L +R+G
Sbjct: 528 LGRMRSSEKIDALEEARMAIEQIVIPREESVELLPRPPHILSLQMDLIRKYHLQSERIGM 587
Query: 604 EPDARLRILPF-QTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
E + RLRILP DE + D EFD+F GS+ ++NGT Y+VDRLP LP+
Sbjct: 588 ETNVRLRILPLIANNVDENAKTQGKVDPTTEFDDFIGSNGDTNGTLYSVDRLPLLPE 644
>gi|18086459|gb|AAL57683.1| At1g73170/T18K17_17 [Arabidopsis thaliana]
Length = 666
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/596 (63%), Positives = 465/596 (78%), Gaps = 10/596 (1%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
D FD EL RLLAL+PEE+R + EHPE+ ELIE+V+DLGRKPLARFPSGDF +SD + V
Sbjct: 75 DHFDDELRRLLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDFVISDDAVRV 134
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E A SQVG+F DNRAGISRTLHRISAIRNRKG IIGLTCRVGR+V GSANLL+DLV
Sbjct: 135 KDLEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLV 194
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
QDG SLL IGPPGVGKTT+IRE+AR+L NDY+KRVMIVDTS+EIGG+GDIPHPGIGNARR
Sbjct: 195 QDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARR 254
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVPNS+ QHKVLIEAVENHMPQVIVIDEIGTKLEA+AASTIA+RGIQLVATAHG TIEN
Sbjct: 255 MQVPNSDTQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIEN 314
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
LI NPSL++L+GGVQ+VTLGDEEA RRG QKTVLERKGPSTF+C EIVSKTE+RVH SL
Sbjct: 315 LIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSL 374
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKE-FFAETSSDEEDEMMVEDAMEVTEERTG 428
EATVDAIL+GR+PNVEIR+++ G + +EKE F E + D++ E D ++T+E T
Sbjct: 375 EATVDAILAGRLPNVEIRKIKSHGVEVIMEKEPFIDEKTVDKKHEEETLDVSKLTKEET- 433
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+ + + + E L+ LYVYGI E+TV+Q IKQL+M+ AV+LTD+ISEA+AL
Sbjct: 434 -VSEVLQTKEITEAESSEKDTLMYLYVYGIAESTVLQAIKQLEMETAVELTDDISEAEAL 492
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKIN 548
LAL +K++KN I++ A SH IP+Y TKT+S +Q+ KA+RAL+ D+ + SED++
Sbjct: 493 LALQAKIRKNPRIKSFATSHGIPVYVTKTNSGIQVAKAIRALLTDYEDGLGEFGSEDRLK 552
Query: 549 LSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDAR 608
LSEK+DALEEAR+AIE++VIPK E+ +LLPRP I+S+Q L+RKY L +R + +
Sbjct: 553 LSEKMDALEEARLAIERIVIPKKETTDLLPRPPRIVSLQGKLVRKYNLRSERKWRGDEMY 612
Query: 609 LRILPFQTRRDEPRNS-----GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
LRILP+ T D GE E E DE ++ SN + +DRLP LPD
Sbjct: 613 LRILPYSTEEDRDDREDEGEFGEANGE--ELDELGFATGESNDSPSGIDRLPLLPD 666
>gi|22330595|ref|NP_177460.2| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197301|gb|AEE35422.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 666
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/596 (63%), Positives = 466/596 (78%), Gaps = 10/596 (1%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
D FD EL RLLAL+PEE+R + EHPE+ ELIE+V+DLGRKPLARFPSGDF +SD + V
Sbjct: 75 DHFDDELRRLLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDFVISDDAVRV 134
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E A SQVG+F DNRAGISRTLHRISAIRNRKG IIGLTCRVGR+V GSANLL+DLV
Sbjct: 135 KDLEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLV 194
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
QDG SLL IGPPGVGKTT+IRE+AR+L NDY+KRVMIVDTS+EIGG+GDIPHPGIGNARR
Sbjct: 195 QDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARR 254
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVPNS++QHKVLIEAVENHMPQVIVIDEIGTKLEA+AASTIA+RGIQLVATAHG TIEN
Sbjct: 255 MQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIEN 314
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
LI NPSL++L+GGVQ+VTLGDEEA RRG QKTVLERKGPSTF+C EIVSKTE+RVH SL
Sbjct: 315 LIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSL 374
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKE-FFAETSSDEEDEMMVEDAMEVTEERTG 428
EATVDAIL+GR+PNVEIR+++ G + +EKE F E + D++ E D ++T+E T
Sbjct: 375 EATVDAILAGRLPNVEIRKIKSHGVEVIMEKEPFIDEKTVDKKHEEETLDVSKLTKEET- 433
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+ + + + E L+ LYVYGI E+TV+Q IKQL+M+ AV+LTD+ISEA+AL
Sbjct: 434 -VSEVLQTKEITEAESSEKDTLMYLYVYGIAESTVLQAIKQLEMETAVELTDDISEAEAL 492
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKIN 548
LAL +K++KN I++ A SH IP+Y TKT+S +Q+ KA+RAL+ D+ + SED++
Sbjct: 493 LALQAKIRKNPRIKSFATSHGIPVYVTKTNSGIQVAKAIRALLTDYEDGLGEFGSEDRLK 552
Query: 549 LSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDAR 608
LSEK+DALEEAR+AIE++VIPK E+ +LLPRP I+S+Q L+RKY L +R + +
Sbjct: 553 LSEKMDALEEARLAIERIVIPKKETTDLLPRPPRIVSLQGKLVRKYNLRSERKWRGDEMY 612
Query: 609 LRILPFQTRRDEPRNS-----GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
LRILP+ T D GE E E DE ++ SN + +DRLP LPD
Sbjct: 613 LRILPYSTEEDRDDREDEGEFGEANGE--ELDELGFATGESNDSPSGIDRLPLLPD 666
>gi|297842057|ref|XP_002888910.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297334751|gb|EFH65169.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/657 (60%), Positives = 487/657 (74%), Gaps = 25/657 (3%)
Query: 10 SFLIPRCTQCKLQASTFKHTHFPYLRSSPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVN 69
SFL RC L F HT F + SS I S +
Sbjct: 23 SFLKLRCRSSLLFHHLF-HTKFLLVSSSSPGVVAISASSSPVPELED------------E 69
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
D FD EL RLLAL+PEE+R + +HPE+ ELIE+V+DLGRKPLARFPSGD +SD ++V
Sbjct: 70 DHFDDELRRLLALVPEEIRRTLEKHPEISELIEIVLDLGRKPLARFPSGDSVISDEAVSV 129
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E A SQVG+F DNRAGISRTLHRISAIRNRKG IIGLTCRVGR+V GSANLL+DLV
Sbjct: 130 KDLEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLV 189
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
QDG SLL IGPPGVGKTT+IRE+AR+L NDY+KRVMIVDTS+EIGG+GDIPHPGIGNARR
Sbjct: 190 QDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARR 249
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVPNS++QHKVLIEAVENHMPQVIVIDEIGTKLEA+AASTIA+RGIQLVATAHG TIEN
Sbjct: 250 MQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIEN 309
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
LI NPSL++L+GGVQ+VTLGDEEA RRG QKTVLERKGP TF+C EIVSKTE+RVH SL
Sbjct: 310 LIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPPTFNCGAEIVSKTEVRVHRSL 369
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKE-FFAETSSDEEDEMMVEDAMEVTEERTG 428
EATVDA+L+GR+PNVEIR+++ G + VEKE F ET+ D++ E E+ ++V+ +
Sbjct: 370 EATVDAVLAGRLPNVEIRKIKSHGVEVIVEKEPFIDETTVDKKHE---EETLDVS--KLA 424
Query: 429 KIQFISEFPPN--IGE-DCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEA 485
K + ISE P I E + E L+ LY+YGI E+TV+Q IKQL+M+ AV+LTD+ISEA
Sbjct: 425 KEEIISEVIPTKEITEAESSEQETLMYLYIYGIAESTVLQAIKQLEMETAVELTDDISEA 484
Query: 486 DALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSED 545
+ALLAL +K++KN I++ A SH IP+Y TKT+S +Q+ KA+RAL+ D+ + SED
Sbjct: 485 EALLALQAKIRKNPRIKSLATSHGIPVYVTKTNSGIQVAKAIRALLTDYEDRLGEFGSED 544
Query: 546 KINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEP 605
++ LSEK+DALEEAR+AIE+VV+PK E+ +LLPRP I+S+Q L+RKY L +R +
Sbjct: 545 RLKLSEKMDALEEARLAIERVVVPKKETADLLPRPPRIVSLQGKLVRKYNLRSERKWRGD 604
Query: 606 DARLRILPFQT---RRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ LRILP+ T R D + E DEF ++ SN + +DRLP LPD
Sbjct: 605 EMYLRILPYGTEEDRDDGEDEGEFEEENGEELDEFGCATGESNDSPSCIDRLPLLPD 661
>gi|125554146|gb|EAY99751.1| hypothetical protein OsI_21736 [Oryza sativa Indica Group]
Length = 582
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/589 (64%), Positives = 454/589 (77%), Gaps = 16/589 (2%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
RLL LLP E+R RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATS
Sbjct: 3 RLLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDFLLSQSPISFDDLRHATS 62
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
QVGDF DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAV GSANLLQDLV+DG SLL
Sbjct: 63 QVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSLLL 122
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
IGPPGVGKTT+IREIAR+LA+DY+KRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +M
Sbjct: 123 IGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDM 182
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QHKVLIEAVENHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHG+TIENLIMNPSL+
Sbjct: 183 QHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLD 242
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
ML+GGVQ+VTLGDEEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLE TVDA+L
Sbjct: 243 MLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALL 302
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSD----EEDEMMVEDAMEVTEERTGKIQFI 433
+G++PNVEIR++ GSK V++ + + D E + D++ +
Sbjct: 303 AGKMPNVEIRKV---GSKGPVQEVYVQKERLDLGPSEGATQLDTDSLSNARRSLDSAFNL 359
Query: 434 SEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHS 493
+IG + L LY YGI E+T +Q IKQL+++D V LT NISEADA++AL S
Sbjct: 360 DPAEGHIGRSTEAEPDL-NLYAYGISESTALQAIKQLELEDIVTLTYNISEADAVIALQS 418
Query: 494 KLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKI 553
KLKKN+ IQA KS DIP++ TKT+SLVQI +ALRAL+DDHT D +++ SE+
Sbjct: 419 KLKKNTQIQAVVKSQDIPVFFTKTNSLVQIRRALRALVDDHTDGLMDFEDTEEVRSSEET 478
Query: 554 DALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
DALEEAR+AIEQVVIPKGESV+LLPRP I++ Q+DL+ ++L ++ +G+EP+A LRILP
Sbjct: 479 DALEEARLAIEQVVIPKGESVQLLPRPPSIIASQVDLVESFKLKWESIGQEPNACLRILP 538
Query: 614 FQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYT---VDRLPFLPD 659
+E G++ ++ + S NS+ Y V RLPFLP+
Sbjct: 539 QFVGVEE---GGKSVKQEAATELT--DSDNSDDMDYKQNGVSRLPFLPE 582
>gi|125596098|gb|EAZ35878.1| hypothetical protein OsJ_20178 [Oryza sativa Japonica Group]
Length = 581
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/589 (64%), Positives = 454/589 (77%), Gaps = 17/589 (2%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
RLL LLP E+R RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATS
Sbjct: 3 RLLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDFLLSQSPISFDDLRHATS 62
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
QVGDF DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAV GSANLLQDLV+DG SLL
Sbjct: 63 QVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSLLL 122
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
IGPPGVGKTT+IREIAR+LA+DY+KRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +M
Sbjct: 123 IGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDM 182
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QHKVLIEAVENHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHG+TIENLIMNPSL+
Sbjct: 183 QHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLD 242
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
ML+GGVQ+VTLGDEEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLE TVDA+L
Sbjct: 243 MLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALL 302
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSD----EEDEMMVEDAMEVTEERTGKIQFI 433
+G++PNVEIR++ GSK V++ + + D E + D++ +
Sbjct: 303 AGKMPNVEIRKV---GSKGPVQEVYVQKERLDLGPSEGATQLDTDSLSNARRSLDSAFNL 359
Query: 434 SEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHS 493
+IG + L LY YGI E+T +Q IKQL+++D V LT NISEADA++AL S
Sbjct: 360 DPAEGHIGRSTEAEPDL-NLYAYGISESTALQAIKQLELEDIVTLTYNISEADAVIALQS 418
Query: 494 KLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKI 553
KLKKN+ IQA KS DIP++ TKT+SLVQI +ALRAL+DDHT D + ++ SE+
Sbjct: 419 KLKKNTQIQAVVKSQDIPVFFTKTNSLVQIRRALRALVDDHTDGLMDF-EDTEVRSSEET 477
Query: 554 DALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
DALEEAR+AIEQVVIPKGESV+LLPRP I++ Q+DL+ ++L ++ +G+EP+A LRILP
Sbjct: 478 DALEEARLAIEQVVIPKGESVQLLPRPPSIIASQVDLVESFKLKWESIGQEPNACLRILP 537
Query: 614 FQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYT---VDRLPFLPD 659
+E G++ ++ + S NS+ Y V RLPFLP+
Sbjct: 538 QFVGVEE---GGKSVKQEAATELT--DSDNSDDMDYKQNGVSRLPFLPE 581
>gi|115466506|ref|NP_001056852.1| Os06g0155600 [Oryza sativa Japonica Group]
gi|55296694|dbj|BAD69412.1| ATPase-like [Oryza sativa Japonica Group]
gi|55297449|dbj|BAD69300.1| ATPase-like [Oryza sativa Japonica Group]
gi|113594892|dbj|BAF18766.1| Os06g0155600 [Oryza sativa Japonica Group]
Length = 643
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/589 (64%), Positives = 454/589 (77%), Gaps = 17/589 (2%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
RLL LLP E+R RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATS
Sbjct: 65 RLLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDFLLSQSPISFDDLRHATS 124
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
QVGDF DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAV GSANLLQDLV+DG SLL
Sbjct: 125 QVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSLLL 184
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
IGPPGVGKTT+IREIAR+LA+DY+KRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +M
Sbjct: 185 IGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDM 244
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QHKVLIEAVENHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHG+TIENLIMNPSL+
Sbjct: 245 QHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLD 304
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
ML+GGVQ+VTLGDEEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLE TVDA+L
Sbjct: 305 MLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALL 364
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSD----EEDEMMVEDAMEVTEERTGKIQFI 433
+G++PNVEIR++ GSK V++ + + D E + D++ +
Sbjct: 365 AGKMPNVEIRKV---GSKGPVQEVYVQKERLDLGPSEGATQLDTDSLSNARRSLDSAFNL 421
Query: 434 SEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHS 493
+IG + L LY YGI E+T +Q IKQL+++D V LT NISEADA++AL S
Sbjct: 422 DPAEGHIGRSTEAEPDL-NLYAYGISESTALQAIKQLELEDIVTLTYNISEADAVIALQS 480
Query: 494 KLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKI 553
KLKKN+ IQA KS DIP++ TKT+SLVQI +ALRAL+DDHT D + ++ SE+
Sbjct: 481 KLKKNTQIQAVVKSQDIPVFFTKTNSLVQIRRALRALVDDHTDGLMDF-EDTEVRSSEET 539
Query: 554 DALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
DALEEAR+AIEQVVIPKGESV+LLPRP I++ Q+DL+ ++L ++ +G+EP+A LRILP
Sbjct: 540 DALEEARLAIEQVVIPKGESVQLLPRPPSIIASQVDLVESFKLKWESIGQEPNACLRILP 599
Query: 614 FQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYT---VDRLPFLPD 659
+E G++ ++ + S NS+ Y V RLPFLP+
Sbjct: 600 QFVGVEE---GGKSVKQEAATELT--DSDNSDDMDYKQNGVSRLPFLPE 643
>gi|242092028|ref|XP_002436504.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
gi|241914727|gb|EER87871.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
Length = 657
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/575 (65%), Positives = 440/575 (76%), Gaps = 16/575 (2%)
Query: 91 VSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGI 150
V HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATSQVGDF DNRAGI
Sbjct: 93 VETHPELPALVEVVMDLGRPPLARFPSGDFLLSHRPISFDDLRHATSQVGDFGADNRAGI 152
Query: 151 SRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIR 210
SRTLHRISAIRNRKG I+GLTCRVGRAV GSANLLQDLV+DG SLL IGPPGVGKTT+IR
Sbjct: 153 SRTLHRISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTTVIR 212
Query: 211 EIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHM 270
EIAR+LA+DYKKRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +MQHKVLIEAVENHM
Sbjct: 213 EIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVENHM 272
Query: 271 PQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGD 330
PQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+VTLGD
Sbjct: 273 PQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGD 332
Query: 331 EEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQ 390
EEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLEATVDA+L+G++PNVEIR++
Sbjct: 333 EEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNVEIRKLG 392
Query: 391 HDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE--RTGKIQFISEFPPNIGEDCWE-- 446
G + V + E + + DA E + R + S F + E E
Sbjct: 393 SKGLMQEV-------SVQKERSHLGISDATEFDRDSLRNARRSLDSAFNLDSAEGHIERT 445
Query: 447 --DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAA 504
DG + LY YGI E+T +Q I+QL+++D V LT NISEADA++ALHSKLKKNS IQA
Sbjct: 446 DGDGSSLNLYAYGISESTALQAIQQLELEDIVTLTYNISEADAVIALHSKLKKNSQIQAL 505
Query: 505 AKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIE 564
KS DIP++ KT+SL QIT+ALRAL+DDH E D +++ E+ DALEEAR+AIE
Sbjct: 506 VKSQDIPVFFVKTNSLSQITRALRALVDDHMDELIDYDDKEEARSPEETDALEEARLAIE 565
Query: 565 QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNS 624
QVVIPKGESV+LLPRPS I+S Q+DL+ + L ++ +G+EP A + ILP ++
Sbjct: 566 QVVIPKGESVQLLPRPSSIISSQVDLVESFSLQWEVIGQEPHAYVTILPHFAPKEAEAIQ 625
Query: 625 GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
ET + E SS + + + + RLPFLPD
Sbjct: 626 KETPAAGLADSE---SSDDLDHAQNGITRLPFLPD 657
>gi|226498156|ref|NP_001142150.1| uncharacterized protein LOC100274315 [Zea mays]
gi|223947319|gb|ACN27743.1| unknown [Zea mays]
gi|413942919|gb|AFW75568.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 661
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/582 (65%), Positives = 443/582 (76%), Gaps = 25/582 (4%)
Query: 90 RVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS--QVGDFAVDNR 147
RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATS QVGDF DNR
Sbjct: 93 RVETHPELPALVEVVMDLGRPPLARFPSGDFLLSQRPISFDDLRHATSHSQVGDFGADNR 152
Query: 148 AGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTT 207
AGISRTLHRISAIRNRKG I+GLTCRVGRAV GSANLLQDLV+DG SLL IGPPGVGKTT
Sbjct: 153 AGISRTLHRISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTT 212
Query: 208 IIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVE 267
+IREIAR+LA+DYKKRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +MQHKVLIEAVE
Sbjct: 213 VIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVE 272
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVT 327
NHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+VT
Sbjct: 273 NHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVT 332
Query: 328 LGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIR 387
LGDEEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLEATVDA+L+G++PN EIR
Sbjct: 333 LGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNFEIR 392
Query: 388 RMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE--RTGKIQFISEFPPNIGED-- 443
++ GS + V + E+ + + DA E + R + S F + E
Sbjct: 393 KLGSKGSMQEV-------SVQKEQSHLGIYDATEFGSDSLRNARRSLDSAFSLDSAEGHI 445
Query: 444 CWEDGL--LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGI 501
DG LY YGI E+T +Q I QL++DD+V LT NISEADA++ALHSKLKKN I
Sbjct: 446 VRSDGADSSFNLYAYGISESTALQAIHQLELDDSVTLTYNISEADAVIALHSKLKKNYQI 505
Query: 502 QAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARV 561
QA KS DIP++ KT+SL QIT+ALRAL+DDH E D +++ SE+ DALEEAR+
Sbjct: 506 QAVLKSQDIPVFLVKTNSLPQITRALRALVDDHMDEVIDYNDKEEARSSEETDALEEARL 565
Query: 562 AIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP-FQTRRDE 620
AIEQVVIPKGESV+LLPRPS I+S Q+ L+ + L ++ VG+EP A +RILP F ++ E
Sbjct: 566 AIEQVVIPKGESVQLLPRPSSIISSQVGLVESFSLKWEVVGQEPKACVRILPHFAPKQVE 625
Query: 621 P---RNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
E D D E S +S+ T+ + RLPFLPD
Sbjct: 626 AVARETPAEPADSDWE------SHDDSDHTQSGITRLPFLPD 661
>gi|12324328|gb|AAG52137.1|AC010556_19 putative ATPase; 52924-55985 [Arabidopsis thaliana]
Length = 652
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/596 (62%), Positives = 454/596 (76%), Gaps = 24/596 (4%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
D FD EL RLLAL+PEE+R + EHPE+ ELIE+V+DLGRKPLARFPSGDF +SD + V
Sbjct: 75 DHFDDELRRLLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDFVISDDAVRV 134
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E A SQVG+F DNRAGISRTLHRISAIRNRKG IIGLTCRVGR+V GSANLL+DLV
Sbjct: 135 KDLEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLV 194
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
QDG SLL IGPPGVGKTT+IRE+AR+L NDY+KRVMIVDTS+EIGG+GDIPHPGIGNARR
Sbjct: 195 QDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARR 254
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVPNS++QHKVLIEAVENHMPQVIVIDEIGTKLEA+AASTIA+RGIQLVATAHG TIEN
Sbjct: 255 MQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIEN 314
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
LI NPSL++L+GGVQ+VTLGDEEA RRG QKTVLERKGPSTF+C EIVSKTE+RVH SL
Sbjct: 315 LIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSL 374
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKE-FFAETSSDEEDEMMVEDAMEVTEERTG 428
EATVDAIL+GR+PNVEIR+++ G + +EKE F E + D++ E D ++T+E T
Sbjct: 375 EATVDAILAGRLPNVEIRKIKSHGVEVIMEKEPFIDEKTVDKKHEEETLDVSKLTKEET- 433
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+ + + + E L+ LYVYG M+ AV+LTD+ISEA+AL
Sbjct: 434 -VSEVLQTKEITEAESSEKDTLMYLYVYG--------------METAVELTDDISEAEAL 478
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKIN 548
LAL +K++KN I++ A SH IP+Y TKT+S +Q+ KA+RAL+ D+ + SED++
Sbjct: 479 LALQAKIRKNPRIKSFATSHGIPVYVTKTNSGIQVAKAIRALLTDYEDGLGEFGSEDRLK 538
Query: 549 LSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDAR 608
LSEK+DALEEAR+AIE++VIPK E+ +LLPRP I+S+Q L+RKY L +R + +
Sbjct: 539 LSEKMDALEEARLAIERIVIPKKETTDLLPRPPRIVSLQGKLVRKYNLRSERKWRGDEMY 598
Query: 609 LRILPFQTRRDEPRNS-----GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
LRILP+ T D GE E E DE ++ SN + +DRLP LPD
Sbjct: 599 LRILPYSTEEDRDDREDEGEFGEANGE--ELDELGFATGESNDSPSGIDRLPLLPD 652
>gi|326488989|dbj|BAJ98106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/593 (63%), Positives = 448/593 (75%), Gaps = 16/593 (2%)
Query: 72 FDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
FD ELGRLL LLP E+R V +HPEL L+EVVMDLGR PLARFPSGDF LS I+
Sbjct: 69 FDEELGRLLELLPGELRRSVEDHPELPALVEVVMDLGRPPLARFPSGDFLLSHRPISFDD 128
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
+ AT++VGDF DNRAGISRTLHRISAIRNR+G I+GLTCRVGRAV+GSANLLQDLV+
Sbjct: 129 LHQATAKVGDFGGDNRAGISRTLHRISAIRNRQGDIVGLTCRVGRAVAGSANLLQDLVKA 188
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G SLL IGPPGVGKTT+IREIAR+LA+DY KRVMIVDTS+EI G+GDIPHPGIGNARR+Q
Sbjct: 189 GGSLLLIGPPGVGKTTVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQ 248
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VPN EMQHKVLIEAVENHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVA+AHGVTIENL
Sbjct: 249 VPNQEMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLT 308
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
MNPSL+ML+GG+Q+VTLGDEEA RR VQKTVLERKGPSTF+ AVEIVSKTELRVH SLEA
Sbjct: 309 MNPSLDMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFAYAVEIVSKTELRVHRSLEA 368
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQ 431
TVDA+L+GR+PNVEIR++ GS +V++E + D + EV +
Sbjct: 369 TVDALLAGRMPNVEIRKL---GSTGSVQQEVSVQKDQFRRDPYKIVSQFEVASLSNARTS 425
Query: 432 FISEFPPNIGEDCWEDGLL----IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADA 487
S F + E+ + LYVYGI E +Q IKQL+++D + LT NISEADA
Sbjct: 426 LDSAFNLDSANGHIENSNVSEAGFNLYVYGISEEIALQAIKQLELEDMITLTYNISEADA 485
Query: 488 LLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI 547
++AL SKLKKNS IQA KS DIP++ KT+SLVQIT+ALR L+DDH D+ + ++
Sbjct: 486 VIALQSKLKKNSQIQALLKSEDIPVFFAKTNSLVQITRALRVLVDDHVDGLIDVEDKVEV 545
Query: 548 NLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDA 607
SE+ DALEEAR+A+EQVVIPKGESV+LLPRPS I+S Q++L++ + L ++ G+EP+A
Sbjct: 546 RSSEETDALEEARLAVEQVVIPKGESVQLLPRPSTIISYQVNLVKSFNLKWEVTGQEPNA 605
Query: 608 RLRILP-FQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
LRILP F R + ET + + GSS + RLPFLP+
Sbjct: 606 CLRILPQFADREQVAASEQETSETAPGLTDSDGSSG--------LTRLPFLPE 650
>gi|194707358|gb|ACF87763.1| unknown [Zea mays]
Length = 554
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/567 (65%), Positives = 432/567 (76%), Gaps = 25/567 (4%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATS--QVGDFAVDNRAGISRTLHRISAIRN 162
MDLGR PLARFPSGDF LS I+ + HATS QVGDF DNRAGISRTLHRISAIRN
Sbjct: 1 MDLGRPPLARFPSGDFLLSQRPISFDDLRHATSHSQVGDFGADNRAGISRTLHRISAIRN 60
Query: 163 RKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK 222
RKG I+GLTCRVGRAV GSANLLQDLV+DG SLL IGPPGVGKTT+IREIAR+LA+DYKK
Sbjct: 61 RKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKK 120
Query: 223 RVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
RVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +MQHKVLIEAVENHMPQ IVIDEIGTK
Sbjct: 121 RVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTK 180
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTV 342
LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+VTLGDEEA+RRGVQKTV
Sbjct: 181 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQKTV 240
Query: 343 LERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEF 402
LERKGPSTF+CA EIVSK ELRVH SLEATVDA+L+G++PN EIR++ GS + V
Sbjct: 241 LERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNFEIRKLGSKGSMQEV---- 296
Query: 403 FAETSSDEEDEMMVEDAMEVTEE--RTGKIQFISEFPPNIGED--CWEDGL--LIRLYVY 456
+ E+ + + DA E + R + S F + E DG LY Y
Sbjct: 297 ---SVQKEQSHLGIYDATEFGSDSLRNARRSLDSAFSLDSAEGHIVRSDGADSSFNLYAY 353
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
GI E+T +Q I QL++DD+V LT NISEADA++ALHSKLKKN IQA KS DIP++ K
Sbjct: 354 GISESTALQAIHQLELDDSVTLTYNISEADAVIALHSKLKKNYQIQAVLKSQDIPVFLVK 413
Query: 517 TSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVEL 576
T+SL QIT+ALRAL+DDH E D +++ SE+ DALEEAR+AIEQVVIPKGESV+L
Sbjct: 414 TNSLPQITRALRALVDDHMDEVIDYNDKEEARSSEETDALEEARLAIEQVVIPKGESVQL 473
Query: 577 LPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP-FQTRRDEP---RNSGETFDEDI 632
LPRPS I+S Q+ L+ + L ++ VG+EP A +RILP F ++ E E D D
Sbjct: 474 LPRPSSIISSQVGLVESFSLKWEVVGQEPKACVRILPHFAPKQVEAVARETPAEPADSDW 533
Query: 633 EFDEFPGSSSNSNGTRYTVDRLPFLPD 659
E S +S+ T+ + RLPFLPD
Sbjct: 534 E------SHDDSDHTQSGITRLPFLPD 554
>gi|357125252|ref|XP_003564309.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 650
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/579 (63%), Positives = 437/579 (75%), Gaps = 26/579 (4%)
Query: 90 RVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAG 149
RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HAT++VGDF DNRAG
Sbjct: 89 RVEGHPELPALVEVVMDLGRPPLARFPSGDFLLSHRPISFDELHHATAKVGDFGGDNRAG 148
Query: 150 ISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTII 209
ISRTLHRISAIRNRKG I+GLTCRVGRAV GSA LLQDLV+DG SLL IGPPGVGKTT+I
Sbjct: 149 ISRTLHRISAIRNRKGDIVGLTCRVGRAVPGSAILLQDLVKDGGSLLLIGPPGVGKTTVI 208
Query: 210 REIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENH 269
REIAR+LA+DYKKRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN EMQHKVLIEAVENH
Sbjct: 209 REIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQEMQHKVLIEAVENH 268
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLG 329
MPQ IVIDEIGTKLEAMAASTIAQRGIQLVA+AHGVTIENL MNPSLEML+GG+Q+VTLG
Sbjct: 269 MPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLTMNPSLEMLVGGIQSVTLG 328
Query: 330 DEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRM 389
DEEA+RR VQKTVLERKGPSTF+ AVEIVSKTELRVH SLEATVDA+L+GR+PNVEIR++
Sbjct: 329 DEEANRRRVQKTVLERKGPSTFTYAVEIVSKTELRVHRSLEATVDALLAGRLPNVEIRKL 388
Query: 390 QHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGE------D 443
GS +V+KE + + E + S F + E +
Sbjct: 389 ---GSNMSVQKEVSVQKEQFHRGSFQIGPEFEADSLSNARTSLDSAFHLDSAEGHIEKFN 445
Query: 444 CWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQA 503
E+G LY YGI E T +Q IKQL+++D V LT NISEADA++AL SKLKKNS IQA
Sbjct: 446 ESEEGF--NLYAYGISEETALQAIKQLELEDMVTLTYNISEADAVIALQSKLKKNSQIQA 503
Query: 504 AAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAI 563
A KS DIP++ KT+SLVQIT+ALR L+DD E D ++++ SE+ DALEEAR+A+
Sbjct: 504 AVKSQDIPVFFVKTNSLVQITRALRVLVDDLMDELMDFEDKEEVRSSEEADALEEARLAV 563
Query: 564 EQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRN 623
EQVVIPKGES +LLPRP I+S Q +L+ ++L ++ +G+EP+ L+ILP T +E +
Sbjct: 564 EQVVIPKGESAQLLPRPRSIISSQANLVESFKLRWEVIGQEPNVCLKILPQFTDTEEGTS 623
Query: 624 SGETFDEDIEFDEFPGSSSNSNG---TRYTVDRLPFLPD 659
+ T SS+S+G V RLPFLP+
Sbjct: 624 TKLT------------DSSSSDGMGRAEDVVTRLPFLPE 650
>gi|145327231|ref|NP_001077817.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197302|gb|AEE35423.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 538
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/527 (63%), Positives = 412/527 (78%), Gaps = 10/527 (1%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
VG+F DNRAGISRTLHRISAIRNRKG IIGLTCRVGR+V GSANLL+DLVQDG SLL I
Sbjct: 16 VGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSLLLI 75
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
GPPGVGKTT+IRE+AR+L NDY+KRVMIVDTS+EIGG+GDIPHPGIGNARRMQVPNS++Q
Sbjct: 76 GPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQ 135
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
HKVLIEAVENHMPQVIVIDEIGTKLEA+AASTIA+RGIQLVATAHG TIENLI NPSL++
Sbjct: 136 HKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDL 195
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GGVQ+VTLGDEEA RRG QKTVLERKGPSTF+C EIVSKTE+RVH SLEATVDAIL+
Sbjct: 196 LVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILA 255
Query: 379 GRIPNVEIRRMQHDGSKETVEKE-FFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFP 437
GR+PNVEIR+++ G + +EKE F E + D++ E D ++T+E T + + +
Sbjct: 256 GRLPNVEIRKIKSHGVEVIMEKEPFIDEKTVDKKHEEETLDVSKLTKEET--VSEVLQTK 313
Query: 438 PNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
+ E L+ LYVYGI E+TV+Q IKQL+M+ AV+LTD+ISEA+ALLAL +K++K
Sbjct: 314 EITEAESSEKDTLMYLYVYGIAESTVLQAIKQLEMETAVELTDDISEAEALLALQAKIRK 373
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALE 557
N I++ A SH IP+Y TKT+S +Q+ KA+RAL+ D+ + SED++ LSEK+DALE
Sbjct: 374 NPRIKSFATSHGIPVYVTKTNSGIQVAKAIRALLTDYEDGLGEFGSEDRLKLSEKMDALE 433
Query: 558 EARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTR 617
EAR+AIE++VIPK E+ +LLPRP I+S+Q L+RKY L +R + + LRILP+ T
Sbjct: 434 EARLAIERIVIPKKETTDLLPRPPRIVSLQGKLVRKYNLRSERKWRGDEMYLRILPYSTE 493
Query: 618 RDEPRNS-----GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
D GE E E DE ++ SN + +DRLP LPD
Sbjct: 494 EDRDDREDEGEFGEANGE--ELDELGFATGESNDSPSGIDRLPLLPD 538
>gi|413942920|gb|AFW75569.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 572
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/435 (70%), Positives = 346/435 (79%), Gaps = 15/435 (3%)
Query: 90 RVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS--QVGDFAVDNR 147
RV HPEL L+EVVMDLGR PLARFPSGDF LS I+ + HATS QVGDF DNR
Sbjct: 93 RVETHPELPALVEVVMDLGRPPLARFPSGDFLLSQRPISFDDLRHATSHSQVGDFGADNR 152
Query: 148 AGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTT 207
AGISRTLHRISAIRNRKG I+GLTCRVGRAV GSANLLQDLV+DG SLL IGPPGVGKTT
Sbjct: 153 AGISRTLHRISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTT 212
Query: 208 IIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVE 267
+IREIAR+LA+DYKKRVMIVDTS+EIGG+GDIPHPGIGNARR+QVPN +MQHKVLIEAVE
Sbjct: 213 VIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVE 272
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVT 327
NHMPQ IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML+GG+Q+VT
Sbjct: 273 NHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVT 332
Query: 328 LGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIR 387
LGDEEA+RRGVQKTVLERKGPSTF+CA EIVSK ELRVH SLEATVDA+L+G++PN EIR
Sbjct: 333 LGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNFEIR 392
Query: 388 RMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE--RTGKIQFISEFPPNIGED-- 443
++ GS + V + E+ + + DA E + R + S F + E
Sbjct: 393 KLGSKGSMQEVSVQ-------KEQSHLGIYDATEFGSDSLRNARRSLDSAFSLDSAEGHI 445
Query: 444 CWEDGL--LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGI 501
DG LY YGI E+T +Q I QL++DD+V LT NISEADA++ALHSKLKKN I
Sbjct: 446 VRSDGADSSFNLYAYGISESTALQAIHQLELDDSVTLTYNISEADAVIALHSKLKKNYQI 505
Query: 502 QAAAKSHDIPIYATK 516
QA KS DIP++ K
Sbjct: 506 QAVLKSQDIPVFLVK 520
>gi|255585357|ref|XP_002533375.1| ATP binding protein, putative [Ricinus communis]
gi|223526782|gb|EEF29006.1| ATP binding protein, putative [Ricinus communis]
Length = 693
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 329/673 (48%), Positives = 441/673 (65%), Gaps = 29/673 (4%)
Query: 4 FSLFHTSFLIPRCTQCKLQASTFKHT---HFPYLRSSPNSTFFIEEFSGFRSKFSSVLFS 60
S F +SF R K+ +S H P +R P + I S S +SVL S
Sbjct: 31 LSTFSSSFRRTRGVHRKISSSKSSTPSAIHTPEVRR-PTDRYKIRNGSQSESG-NSVLVS 88
Query: 61 DSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDF 120
S SV + EL L LLP MR + E+ ELIEVV+DLGRKPLARFPSGD+
Sbjct: 89 TG--SSSVPNS---ELDSFLELLPLRMRRELCNQNEIGELIEVVLDLGRKPLARFPSGDW 143
Query: 121 SLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSG 180
+S+ + ++HA S+VGDF+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRAVSG
Sbjct: 144 VISEQPVKHEDLKHAISKVGDFSDDNRSGINSSLHRISAIRNRKMQIIGLTCRVGRAVSG 203
Query: 181 SANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIP 240
SA +++DLV+ G S+L IGPPGVGKTT+IREIAR+LA+D KRV+IVDTS+EIGG+GD+P
Sbjct: 204 SAEIIRDLVEGGGSILAIGPPGVGKTTLIREIARMLADDQGKRVVIVDTSNEIGGDGDVP 263
Query: 241 HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
H GIG ARRMQVPN MQH V+IEAVENHMPQ I+IDEIGT+LEA+AASTIAQRG+QLV
Sbjct: 264 HAGIGRARRMQVPNVNMQHNVMIEAVENHMPQAIIIDEIGTELEALAASTIAQRGVQLVG 323
Query: 301 TAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSK 360
TAHG+TI+N+I NPSL++L+GG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+
Sbjct: 324 TAHGMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISR 383
Query: 361 TELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAM 420
TE RVHH L+ATVD ILSG+ P EIR M +G +E + ++++
Sbjct: 384 TECRVHHRLDATVDTILSGKTPLFEIRHMDTEGDDSLKFTPMNGNNLVEESEPVIIKKGD 443
Query: 421 EV-TEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLT 479
E+ ++E G I + + +Y Y ILEA ++Q+ + ++D ++LT
Sbjct: 444 EIDSDEENGYTPSIYFKKHKTRGYVKQRSSPVCIYTYKILEAHLLQVAMVMGLEDEIELT 503
Query: 480 DNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI--DDHTGE 537
D+I ADA+LA S++K+N I+ AK H +P++ K+++L Q+ KA+R ++ + +
Sbjct: 504 DDIETADAILASSSEMKQNPWIRGVAKFHHLPVFVIKSNTLAQMVKAIRMILGFESFGSK 563
Query: 538 FK-------DLRSED-----KINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILS 585
K D+ ED K L E+IDALEE R+AIE +VIP GE VELLPR S I++
Sbjct: 564 LKQPLKNSLDIEIEDDAPKRKPTL-EEIDALEEVRLAIEYIVIPGGEPVELLPRCSEIIA 622
Query: 586 IQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSN 645
Q++L+ YQL + G E RL+ILP +T + ++ + E + S
Sbjct: 623 RQLELVESYQLTAENSGTELSPRLQILPLRTNKKTSKSQKSCATSEKETN---SKSLTGM 679
Query: 646 GTRYTVDRLPFLP 658
G +V RLPFLP
Sbjct: 680 GGGTSVSRLPFLP 692
>gi|302807180|ref|XP_002985303.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
gi|300147131|gb|EFJ13797.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
Length = 563
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/588 (51%), Positives = 401/588 (68%), Gaps = 41/588 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +LL++LPE + V HP+L E++E+V+DLGR+P+ARFPSGD+S+S +T+ +E
Sbjct: 7 ELQQLLSVLPERLERSVQNHPQLEEIVEIVLDLGRRPIARFPSGDWSMSQEPVTIADLED 66
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A VGDF DNRAGI RTLHRISAIRNR G I+GLTCRVGRAV+GSA + +DLV GAS
Sbjct: 67 AICMVGDFVDDNRAGIDRTLHRISAIRNRGGRIVGLTCRVGRAVTGSAEMARDLVSSGAS 126
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +GPPGVGKTT IRE+AR+LA+DY +RV+IVDTS+EI G+GDIPHPGIG ARRMQV N
Sbjct: 127 LLLMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTN 186
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+QHK++IEAVENHMP+ IVIDEIGT+LEA AA TIAQRG+QLVATAHG ++ENLI NP
Sbjct: 187 VGLQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNP 246
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
SLE+L+GG+Q+VTLGD+EA RRGVQK+VLERKGP FS A+E+ S+TE R+HHSL AT+D
Sbjct: 247 SLEILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATID 306
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
A+L+GR P++EIR M+ E + ++E+D K+Q
Sbjct: 307 ALLAGRSPSIEIRNMKDKEGTAPEELPVLNQIENEEKDVFK-------------KLQ--- 350
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
D + L LY Y I E + Q I+ L++++ + + +I ADA+L L SK
Sbjct: 351 --------DNGSESKLFSLYPYQISEEFLKQAIEVLELEETIGVASDIGAADAVLTLRSK 402
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLR----SEDKINLS 550
L++N ++ AK +P++A K ++L Q+ +A RA++ E + LR S K +
Sbjct: 403 LRENVWVRNIAKFRQLPVFAIKANTLAQMIRATRAVL-----EMEMLRGTSSSTRKSKVE 457
Query: 551 EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLR 610
++IDALEEAR+AIEQ+VI KG++VELLPR + I ++QI L YQL + G EP RLR
Sbjct: 458 DEIDALEEARLAIEQIVIAKGQAVELLPRSAGITALQIRLAESYQLASETSGIEPKVRLR 517
Query: 611 ILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLP 658
ILP + +S E+ G +S V +LP LP
Sbjct: 518 ILPLLQQGSRQSSSINNTKEESSQGRVQGGTS--------VSKLPLLP 557
>gi|414591924|tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea mays]
Length = 696
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 314/626 (50%), Positives = 427/626 (68%), Gaps = 52/626 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L ++P MR ++ H EL +L+EV+MDLGR+P+ARFPSGD+++SD +T +
Sbjct: 80 ELEAFLEIVPARMRRGLARHQELRDLVEVIMDLGRRPIARFPSGDWAISDQPVTADDLRQ 139
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A ++VGDF+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S
Sbjct: 140 AVAKVGDFSEDNRSGINHSLHRISAIRNRKAQIIGLTCRVGRAISGSAEMIRDLVVSGGS 199
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG ARRMQVP
Sbjct: 200 ILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRARRMQVPK 259
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+VIVIDEIGT+LEAMAA+TIAQRG+QLV TAHGVTIE++I NP
Sbjct: 260 VTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIESIIKNP 319
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L+ML+GG+++VTLGDEEA +R VQKT+LERKGP TF CAVE++SKTE RVHH L+ATVD
Sbjct: 320 CLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRLDATVD 379
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
AIL+G+ P E R+M H+ S E + + E + ++ M VT + F
Sbjct: 380 AILAGKPPKFEARKM-HNKSTEFEMPLVIPDREYEIESLPLYQEVM-VTRSLSSDGNFSD 437
Query: 435 EFPPN--------IGEDCWEDGL----------------LIRLYVYGILEATVVQLIKQL 470
+F + ED + D L+++Y Y I EA ++Q+ +
Sbjct: 438 DFAASRQTKSKSMPSEDNFGDNFVYTRKAKGNKPVHGKSLVQVYTYQISEADILQVATMM 497
Query: 471 QMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
DD + +TD+I AD +LA S++K+N I AK H +PI+ KT+++ QI KA+R +
Sbjct: 498 GFDDELDVTDDIGAADVILASSSEMKQNPWIHNVAKYHKLPIFVVKTNTMAQIVKAIRMI 557
Query: 531 ID-DHTG------------EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
+ D+T E +D + K +L E+IDALEEAR+AIE +VIP GE VELL
Sbjct: 558 VGRDNTSSSKQPEVMEGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYIVIPGGEPVELL 616
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSGETFDEDIEFDE 636
PR S I++ Q++L+ YQL + G + ++RL+ILP + T+R +++G + + +
Sbjct: 617 PRCSEIVARQLELVESYQLLAETFGSDSNSRLQILPMKITKRGSSKDNGAS-----KPTK 671
Query: 637 FPGS----SSNSNGTRYTVDRLPFLP 658
GS S N G+ ++ RLPFLP
Sbjct: 672 QTGSDLIVSENGGGSSFS--RLPFLP 695
>gi|357111296|ref|XP_003557450.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 707
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/626 (50%), Positives = 422/626 (67%), Gaps = 50/626 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L ++P MR ++ HPE+ EL+EVVMDLGR+PLARFPSGD+ +SD +T +
Sbjct: 89 ELEAFLEVVPARMRRDLAMHPEVRELVEVVMDLGRRPLARFPSGDWVISDQPVTADDLRQ 148
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VG+F+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S
Sbjct: 149 AVSKVGNFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGS 208
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG +RRMQVP
Sbjct: 209 ILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPK 268
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+VIVIDEIGT+LEA+AASTIAQRG+QLV TAHGVTIE++I NP
Sbjct: 269 VTMQHNVMIEAVENHMPEVIVIDEIGTELEALAASTIAQRGVQLVGTAHGVTIESIIKNP 328
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L+ML+GG+++VTLGDEEA +R VQKT+LERKGP TFSCAVE+VSKTE RVHH LE TVD
Sbjct: 329 CLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHHKLETTVD 388
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAME-VTEERTGKIQFI 433
AIL+G+ P E R M SK T F + E E + VT T + QF+
Sbjct: 389 AILAGKPPKFEARVMD---SKATEPGASFVIPEMEYEMEPLPSCQEHLVTRTITSEDQFV 445
Query: 434 SEF-------PPNIGEDCWEDG-----------------LLIRLYVYGILEATVVQLIKQ 469
+F ++ D + DG +R+Y Y + E+ V+Q+
Sbjct: 446 DDFGSTRQTKSKSVPSDDYLDGHSGYTKKTKGKTYAAERPPVRVYTYQVSESDVLQVASV 505
Query: 470 LQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRA 529
+ DD +++TD+I A+ +LA S++K+N I+ AK H +PI+ KT+++ QI KA++
Sbjct: 506 MGFDDELEITDDIGAANVILASSSEMKQNPWIRNVAKYHKLPIFVVKTNTMAQIVKAVKM 565
Query: 530 LID---------------DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
++ + E D + K +L E+IDALEEAR+AIE +VIP GE V
Sbjct: 566 IVGRDKLNAPSRKQPKVLEGEIEIDDDAPKRKPSL-EEIDALEEARLAIEYIVIPGGEPV 624
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNS-GETFDEDI 632
ELLPR S I++ Q++L+ YQL + G +P++RL+ILP + T++ + + G+T
Sbjct: 625 ELLPRCSEIVARQLELVESYQLLAETFGTDPNSRLQILPVKITKKSSSQGAQGQTSTNKS 684
Query: 633 EFDEFPGSSSNSNGTRYTVDRLPFLP 658
D N NG ++ RLPFLP
Sbjct: 685 ASDLI----VNENGGGFSFSRLPFLP 706
>gi|242047690|ref|XP_002461591.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
gi|241924968|gb|EER98112.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
Length = 628
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/627 (50%), Positives = 427/627 (68%), Gaps = 52/627 (8%)
Query: 74 IELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+EL L ++P MR ++ H E+ L+EVVMDLGR+P+ARFPSGD+ +SD +T +
Sbjct: 11 VELEAFLEVVPARMRRGLALHQEVRHLVEVVMDLGRRPIARFPSGDWVISDQVVTADDLL 70
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
A ++VGDF+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G
Sbjct: 71 QAVAKVGDFSEDNRSGINHSLHRISAIRNRKAQIIGLTCRVGRAISGSAEMIRDLVVGGG 130
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
S+L IGPPGVGKTT+IREIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG ARRMQVP
Sbjct: 131 SILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRARRMQVP 190
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
MQH V+IEAVENHMP+VIVIDEIGT+LEAMAASTIAQRG+QLV TAHGVTIE++I N
Sbjct: 191 KVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKN 250
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATV 373
P L+ML+GG+++VTLGDEEA +R VQKT+LERKGP TFSCAVE++SKTE RVHH L+ATV
Sbjct: 251 PCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLDATV 310
Query: 374 DAILSGRIPNVEIRRMQHDGSKET------VEKEFFAETSSDEEDEMMVED-------AM 420
DAIL+G+ P E R+M H+ S E+ ++E+ E+ +++M+ + +
Sbjct: 311 DAILAGKPPKFEARKM-HNKSTESEMPLVIPDREYEIESLPLYQEDMVTKSISLEGNLSE 369
Query: 421 EVTEERTGKIQFISEFPPNIGED-----------CWEDGLLIRLYVYGILEATVVQLIKQ 469
+ R KI+ + N G+D L+R+Y Y I EA ++Q+
Sbjct: 370 DFAASRQTKIKSMPS-DDNFGDDFVYTRKAKGKKSVPGKALVRVYTYQISEADILQVATV 428
Query: 470 LQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRA 529
+ DD + +TD+I AD +LA S++K+N I AK H +PI+ KT+++ QI KA+R
Sbjct: 429 MGFDDELDVTDDIGAADVILASSSEMKQNPWIHNVAKYHKLPIFVVKTNTMAQIVKAIRM 488
Query: 530 LI--DDHTGEFKDLRSEDKINLS----------EKIDALEEARVAIEQVVIPKGESVELL 577
++ D+ + + E +I + E+IDALEEAR+AIE +VIP GE VELL
Sbjct: 489 IVGRDNRSSSKQPKVMEGEIEIEDDAPIRKPSLEEIDALEEARLAIEYIVIPGGEPVELL 548
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSG-----ETFDED 631
PR S I++ Q++L+ YQL + G + + RL+ILP + T++ +++G + D
Sbjct: 549 PRCSEIVARQLELVESYQLLAETFGSDSNPRLQILPVKITKKGSSKDNGVSKPTKQTGSD 608
Query: 632 IEFDEFPGSSSNSNGTRYTVDRLPFLP 658
+ E G SS S RLPFLP
Sbjct: 609 LIVSENGGGSSFS--------RLPFLP 627
>gi|302773391|ref|XP_002970113.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
gi|300162624|gb|EFJ29237.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
Length = 736
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/544 (54%), Positives = 389/544 (71%), Gaps = 33/544 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +LL++LPE + V HP+L E++E+V+DLGR+P+ARFPSGD+S+S +T+ +E
Sbjct: 32 ELQQLLSVLPERLERSVQNHPQLEEIVEIVLDLGRRPIARFPSGDWSISQEPVTIADLED 91
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A VGDFA DNRAGI RTLHRISAIRNR G I+GLTCRVGRAV+GSA + +DLV GAS
Sbjct: 92 AICMVGDFADDNRAGIDRTLHRISAIRNRGGRIVGLTCRVGRAVTGSAEMARDLVSSGAS 151
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +GPPGVGKTT IRE+AR+LA+DY +RV+IVDTS+EI G+GDIPHPGIG ARRMQV N
Sbjct: 152 LLLMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTN 211
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+QHK++IEAVENHMP+ IVIDEIGT+LEA AA TIAQRG+QLVATAHG ++ENLI NP
Sbjct: 212 VGLQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNP 271
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
SLE+L+GG+Q+VTLGD+EA RRGVQK+VLERKGP FS A+E+ S+TE R+HHSL AT+D
Sbjct: 272 SLEILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATID 331
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
A+L+GR P++EIR M+ E + ++++D F
Sbjct: 332 ALLAGRSPSIEIRNMKDKEGTAPEELPVLNQIENEDKD-------------------FFK 372
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
+ +D +G L LY Y I E + Q I+ L++++ + + +I ADA+L L SK
Sbjct: 373 KL-----QDNGSEGKLFSLYPYQISEELLKQAIEVLELEETIGVASDIGAADAVLTLRSK 427
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLR----SEDKINLS 550
L++N ++ AK +P++A K ++L Q+ +A RA++ E + LR S K +
Sbjct: 428 LRENVWVRNIAKFRQLPVFAIKANTLAQMIRATRAVL-----EMEMLRGTSSSTRKSKVE 482
Query: 551 EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLR 610
++IDALEEAR+AIEQ+VI KG++VELLPR + I ++QI L YQL + G EP RLR
Sbjct: 483 DEIDALEEARLAIEQIVIAKGQAVELLPRSAGITALQIRLAESYQLASETSGIEPKVRLR 542
Query: 611 ILPF 614
ILP
Sbjct: 543 ILPL 546
>gi|356575518|ref|XP_003555887.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 667
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/599 (51%), Positives = 418/599 (69%), Gaps = 39/599 (6%)
Query: 86 EMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVD 145
+MR + H E+ LIE+VMDLGRKPLARFPSGD+ +S+ I + HA S+VG+F+ D
Sbjct: 83 KMRRELYRHREIGGLIEIVMDLGRKPLARFPSGDWVISEQPIAQEDLRHAISKVGEFSDD 142
Query: 146 NRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGK 205
NR+GI R+LHRISAIRNRK IIGLTCRVGRAV GSA +++DLV+DG S+L IGPPGVGK
Sbjct: 143 NRSGIDRSLHRISAIRNRKMQIIGLTCRVGRAVGGSAEIIRDLVEDGGSILVIGPPGVGK 202
Query: 206 TTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
TT+IREIAR+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARRMQVPN MQH V+IEA
Sbjct: 203 TTLIREIARMLADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNVMIEA 262
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN 325
VENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLV TAHG+TIEN+I NP L++L+GG+++
Sbjct: 263 VENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILVGGIES 322
Query: 326 VTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVE 385
VTLGDEEA +R VQKT+LERKGP TFSCAVE++SKTE RVHH L+ATVDAIL+G+ P E
Sbjct: 323 VTLGDEEARKRKVQKTILERKGPPTFSCAVEMISKTECRVHHRLDATVDAILAGKPPLFE 382
Query: 386 IRRMQHDGSKETVEK------EFFAETSSDEEDEMMVEDAMEVTEE-----RTGKIQFIS 434
IR Q D S + K E ETS + + D E +E+ RT ++ +
Sbjct: 383 IR--QWDDSDNELPKYAPLPEENLGETSDLTNNNITSSDN-EPSEDDKDHPRTWSTKWST 439
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
P +++Y Y ILEA ++Q+ K + ++D + +TD+I A+A+LA S+
Sbjct: 440 SGP------VMTRSSPMQVYTYKILEADLLQVAKVMGLEDVIDVTDDIGTAEAILASSSE 493
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHT---------GEFKDLRSED 545
+++N I+ AK H +P++ K++++ Q+ KA+R ++ + E D+ ED
Sbjct: 494 IRQNPWIRGVAKFHHVPVFVIKSNTMAQMVKAVRMILGLESFGPTPKKPLNECLDIEIED 553
Query: 546 -----KINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQR 600
K +L E+IDALEE R+AIE +VIP GE+VELLPR S I++ Q++L++ YQL ++
Sbjct: 554 DEPKRKPSL-EEIDALEEVRLAIEYIVIPGGEAVELLPRRSEIIARQLELVQSYQLAAEK 612
Query: 601 VGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
G + + RL+ILP R + + S T + + NGT +V RLP LP+
Sbjct: 613 SGTDQNPRLQILPL--RLNTKKASKSTVARKKTSPTSMSTGDSGNGT--SVTRLPILPE 667
>gi|326513988|dbj|BAJ92144.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523339|dbj|BAJ88710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 416/634 (65%), Gaps = 67/634 (10%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
E+ L ++P MR ++ HPE+++L+EVVMDLGR+PLARFPSGD+ +SD +T +
Sbjct: 87 EMEAFLEVVPARMRRELALHPEVWDLVEVVMDLGRRPLARFPSGDWVISDQPVTADDLRQ 146
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VG+F+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S
Sbjct: 147 AVSKVGNFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGS 206
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA++ KRV+IVDTS+EIGG+GD+PH GIG +RRMQVP
Sbjct: 207 ILVIGPPGVGKTTLIREIARILADEGNKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPK 266
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+VIVIDEIGT+LEAMAASTIAQRG+QLV TAHGVTI+++I NP
Sbjct: 267 VTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIDSIIKNP 326
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L+ML+GG+++VTLGDEEA +R VQKT+LERKGP TFSCAVE+VSKTE RVH+ LE+TVD
Sbjct: 327 CLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHYKLESTVD 386
Query: 375 AILSGRIPNVEIRRMQHDGSKE----------------------------TVEKEFFAET 406
AIL+G+ P E R M ++ T E +F +
Sbjct: 387 AILAGKPPKFEARMMNSKAAESGGSLVISERVSESEHLPAYQEDLVTRAVTPEDKFADDF 446
Query: 407 SSDEEDEMMVEDAMEVT-----EERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEA 461
S + + V ++T +++ PP +R+Y Y + EA
Sbjct: 447 GSSRQTNNSIPSGDNVNGDFGYAKKTKGKTYVAGRPP------------VRVYTYQVSEA 494
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
++Q+ + +D + +TD+I A+ +LA S++K+N I+ AK H +PI+ KT+++
Sbjct: 495 DILQVATVMGFEDELDITDDIEAANVILASSSEMKQNPWIRNVAKYHKLPIFVVKTNTMA 554
Query: 522 QITKALRALID---------------DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
QI KA++ ++ + E +D + K +L E+IDALEEAR+AIE +
Sbjct: 555 QIVKAVKMIVGRDKLNAPSRKQPKVLEGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYI 613
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNS-- 624
VIP GE VELLPR S I++ Q++L+ YQL + G +P++RL+ILP + +
Sbjct: 614 VIPGGEPVELLPRCSEIVARQLELVESYQLLAETFGTDPNSRLQILPVKIAKKTSGQGAQ 673
Query: 625 GETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLP 658
G+T + D G NG ++ RLPFLP
Sbjct: 674 GQTSTKKNGSDLIVG----ENGGGFSFSRLPFLP 703
>gi|218199218|gb|EEC81645.1| hypothetical protein OsI_25180 [Oryza sativa Indica Group]
Length = 682
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 421/624 (67%), Gaps = 48/624 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L ++P MR ++ HPE+ EL+EVVMDLGR+PLARFPSGD+ +S+ +T +
Sbjct: 66 ELEAFLEVVPARMRRGLARHPEVRELVEVVMDLGRRPLARFPSGDWVISEQAVTADDLHQ 125
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VGDF+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S
Sbjct: 126 AVSKVGDFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGS 185
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG +RRMQVP
Sbjct: 186 ILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPK 245
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+VIVIDEIGT+LEAMAASTIAQRG+QLV TAHGVTIE++I NP
Sbjct: 246 VSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNP 305
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L++L+GG+++VTLGDEEA +R VQKT+LERKGP TFSCAVE++SKTE RVHH LEATVD
Sbjct: 306 CLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVD 365
Query: 375 AILSGRIPNVEIRRMQH---DGSKETV--EKEF------------FAETSSDEEDEMMVE 417
AIL+G+ P E R+M + + + V E+E+ FA+ E++ +
Sbjct: 366 AILAGKPPKFEARKMDYKVTESGRSLVIPEREYETEPLPSYQEHHFAKAMPSEDN---FD 422
Query: 418 DAMEVTEERTGKIQFISEFPPNIGEDCWEDGLL-------IRLYVYGILEATVVQLIKQL 470
D + + F + G G + +Y Y I EA ++Q+ +
Sbjct: 423 DDFSTRRTESKSVPSNDNFNDDFGSTRKTKGKTSVPGKSPVHVYTYQISEADILQVATVM 482
Query: 471 QMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
DD + +TD+I A+ +LA S++K+N I+ AK H +PI+ KT+++ QI KA+R +
Sbjct: 483 GFDDELDVTDDIGAANVILASSSEMKQNHWIRNVAKYHKLPIFVVKTNTMAQIVKAVRMI 542
Query: 531 ID-DHTG--------------EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
+ D E +D + K +L E+IDALEEAR+AIE +VIP GE VE
Sbjct: 543 VGRDKLNAPTRKQPKVVVGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYIVIPGGEPVE 601
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSGETFDEDIEF 634
LLPR S I++ Q++L+ YQL + G + ++RL+ILP + T++ + S + +
Sbjct: 602 LLPRCSEIVARQLELVESYQLLAETFGTDSNSRLQILPVKITKKSSSKGSAGSMPKQGSS 661
Query: 635 DEFPGSSSNSNGTRYTVDRLPFLP 658
D S N G+ ++ RLPFLP
Sbjct: 662 DLI--VSDNGGGSSFS--RLPFLP 681
>gi|30681308|ref|NP_566373.2| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|332641382|gb|AEE74903.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 684
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/624 (49%), Positives = 421/624 (67%), Gaps = 72/624 (11%)
Query: 74 IELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+EL L +LP R + +H + ELIEVVMDLGRKPLARFPSGD+ +S+ +T +E
Sbjct: 95 VELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPSGDWVISEQPVTHQDLE 154
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
A S+VGDF+ DNR+GI R+LHRISAIRNRK +IGLTCRVGR VSGSA +++DL++ G
Sbjct: 155 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 214
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
S+L IG PGVGKTT+IREIAR+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARRMQVP
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 274
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
N +QH V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLVATAHG+TI+N+I N
Sbjct: 275 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 334
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATV 373
PSL++LIGG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+TE RVH L+ TV
Sbjct: 335 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 394
Query: 374 DAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKI--- 430
DAIL+G+ EIR+++ + D +++ +E EE +
Sbjct: 395 DAILAGKSAPFEIRQIRGE---------------DDVPHKLVTPIPLENLEEEPAPLLNR 439
Query: 431 QFISEFPPNIGEDCWEDGLLIR------------------LYVYGILEATVVQLIKQLQM 472
F+SE + +D ED LLIR +Y Y +LEA ++Q+ + + +
Sbjct: 440 DFVSEL---LSDDEDEDFLLIRSNKARSNTYTSPRSSPVHVYTYNVLEADLLQVAEVMGL 496
Query: 473 DDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL-- 530
DD +++TD++ EAD +LA S+LK+NS I+ AK H +PI+ K++++ Q+ KA+R +
Sbjct: 497 DDEIEVTDDVGEADVILASSSELKQNSSIRRVAKLHKLPIFVIKSTTMAQMVKAVRMILG 556
Query: 531 ---------------IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
+DD E KD E K +L E++DALEE R+AIE +VIP GE VE
Sbjct: 557 RESFGSAPKAIEKSSVDDI--EIKDDAPESKPSL-EELDALEEVRLAIEYIVIPGGEPVE 613
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFD 635
LLPR S I+ Q++L+ YQL + +G + RL+ILP ++ + +S
Sbjct: 614 LLPRRSDIIVRQLELVESYQLAVENLGTHLNPRLQILPRRSTKKTLTSSSPQ-------- 665
Query: 636 EFPGSSSNSNGTRYTVDRLPFLPD 659
S+ S GT T RLPFL D
Sbjct: 666 ---KSADGSMGTTGT--RLPFLKD 684
>gi|359486767|ref|XP_002271948.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
Length = 687
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/599 (49%), Positives = 415/599 (69%), Gaps = 21/599 (3%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L L+P MR + H E+ +LIEVVMDLGRKPLARFPSGD+ +S+ + + ++H
Sbjct: 96 ELDMFLELVPLRMRKELFGHAEIGDLIEVVMDLGRKPLARFPSGDWLISEQIVKLEDLQH 155
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VG+F+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGR+VSGSA +++DLV+ G S
Sbjct: 156 AISKVGEFSDDNRSGINHSLHRISAIRNRKMQIIGLTCRVGRSVSGSAEIVRDLVEGGGS 215
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA+++ KRV+IVDTS+EIGG+GD+PH GIG ARRMQV N
Sbjct: 216 ILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVSN 275
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLV TAHG+TI+N++ NP
Sbjct: 276 VNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIMKNP 335
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
SL++L+GG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+T RVHH L+ATVD
Sbjct: 336 SLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRLDATVD 395
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
AIL+G+ P E+R M D +K A E+ + + + ++E+
Sbjct: 396 AILAGKSPLFELRHM--DAEANISQKPTLASEKKLLEESRITKSEVVESDEKHVHHSPSR 453
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
P + + + + +Y Y ILEA ++Q+ K + ++D + +TD+I ADA+LA S+
Sbjct: 454 SNPWSTDKPVSKQSSAVCVYTYKILEADLLQVAKVMGLEDEIDVTDDIGTADAILASSSE 513
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDH---TGEFKDLRSEDKINLS- 550
LK+ I+ AK H +P++ K++++ Q+ KA+R ++ + K L+S I +
Sbjct: 514 LKQYPWIRGVAKFHQLPVFVIKSNTMAQMVKAVRMILGIESFGSKPKKPLKSSFDIEIED 573
Query: 551 ---------EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRV 601
E+IDALEE R+AIE +VIP GE VELLPR S I++ Q++L+ YQL +
Sbjct: 574 DAPKRKPSLEEIDALEEVRLAIEYIVIPGGEPVELLPRRSDIIARQLELVESYQLAVENS 633
Query: 602 GKEPDARLRILPFQT-RRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
G E + RL+ILP ++ ++ ++S + ++ + G +V RLP LP+
Sbjct: 634 GTELNPRLQILPLRSNKKTTNKSSKSSLQKETNVKPL-----TTGGGGTSVARLPLLPE 687
>gi|222636577|gb|EEE66709.1| hypothetical protein OsJ_23378 [Oryza sativa Japonica Group]
Length = 605
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/612 (50%), Positives = 414/612 (67%), Gaps = 48/612 (7%)
Query: 87 MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDN 146
MR ++ HPE+ EL+EVVMDLGR+PLARFPSGD+ +S+ +T + A S+VGDF+ DN
Sbjct: 1 MRRGLARHPEVRELVEVVMDLGRRPLARFPSGDWVISEQAVTADDLHQAVSKVGDFSEDN 60
Query: 147 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKT 206
R+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S+L IGPPGVGKT
Sbjct: 61 RSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSILVIGPPGVGKT 120
Query: 207 TIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
T+IREIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG +RRMQVP MQH V+IEAV
Sbjct: 121 TLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVSMQHNVMIEAV 180
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNV 326
ENHMP+VIVIDEIGT+LEAMAASTIAQRG+QLV TAHGVTIE++I NP L++L+GG+++V
Sbjct: 181 ENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPCLQVLVGGIESV 240
Query: 327 TLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEI 386
TLGDEEA +R VQKT+LERKGP TFSCAVE++SKTE RVHH LEATVDAIL+G+ P E
Sbjct: 241 TLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVDAILAGKPPKFEA 300
Query: 387 RRMQHDGSKE-----TVEKEF------------FAETSSDEEDEMMVEDAMEVTEERTGK 429
R+M + ++ E+E+ FA+ E++ +D +
Sbjct: 301 RKMDYKATESGRSLVIPEREYETEPLPSYQEHHFAKAMPSEDN---FDDDFSTRRTESKS 357
Query: 430 IQFISEFPPNIGEDCWEDGLL-------IRLYVYGILEATVVQLIKQLQMDDAVQLTDNI 482
+ F + G G + +Y Y I EA ++Q+ + DD + +TD+I
Sbjct: 358 VPSNDNFNDDFGSTRKTKGKTSVPGKSPVHVYTYQISEADILQVATVMGFDDELDVTDDI 417
Query: 483 SEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI--DDHTG---- 536
A+ +LA S++K+N I+ AK H +PI+ KT+++ QI KA+R ++ D
Sbjct: 418 GAANVILASSSEMKQNHWIRNVAKYHKLPIFVVKTNTMAQIVKAVRMIVGRDKLNAPTRK 477
Query: 537 ---------EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQ 587
E +D + K +L E+IDALEEAR+AIE +VIP GE VELLPR S I++ Q
Sbjct: 478 QPKVVVGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYIVIPGGEPVELLPRCSEIVARQ 536
Query: 588 IDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSGETFDEDIEFDEFPGSSSNSNG 646
++L+ YQL + G + ++RL+ILP + T++ + S + + D S N G
Sbjct: 537 LELVESYQLLAETFGTDSNSRLQILPVKITKKSSSKGSAGSMPKQGSSDLI--VSDNGGG 594
Query: 647 TRYTVDRLPFLP 658
+ ++ RLPFLP
Sbjct: 595 SSFS--RLPFLP 604
>gi|33146924|dbj|BAC79945.1| ATPase-like protein [Oryza sativa Japonica Group]
gi|50509453|dbj|BAD31071.1| ATPase-like protein [Oryza sativa Japonica Group]
Length = 707
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/632 (49%), Positives = 420/632 (66%), Gaps = 56/632 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L ++P MR ++ HPE+ EL+EVVMDLGR+PLARFPSGD+ +S+ +T +
Sbjct: 83 ELEAFLEVVPARMRRGLARHPEVRELVEVVMDLGRRPLARFPSGDWVISEQAVTADDLHQ 142
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VGDF+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGRA+SGSA +++DLV G S
Sbjct: 143 AVSKVGDFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGS 202
Query: 195 LLFIGPPGVGKTTII--------REIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
+L IGPPGVGKTT+I REIAR+LA++ KKRV+IVDTS+EIGG+GD+PH GIG
Sbjct: 203 ILVIGPPGVGKTTLISLRCFQQYREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGR 262
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
+RRMQVP MQH V+IEAVENHMP+VIVIDEIGT+LEAMAASTIAQRG+QLV TAHGVT
Sbjct: 263 SRRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVT 322
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVH 366
IE++I NP L++L+GG+++VTLGDEEA +R VQKT+LERKGP TFSCAVE++SKTE RVH
Sbjct: 323 IESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVH 382
Query: 367 HSLEATVDAILSGRIPNVEIRRMQHDGSKE-----TVEKEF------------FAETSSD 409
H LEATVDAIL+G+ P E R+M + ++ E+E+ FA+
Sbjct: 383 HKLEATVDAILAGKPPKFEARKMDYKATESGRSLVIPEREYETEPLPSYQEHHFAKAMPS 442
Query: 410 EEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLL-------IRLYVYGILEAT 462
E++ +D + + F + G G + +Y Y I EA
Sbjct: 443 EDN---FDDDFSTRRTESKSVPSNDNFNDDFGSTRKTKGKTSVPGKSPVHVYTYQISEAD 499
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
++Q+ + DD + +TD+I A+ +LA S++K+N I+ AK H +PI+ KT+++ Q
Sbjct: 500 ILQVATVMGFDDELDVTDDIGAANVILASSSEMKQNHWIRNVAKYHKLPIFVVKTNTMAQ 559
Query: 523 ITKALRALID-DHTG--------------EFKDLRSEDKINLSEKIDALEEARVAIEQVV 567
I KA+R ++ D E +D + K +L E+IDALEEAR+AIE +V
Sbjct: 560 IVKAVRMIVGRDKLNAPTRKQPKVVVGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYIV 618
Query: 568 IPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSGE 626
IP GE VELLPR S I++ Q++L+ YQL + G + ++RL+ILP + T++ + S
Sbjct: 619 IPGGEPVELLPRCSEIVARQLELVESYQLLAETFGTDSNSRLQILPVKITKKSSSKGSAG 678
Query: 627 TFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLP 658
+ + D S N G+ ++ RLPFLP
Sbjct: 679 SMPKQGSSDLI--VSDNGGGSSFS--RLPFLP 706
>gi|297829570|ref|XP_002882667.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
gi|297328507|gb|EFH58926.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/621 (49%), Positives = 422/621 (67%), Gaps = 66/621 (10%)
Query: 74 IELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+EL L +LP R + +H + ELIEVVMDLGRKPLARFPSGD+ +S+ +T +E
Sbjct: 99 VELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPSGDWVISEQPVTHQDLE 158
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
A S+VGDF+ DNR+GI R+LHRISAIRNRK +IGLTCRVGR VSGSA +++DL++ G
Sbjct: 159 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 218
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
S+L IG PGVGKTT+IREIAR+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARRMQVP
Sbjct: 219 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 278
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
N +QH V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLVATAHG+TI+N+I N
Sbjct: 279 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 338
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATV 373
PSL++LIGG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+TE RVH L+ TV
Sbjct: 339 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 398
Query: 374 DAILSGRIPNVEIRRMQHDGSK----------ETVEKE--------FFAETSSDEEDEMM 415
DAIL+G+ EIR+++ + E VE+E F +E SD+ED
Sbjct: 399 DAILAGKSALFEIRQIRGEDDVPHKLVTPIPLERVEEEPAPLLNRDFASEVLSDDED--- 455
Query: 416 VEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDA 475
ED + + + + S P + +Y Y +LEA ++Q+ + + +DD
Sbjct: 456 -EDFLPIRYNKASSNTYKS---PRSSP--------VHVYTYNVLEADLLQVAEVMGLDDE 503
Query: 476 VQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL----- 530
+++TD++ EAD +LA S+LK+NS I+ AK H +PI+ K++++ Q+ KA+R +
Sbjct: 504 IEVTDDVGEADVILASSSELKQNSSIRRVAKLHKLPIFVIKSTTMAQMVKAVRMILGRES 563
Query: 531 ------------IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLP 578
+DD E KD E K +L E++DALEE R+AIE +VIP GE VELLP
Sbjct: 564 FGSAPENIEKSYVDDI--EIKDDAPESKPSL-EELDALEEVRLAIEYIVIPGGEPVELLP 620
Query: 579 RPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFDEFP 638
R S I+ Q++L+ YQL + +G + RL+ILP RR + + +
Sbjct: 621 RRSDIIVRQLELVESYQLAVENLGTHLNPRLQILP---RRSTKKTLSSSSPQK------- 670
Query: 639 GSSSNSNGTRYTVDRLPFLPD 659
++ +S GT T RLPFL D
Sbjct: 671 -AADDSMGTTGT--RLPFLKD 688
>gi|308081617|ref|NP_001183219.1| uncharacterized protein LOC100501605 [Zea mays]
gi|238010124|gb|ACR36097.1| unknown [Zea mays]
Length = 587
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/596 (50%), Positives = 408/596 (68%), Gaps = 52/596 (8%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MDLGR+P+ARFPSGD+++SD +T + A ++VGDF+ DNR+GI+ +LHRISAIRNRK
Sbjct: 1 MDLGRRPIARFPSGDWAISDQPVTADDLRQAVAKVGDFSEDNRSGINHSLHRISAIRNRK 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
IIGLTCRVGRA+SGSA +++DLV G S+L IGPPGVGKTT+IREIAR+LA++ KKRV
Sbjct: 61 AQIIGLTCRVGRAISGSAEMIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+IVDTS+EIGG+GD+PH GIG ARRMQVP MQH V+IEAVENHMP+VIVIDEIGT+LE
Sbjct: 121 IIVDTSNEIGGDGDVPHSGIGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
AMAA+TIAQRG+QLV TAHGVTIE++I NP L+ML+GG+++VTLGDEEA +R VQKT+LE
Sbjct: 181 AMAATTIAQRGVQLVGTAHGVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
RKGP TF CAVE++SKTE RVHH L+ATVDAIL+G+ P E R+M H+ S E
Sbjct: 241 RKGPPTFLCAVEMISKTECRVHHRLDATVDAILAGKPPKFEARKM-HNKSTEFEMPLVIP 299
Query: 405 ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPN--------IGEDCWEDGL------- 449
+ + E + ++ M VT + F +F + ED + D
Sbjct: 300 DREYEIESLPLYQEVM-VTRSLSSDGNFSDDFAASRQTKSKSMPSEDNFGDNFVYTRKAK 358
Query: 450 ---------LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSG 500
L+++Y Y I EA ++Q+ + DD + +TD+I AD +LA S++K+N
Sbjct: 359 GNKPVHGKSLVQVYTYQISEADILQVATMMGFDDELDVTDDIGAADVILASSSEMKQNPW 418
Query: 501 IQAAAKSHDIPIYATKTSSLVQITKALRALID-DHTG------------EFKDLRSEDKI 547
I AK H +PI+ KT+++ QI KA+R ++ D+T E +D + K
Sbjct: 419 IHNVAKYHKLPIFVVKTNTMAQIVKAIRMIVGRDNTSSSKQPEVMEGEIEIEDDAPKRKP 478
Query: 548 NLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDA 607
+L E+IDALEEAR+AIE +VIP GE VELLPR S I++ Q++L+ YQL + G + ++
Sbjct: 479 SL-EEIDALEEARLAIEYIVIPGGEPVELLPRCSEIVARQLELVESYQLLAETFGSDSNS 537
Query: 608 RLRILPFQ-TRRDEPRNSGETFDEDIEFDEFPGS----SSNSNGTRYTVDRLPFLP 658
RL+ILP + T+R +++G + + + GS S N G+ ++ RLPFLP
Sbjct: 538 RLQILPMKITKRGSSKDNGAS-----KPTKQTGSDLIVSENGGGSSFS--RLPFLP 586
>gi|449465306|ref|XP_004150369.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
gi|449513026|ref|XP_004164207.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 733
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/640 (46%), Positives = 417/640 (65%), Gaps = 71/640 (11%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL + LLP MR + H E ELIEVV+DLGR P+ARFPSGD+ +S+ + + H
Sbjct: 110 ELEMFIELLPSRMRKELRSHTEFRELIEVVLDLGRNPIARFPSGDWPISEEPVKHEDLSH 169
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A ++VGDF+ DNR+G+ R+LHRISAIRNRK IIGLTCRVGR++SGSA +++DLV+ G S
Sbjct: 170 AIAKVGDFSDDNRSGMDRSLHRISAIRNRKMQIIGLTCRVGRSISGSAEIIRDLVEGGGS 229
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA+D+KKRV+IVDTS+EIGG+GD+PH GIG+ARRMQVPN
Sbjct: 230 ILVIGPPGVGKTTLIREIARMLADDHKKRVVIVDTSNEIGGDGDVPHAGIGSARRMQVPN 289
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLV TAHG+TI+N+I NP
Sbjct: 290 VNMQHTVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGITIDNIIKNP 349
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
SL++L+GG+++VTLGDEEA +R VQKT+LERKGPSTF+CAVE++SKTE RVHH L+ TVD
Sbjct: 350 SLQILVGGIESVTLGDEEARKRKVQKTILERKGPSTFTCAVEMISKTECRVHHRLDTTVD 409
Query: 375 AI--------------------------------LSGRIPNVEIRRMQHDGSKETVEK-E 401
AI L R+P+ + + H S V + E
Sbjct: 410 AILAGKPPLFEVRHVDTYANHSMGSSPNHVKSLGLHERLPSKDSNIIAHSDSNLKVRQME 469
Query: 402 FFAETS--SDEEDEMMVE-----DAMEVTEERTGKIQFISEFPPNIGEDCWEDGLL-IRL 453
+A S S + E +++ + V + I+ + F +++
Sbjct: 470 TYANHSVESSPKHETILQGRVNLKDLNVIADNDSDIEDVGHFSHQPKSRSVSKKSSPVQV 529
Query: 454 YVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIY 513
Y Y ILE+ ++Q+ + L++++ + +TD+I ADA+LA ++K+N I++ AK H +P++
Sbjct: 530 YSYKILESDLLQVAQVLELENEIDVTDDIETADAILATSYEMKQNPWIRSVAKFHHLPVF 589
Query: 514 ATKTSSLVQITKALRALID-DHTGEFKDLRSEDKINLS----------EKIDALEEARVA 562
K++++ Q+ KA+R +I D + K R I + E+IDALEE R+A
Sbjct: 590 VIKSNTMAQMVKAIRMIIKIDSSSTSKKPRKTPDIVIEDDAPKRKPSLEEIDALEEVRLA 649
Query: 563 IEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQTRR---D 619
IE +VIP GE VELLPR S I++ Q++L+ YQL + +P+ RL+ILP + +
Sbjct: 650 IEYIVIPGGEPVELLPRCSEIVARQLELVESYQLAAEYSSSDPNPRLQILPVRLKNKTLK 709
Query: 620 EPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
EP++ ++ DE G + RLP LP+
Sbjct: 710 EPKSILKSI-----IDEGTG-----------ISRLPLLPE 733
>gi|15810179|gb|AAL06991.1| AT3g10420/F13M14_30 [Arabidopsis thaliana]
gi|28416489|gb|AAO42775.1| At3g10420/F13M14_30 [Arabidopsis thaliana]
Length = 559
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 296/593 (49%), Positives = 403/593 (67%), Gaps = 72/593 (12%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MDLGRKPLARFPSGD+ +S+ +T +E A S+VGDF+ DNR+GI R+LHRISAIRNRK
Sbjct: 1 MDLGRKPLARFPSGDWVISEQPVTHQDLELAVSKVGDFSDDNRSGIDRSLHRISAIRNRK 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
+IGLTCRVGR VSGSA +++DL++ G S+L IG PGVGKTT+IREIAR+LA++++KRV
Sbjct: 61 LQVIGLTCRVGRVVSGSAEIIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+IVDTS+EIGG+GD+PH GIG ARRMQVPN +QH V+IEAVENHMP+ I+IDEIGT+LE
Sbjct: 121 VIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A+AASTIAQRG+QLVATAHG+TI+N+I NPSL++LIGG+++VTLGDEEA +R VQKT+LE
Sbjct: 181 ALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
RKGP TF+CAVE++S+TE RVH L+ TVDAIL+G+ EIR+++ +
Sbjct: 241 RKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQIRGE------------ 288
Query: 405 ETSSDEEDEMMVEDAMEVTEERTGKI---QFISEFPPNIGEDCWEDGLLIR--------- 452
D +++ +E EE + F+SE + +D ED LLIR
Sbjct: 289 ---DDVPHKLVTPIPLENLEEEPAPLLNRDFVSEL---LSDDEDEDFLLIRSNKARSNTY 342
Query: 453 ---------LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQA 503
+Y Y +LEA ++Q+ + + +DD +++TD++ EAD +LA S+LK+NS I+
Sbjct: 343 TSPRSSPVHVYTYNVLEADLLQVAEVMGLDDEIEVTDDVGEADVILASSSELKQNSSIRR 402
Query: 504 AAKSHDIPIYATKTSSLVQITKALRAL-----------------IDDHTGEFKDLRSEDK 546
AK H +PI+ K++++ Q+ KA+R + +DD E KD E K
Sbjct: 403 VAKLHKLPIFVIKSTTMAQMVKAVRMILGRESFGSAPKAIEKSSVDDI--EIKDDAPESK 460
Query: 547 INLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPD 606
+L E++DALEE R+AIE +VIP GE VELLPR S I+ Q++L+ YQL + +G +
Sbjct: 461 PSL-EELDALEEVRLAIEYIVIPGGEPVELLPRRSDIIVRQLELVESYQLAVENLGTHLN 519
Query: 607 ARLRILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
RL+ILP ++ + +S S+ S GT T RLPFL D
Sbjct: 520 PRLQILPRRSTKKTLTSSSPQ-----------KSADGSMGTTGT--RLPFLKD 559
>gi|296085962|emb|CBI31403.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/569 (49%), Positives = 397/569 (69%), Gaps = 21/569 (3%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MDLGRKPLARFPSGD+ +S+ + + ++HA S+VG+F+ DNR+GI+ +LHRISAIRNRK
Sbjct: 1 MDLGRKPLARFPSGDWLISEQIVKLEDLQHAISKVGEFSDDNRSGINHSLHRISAIRNRK 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
IIGLTCRVGR+VSGSA +++DLV+ G S+L IGPPGVGKTT+IREIAR+LA+++ KRV
Sbjct: 61 MQIIGLTCRVGRSVSGSAEIVRDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHMKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+IVDTS+EIGG+GD+PH GIG ARRMQV N MQH V+IEAVENHMP+ I+IDEIGT+LE
Sbjct: 121 VIVDTSNEIGGDGDVPHSGIGRARRMQVSNVNMQHNVMIEAVENHMPETIIIDEIGTELE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A+AASTIAQRG+QLV TAHG+TI+N++ NPSL++L+GG+++VTLGDEEA +R VQKT+LE
Sbjct: 181 ALAASTIAQRGVQLVGTAHGMTIDNIMKNPSLQILVGGIESVTLGDEEARKRKVQKTILE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
RKGP TF+CAVE++S+T RVHH L+ATVDAIL+G+ P E+R M D +K A
Sbjct: 241 RKGPPTFTCAVEMISRTHCRVHHRLDATVDAILAGKSPLFELRHM--DAEANISQKPTLA 298
Query: 405 ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVV 464
E+ + + + ++E+ P + + + + +Y Y ILEA ++
Sbjct: 299 SEKKLLEESRITKSEVVESDEKHVHHSPSRSNPWSTDKPVSKQSSAVCVYTYKILEADLL 358
Query: 465 QLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQIT 524
Q+ K + ++D + +TD+I ADA+LA S+LK+ I+ AK H +P++ K++++ Q+
Sbjct: 359 QVAKVMGLEDEIDVTDDIGTADAILASSSELKQYPWIRGVAKFHQLPVFVIKSNTMAQMV 418
Query: 525 KALRALIDDH---TGEFKDLRSEDKINLS----------EKIDALEEARVAIEQVVIPKG 571
KA+R ++ + K L+S I + E+IDALEE R+AIE +VIP G
Sbjct: 419 KAVRMILGIESFGSKPKKPLKSSFDIEIEDDAPKRKPSLEEIDALEEVRLAIEYIVIPGG 478
Query: 572 ESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQT-RRDEPRNSGETFDE 630
E VELLPR S I++ Q++L+ YQL + G E + RL+ILP ++ ++ ++S + +
Sbjct: 479 EPVELLPRRSDIIARQLELVESYQLAVENSGTELNPRLQILPLRSNKKTTNKSSKSSLQK 538
Query: 631 DIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ + G +V RLP LP+
Sbjct: 539 ETNVKPL-----TTGGGGTSVARLPLLPE 562
>gi|168013314|ref|XP_001759346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689659|gb|EDQ76030.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 284/566 (50%), Positives = 385/566 (68%), Gaps = 61/566 (10%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
+DLGR+PLARFPSGD+ +S+ ++T ++HA S G+F DNRAGI RTLHR+SA+R R
Sbjct: 1 LDLGRRPLARFPSGDWYVSESKVTAQDLQHAISMTGEFGDDNRAGIDRTLHRVSAMRTRS 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
G+++GLTCRVGRA+SGSA +++DL+ +SLL +GPPGVGKTT IREIAR+LA++Y KRV
Sbjct: 61 GSVVGLTCRVGRAISGSAEMVRDLIASSSSLLLMGPPGVGKTTAIREIARMLADEYHKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+IVDTS+EI G+GDIPH GIG ARRMQVP ++QHKV+IEAVENHMPQVIVIDEIGT+LE
Sbjct: 121 VIVDTSNEIAGDGDIPHAGIGMARRMQVPKVDLQHKVMIEAVENHMPQVIVIDEIGTELE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A+AA TIAQRG+QLV TAHG+T+ENLI NPSL+ L GG+Q+VTLGDEEA RR VQK+VLE
Sbjct: 181 AVAAGTIAQRGVQLVGTAHGMTVENLIKNPSLQNLAGGIQSVTLGDEEARRRRVQKSVLE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
R+GP F+ A E++S+TE RVH SL ATVDA+L+G+ P VE+R+M +G V A
Sbjct: 241 RQGPPVFTSACEMISRTEWRVHRSLAATVDALLAGKSPRVEVRKMNENGQ---VVVGNLA 297
Query: 405 E----------------------TSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGE 442
E T + EED+ D TG N
Sbjct: 298 EYPSPSRPGSSTSGSSSSYDLDWTDNYEEDDYAGGD--------TGA--------ENAAV 341
Query: 443 DCWE-DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGI 501
WE I LY++ + E ++ Q++ + +++ VQ+T++I ADA+LAL SKLK NS +
Sbjct: 342 QAWERSDAPILLYLHEVTEESLEQVMDVMGLENTVQITEDIGAADAVLALRSKLKLNSWV 401
Query: 502 QAAAKSHDIPIYATKTSSLVQITKALRALI------DDHTGEFKDLRSED---------- 545
+ AK +PI+ K +++ Q+ +A+RA++ ++ G + LR +D
Sbjct: 402 RGMAKFRQLPIFVIKANTMAQMVRAMRAIMSMESLGNNSLGSNR-LRGDDGEKSESIIHR 460
Query: 546 KINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEP 605
+ N +E+IDALEEARVA+EQ+VIPK ++VELLPR +L++Q+ L+ YQL +++ G
Sbjct: 461 QPNSAEEIDALEEARVAVEQIVIPKVQAVELLPRSPEVLALQVKLVESYQLAWEKTGSGM 520
Query: 606 DARLRILPFQ--TRRDEPRNSGETFD 629
+ RLRILP Q R R S + D
Sbjct: 521 NKRLRILPKQLVARSRNSRGSDQEAD 546
>gi|425449052|ref|ZP_18828896.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765138|emb|CCI08948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 603
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/581 (47%), Positives = 373/581 (64%), Gaps = 47/581 (8%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 34 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 89
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 90 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 149
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 150 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 209
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 210 RRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 269
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 270 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHE 329
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ T+D +L GR +IR + +G + ++E E + + E
Sbjct: 330 DVSTTIDQLLRGREAIAQIRWVDEEGKIQVAQEEPKPENLTPLRGNYLPEMDKPKGWRAD 389
Query: 428 GKIQFISEFP--------------------------------PNIGEDCWEDGLLIRLYV 455
G++ ++ FP PN GED W + +Y
Sbjct: 390 GRMTPVARFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYP 443
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YG+ A + Q+++ L D + LT ++ EADA+LAL S +K S ++ AK IPI+
Sbjct: 444 YGVSRAPIEQVVQAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPIHGI 501
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K+++L QI++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+
Sbjct: 502 KSNTLPQISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQ 561
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 562 PVELLPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|425438133|ref|ZP_18818542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676734|emb|CCH94266.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 603
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/574 (47%), Positives = 371/574 (64%), Gaps = 43/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E E + + E G++ ++
Sbjct: 337 QLLRGREAIAQIRWVDEEGKIQVAQEEPKPENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 435 EFP--------------------------------PNIGEDCWEDGLLIRLYVYGILEAT 462
FP PN GED W + +Y YG+ A
Sbjct: 397 RFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYPYGVSRAP 450
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ L D + LT ++ EADA+LAL S +K S ++ AK IPI+ K+++L Q
Sbjct: 451 IEQVVQAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQ 508
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR
Sbjct: 509 ISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELLPR 568
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 569 SAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|425459771|ref|ZP_18839257.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827687|emb|CCI20874.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 603
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/581 (47%), Positives = 373/581 (64%), Gaps = 47/581 (8%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 34 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 89
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 90 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 149
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 150 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 209
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 210 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 269
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 270 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHE 329
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ T+D +L GR +IR + +G + ++E E + + E
Sbjct: 330 DVSTTIDQLLRGREAIAQIRWVDEEGKVQVAQEEPKPENLTPLRGNYLPEMDKPKGWRAD 389
Query: 428 GKIQFISEFP--------------------------------PNIGEDCWEDGLLIRLYV 455
G++ ++ FP PN GED W + +Y
Sbjct: 390 GRMTPVARFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYP 443
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YG+ A + Q+++ L D + LT ++ EADA+LAL S +K S ++ AK IPI+
Sbjct: 444 YGVSRAPIEQVVQAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPIHGI 501
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K+++L QI++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+
Sbjct: 502 KSNTLPQISRGLKRILGIDDPMNQEGADLRLFARSGNDDEIEALEEARLAVEQIVIPTGQ 561
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 562 PVELLPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|440754058|ref|ZP_20933260.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
gi|440174264|gb|ELP53633.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
Length = 572
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/569 (47%), Positives = 370/569 (65%), Gaps = 33/569 (5%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 6 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 66 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 246 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E E + + E G++ ++
Sbjct: 306 QLLRGREAIAQIRWVDEEGKVQVAQEEPKPENLTPLRGNYLPEMDKPKGWRADGRMTPVA 365
Query: 435 EFPPN----------IGEDCW-----------------EDGLLIRLYVYGILEATVVQLI 467
FP + E W ED + +Y YG+ A + Q++
Sbjct: 366 RFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPNGED-WPVYVYPYGVSRAPIEQVV 424
Query: 468 KQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKAL 527
+ L D + LT ++ EADA+LAL S +K S ++ AK IPI+ K+++L QI++ L
Sbjct: 425 QAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQISRGL 482
Query: 528 RALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYIL 584
+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR + +
Sbjct: 483 KRILGIDDPMNQEGADLRLFARSGNDDEIEALEEARLAVEQIVIPTGQPVELLPRSAKVR 542
Query: 585 SIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+Q +L+ Y+L G+EP+ R+RI P
Sbjct: 543 KMQHELVEHYRLQSDSFGEEPNRRIRIYP 571
>gi|425464557|ref|ZP_18843867.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833423|emb|CCI22104.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 581
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/576 (47%), Positives = 374/576 (64%), Gaps = 37/576 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 12 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 68 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 128 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 248 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ T+D +L GR +IR + +G + ++E +E + + E
Sbjct: 308 DVSTTIDQLLRGREAIAQIRWVDEEGKVQVAQEEPKSENLTPLRGNYLPEMDKPKGWRAD 367
Query: 428 GKIQFISEF---PPN-------IGEDCW-----------------EDGLLIRLYVYGILE 460
G++ +S F P N + E W ED + +Y YG+
Sbjct: 368 GRMTPVSRFGAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPNGED-WPVYVYPYGVSR 426
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
A + Q+++ L D + LT ++ EADA+LAL S +K S ++ AK IPI+ K+++L
Sbjct: 427 APIEQVVQAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTL 484
Query: 521 VQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
QI++ L+ ++ D E D+R + ++I+ALEEAR+A+EQ+VIP G+ VELL
Sbjct: 485 PQISRGLKRILGIDDPMNQEGADMRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELL 544
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 545 PRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 580
>gi|425455395|ref|ZP_18835115.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803727|emb|CCI17377.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 603
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/574 (47%), Positives = 371/574 (64%), Gaps = 43/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPVRIRSKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E +E + + E G++ ++
Sbjct: 337 QLLRGREAIAQIRWVDEEGKVQVAQEEPKSENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 435 EFP--------------------------------PNIGEDCWEDGLLIRLYVYGILEAT 462
FP PN GED W + +Y YG+ A
Sbjct: 397 RFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYPYGVSRAP 450
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L Q
Sbjct: 451 IEQVVQSL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQ 508
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR
Sbjct: 509 ISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELLPR 568
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 569 SAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|425472177|ref|ZP_18851028.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881819|emb|CCI37683.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 581
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/581 (47%), Positives = 372/581 (64%), Gaps = 47/581 (8%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 12 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 68 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 128 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 248 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ T+D +L GR +IR + +G + ++E E + + E
Sbjct: 308 DVSTTIDQLLRGREAIAQIRWVDEEGKVQVAQEEPKPEKLTPLRGNYLPEMDKPKGWRAD 367
Query: 428 GKIQFISEFP--------------------------------PNIGEDCWEDGLLIRLYV 455
G++ ++ FP PN GED W + +Y
Sbjct: 368 GRMTPVARFPEGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYP 421
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YG+ A + Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+
Sbjct: 422 YGVSRAPIEQVVQAL--DLPIVLTKDLQAADAVLALRSHVKNQSKLRQIAKVRQIPIHGI 479
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K+++L QI++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+
Sbjct: 480 KSNTLPQISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQ 539
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 540 PVELLPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 580
>gi|425443006|ref|ZP_18823238.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389715784|emb|CCH99888.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 603
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/574 (47%), Positives = 371/574 (64%), Gaps = 43/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E +E + + E G++ ++
Sbjct: 337 QLLRGREAIAQIRWVDEEGKVQVAQEEPKSENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 435 EFP--------------------------------PNIGEDCWEDGLLIRLYVYGILEAT 462
FP PN GED W + +Y YG+ A
Sbjct: 397 RFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYPYGVSRAP 450
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L Q
Sbjct: 451 IEQVVQAL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQ 508
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR
Sbjct: 509 ISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELLPR 568
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 569 SAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|425447044|ref|ZP_18827039.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732499|emb|CCI03582.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 603
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/574 (47%), Positives = 371/574 (64%), Gaps = 43/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPVRIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E +E + + E G++ ++
Sbjct: 337 QLLRGREAIAQIRWVDEEGKVQVAQEEPKSENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 435 EFP--------------------------------PNIGEDCWEDGLLIRLYVYGILEAT 462
FP PN GED W + +Y YG+ A
Sbjct: 397 RFPAGPLNRENDFDRLLEQSWLQEEPETEKVRVPGPN-GED-WP----VYVYPYGVSRAP 450
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L Q
Sbjct: 451 IEQVVQAL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQ 508
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR
Sbjct: 509 ISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELLPR 568
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 569 SAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|428314326|ref|YP_007125303.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
gi|428255938|gb|AFZ21897.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
Length = 611
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/579 (48%), Positives = 375/579 (64%), Gaps = 52/579 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LPEE+R + +HP+ LIEVVMDLGR P RFP G L + IT I H
Sbjct: 44 DLQKLLDILPEEIRSVLEQHPQQDRLIEVVMDLGRFPEVRFPQGAEYLLETPITQEQINH 103
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI RTLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 104 CVQRVGHFSGDNRAGIERTLHRISAIRNRPGEIIGLTCRVGRAVFGTIGMIRDLVETGQS 163
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 164 ILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 223
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 224 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLIKNP 283
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + VH S+ TVD
Sbjct: 284 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVVHESVSDTVD 343
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEF-------------------------------- 402
+L GR PN ++ R H+ K T+ +EF
Sbjct: 344 DLLRGRQPNPQV-RTAHENGKVTITREFPTAPVATPPNRAGLSSVQAKSTGWRSSGQMKP 402
Query: 403 ----FAETSSDEED-EMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYG 457
AE S+ + E ++ + + ++ ++ PN GED L + +Y YG
Sbjct: 403 LSRPLAEPYSENRNFEQLLNQSWQEQDDFANGVRMPG---PN-GED-----LPLHIYPYG 453
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + Q+I+ L + V LT ++ ADA+L+L S +K + +++ AK+ +PI++ K+
Sbjct: 454 VSRHQLEQVIQVLNL--PVVLTKDMDSADAVLSLRSHVKNHGKLRSIAKARHVPIHSVKS 511
Query: 518 SSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
S++ QIT+ALR ++ D E DLR + ++I+ALEEAR+A+EQ+V+PKG+ V
Sbjct: 512 STIPQITRALRHMLDMDDPSMPEVTDLRLFTQSGTEDEIEALEEARLAVEQIVLPKGQPV 571
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 572 ELLPRSPKVRKMQHELVEHYRLKSDSFGDEPNRRLRIYP 610
>gi|390442301|ref|ZP_10230310.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389834387|emb|CCI34436.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 581
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/576 (47%), Positives = 371/576 (64%), Gaps = 37/576 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 12 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 68 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 128 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 248 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ T+D +L GR +IR + +G + ++E E + + E
Sbjct: 308 DVSTTIDQLLRGREAIAQIRWVDEEGKVQVAQEEPKPEKLTPLRGNYLPEMDKPKGWRAD 367
Query: 428 GKIQFISEFPPN----------IGEDCW-----------------EDGLLIRLYVYGILE 460
G++ ++ FP + E W ED + +Y YG+
Sbjct: 368 GRMTPVARFPAGPLNRENDFDRLLEQSWLQEELETEKVRIPGPNGED-WPVYVYPYGVSR 426
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
A + Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L
Sbjct: 427 APIEQVVQAL--DLPIMLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTL 484
Query: 521 VQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
QI++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELL
Sbjct: 485 PQISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVELL 544
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 545 PRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 580
>gi|159026253|emb|CAO86402.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 603
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/574 (47%), Positives = 370/574 (64%), Gaps = 43/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E E + + E G++ ++
Sbjct: 337 QLLRGREAIAQIRWVDEEGKIQVAQEEPKPENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 435 EFP--------------------------------PNIGEDCWEDGLLIRLYVYGILEAT 462
FP PN GED W + +Y YG+ A
Sbjct: 397 RFPAGPLNRENDFDRLLEQSWLQEELETEKVRVPGPN-GED-WP----VYVYPYGVSRAP 450
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L Q
Sbjct: 451 IEQVVQAL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQ 508
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR
Sbjct: 509 ISRGLKRILGIDDPMNQEGADLRLFARSGNDDEIEALEEARLAVEQIVIPTGQPVELLPR 568
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 569 SAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|254409994|ref|ZP_05023774.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196183030|gb|EDX78014.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 598
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/568 (48%), Positives = 374/568 (65%), Gaps = 32/568 (5%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LPE++R + +HP LIEVVMDLGR P RFPSG LS+ +T + +
Sbjct: 33 DLQKLLAILPEDIRQILEQHPHRDNLIEVVMDLGRFPEVRFPSGAEYLSETPVTAEQLNY 92
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAG+ +TLHRISAIRNR G IIGLTCRVGRAV G+ L+ DLV+ G S
Sbjct: 93 CVERVGHFSGDNRAGLEKTLHRISAIRNRPGDIIGLTCRVGRAVFGTIGLIHDLVERGQS 152
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 153 ILMLGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 212
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENH P+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 213 PELQHQVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 272
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 273 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 332
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
A+L GR PN ++R + D +K + +EF + E A +G++Q +S
Sbjct: 333 ALLRGRKPNPQMRTVD-DQNKVIITREFPDAPAPLERRTQSGLVAKPSGWRSSGQMQPLS 391
Query: 435 E----------FPPNIGEDCWE----------------DGLLIRLYVYGILEATVVQLIK 468
+ + D W+ + L + +Y YG+ + Q+I+
Sbjct: 392 RSSSPASAQTSYFDQLLHDSWQQPNSVGEVIDTIGPNGEDLPLHVYPYGVSRHQIEQVIR 451
Query: 469 QLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALR 528
L + V LT ++ ADA+L L S +K +S +++ A+S IPI+A K S++ Q+++ALR
Sbjct: 452 VLNL--PVVLTKDMDSADAILGLRSHVKSHSKLRSIARSRQIPIHAVKASTVPQVSRALR 509
Query: 529 ALID-DHTG--EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILS 585
++D D G + DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR +
Sbjct: 510 RMLDMDDPGVPDAADLRLFTQSGSDDEIEALEEARLAVEQIVIPNGQPVELLPRSPKVRK 569
Query: 586 IQIDLIRKYQLHYQRVGKEPDARLRILP 613
+Q +L+ Y+L G EP+ RLRI P
Sbjct: 570 MQHELVEHYRLKSDSFGDEPNRRLRIYP 597
>gi|166367800|ref|YP_001660073.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
gi|166090173|dbj|BAG04881.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
Length = 603
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/584 (47%), Positives = 377/584 (64%), Gaps = 53/584 (9%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I
Sbjct: 34 VTDD----LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPI 89
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I+++ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ D
Sbjct: 90 SKEEIQYSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLIND 149
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 150 LVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRA 209
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 210 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQL 269
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H
Sbjct: 270 ENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHE 329
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKE-------------------------- 401
+ T+D +L GR +IR + +G + ++E
Sbjct: 330 DVSTTIDQLLRGREAIAQIRWVDEEGKVQVTQEEPKPEKLTPLRGNYLPEMDKPKGWRAD 389
Query: 402 --------FFAETSSDEED-EMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIR 452
F A + E D + ++E + E T K++ PN GED W +
Sbjct: 390 GRMTPVARFGAGGLNRENDFDRLLEQSWLQEEPETEKVRVPG---PN-GED-WP----VY 440
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
+Y YG+ A + Q+++ L D + LT ++ EADA+LAL S +K S ++ AK IPI
Sbjct: 441 VYPYGVSRAPIEQVVQAL--DLPIVLTKDLQEADAVLALRSHVKNQSKLRQIAKVRQIPI 498
Query: 513 YATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIP 569
+ K+++L QI++ L+ ++ D E D+R + ++I+ALEEAR+A+EQ+VIP
Sbjct: 499 HGIKSNTLPQISRGLKRILGIDDPMNQEGADMRLFARSGSDDEIEALEEARLAVEQIVIP 558
Query: 570 KGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
G+ VELLPR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 559 TGQPVELLPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|443669237|ref|ZP_21134472.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
gi|443330479|gb|ELS45192.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
Length = 572
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/569 (47%), Positives = 369/569 (64%), Gaps = 33/569 (5%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 6 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISKEEIQY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 66 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 246 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR +IR + +G + ++E E + + E G++ ++
Sbjct: 306 QLLRGREAIAQIRWVDEEGKIQVAQEEPKPENLTPLRGNYLPEMDKPKGWRADGRMTPVA 365
Query: 435 EFPPN----------IGEDCW-----------------EDGLLIRLYVYGILEATVVQLI 467
FP + E W ED + +Y YG+ A + Q++
Sbjct: 366 RFPAGPLNRENDFDRLLEQSWLQEELETEKVRVPGPNGED-WPVYVYPYGVSRAPIEQVV 424
Query: 468 KQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKAL 527
+ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++L QI++ L
Sbjct: 425 QAL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNTLPQISRGL 482
Query: 528 RALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYIL 584
+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELLPR + +
Sbjct: 483 KRILGIDDPMNQEGADLRLFARSGNDDEIEALEEARLAVEQIVIPTGQPVELLPRSAKVR 542
Query: 585 SIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+Q +L+ Y+L G+EP+ R+RI P
Sbjct: 543 KMQHELVEHYRLQSDSFGEEPNRRIRIYP 571
>gi|422305000|ref|ZP_16392337.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789775|emb|CCI14286.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 603
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/577 (47%), Positives = 374/577 (64%), Gaps = 49/577 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP +R ++ EHP ++LIEVVMDLGR P ARFP G L D I+ I++
Sbjct: 37 DLNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPDGAIDLGDEPISQEEIQY 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ L+ DLV+ G S
Sbjct: 97 SIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + +H + T+D
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTID 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--------------------------------- 401
+L GR +IR + +G + ++E
Sbjct: 337 QLLRGREAIAQIRWVDEEGKVQVAQEEPKPENLTPLRGNYLPEMDKPKGWRADGRMTPVA 396
Query: 402 -FFAETSSDEED-EMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGIL 459
F A + E D + ++E + E T KI+ PN GED W + +Y YG+
Sbjct: 397 RFGAGPLNRENDFDRLLEQSWLQEEPETEKIRVPG---PN-GED-WP----VYVYPYGVS 447
Query: 460 EATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSS 519
A + Q+++ L D + LT ++ ADA+LAL S +K S ++ AK IPI+ K+++
Sbjct: 448 RAPIEQVVQAL--DLPIVLTKDLQGADAVLALRSHVKNQSKLRQIAKVRQIPIHGIKSNT 505
Query: 520 LVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVEL 576
L QI++ L+ ++ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VEL
Sbjct: 506 LPQISRGLKRILGIDDPMNQEGADLRLFARSGSDDEIEALEEARLAVEQIVIPTGQPVEL 565
Query: 577 LPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LPR + + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 566 LPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRIRIYP 602
>gi|119484836|ref|ZP_01619318.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
gi|119457654|gb|EAW38778.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
Length = 582
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/584 (46%), Positives = 378/584 (64%), Gaps = 53/584 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++PEE+R V HP+ LIE+V+DLGR P ARFP G +S ++ ++H
Sbjct: 6 DLNRLLNIVPEEIRRNVELHPQRNSLIEIVLDLGRCPEARFPLGAEYISQTAVSWEDLDH 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
SQ+G+F+ DNRAGI RTLHRISAIRNR G +IGLTCRVGRAV G +++DLV+ G S
Sbjct: 66 CISQIGEFSGDNRAGIERTLHRISAIRNRTGKVIGLTCRVGRAVFGKVGMIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELSKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG IENL+ NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEAIAARTIAERGVQLIGTAHGNRIENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + VH S+ +T+D
Sbjct: 246 TLADLIGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERDRWVVHESVASTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEM--MVEDAMEVT--------- 423
++L G P +++R M G VE+ + + +++ + V ++EV+
Sbjct: 306 SLLRGMQPTLQVRTMDEAGEVSMVEERYNSPSAAPPTRTLSPQVMKSVEVSAPGLTGLRG 365
Query: 424 ---------EERTGKIQFI-------------------SEFP---PNIGEDCWEDGLLIR 452
E+ T + ++ +E P PN GED L +
Sbjct: 366 SGKMIPIPPEKSTPENKYFEQLLDASFTTGLRGIVGGNAEHPAVGPN-GED-----LPLH 419
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
+Y YGI + Q+I+ L++ V LT +I AD +LAL S ++ S ++ AK+ +PI
Sbjct: 420 IYPYGIARHQLDQVIRSLRL--PVALTKDIDSADVVLALRSHIRNQSKLRHMAKTRQVPI 477
Query: 513 YATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIP 569
+ K+ S Q+ +ALR L+ D + E DL + ++I+ALEEAR+A+EQ+VIP
Sbjct: 478 HTVKSGSAPQVARALRRLLNMEDPNAPEVPDLALFARSGSEDEIEALEEARLAVEQIVIP 537
Query: 570 KGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
KG+ VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 538 KGQPVELLPRSPQVRKMQHELVEHYRLKSNSFGEEPNRRLRIYP 581
>gi|428203424|ref|YP_007082013.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
gi|427980856|gb|AFY78456.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
Length = 583
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/579 (46%), Positives = 378/579 (65%), Gaps = 51/579 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LPE++R +V +HP+L L+EVVMDLGR P ARFP+ L D ++ +++
Sbjct: 15 DLNKLLEILPEKIRAKVEQHPKLESLVEVVMDLGRLPEARFPNEAVYLGDVPVSKEDLQY 74
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F+ DNRAGI RTLHRISAIRNR G I+GLTCRVGRA+ G+ ++DLV+ G S
Sbjct: 75 SIDRVGTFSGDNRAGIERTLHRISAIRNRTGEIVGLTCRVGRAILGTIEAIRDLVETGKS 134
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 135 ILLLGRPGVGKTTALREIARVLADEFHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 194
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP++IVIDEIGT+LEAMAA TIA+RG+QLV TAHG IENLI NP
Sbjct: 195 PELQHQVMIEAVENHMPEIIVIDEIGTELEAMAARTIAERGVQLVGTAHGNRIENLIKNP 254
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + VH + TVD
Sbjct: 255 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVVHEDVANTVD 314
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAET---------------------------- 406
+L GR P +++R + +G E+ +T
Sbjct: 315 DLLRGREPTLQVRTIDENGRVTITEEHPQLQTVGGLVSSTPTVVAPPRPSGWRASGRMTP 374
Query: 407 ---------SSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYG 457
S+ + E M++ + E+ + KI+ PN GED W + +Y YG
Sbjct: 375 VSPLEGERYSAKTDFEQMLDRSWYQPEKSSEKIRTPG---PN-GED-WP----VYVYPYG 425
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + + Q+++ L + + +T ++ AD +LAL S +K +S ++ A++ IPI+ K+
Sbjct: 426 VGRSQIEQVVEILNL--PIVITKDMDNADVVLALRSHVKNHSKLRQIARARQIPIHGIKS 483
Query: 518 SSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
+++ QIT+ALR ++ D + E DLR ++I+ALEEAR+A+EQ+VIP G+ V
Sbjct: 484 NTIPQITRALRRILGMDDPNIPETTDLRLFASNGSDDEIEALEEARLAVEQIVIPTGQPV 543
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR I +Q +L+ Y+LH G+EP+ RLRI P
Sbjct: 544 ELLPRSPRIRKMQHELVEHYRLHSDSFGEEPNRRLRIYP 582
>gi|428224232|ref|YP_007108329.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
gi|427984133|gb|AFY65277.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
Length = 605
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/610 (45%), Positives = 388/610 (63%), Gaps = 41/610 (6%)
Query: 37 SPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPE 96
SPN T F E+ S S+ +L +LLA+LP E++ R+ +HP+
Sbjct: 3 SPNGTNFFEQ-----SDLSTPASVSPETMTQAPGQPSSDLPKLLAILPVELQQRLDQHPQ 57
Query: 97 LYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHR 156
+L+EVV+DLGR+P ARFP LSD +++ I+H +++ F+ DNRAGI RTLHR
Sbjct: 58 RDKLVEVVLDLGRRPEARFPGKAEYLSDLPVSLEDIDHCLARISSFSGDNRAGIERTLHR 117
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVL 216
ISAIRNR G +IGLTCRVGRA+ G+ +++DLV+ G S+L +G PGVGKTT +REIARVL
Sbjct: 118 ISAIRNRSGDVIGLTCRVGRAIFGTIGMIRDLVETGQSILLLGRPGVGKTTALREIARVL 177
Query: 217 ANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
A+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV E+QH+V+IEAVENHMP+VIVI
Sbjct: 178 ADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVI 237
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRR 336
DEIGT+LEA+AA TIA+RG+QLV TAHG I NLI NP+L L+GG+Q+VTLGD+EA RR
Sbjct: 238 DEIGTELEALAARTIAERGVQLVGTAHGNQIANLIKNPTLSDLVGGIQSVTLGDDEARRR 297
Query: 337 GVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKE 396
G QKTVLERK P TF AVE++ + VH ++ TVD +L GR PN +IR + +G K
Sbjct: 298 GSQKTVLERKAPPTFEIAVEMLERERWVVHENVADTVDQLLRGRQPNPQIRTVS-EGGKV 356
Query: 397 TVEKEF--------------FAETSSDEEDEMMVEDAMEVTEERTGKIQFISE-FPP--N 439
T+ +E SS + + E T E + Q ++E PP
Sbjct: 357 TITRELSRPEPESPPSRGGRAGWRSSGQMVPPPPQARREATREESYFEQLLNESLPPRSR 416
Query: 440 IGEDCWEDG-------------LLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEAD 486
+ + E+G L + +Y Y + + Q+I+ L + V T ++ AD
Sbjct: 417 LDQSLLEEGDRPERIPGPNGEELPLYIYPYAVSRQHLEQVIQTLNL--PVVPTKDLDGAD 474
Query: 487 ALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRS 543
A+LAL S +K ++ ++ A+S IPI+ K++++ QI + LR ++ D E DLR
Sbjct: 475 AILALRSHIKNHAKLRHLARSRHIPIHIIKSNTVPQIARGLRRMLNMDDPSNPEAVDLRL 534
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
+ +++DALEEAR+A+EQ+V+PKG+ VELLPR + + +Q +L+ Y L G+
Sbjct: 535 FTQKGSDDELDALEEARLAVEQIVLPKGQPVELLPRSAAVRKMQHELVEHYHLKSTSFGE 594
Query: 604 EPDARLRILP 613
EP+ RLRI P
Sbjct: 595 EPNRRLRIYP 604
>gi|443321273|ref|ZP_21050332.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
gi|442789018|gb|ELR98692.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
Length = 571
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/574 (46%), Positives = 373/574 (64%), Gaps = 43/574 (7%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D +LL +LP +R + +HP+ +L+EVVMDLGR P ARF G L D +
Sbjct: 12 ITDDLD----KLLEILPNSIRESIEQHPQKNQLVEVVMDLGRIPEARFSDGTADLGDQPM 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T ++H +VG F+ DNRAGI RTLHRISA+RNR G IIGLTCR+GRA+ G+ ++++
Sbjct: 68 TKADLDHCIQRVGHFSGDNRAGIERTLHRISAMRNRGGEIIGLTCRIGRAIFGTITMIRE 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 128 LVESGQSILLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGD+EA RR QKTVLERK P TF+ A+E++ K +H
Sbjct: 248 ENLIKNPTLSDLVGGIQAVTLGDDEARRRNSQKTVLERKAPPTFAIAIEMLEKQRWVIHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA----------------------- 404
+ T+DA+L G +IR + G+ E E+ +
Sbjct: 308 DVAQTIDALLRGYATPQQIRTVNGQGNVEITEEPGYTTNQVNLRESPLKPTGWRASGRMT 367
Query: 405 --ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEAT 462
+ ++ + ++E + + E +T KI+ P GED W + LY YGI +
Sbjct: 368 PIPSEESQQFDTLLEQSWQQKEAQTNKIR----VPGPSGED-WP----VYLYPYGIARSQ 418
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+I L + V LT + ADA+LAL S++K N+ ++ AK++ IPIY K++S+ Q
Sbjct: 419 LEQIINILNL--PVVLTKDFENADAVLALRSQVKTNNKLRQMAKNYQIPIYGIKSNSIPQ 476
Query: 523 ITKALRALID---DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I+ +L+ +++ + E +DLR + ++I+ALEEAR+A+EQ+VIP+ + VELLPR
Sbjct: 477 ISYSLKQMLNLEESQSSEAEDLRLFTQAGNDDEIEALEEARLAVEQIVIPRQQPVELLPR 536
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ +Q +L+ Y L G+EP+ RLRI P
Sbjct: 537 SPKVRKMQHELVEHYHLQSDSFGEEPNRRLRIYP 570
>gi|147841865|emb|CAN66926.1| hypothetical protein VITISV_011830 [Vitis vinifera]
Length = 678
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/547 (48%), Positives = 366/547 (66%), Gaps = 69/547 (12%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L L+P MR + H E+ +LIEVVMDLGRKPLARFPSGD+ +S+ + + ++H
Sbjct: 96 ELDMFLELVPLRMRKELFGHAEIGDLIEVVMDLGRKPLARFPSGDWLISEQIVKLEDLQH 155
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VG+F+ DNR+GI+ +LHRISAIRNRK IIGLTCRVGR+VSGSA +++DLV+ G S
Sbjct: 156 AISKVGEFSDDNRSGINHSLHRISAIRNRKMQIIGLTCRVGRSVSGSAEIVRDLVEGGGS 215
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IREIAR+LA+++ KRV+IVDTS+EIGG+GD+PH GIG A+
Sbjct: 216 ILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRAK------ 269
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLV TAHG+TI+N++ NP
Sbjct: 270 ----EDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIMKNP 325
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
SL++L+GG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+T RVHH L+ATVD
Sbjct: 326 SLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRLDATVD 385
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
AIL+ + R + + V K+ A
Sbjct: 386 AILAEICTSFSPSRSNPWSTDKPVSKQSSA------------------------------ 415
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
+ +Y Y ILEA ++Q+ K + ++D + +TD+I ADA+LA S+
Sbjct: 416 ----------------VCVYTYKILEADLLQVAKVMGLEDEIDVTDDIGTADAILASSSE 459
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDH---TGEFKDLRSEDKINLS- 550
LK+ I+ AK H +P++ K++++ Q+ KA+R ++ + K L+S I +
Sbjct: 460 LKQYPWIRGVAKFHQLPVFVIKSNTMAQMVKAVRMILGIESFGSKPKKPLKSSFDIEIED 519
Query: 551 ---------EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRV 601
E+IDALEE R+AIE +VIP GE VELLPR S I++ Q++L+ YQL +
Sbjct: 520 DAPKRKPSLEEIDALEEVRLAIEYIVIPGGEPVELLPRRSDIIARQLELVESYQLAVENS 579
Query: 602 GKEPDAR 608
G E + R
Sbjct: 580 GTELNPR 586
>gi|16329574|ref|NP_440302.1| hypothetical protein slr0692 [Synechocystis sp. PCC 6803]
gi|383321315|ref|YP_005382168.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324485|ref|YP_005385338.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490369|ref|YP_005408045.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435635|ref|YP_005650359.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|451813733|ref|YP_007450185.1| YCF45 protein [Synechocystis sp. PCC 6803]
gi|1652057|dbj|BAA16982.1| ycf45 [Synechocystis sp. PCC 6803]
gi|339272667|dbj|BAK49154.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|359270634|dbj|BAL28153.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273805|dbj|BAL31323.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276975|dbj|BAL34492.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957455|dbj|BAM50695.1| hypothetical protein BEST7613_1764 [Synechocystis sp. PCC 6803]
gi|451779702|gb|AGF50671.1| YCF45 protein [Synechocystis sp. PCC 6803]
Length = 589
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/585 (47%), Positives = 378/585 (64%), Gaps = 44/585 (7%)
Query: 66 YSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDC 125
Y V+D L +LL++LP+ ++ ++EHP+ +L+EVVMDLGR P ARFP L
Sbjct: 11 YPVDD-----LEQLLSILPKPIQAIIAEHPQRQQLVEVVMDLGRLPEARFPGTAVYLGHE 65
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
I +++A +VG F+ DNRAGI RTLHRISAIRNR IIGLTCRVGRAV G+ NL+
Sbjct: 66 PIAKEDLQYAIDRVGLFSSDNRAGIERTLHRISAIRNRTNEIIGLTCRVGRAVFGTINLI 125
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
QDLV+ G SLL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG
Sbjct: 126 QDLVETGESLLLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIG 185
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
ARRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG
Sbjct: 186 RARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGN 245
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
+ENLI NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TFS AVE++ + + +
Sbjct: 246 RLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFSMAVEMLERQKWTI 305
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSK--ETVEKEFFAETSSDEE--DEMMVED--- 418
H + T+D +L GR P ++R M G ETVE + T +V+D
Sbjct: 306 HSDVALTIDNLLRGRPPVEQLRYMNEQGELQIETVEAQPQERTPQPPPYFSLGLVDDRQL 365
Query: 419 -AMEVTEERTGKIQFISEFPPN---------IGEDCWE-----------------DGLLI 451
TG+++ + N + E W+ + L +
Sbjct: 366 RPRPTGLRSTGRMKPQAPLHANADQVRDFERLLEQSWQQWEGDDEPKIRVPGPNGEDLPV 425
Query: 452 RLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIP 511
+Y YG+ + + Q+I LQ+ AV T ++ +ADA+LAL S +K N ++ AK +P
Sbjct: 426 YVYPYGVGRSQLDQVIDILQLPVAV--TKDVHQADAVLALRSHVKGNQKLRQMAKGIQVP 483
Query: 512 IYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVI 568
IY K++++ QI++AL+ ++ + H E DLR + +++++ALEEAR+A+EQ+VI
Sbjct: 484 IYGVKSNTIPQISRALKRILGMDEPHKAEAADLRLFTRSGSNDELEALEEARLAVEQIVI 543
Query: 569 PKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
P G+ VELLPR ++ +Q +L+ Y+L G EP+ RLRI P
Sbjct: 544 PTGQPVELLPRSPHVRKMQHELVEHYRLQSDSFGDEPNRRLRIYP 588
>gi|427739198|ref|YP_007058742.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
gi|427374239|gb|AFY58195.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
Length = 581
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/579 (46%), Positives = 380/579 (65%), Gaps = 44/579 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP+++R + +HP+ L+EVV+DLGR P ARFPSG LS+ IT I+
Sbjct: 6 DLRKLLAILPQDLRQMLEQHPQRDSLVEVVLDLGRYPEARFPSGAEYLSEVPITQQQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ ++++DLV++G S
Sbjct: 66 CIVRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVHGTISMIRDLVENGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++REIARVLA+D KRV+I+DTS+EI G+GD+PHP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTVLREIARVLADDLDKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ QH+V+IEAVENHMP+VIVIDEIGT+LEA+A+ TIA+RG+QL+ TAHG IENLI NP
Sbjct: 186 PDQQHQVMIEAVENHMPEVIVIDEIGTELEALASRTIAERGVQLIGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE+ + VH S+ T+D
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMQERQRWVVHESVADTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFA----ETSSDEEDEMMVEDAMEVTEER---- 426
+L GR P ++R + +G K + + A + +D +E + R
Sbjct: 306 NLLRGRQPTPQVRTIDDNG-KVAIARHLTAINGGASQTDRGEENRGRSSNRTNGWRASGQ 364
Query: 427 ----------------TGKIQF----------ISEFPPNIGEDCWEDG--LLIRLYVYGI 458
+G+ +F S F N + +G L + +Y YG+
Sbjct: 365 MRPLVPLGAEYQNGNGSGRSEFDRLLDQSFNNSSAFESNGDKHSGPNGEDLPLHIYPYGV 424
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ + Q+++ L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S
Sbjct: 425 SRSQLDQVVEVLHL--PVILTKDIDSADAILALRSHVKNHAKLRQMAKARQVPIHMIKSS 482
Query: 519 SLVQITKALRALIDDHTGEFKDLRSEDKINL----SEKIDALEEARVAIEQVVIPKGESV 574
++ Q+T+ LR L++ E D R E ++ L ++IDALEEAR+A+EQ+VIPKG+ V
Sbjct: 483 TIPQVTRGLRRLLNIDEPEVTDER-ELQLFLHNGSDDEIDALEEARLAVEQIVIPKGQPV 541
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR S + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 542 ELLPRSSQVRKMQHELVEHYRLKSNSFGEEPNRRLRIFP 580
>gi|434396885|ref|YP_007130889.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
gi|428267982|gb|AFZ33923.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
Length = 584
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/578 (47%), Positives = 372/578 (64%), Gaps = 51/578 (8%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L LL++ PE +R+++ EHP+ LIEVVMDLGR P RF S L ++ ++H
Sbjct: 17 LDELLSIFPEPIRLKLIEHPQKDNLIEVVMDLGRLPEGRFASEASYLGQTPVSKEDLQHC 76
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
+VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRAV G+ ++++L++ G S+
Sbjct: 77 IERVGIFSSDNRAGIERTLHRISAIRNRAGDIIGLTCRIGRAVFGTIIMIRELIETGQSV 136
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 137 LLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRP 196
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
E+QH+V+IEAVENHMP+VIVIDEIGT+LE++AA TIA+RG+QLV TAHG TIENLI NP+
Sbjct: 197 ELQHQVMIEAVENHMPEVIVIDEIGTELESLAARTIAERGVQLVGTAHGNTIENLIKNPT 256
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L LIGG+Q VTLGD+EA RRG QKTVLERK P TF+ AVE++ + VH + TVD
Sbjct: 257 LSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAVAVEMLERQRWVVHEDVAQTVDN 316
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKE-------FFAETSS-------------------- 408
+L G P +IR + G + +E + A+T S
Sbjct: 317 LLRGIEPTTQIRTVDDSGEISIIHEEPTQSNNNYLAKTVSLATPLRPSGGWRASGRMTPV 376
Query: 409 ----------DEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGI 458
+ + E M+E + + E + K++ PN GED W + LY YG+
Sbjct: 377 SSLSSKQQKVNSDFEQMLEQSWQTQEPISNKVRTPG---PN-GED-WP----VYLYPYGV 427
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ + Q+I L + + LT ++ AD ++AL S++K +S ++ K IPIY K++
Sbjct: 428 GRSQLEQVIDVLNL--PIVLTKDLENADVVVALRSQIKHHSKLRQLVKHRQIPIYGVKSN 485
Query: 519 SLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
++ QIT+ LR L+ D + E DLR + ++I+ALEEAR+A+EQ+VIPKG+ VE
Sbjct: 486 TIPQITRVLRQLLNFDDPNLPEATDLRLFSQAGSDDEIEALEEARLAVEQIVIPKGQPVE 545
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR + + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 546 LLPRSAKVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 583
>gi|81299436|ref|YP_399644.1| single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
gi|81168317|gb|ABB56657.1| Single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
Length = 588
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/564 (47%), Positives = 371/564 (65%), Gaps = 28/564 (4%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L LL +LP ++R ++ HP+ L+EVV+DLGR P ARFP G LS+ ++ + +
Sbjct: 26 LDELLEILPPQLRDQLLRHPQKDRLVEVVLDLGRFPEARFPEGAEYLSETPVSREDLAYC 85
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
++VGDF DNRAGI RTLHRISAIRNRKG +IGLTCRVGRAV G+ +++DLV+ G SL
Sbjct: 86 AARVGDFGADNRAGIERTLHRISAIRNRKGEVIGLTCRVGRAVFGTVGMIRDLVETGQSL 145
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
LF+G PGVGKTT +RE+ARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARR+QV
Sbjct: 146 LFLGRPGVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRARRLQVARP 205
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP+
Sbjct: 206 ELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPT 265
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L L+GG+Q+VTLGD+EA RRG QKTVLERK P TF AVE++ + VH + TVD
Sbjct: 266 LSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRWVVHEDVANTVDL 325
Query: 376 ILSGRIPNVEIRRMQHDG-------------SKETVEKEFFAETSS---DEEDEMM---- 415
+L PN ++R + DG +V ++ ++ TS M
Sbjct: 326 LLRQGQPNPQVRTLSEDGRVLIAPAFKDAPKQPASVTQQTWSHTSDRGWRSSGRMRPLPP 385
Query: 416 VEDAMEVTEE-RTGKIQFISEFPPNIGEDCWEDG--LLIRLYVYGILEATVVQLIKQLQM 472
V D E+ R ++ F ++ +G L + +Y Y + + Q+I LQ+
Sbjct: 386 VLDVPTTREDLRDPEVAFEQALATDVARPVGPNGEELPLHVYPYAVSRHYLEQVIDTLQL 445
Query: 473 DDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALID 532
V LT ++++AD +LAL LK S ++ A++H +PI+ K++++ QI +ALR L++
Sbjct: 446 --PVLLTKDLADADVVLALRGNLKGQSKLRHVARNHHVPIHVIKSNTMPQIVRALRRLLN 503
Query: 533 DHT---GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQID 589
E +L K +++I+ALEEAR+A+EQ+V+PKG+ VELLPR + + +Q +
Sbjct: 504 QEQLDEPETVNLELFTKAGKNDEIEALEEARLAVEQIVLPKGQPVELLPRSAIVRKMQHE 563
Query: 590 LIRKYQLHYQRVGKEPDARLRILP 613
L+ Y+L G+EP+ RLRI P
Sbjct: 564 LVEHYRLKSASFGEEPNRRLRIFP 587
>gi|30681303|ref|NP_850553.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|12322790|gb|AAG51387.1|AC011560_19 unknown protein; 108050-105786 [Arabidopsis thaliana]
gi|332641383|gb|AEE74904.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 547
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/466 (54%), Positives = 338/466 (72%), Gaps = 39/466 (8%)
Query: 74 IELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+EL L +LP R + +H + ELIEVVMDLGRKPLARFPSGD+ +S+ +T +E
Sbjct: 95 VELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPSGDWVISEQPVTHQDLE 154
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
A S+VGDF+ DNR+GI R+LHRISAIRNRK +IGLTCRVGR VSGSA +++DL++ G
Sbjct: 155 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 214
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
S+L IG PGVGKTT+IREIAR+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARRMQVP
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 274
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
N +QH V+IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLVATAHG+TI+N+I N
Sbjct: 275 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 334
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATV 373
PSL++LIGG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++S+TE RVH L+ TV
Sbjct: 335 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 394
Query: 374 DAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKI--- 430
DAIL+G+ EIR+++ + D +++ +E EE +
Sbjct: 395 DAILAGKSAPFEIRQIRGE---------------DDVPHKLVTPIPLENLEEEPAPLLNR 439
Query: 431 QFISEFPPNIGEDCWEDGLLIR------------------LYVYGILEATVVQLIKQLQM 472
F+SE + +D ED LLIR +Y Y +LEA ++Q+ + + +
Sbjct: 440 DFVSEL---LSDDEDEDFLLIRSNKARSNTYTSPRSSPVHVYTYNVLEADLLQVAEVMGL 496
Query: 473 DDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
DD +++TD++ EAD +LA S+LK+NS I+ AK H +PI+ K S
Sbjct: 497 DDEIEVTDDVGEADVILASSSELKQNSSIRRVAKLHKLPIFVIKVS 542
>gi|218441457|ref|YP_002379786.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 7424]
gi|218174185|gb|ACK72918.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7424]
Length = 605
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/576 (46%), Positives = 367/576 (63%), Gaps = 45/576 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP ++ + +HP +L+EVVMDLGR P ARF G L + ++ ++H
Sbjct: 37 DLNQLLDILPPQIHSIIEQHPNRNQLVEVVMDLGRLPEARFSQGAIDLGNTPVSKEDLQH 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRA+ G+ +++DLV+ G S
Sbjct: 97 CINRVGSFSGDNRAGIERTLHRISAIRNRTGEIIGLTCRIGRAIFGTIAMIEDLVETGQS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+DY KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 ILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG I+NLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIDNLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF AVE++ + VH + TVD
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHEDVAETVD 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR P ++IR + +G E + +E + + V +R +
Sbjct: 337 NLLRGREPILQIRTVDENG-----EVQITSEQPQTHAPSSLSKSVTSVAPDRPTGWRASG 391
Query: 435 EFPP-----------------NIGEDCW-----------------EDGLLIRLYVYGILE 460
P + E W ED L + +Y YGI
Sbjct: 392 RMTPVTPLGTTHKNGKTLDFDRMLEQSWLHQEPVTEKVRTPGPNGED-LPVYVYPYGISR 450
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
+ + Q+++ L + AV T ++ EADA+LAL S +K +S ++ AK IPIY K++++
Sbjct: 451 SQLDQVVELLNLPVAV--TKDLKEADAVLALRSHVKNHSKLRQIAKGQQIPIYGIKSNTI 508
Query: 521 VQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
QI++ L+ L+ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELL
Sbjct: 509 PQISRGLQRLLGIDDPKLPEAFDLRLFTQGGNDDEIEALEEARLAVEQIVIPTGQPVELL 568
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + I +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 569 PRSAKIRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 604
>gi|307155037|ref|YP_003890421.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7822]
gi|306985265|gb|ADN17146.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7822]
Length = 605
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/576 (46%), Positives = 374/576 (64%), Gaps = 45/576 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LP ++R + +HP+ L+EVVMDLGR P ARF L + ++ ++H
Sbjct: 37 DLNQLLAILPPQIREIIEQHPKHSHLVEVVMDLGRLPEARFADVAIDLGNTPVSKEDLQH 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRA+ G+ ++++DLV+ G S
Sbjct: 97 CIHRVGSFSGDNRAGIERTLHRISAIRNRTGEIIGLTCRIGRAIFGTISMIEDLVETGQS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+DY KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 157 ILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLIKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF AVE++ + VH + TVD
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFQIAVEMLERQRWVVHEDVAETVD 336
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEER------TG 428
+L GR P +++R + G E + E S + M + A V R +G
Sbjct: 337 NLLRGREPVLQVRTVDEHG-----EVKITQEESQPVINGTMAKSATSVAPARPTGWRASG 391
Query: 429 KIQFISEFPPN-----------IGEDCW-----------------EDGLLIRLYVYGILE 460
++ ++ + + E W ED L + +Y YGI
Sbjct: 392 RMAPVTPLASSHKNGKTLEFDRMLEQSWLQEEPVTEKVRTPGPNGED-LPVYVYPYGISR 450
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
+ + Q+I L + V +T +++ ADA+LAL S +K +S ++ +K+ +PIY K++++
Sbjct: 451 SQLDQVIDLLNL--PVSVTKDLNGADAVLALRSHVKNHSKLRQISKARQVPIYGIKSNTI 508
Query: 521 VQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
QI++ L+ L+ D E DLR + ++I+ALEEAR+A+EQ+VIP G+ VELL
Sbjct: 509 PQISRGLQRLLGMDDPKLPEAFDLRLFTRGGNDDEIEALEEARLAVEQIVIPTGQPVELL 568
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + I +Q +L+ Y+L +G+EP+ RLRI P
Sbjct: 569 PRSAKIRKMQHELVEHYRLQSDSLGEEPNRRLRIYP 604
>gi|22298282|ref|NP_681529.1| hypothetical protein tlr0740 [Thermosynechococcus elongatus BP-1]
gi|22294461|dbj|BAC08291.1| ycf45 [Thermosynechococcus elongatus BP-1]
Length = 567
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 270/566 (47%), Positives = 374/566 (66%), Gaps = 25/566 (4%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD D +LLA+LP + +++HP+ EL+E+V+DLGR P ARF L++ +
Sbjct: 11 VTDDLD----QLLAILPPPLGQSLTDHPQREELLEIVLDLGRLPEARFIHSTQYLAETPV 66
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ +++A +VG+F+ DNRAGI RTLHRISA+RNR+G IIGLTCRVGRAV G+ +++D
Sbjct: 67 SREMLQYAVDRVGEFSGDNRAGIERTLHRISALRNRQGTIIGLTCRVGRAVFGTIGMIRD 126
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 127 LVESGQSILLLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGKA 186
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG I
Sbjct: 187 RRMQVARPELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAHGNQI 246
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENL+ NP+L L+GG+Q+VTLGDEEA RRG QK+VLERK P TF AVE++ + VH
Sbjct: 247 ENLMKNPTLADLVGGIQSVTLGDEEARRRGTQKSVLERKAPPTFQMAVEMLERDRWVVHL 306
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGS---------KETVEKEFFAETSSDEEDEMMVED 418
+ A+VD +L GR P EIR + DGS + +E + E S E M+
Sbjct: 307 DVAASVDLLLRGRQPVPEIRSIAADGSVVISRPEPAPQRLEVKSVPERPSWRESGQML-P 365
Query: 419 AMEVTEE--RTGKIQFISEF--PPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDD 474
++ +E R Q + P +G + E L + ++ Y + + Q ++ L +
Sbjct: 366 VVDANKEPLRANFAQLLEATLDAPTVGPNGEE--LPLHVFPYAVSRHHLEQAVRTLNL-- 421
Query: 475 AVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI--- 531
+ +T +I +AD +L L S LK S ++ A H +PI+A K +S+ QI + LR L+
Sbjct: 422 PIIVTKDIDQADVILTLRSHLKGESKLRHLAHIHHLPIHAIKANSMAQIVRGLRHLLGIE 481
Query: 532 DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLI 591
D E DL ++++ALEEAR+A+E++VIPKG++VELLPR + I +Q +LI
Sbjct: 482 DPSPAESADLSLFSPTGSDDELEALEEARLAVEEIVIPKGQAVELLPRSAKIRRMQHELI 541
Query: 592 RKYQLHYQRVGKEPDARLRILPFQTR 617
YQL G+EP+ RLRI P +R
Sbjct: 542 EHYQLTSCSFGEEPNRRLRIYPNLSR 567
>gi|440684212|ref|YP_007159007.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
gi|428681331|gb|AFZ60097.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
Length = 579
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/582 (47%), Positives = 374/582 (64%), Gaps = 52/582 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP LS+ + I+
Sbjct: 6 DLQKLLDILPQDLRQVLENHPKRDSLVEVVLDLGRRPEARFPHEAEYLSETTVNQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDI HP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDFNKRVVIIDTSNEIAGDGDIAHPAIGRARRMQVAK 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH ++ TVD
Sbjct: 246 TLCDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHETVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFF------AETSSDEED--------------EM 414
+L GR PN + R + G K + ++ SDEE +M
Sbjct: 306 TLLRGRQPNPQTRTVDEKG-KVAISRQLSVVNGRGGSLPSDEESFPAVKQANGWRSSGQM 364
Query: 415 MVEDAMEVTEER-TGKIQF-------------------ISEFPPNIGEDCWEDGLLIRLY 454
+ + + ER TG+ +F + PN GED L + +Y
Sbjct: 365 VALPPLSLERERVTGRSEFDRLLDESFNYSESIDFSTSTKQAGPN-GED-----LPLHIY 418
Query: 455 VYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYA 514
YG+ + Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+
Sbjct: 419 PYGVSRHQLEQVISVLSL--PVILTKDIDNADAILALRSHVKNHAKLRQMAKARHVPIHV 476
Query: 515 TKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKG 571
K+S++ QIT+ LR L+ D G+ ++L+ +++DALEEAR+A+EQ+VIPKG
Sbjct: 477 IKSSTIPQITRGLRRLLNIDDPEMGDDRELQLLLHRGGDDEMDALEEARLAVEQIVIPKG 536
Query: 572 ESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ VELLPR S + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 537 QPVELLPRSSQVRKMQHELVEHYRLKSDSFGEEPNRRLRIYP 578
>gi|126659203|ref|ZP_01730341.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
gi|126619508|gb|EAZ90239.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
Length = 576
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/572 (46%), Positives = 371/572 (64%), Gaps = 35/572 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP +R ++ +HP L+EVVMDLGR P ARFP L D ++ +++
Sbjct: 6 DLSKLLDILPSSIRNQIKDHPNCDRLVEVVMDLGRLPEARFPGEAIYLGDTPVSASDLQY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F+ DNRAGI RTLHRISAIRNR G IIGLTCRVGRAV G+ ++++DLV+ G S
Sbjct: 66 SIQRVGIFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTISMIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 LLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAA 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QHKV+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 186 PELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + + VH + T+D
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVVHDDVAYTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--------FFAETSSD---EEDEMMVEDAM--- 420
+L PN ++R + +G+ + ++E F D + M
Sbjct: 306 ILLRNGQPNPQVRTVDENGNVQITQEEPDLTPNPASFGRGMGDMIQQPKGWRASGKMTPV 365
Query: 421 -EVTEERTGKIQFISEF----------PPNIGEDCWEDG-----LLIRLYVYGILEATVV 464
++ K+ +SEF P G+ G + +Y YGI + +
Sbjct: 366 ATFGSKKGNKLSSVSEFDRLLDASWSQPEPKGDKVRVPGPNGEDFPVYIYPYGIGRSQLE 425
Query: 465 QLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQIT 524
Q+I+ L + + LT ++ AD ++AL S LK S ++ AK+ +PI+ K++++ QIT
Sbjct: 426 QVIEVLNL--PIVLTKDLDSADVVVALRSHLKNQSKLRQVAKARQVPIHGIKSNTIPQIT 483
Query: 525 KALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPS 581
+ L+ L+ + T E DLR + + ++++ALEEAR+A+EQ+V+PKG+ VELLPR
Sbjct: 484 RTLQRLLGMDEAKTPETADLRLFTRGSNDDELEALEEARLAVEQIVLPKGQPVELLPRSP 543
Query: 582 YILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 544 KVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 575
>gi|170079165|ref|YP_001735803.1| ATPase like protein [Synechococcus sp. PCC 7002]
gi|169886834|gb|ACB00548.1| ATPase like protein [Synechococcus sp. PCC 7002]
Length = 591
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/587 (46%), Positives = 382/587 (65%), Gaps = 53/587 (9%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD + +LL +LP+ +R R+++HP LIEVVMDLGR P ARF + L D I
Sbjct: 16 VTDDLE----KLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPI 71
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ ++++ +VG F+ DNRAGI RTLHRISA+RNR+G I+GLTCR+GRAV G+ ++Q+
Sbjct: 72 SREDLQYSVERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQE 131
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDIPH IG A
Sbjct: 132 LVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGDGDIPHSAIGRA 191
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QHKV+IEAVENHMP+VI+IDEIGT+LEA AA TIA+RG+QLV TAHG I
Sbjct: 192 RRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRI 251
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA +R QKTVLERK P TF AVE++ + VH
Sbjct: 252 ENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHS 311
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGS-KETVEKEFFAETSS-DEEDEMMVEDAMEVTEE 425
+ T+D +L G P +E+R + G+ K T E E E + + + +M E +
Sbjct: 312 DVSITIDTLLRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLR 371
Query: 426 RTGKI--------------------------QFISEFP----------PNIGEDCWEDGL 449
+GK+ +I+ P PN GED
Sbjct: 372 ASGKMAPLPFGSQKKKLVSPRSNALDPLIDQSWIARDPQQQEKVRVPGPN-GED-----Y 425
Query: 450 LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHD 509
+ +Y YG+ + + Q+I+ L++ ++LT ++ ADA+LAL S+LK +S ++ A++
Sbjct: 426 PVYVYPYGVGRSQLEQVIEILRL--PIELTKDLEGADAVLALRSQLKNHSKLRQIAQTCH 483
Query: 510 IPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQV 566
+PI+A K++++ QIT+ LR ++ D E DLR + N ++IDALEEAR+A+EQ+
Sbjct: 484 VPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQI 543
Query: 567 VIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VIP+G+ VELLPR + I +Q +LI Y+L G+EP+ RLRI P
Sbjct: 544 VIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFP 590
>gi|428780211|ref|YP_007171997.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
gi|428694490|gb|AFZ50640.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
Length = 602
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/572 (46%), Positives = 371/572 (64%), Gaps = 32/572 (5%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD D LLA LP E+ ++ HP+ ELIEVV+DLGRKP ARF + L + +
Sbjct: 36 VTDDLDT----LLATLPPEISSTLTNHPQRGELIEVVIDLGRKPEARFANNWEYLREEPV 91
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T I+ + +VG F+ DNRAGI RTLHRISA+RNR G I+GLTCR+GRAV G+ +++D
Sbjct: 92 TREDIQFCSDRVGMFSGDNRAGIERTLHRISAMRNRGGEIVGLTCRIGRAVYGTIGMIRD 151
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 152 LVETGRSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPSIGRA 211
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 212 RRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRL 271
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
+NLI NP+L LIGG+Q VTLGDEEA RRG QKTVLERK TF AVE++ + VH
Sbjct: 272 DNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRWVVHQ 331
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAM---EVTE 424
+ T+D L G P E+R G E + ++++ + +++ +
Sbjct: 332 EVSETIDQFLRGHDPATEVRLANEQGEVEIYTEAGSSKSTPYGNGKTHLQNPVLPRPTGW 391
Query: 425 ERTGKIQFISEFPPNIGE------DCWEDG---------------LLIRLYVYGILEATV 463
+G++ + PP+ E W+ + +Y YGI +
Sbjct: 392 RASGQMTPVESSPPHNPEFEQLLDQSWQQADQSKKVRTPGPNGEDWPVYVYPYGISRNLL 451
Query: 464 VQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQI 523
Q+++ L++ V LT +I ADA++AL S++K +S ++ AK+ ++PI+ K+++L QI
Sbjct: 452 DQVLELLKL--PVVLTKDIESADAVIALRSQVKNHSKLRQMAKNKEVPIHVVKSNTLPQI 509
Query: 524 TKALRAL--IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPS 581
T+ L+ L +D T E D R + + ++++ALEEAR+A+EQ+VIPKG+ VELLPRP+
Sbjct: 510 TRTLQRLLDLDPTTAEGIDFRMFTEGSSQDEMEALEEARLAVEQIVIPKGQPVELLPRPA 569
Query: 582 YILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ +Q +L Y+L G+EP+ RLRI P
Sbjct: 570 NVRKMQHELAEHYRLQSNSFGEEPNRRLRIYP 601
>gi|332711942|ref|ZP_08431872.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
gi|332349270|gb|EGJ28880.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
Length = 647
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 281/580 (48%), Positives = 364/580 (62%), Gaps = 50/580 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP E+R + +H E LIEV+MDLGR P RF LSD +T+ I H
Sbjct: 76 DLPKLLDILPAEIRSLLEQHAERDSLIEVIMDLGRFPEVRFRDRAEYLSDQPVTIEQINH 135
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 136 CVERVGSFSGDNRAGIEGTLHRISAIRNRPGEIIGLTCRVGRAVFGTIGMIRDLVETGKS 195
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV +
Sbjct: 196 ILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 255
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LV TAHG IENLI NP
Sbjct: 256 PEHQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVGTAHGNRIENLIKNP 315
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 316 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERKRWVVHESVADTVD 375
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEF-------------------------------- 402
+L GR PN +R +G K T+ +E
Sbjct: 376 NLLRGRQPNPPVRTEDENG-KVTITRELPSAPVATPLNGRSRGHLTLTTPSQPKGWRSSG 434
Query: 403 ------FAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVY 456
E E+ M + E ++ Q + PN GED L +++Y Y
Sbjct: 435 QMKPLSLQEPEPARENSMFEQLLAESWSQQELLGQGMQMLGPN-GED-----LPLQVYPY 488
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
GI + Q+I+ L + V LT N+ AD +L L S +K +S +++ AKS IPI+A K
Sbjct: 489 GISRHQIEQVIQILNL--PVVLTKNMDTADVVLGLRSHVKSHSKLKSIAKSRQIPIHAIK 546
Query: 517 TSSLVQITKALRALI--DDHT-GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGES 573
SS+ QIT+ALR L+ DD T + DL + ++I+ALEEAR+A+EQ+VIPKG+
Sbjct: 547 ASSIPQITRALRRLLHMDDPTIPDAADLELFAQNGSEDEIEALEEARLAVEQIVIPKGQP 606
Query: 574 VELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 607 VELLPRSPKVRKMQHELVEHYRLKSSSFGDEPNRRLRIYP 646
>gi|218246053|ref|YP_002371424.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 8801]
gi|257059102|ref|YP_003136990.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 8802]
gi|218166531|gb|ACK65268.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8801]
gi|256589268|gb|ACV00155.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8802]
Length = 602
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/577 (46%), Positives = 375/577 (64%), Gaps = 50/577 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
++G+LLA+LP +R + HP+ +LIEVVMDLGR P ARFP+ L + I+ ++H
Sbjct: 37 DIGKLLAILPVNIREHIETHPQKDQLIEVVMDLGRLPEARFPNESVYLGETPISEEDLQH 96
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI RTLHRISAIRNR G IIGLTCR+GRA+ G+ ++QDLV+ G S
Sbjct: 97 CIDRVGHFSGDNRAGIERTLHRISAIRNRTGKIIGLTCRMGRAIFGTITMIQDLVETGKS 156
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG ARRMQV +
Sbjct: 157 LLLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 216
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 217 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLLKNP 276
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RRG QKTVLERK P TF A+E++ + VH + TVD
Sbjct: 277 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVVHEDVSHTVD 336
Query: 375 AILSGRIPNVEIRRMQ---------------------HDGSKETVEKE------------ 401
+L PN ++R + H S ETV++
Sbjct: 337 ILLRNGEPNPQLRTINEHGEVEISQEPPQKPPMGLLGHSASLETVDRPTGWRASGRMSPV 396
Query: 402 --FFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGIL 459
F + + E + +++++ E + K++ PN GED W + +Y YGI
Sbjct: 397 APFGTQKGTVSEFDRLLDESWH-QPESSEKVRIPG---PN-GED-WP----VYVYPYGIG 446
Query: 460 EATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSS 519
+ + Q+I+ L + + LT ++S AD ++AL S +K +S ++ AK IPI+ K+++
Sbjct: 447 RSQIEQVIEILNL--PIVLTKDLSHADVVVALRSHVKNHSKLRQMAKVRQIPIHGVKSNT 504
Query: 520 LVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVEL 576
+ QIT+ L+ ++ + E D+R + ++++ALEEAR+A+EQ+V+PKG+ VEL
Sbjct: 505 IPQITRTLQRILGMDEPKQPETADIRLFTRGGDDDELEALEEARLAVEQIVLPKGQPVEL 564
Query: 577 LPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 565 LPRSPKVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 601
>gi|428205270|ref|YP_007089623.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428007191|gb|AFY85754.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 587
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/583 (46%), Positives = 372/583 (63%), Gaps = 46/583 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP +++ + +HP+ LIEVVMDLGR+P ARFP L++ I+ I +
Sbjct: 6 DLQKLLDILPLDIKNVLEQHPQRDSLIEVVMDLGRRPEARFPDRAEYLAESGISHDQIRY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F DNRAG+++TLHRISAIRNR G IIGLTCRVGRAV G+ ++ DLV+ G S
Sbjct: 66 SIQRVGHFGGDNRAGLAQTLHRISAIRNRAGDIIGLTCRVGRAVFGTIGMIHDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GD+PHP IG ARRMQV
Sbjct: 126 ILLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PEFQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q+VTLGD+EA RR QKTVLERK P TF AVE++ + +H S+ TVD
Sbjct: 246 TLSDLVGGIQSVTLGDDEARRRRTQKTVLERKAPPTFEIAVEMLERQRWTIHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEK--------------EFFAETSSDEEDEMMVEDAM 420
A+L GRIPN ++R + DG V + + + +E+E + M
Sbjct: 306 ALLRGRIPNPQLRTVDADGKVTIVRQSPTPLRGVGQDGFGRGYEVGNPRQEEESKLSPTM 365
Query: 421 EVTEER-TGKIQFISEFP-PNIGEDCWE-------------------------DGLLIRL 453
V R TG++ ++ P P E +E + L + +
Sbjct: 366 TVGGWRSTGRMIPLAAVPEPATREQEFERLLDESLARSDRFNSDLAVNAGPNGEDLPLHI 425
Query: 454 YVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIY 513
Y YG+ + Q I+ L + V LT +I ADA+LAL S +K S ++ AK+ +PI+
Sbjct: 426 YPYGVSRHQLEQAIQVLSL--PVVLTKDIDSADAILALRSHVKNQSKLRHVAKARHVPIH 483
Query: 514 ATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI--NLSE-KIDALEEARVAIEQVVIPK 570
K++++ QI + LR L+D D R N SE ++DALEEAR+A+EQ+VIPK
Sbjct: 484 TLKSNTIPQIIRTLRRLLDMDEPVVPDERELSLFIQNGSEDELDALEEARLAVEQIVIPK 543
Query: 571 GESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
G+ VELLPR + + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 544 GQPVELLPRSAKVRKMQHELVEHYRLKSDSFGDEPNRRLRIYP 586
>gi|427730839|ref|YP_007077076.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
gi|427366758|gb|AFY49479.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
Length = 578
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/575 (47%), Positives = 377/575 (65%), Gaps = 39/575 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQILENHPKRDSLVEVVLDLGRRPEARFPNQAEYLSEIPVTQEQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAE-------TSSDE-------------EDEM 414
+L GR PN + R + G K +V ++ T +DE +M
Sbjct: 306 TLLRGRQPNPQTRTVDDQG-KVSVTRQLAVVNGRGEHLTVADELSSPVRQTNGWRSSGQM 364
Query: 415 MVEDAMEVTEER-TGKIQF---------ISE-FPPNIGEDCWEDG--LLIRLYVYGILEA 461
+ A+ + ER +G+ +F SE N+ +G L + +Y YG+
Sbjct: 365 VALPALPLERERVSGRSEFDRLLDESFNYSETIDFNVNRQAGPNGEDLPLHIYPYGVSRH 424
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
+ Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S++
Sbjct: 425 QLEQVINVLTL--PVVLTKDIDSADAILALRSHVKNHAKLRQMAKARHVPIHMIKSSTIP 482
Query: 522 QITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLP 578
QIT+ +R L+ D G+ ++L+ ++IDALEEAR+A+EQ+VIPKG+ VELLP
Sbjct: 483 QITRGVRRLLNIDDPEIGDERELQLFLHNGSDDEIDALEEARLAVEQIVIPKGQPVELLP 542
Query: 579 RPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
R + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 543 RSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 577
>gi|56750908|ref|YP_171609.1| hypothetical protein syc0899_c [Synechococcus elongatus PCC 6301]
gi|56685867|dbj|BAD79089.1| hypothetical protein YCF45 [Synechococcus elongatus PCC 6301]
Length = 588
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/573 (46%), Positives = 373/573 (65%), Gaps = 32/573 (5%)
Query: 67 SVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQ 126
+V D+ D LL +LP ++R ++ HP+ L+EVV+DLGR P ARFP G LS+
Sbjct: 21 TVVDNLD----ELLEILPPQLRDQLLRHPQKDRLVEVVLDLGRFPEARFPEGAEYLSETP 76
Query: 127 ITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQ 186
++ + + ++VGDF DNRAGI RTLHRI AIRNRKG +IGLTCRVGRAV G+ +++
Sbjct: 77 VSREDLAYCAARVGDFGADNRAGIERTLHRIGAIRNRKGEVIGLTCRVGRAVFGTVGMIR 136
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
DLV+ G SLLF+G P VGKTT +RE+ARVLA+D KRV+I+DTS+EI G+GDIPHP IG
Sbjct: 137 DLVETGQSLLFLGRPDVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGR 196
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
ARR+QV E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG
Sbjct: 197 ARRLQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQ 256
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVH 366
IENLI NP+L L+GG+Q+VTLGD+EA RRG QKTVLERK P TF AVE++ + VH
Sbjct: 257 IENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRWVVH 316
Query: 367 HSLEATVDAILSGRIPNVEIRRMQHDG-------------SKETVEKEFFAETSS---DE 410
+ TV +L PN ++R + DG +V ++ ++ TS
Sbjct: 317 EDVANTVGLLLRQGQPNPQVRTLSEDGRVLIAPAFKDAPKQPASVTQQTWSHTSDRGWRS 376
Query: 411 EDEMM----VEDAMEVTEE-RTGKIQFISEFPPNIGEDCWEDG--LLIRLYVYGILEATV 463
M V D E+ R ++ F ++ +G L + +Y Y + +
Sbjct: 377 SGRMRPLPPVLDVPTTREDLRDPEVAFEQALATDVARPVGPNGEELPLHVYPYAVSRHYL 436
Query: 464 VQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQI 523
Q+I LQ+ V LT ++++AD +LAL +LK S ++ A++H +PI+ K++++ QI
Sbjct: 437 EQVIDTLQL--PVLLTKDLADADVVLALAGQLKGQSKLRHVARNHHVPIHVIKSNTMPQI 494
Query: 524 TKALRALIDDHT---GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRP 580
+ALR L++ E +L K +++I+ALEEAR+A+EQ+V+PKG+ VELLPR
Sbjct: 495 VRALRRLLNQEQLDEPETVNLELFTKAGKNDEIEALEEARLAVEQIVLPKGQPVELLPRS 554
Query: 581 SYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 555 AIVRKMQHELVEHYRLKSASFGEEPNRRLRIFP 587
>gi|37523337|ref|NP_926714.1| hypothetical protein gvip509 [Gloeobacter violaceus PCC 7421]
gi|35214341|dbj|BAC91709.1| ycf45 [Gloeobacter violaceus PCC 7421]
Length = 535
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/558 (49%), Positives = 365/558 (65%), Gaps = 38/558 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD + +LLA+LP ++ R+ H L EL+EVV+DLGR+P ARF G LS+ +
Sbjct: 3 VTDDLE----KLLAILPVPLQERLHAHERLDELVEVVLDLGRRPEARFREGSDYLSEIPV 58
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T ++ T++VG+F+ DNRAGI RTLHRISA+RNR G IIGLTCRVGRAV G+ +++D
Sbjct: 59 TQDELDGCTARVGEFSGDNRAGIERTLHRISAMRNRHGKIIGLTCRVGRAVFGTIGMIRD 118
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 119 LVESGRSILLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRA 178
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 179 RRMQVARPEYQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNKL 238
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
+NLI NP+L LIGG+Q VTLGDEEA RRG QK+VLERK P TF AVE+ + + VH
Sbjct: 239 DNLIKNPTLSDLIGGIQTVTLGDEEARRRGTQKSVLERKAPPTFEIAVEMQERYKWIVHK 298
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ TVD +L R P E R + G K +V +E S E DE + RT
Sbjct: 299 DVAETVDYLLRDRKPLPETRALNGAG-KVSVTREL----SEAEWDEPLT--------TRT 345
Query: 428 GKIQFISEFPPNIGEDCWE---DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISE 484
G P +G E DG +R+Y Y + + + +++ L V LT I E
Sbjct: 346 GSWHSPVPVVP-LGAMEMEADFDGSRVRIYPYAVSRSHLERIVNTLGY--PVLLTKEIDE 402
Query: 485 ADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI---------DDHT 535
AD +LAL S ++ I A A++ IP++ K +++ IT+ALR ++ D
Sbjct: 403 ADVVLALRSHVRDKGKIAAVAQNRQIPVHTVKANTIPHITRALRRILQIDEPGIPGDLDA 462
Query: 536 GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQ 595
G F L SED +++A+EEAR+A+EQ+V+PKG+ VELLPR +I +Q +L+ Y+
Sbjct: 463 GLFGSLDSED------ELEAMEEARLAVEQIVLPKGQPVELLPRAPHIRKMQHELVEHYR 516
Query: 596 LHYQRVGKEPDARLRILP 613
L + G+EP+ RLRI P
Sbjct: 517 LKSESFGQEPNRRLRIYP 534
>gi|119512852|ref|ZP_01631918.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
gi|119462480|gb|EAW43451.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
Length = 578
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/578 (47%), Positives = 375/578 (64%), Gaps = 45/578 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQVLESHPQRDSLVEVVLDLGRCPEARFPNQAEYLSETPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGTFSGDNRAGIELTLHRISAIRNRSGRIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GD+PHP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVAQ 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + +H S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVIHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFF------AETSSDEED--------------EM 414
+L GR P+ + R + G K V ++ + S EE +M
Sbjct: 306 TLLRGRQPSPQTRTVDDQG-KVAVTRQLSVVNGRGGQVSPREESFPPARPTNGWRSSGQM 364
Query: 415 MVEDAMEVTEER-TGKIQF---------ISE-FPPNIGEDCWEDG--LLIRLYVYGILEA 461
+ + + ER TG+ +F SE F +G L + +Y YG+
Sbjct: 365 VALPPLSLERERMTGRTEFDRLLDESFNYSESFDVKTSRHAGPNGEDLPLHIYPYGVSRH 424
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
+ Q+I L + V LT +I ADA+LAL S +K + ++ AK+ +PI+ K+S++
Sbjct: 425 QLEQVIGVLTL--PVVLTKDIDTADAILALRSHVKNQAKLRQMAKARHVPIHMIKSSTIP 482
Query: 522 QITKALRALIDDHTGEFKDLRSEDKINL------SEKIDALEEARVAIEQVVIPKGESVE 575
QIT+ LR L++ E D+ + ++ L +++DALEEAR+A+EQ+VIPKG+ VE
Sbjct: 483 QITRGLRRLLNI---EDPDMTDDPELQLFLHSGTDDEMDALEEARLAVEQIVIPKGQPVE 539
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR S + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 540 LLPRSSPVRKMQHELVEHYRLKSDSFGEEPNRRLRIYP 577
>gi|75906351|ref|YP_320647.1| single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
gi|75700076|gb|ABA19752.1| Single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
Length = 579
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/576 (47%), Positives = 377/576 (65%), Gaps = 40/576 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQVLENHPKRDSLVEVVLDLGRRPEARFPNQAEYLSETPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CVQRVGNFGGDNRAGIEQTLHRISAIRNRSGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQ----------------HDGSKETVEKEFFAETSSD---EEDEMM 415
+L GR P+ + R + G T E+ F +S+ +M+
Sbjct: 306 TLLRGRQPSPQTRTVDDQGKVAITRQLSVVNGRGGQLATPEESFSPARASNGWRASGQML 365
Query: 416 VEDAMEVTEER-TGKIQFIS------EFPPNI--GEDCWEDG-----LLIRLYVYGILEA 461
++ + ER +G+ +F +P I G + G L + +Y YG+
Sbjct: 366 AIPSLPLERERISGQSEFDRLLDESFNYPEAIDFGSSARQPGPNGEDLPLHIYPYGVSRH 425
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
+ Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S++
Sbjct: 426 QLEQVISVLTL--PVVLTKDIDNADAILALRSHVKNHAKLRQMAKARHVPIHVIKSSTIP 483
Query: 522 QITKALRALIDDHTGEFKDLRSEDKINL----SEKIDALEEARVAIEQVVIPKGESVELL 577
QIT+ LR L++ E D R E ++ L +++DALEEAR+A+EQ+VIPKG+ VELL
Sbjct: 484 QITRGLRRLLNLDDPEIADDR-ELQLFLHNGSDDEMDALEEARLAVEQIVIPKGQPVELL 542
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 543 PRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 578
>gi|427723001|ref|YP_007070278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
gi|427354721|gb|AFY37444.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
Length = 594
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/592 (45%), Positives = 378/592 (63%), Gaps = 61/592 (10%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD + +LL +LPE + +++ HP ELIEVVMDLGR P ARF G L + I
Sbjct: 17 VTDDLE----KLLTILPEPLHKQLATHPRRDELIEVVMDLGRIPEARFVEGTEDLGEVVI 72
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T + ++ ++VG F+ DNRAGI RTLHRISA+RNR+G I+GLTCR+GRAV G+ ++Q+
Sbjct: 73 TSEDLAYSVNRVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQE 132
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GD+PH IG A
Sbjct: 133 LVESGKSILLLGRPGVGKTTALREIARVLADDVGKRVVIIDTSNEIAGDGDVPHSAIGRA 192
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV + E QH+V+IEAVENHMP+VI+IDEIGT+LEA AA TIA+RG+QLV TAHG I
Sbjct: 193 RRMQVASPEQQHRVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRI 252
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q VTLGDEEA +R QKTVLERK P TF AVE++ + + VH
Sbjct: 253 ENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQKWVVHE 312
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVE---------------------------- 399
+ T+D +L G P +EIR + +G+ + E
Sbjct: 313 DVSITIDTLLRGHQPLLEIRTVDDEGNVKVSEEMEHPIEIPEWNPQTPLKSEPQPSRPRG 372
Query: 400 ---------------KEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDC 444
K+ F + SS D+M+ + + K++ PN GED
Sbjct: 373 LRASGKMTPLPFGSKKKKFQKRSSASLDQMIDQSWTARDPHQAEKVRTPG---PN-GEDY 428
Query: 445 WEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAA 504
+ +Y YG+ + + Q+I+ L++ + LT ++ ADA+LAL S+LK +S ++
Sbjct: 429 -----PVYVYPYGVGRSQLEQVIEILRL--PIVLTKDLPSADAVLALRSQLKNHSKLRDI 481
Query: 505 AKSHDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARV 561
A+ +PI+A K++++ QIT+ LR L+ D + E D+R + N ++IDALEEAR+
Sbjct: 482 AQDQQVPIHAVKSNTIPQITRGLRRLLNMDDPNVKEPTDIRLFSQSNSDDEIDALEEARL 541
Query: 562 AIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
A+EQ+VIP+G+ VELLPR + I +Q +LI Y+L G+EP+ RLRI P
Sbjct: 542 AVEQIVIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFP 593
>gi|300863790|ref|ZP_07108717.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
gi|300338218|emb|CBN53863.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
Length = 586
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/585 (46%), Positives = 368/585 (62%), Gaps = 51/585 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL ++PEE+R + +HP+ LIE+VMDLGR+P ARFPS LS+ ++ + H
Sbjct: 6 DLNKLLDIVPEEIRRPIKQHPQRDRLIEIVMDLGRRPEARFPSKAEYLSETLVSKESLNH 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VGDF DNRAGI +TLHRISAIRNR G +IGLT RVGRAV G+ L++DLV+ G S
Sbjct: 66 CIQRVGDFGGDNRAGIEQTLHRISAIRNRTGEVIGLTLRVGRAVFGTIGLIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV +
Sbjct: 126 ILLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENL+ NP
Sbjct: 186 PEFQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLVKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + +H + TVD
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVIHEHVSETVD 305
Query: 375 AILSGRIPNVEIRRMQHDG----SKETVE-----------------KEFFAETSS----- 408
+L GR PN+++R + G S+E K F E
Sbjct: 306 ILLRGRQPNLQVRSIGDSGEVIVSQEMAAVPTNPAGVVGASSFGSGKTTFPEAQGWRGSG 365
Query: 409 -----DEEDEMMVEDAMEVTEERTGKIQFISE------------FPPNIGEDCWEDGLLI 451
E +++E R + Q + E + N G + ED L +
Sbjct: 366 KMIPLPPPKEQFAAKPAQLSEARYFE-QLLDESLSVDPVLPEGRYSRNAGPNG-ED-LPL 422
Query: 452 RLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIP 511
+Y YGI + Q+I L + V LT +I AD +LAL S ++ S ++ AK+ +P
Sbjct: 423 HIYPYGIPRHQLEQVIATLNL--PVVLTKDIDSADVVLALRSNVRNQSKLRHLAKTRQVP 480
Query: 512 IYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVI 568
++ K +L + +ALR L+ D T E DL S++I+ALEE R+A+EQ+VI
Sbjct: 481 LHTIKAGTLPLVARALRRLLDMDDPGTPEMADLGLFAHSGSSDEIEALEETRLAVEQIVI 540
Query: 569 PKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PKG+ VELLPR S++ +Q +L+ Y L G+EP+ RLRI P
Sbjct: 541 PKGQPVELLPRSSHVRKMQHELVEHYHLKSHSFGEEPNRRLRIYP 585
>gi|298491066|ref|YP_003721243.1| single-stranded nucleic acid-binding R3H domain-containing protein
['Nostoc azollae' 0708]
gi|298232984|gb|ADI64120.1| single-stranded nucleic acid binding R3H domain protein ['Nostoc
azollae' 0708]
Length = 579
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/581 (47%), Positives = 371/581 (63%), Gaps = 50/581 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQELENHPKRDYLVEVVLDLGRRPEARFPHAAEYLSETPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDI H IG ARRMQV
Sbjct: 126 ILMLGCPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIAHSAIGRARRMQVAK 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMMERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGS-----KETVEKEFFAETSSDEED--------------EMM 415
+L GR N + R M +G + +V + +S+EE +M+
Sbjct: 306 TLLRGRQANPQTRSMDENGKVAITRQLSVVQGRGGNLASEEESLPAVKQVNGWRSSGQMV 365
Query: 416 VEDAMEVTEER-TGKIQF-------------------ISEFPPNIGEDCWEDGLLIRLYV 455
+ + ER TG+ +F PN GED L + +Y
Sbjct: 366 ALPPLSIERERVTGRSEFDRLLDESFNYSSDSIDFSHTKSAGPN-GED-----LPLHIYP 419
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YG+ + Q+I L + V LT +I DA+LAL S +K ++ ++ AK+ +PI+
Sbjct: 420 YGVSRHQLEQVISVLTL--PVVLTKDIDSGDAILALRSHVKNHAKLKQIAKARHLPIHVI 477
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K+S++ QIT+ LR L+ D G+ ++L+ ++IDALEEAR+A+EQ+VIPKG+
Sbjct: 478 KSSTIPQITRGLRRLLNIDDPEIGDDRELQLLLHSGSDDEIDALEEARLAVEQIVIPKGQ 537
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 538 PVELLPRSPQVRRMQHELVEHYRLKSNSFGEEPNRRLRIYP 578
>gi|428305288|ref|YP_007142113.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
gi|428246823|gb|AFZ12603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
Length = 589
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 275/577 (47%), Positives = 364/577 (63%), Gaps = 41/577 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LPE++R + +HP+ LIEVVMDLGR P ARFP+ L + ++ I +
Sbjct: 15 DLSKLLHILPEQIRSSLEKHPQQESLIEVVMDLGRLPEARFPNKAEYLGETPVSKEDINY 74
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F+ DNRAGI RTLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 75 CIQRVGLFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTIAMIRDLVETGNS 134
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 135 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 194
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 195 PELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVGTAHGNHIENLIKNP 254
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RR QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 255 TLSDLVGGIQAVTLGDDEARRRASQKTVLERKAPPTFEIAVEMLERHRWVVHESVSDTVD 314
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEER-TGKIQ-- 431
+L R P+ ++R + G T+ +E E A V R +G++Q
Sbjct: 315 TLLRNRKPSPQVRTVNESGHV-TITRELPEVAPKLASSLQTPESAPNVRGWRSSGQMQPM 373
Query: 432 -------FISEFPPNIGED---------CWE----------------DGLLIRLYVYGIL 459
I GE+ W + L + +Y YGI
Sbjct: 374 PVSKAEIKIRPLADEFGEENSFEQLLDSSWHQQDIYAREHEISGPNGEDLPLHVYPYGIS 433
Query: 460 EATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSS 519
+ Q+I+ L + V LT + ADA+LAL S +K +S ++ +K+ IPI++ K S+
Sbjct: 434 RQQLDQVIEVLNL--PVVLTKEMDNADAVLALRSHVKNHSKLRHISKARHIPIHSIKAST 491
Query: 520 LVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVEL 576
+ QIT++LR ++ D GE DLR ++I+ALEEAR+A+EQ+VIPKG+ VEL
Sbjct: 492 IPQITRSLRRMLNMDDSGVGETTDLRLFSHNGSEDEIEALEEARLAVEQIVIPKGQPVEL 551
Query: 577 LPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LPR + IQ +L+ Y L G EP+ RLRI P
Sbjct: 552 LPRSPKVRKIQHELVEHYHLKSTSFGDEPNRRLRIFP 588
>gi|172037264|ref|YP_001803765.1| hypothetical protein cce_2349 [Cyanothece sp. ATCC 51142]
gi|354553853|ref|ZP_08973159.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
gi|171698718|gb|ACB51699.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554570|gb|EHC23960.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
Length = 604
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/572 (45%), Positives = 371/572 (64%), Gaps = 35/572 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP +R ++ +HP L+EVVMDLGR P ARFP L + ++ +++
Sbjct: 34 DLSKLLDILPSSIRNQIKDHPNCDRLVEVVMDLGRLPEARFPGEAIYLGENPVSASDLQY 93
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F+ DNRAGI RTLHRISAIRNR G IIGLTCRVGRAV G+ ++++DLV+ G S
Sbjct: 94 SIQRVGIFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTISMIRDLVETGQS 153
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 154 LLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAT 213
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QHKV+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 214 PELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLMKNP 273
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + + VH + T+D
Sbjct: 274 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVVHEDVAYTID 333
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE---------FFAETSSDEEDEMMVEDAMEVT-- 423
+L PN + R + +G + ++E F T + + ++T
Sbjct: 334 ILLRNGEPNPQTRTVDENGEVQITQEEPDQTPNPASFGRGTGQMIQQPKGWRASGKMTPV 393
Query: 424 ----EERTGKIQFISEF----------PPNIGEDCWEDG-----LLIRLYVYGILEATVV 464
++ K+ SEF P G+ G + +Y YGI + +
Sbjct: 394 SPFGSKKGNKLSSASEFDRLLDASWCQPEPKGDKVRVPGPNGEDFPVYIYPYGIGRSQLE 453
Query: 465 QLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQIT 524
Q+I+ L + + LT ++ AD ++AL S LK S ++ AK+ +PI+ K++++ QIT
Sbjct: 454 QVIEVLNL--PIVLTKDLDSADVVVALRSHLKNQSKLRQVAKARQVPIHGVKSNTIPQIT 511
Query: 525 KALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPS 581
+ L+ L+ + T E DLR + + ++++ALEEAR+A+EQ+V+PKG+ VELLPR
Sbjct: 512 RTLQRLLGMDEAKTPETADLRLFTRGSNDDELEALEEARLAVEQIVLPKGQPVELLPRSP 571
Query: 582 YILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 572 KVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 603
>gi|428768784|ref|YP_007160574.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683063|gb|AFZ52530.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
Length = 582
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/586 (46%), Positives = 378/586 (64%), Gaps = 56/586 (9%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D +LL +LP ++ + HP+ LIE+V+DLGRKP ARF LSD I
Sbjct: 12 ITDDLD----KLLEILPSNIKQPLENHPQKNSLIEIVLDLGRKPEARFSHRTEYLSDQLI 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T I H ++VG+F+ DNRAGI RTLHRISAIRNR+G IIGLTCR+GRAV G+ ++++
Sbjct: 68 TREDITHCVARVGNFSADNRAGIERTLHRISAIRNRQGDIIGLTCRIGRAVFGTILMIKE 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA++ +KRV+I+DTS+EI G+GD+PHP IG A
Sbjct: 128 LVESGQSILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L LIGG+Q+VTLGDEEA RRG QKTVLERK P TF AVE+ + + VH
Sbjct: 248 ENLIKNPTLSDLIGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA----------------------- 404
+ TVD +L G+ P ++R++ +G F+
Sbjct: 308 DVAQTVDYLLRGKQPIPQLRQVNDEGEVSITRDPSFSSPQQVSTNPPTLIDIPNKPTGLR 367
Query: 405 --------------ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLL 450
++ ++ +EM+ ++ E+TG Q + PN GED
Sbjct: 368 AQGKMTPLPIAPHPQSIHNDFEEMLANSWYQL--EKTG--QKMRTPGPN-GED-----FP 417
Query: 451 IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDI 510
I LY YGI ++ + +I L++ + LT ++ ADA+LAL S++K +S + AK +
Sbjct: 418 IYLYPYGIGKSHLDHVISILKL--PIVLTKDLDSADAVLALRSQVKHHSKLVQLAKERQL 475
Query: 511 PIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVV 567
PI + K++S+ I++AL+ L+ D + E D+R ++ ++I+ALEEAR+A+EQ+V
Sbjct: 476 PIKSIKSNSIPHISRALKELVSLEDGNEPESLDIRVLTRVGSDDEIEALEEARLAVEQIV 535
Query: 568 IPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
IP+G+ VELLPR + + +Q +LI Y+L G EP+ RLRI P
Sbjct: 536 IPQGQPVELLPRSAKVRKMQHELIEHYRLRSDSFGDEPNRRLRIYP 581
>gi|428776905|ref|YP_007168692.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
gi|428691184|gb|AFZ44478.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
Length = 599
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/579 (46%), Positives = 375/579 (64%), Gaps = 48/579 (8%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD D LLA LP E+ +++H + ELIEVV+DLGRKP ARF + LS+ +
Sbjct: 35 VTDDLDA----LLATLPPEIASHLTDHEQRGELIEVVIDLGRKPEARFANHWEYLSEATV 90
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T ++ + +VG F+ DNRAGI RTLHRISA+RNR G I+GLTCR+GRAV G+ +++D
Sbjct: 91 TRDDLQFCSDRVGMFSGDNRAGIERTLHRISAMRNRTGEIVGLTCRIGRAVYGTIGMIRD 150
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 151 LVETGRSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPSIGRA 210
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV + E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+A TIA+RG+QLV TAHG +
Sbjct: 211 RRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTELEALATRTIAERGVQLVGTAHGNQL 270
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
+NLI NP+L LIGG+Q VTLGDEEA RRG QKTVLERK TF AVE++ + VH
Sbjct: 271 DNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRWVVHQ 330
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDG---------------SKETVEKEFFAETSS---- 408
+ T+D +L G P E+R G K ++ +
Sbjct: 331 DVSVTIDQLLRGHDPLTEVRSANEQGEVEISSSGGQSQKMNGKSRLQNPILPRPTGWRAS 390
Query: 409 ------------DEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVY 456
+ + E M++ + + EE T K++ PN GED W + +Y Y
Sbjct: 391 GQMTPVEPSPPRNPDFEQMLDQSWQQAEEHTEKVRTPG---PN-GED-WP----VYVYPY 441
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
GI + Q+++ ++ V LT +I ADA++AL S++K +S ++ AK+ ++PI+ K
Sbjct: 442 GISRNLLDQVLELSKL--PVVLTKDIDSADAVIALRSQVKHHSKLRQLAKTKEVPIHIVK 499
Query: 517 TSSLVQITKALRAL--IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
+++L QI++ L+ L +D T E DLR + + ++++ALEEAR+A+EQ+VIPKG+ V
Sbjct: 500 SNTLPQISRTLQRLLDLDPTTPEGMDLRMFTESSNQDELEALEEARLAVEQIVIPKGQPV 559
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPRP+ + +Q +L Y+L G+EP+ RLRI P
Sbjct: 560 ELLPRPAKVRKMQHELAEHYRLQSNSFGEEPNRRLRIYP 598
>gi|17229801|ref|NP_486349.1| hypothetical protein alr2309 [Nostoc sp. PCC 7120]
gi|17131401|dbj|BAB74008.1| alr2309 [Nostoc sp. PCC 7120]
Length = 579
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/576 (47%), Positives = 375/576 (65%), Gaps = 40/576 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQILENHPKRDSLVEVVLDLGRRPEARFPNQAEYLSETPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRIS IRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CVQRVGNFGGDNRAGIEQTLHRISGIRNRSGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKE----------------TVEKEFFAETSSD---EEDEMM 415
+L GR P+ + R + G T E+ F S+ +M+
Sbjct: 306 TLLRGRQPSPQTRTVDEQGKVAITRQLSVVNGRGGQLATPEESFAPARPSNGWRASGQML 365
Query: 416 VEDAMEVTEER-TGKIQFIS------EFPPNI--GEDCWEDG-----LLIRLYVYGILEA 461
++ + ER +G+ +F +P I G + G L + +Y YG+
Sbjct: 366 AIPSLPLERERISGQSEFDRLLDESFNYPEAIDFGSSARQPGPNGEDLPLHVYPYGVSRH 425
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
+ Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S++
Sbjct: 426 QLEQVISVLTL--PVVLTKDIDNADAILALRSHVKNHAKLRQMAKARHVPIHVIKSSTIP 483
Query: 522 QITKALRALIDDHTGEFKDLRSEDKINL----SEKIDALEEARVAIEQVVIPKGESVELL 577
QIT+ LR L++ E D R E ++ L +++DALEEAR+A+EQ+VIPKG+ VELL
Sbjct: 484 QITRGLRRLLNMEDPEVADDR-ELQLFLHNGSDDEMDALEEARLAVEQIVIPKGQPVELL 542
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 543 PRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 578
>gi|428774384|ref|YP_007166172.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428688663|gb|AFZ48523.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
Length = 580
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/576 (46%), Positives = 377/576 (65%), Gaps = 38/576 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D +LL +LP ++ ++ HP+ LIE+V+DLGRKP ARF LS+ +
Sbjct: 12 ITDDLD----KLLHILPLNIQNAIASHPDKKSLIEIVLDLGRKPEARFVDQTCYLSEEVV 67
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ +EH T++VG F+ DNRAGI TLHRISAIRNR+ IIGLTCR+GRAV G+ ++++
Sbjct: 68 SREDLEHCTARVGHFSADNRAGIEGTLHRISAIRNRQEKIIGLTCRIGRAVFGTILMIRE 127
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ G S+L +G PGVGKTT +REIARVLA++ +KRV+I+DTS+EI G+GDIPHP IG A
Sbjct: 128 LVESGQSILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDIPHPAIGRA 187
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG +
Sbjct: 188 RRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHL 247
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L LIGG+Q+VTLGD+EA RRG QKTVLERK P TF AVE+ + + VH
Sbjct: 248 ENLIKNPTLSDLIGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHE 307
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ TVD IL GR ++R++ +G K ++ ++ S++ E E M + +
Sbjct: 308 EVAQTVDNILRGRQIIPQLRQVDDEG-KVSITRDPNLAPSNERLPEPQWETMMNAPVKPS 366
Query: 428 G------KIQFISEFPPNIG-----EDCW----------------EDGLLIRLYVYGILE 460
G I E P + ++ W ED + +Y YG+
Sbjct: 367 GLRASGKMIPLQPESSPQMEFNQLLDNSWYQADEVNKIRTPGPNGED-WPVYVYPYGVGR 425
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
+ + Q+I L++ + T ++ ADA+LAL S++K + + AK+ +PIY+ K++S+
Sbjct: 426 SQLEQVINVLKL--PITFTKDLDSADAVLALRSQVKHHGKLMQLAKNRQVPIYSIKSNSI 483
Query: 521 VQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELL 577
QIT+ALR L+ + T E DLR K ++I+ALEEAR+A+EQ+VIP+G+ VELL
Sbjct: 484 PQITRALRKLVNMDNPDTPESADLRLFTKAGSDDEIEALEEARLAVEQIVIPQGQPVELL 543
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PR + + +Q +LI Y+L G EP+ RLRI P
Sbjct: 544 PRNAKVRKMQHELIEHYRLRSDSFGNEPNRRLRIYP 579
>gi|427719465|ref|YP_007067459.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
gi|427351901|gb|AFY34625.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
Length = 578
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/580 (47%), Positives = 374/580 (64%), Gaps = 49/580 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+ +R + HP+ L+EVV+DLGR+P ARFP LS+ +T I+
Sbjct: 6 DLQKLLDILPQGLRQVLENHPKRDILVEVVLDLGRRPEARFPHQAEYLSETPVTQEQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIERVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PDQQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEF-----------FAETSSD---------EEDEM 414
+L GR PN + R + +G K +V ++ FAE +S +M
Sbjct: 306 NLLRGRQPNPQTRTVDDEG-KVSVARQLAVVNGRGPHSIFAEDASPPMRPSNGWRSSGQM 364
Query: 415 MVEDAMEVTEER-TGKIQF-----------------ISEFPPNIGEDCWEDGLLIRLYVY 456
+ + ER TG+ +F + P GED L + +Y Y
Sbjct: 365 VALPPFSLERERVTGRSEFDRLLDESFNYSEAVDFDATRQPGPNGED-----LPLHIYPY 419
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
G+ + Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K
Sbjct: 420 GVSRHQLEQVISVLTL--PVILTKDIDSADAILALRSHVKNHAKLRQMAKARHVPIHVIK 477
Query: 517 TSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGES 573
+S++ QIT+ LR L+ D G+ ++L+ ++IDALEEAR+A+EQ+VIPKG+
Sbjct: 478 SSTIPQITRGLRRLLNMDDPELGDDRELQLLLHSGSEDEIDALEEARLAVEQIVIPKGQP 537
Query: 574 VELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR S + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 538 VELLPRSSQVRKMQHELVEHYRLKSDSFGEEPNRRLRIYP 577
>gi|354567011|ref|ZP_08986181.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
gi|353543312|gb|EHC12770.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
Length = 577
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/580 (46%), Positives = 373/580 (64%), Gaps = 50/580 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + +HP+ L+EVV+DLGR+P ARFP LS+ +T + I+
Sbjct: 6 DLQKLLYILPQDLRQILEKHPQRDSLVEVVLDLGRRPEARFPDQAEYLSEIPVTQNVIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+PHP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTALEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVSDTVD 305
Query: 375 AILSGRIPNVEIRRMQH-------------DGSKETVEKE--FFAETSSDEEDEMMVEDA 419
++L G P+ ++R + +G +T+ KE F S+
Sbjct: 306 SLLRGHQPSPQVRTVDESGKVKITRQLTPLNGRSQTLAKEESFLPARQSNGWRASGQMQP 365
Query: 420 MEVTEERTGKIQFISEFP----------------------PNIGEDCWEDGLLIRLYVYG 457
+ K+ +EF PN GED L + +Y YG
Sbjct: 366 LPPLTTEPPKLSRQNEFDRLLDESFNYFGDFDEADSKLAGPN-GED-----LPLHIYPYG 419
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + Q+++ L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+
Sbjct: 420 VSRGQLEQVVEVLNL--PVVLTKDIDSADAILALRSHVKNHAKLRQIAKARQVPIHMIKS 477
Query: 518 SSLVQITKALRALIDDHTGEFKDLRSEDKINL----SEKIDALEEARVAIEQVVIPKGES 573
S++ QIT+ LR L++ E D R E ++ L ++IDALEEAR+A+E +VIPKG+
Sbjct: 478 STIPQITRGLRRLLNIDDPEVTDDR-ELQLFLHSASDDEIDALEEARLAVENIVIPKGQP 536
Query: 574 VELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 537 VELLPRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 576
>gi|359461140|ref|ZP_09249703.1| hypothetical protein ACCM5_20609 [Acaryochloris sp. CCMEE 5410]
Length = 577
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/579 (46%), Positives = 372/579 (64%), Gaps = 45/579 (7%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
N L +LL +LPE +R + HP+ +IEVVMDLGR+P ARFP LS I+
Sbjct: 9 NQQITDNLEQLLDILPETLRSHLQHHPQRSVMIEVVMDLGRQPEARFPGQAEYLSTEPIS 68
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
+++ +V F+ DNRAGI RTLHRISA+RNR+G IIGLTCRVGRAV G+ +++DL
Sbjct: 69 RDDLDYCIQRVSHFSGDNRAGIERTLHRISAMRNRQGEIIGLTCRVGRAVLGTTEIIRDL 128
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
V+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG AR
Sbjct: 129 VESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRAR 188
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQV E+QH+V+IEAVENH P+VIVIDEIGT+LEA AA TIA+RG+QL+ TAHG IE
Sbjct: 189 RMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNRIE 248
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NL+ NP+L L+GG+Q+VTLGD+EA RRG QK+VLERK P TF AVE++ ++ VH
Sbjct: 249 NLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRWIVHEE 308
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEF-------------------------- 402
+ T+D +L GR+PN ++R + G K T+ E
Sbjct: 309 VANTIDNLLRGRMPNPQVRTVSESG-KVTITHELSTSPIVEPTPIESAPSGWRSSGRMKP 367
Query: 403 ----FAETSSD-EEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYG 457
A +D E + +++ +++ ++ + F + PN GED L + +Y Y
Sbjct: 368 VPNPVAPAKTDFNEFQTLLDASLQQQDQYGNTLHFAAG--PN-GED-----LPLHVYPYA 419
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + + Q+I L + + LT ++ AD + AL S LK +S ++ AK+ +PI+ K+
Sbjct: 420 VSRSQLDQVITTLNL--PIVLTKDMDHADVIFALRSHLKHHSKLRNLAKTRQVPIHTVKS 477
Query: 518 SSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
S++ QI + LR L+ D T E DL+ N ++I+ALEEAR+A+EQ+VIPK + V
Sbjct: 478 STIPQIARGLRRLVNMDDPGTPELVDLKLFSGSNDDDEIEALEEARLAVEQIVIPKKQPV 537
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR + I +Q +LI Y+L + G++P+ RLRI P
Sbjct: 538 ELLPRSASIRKMQHELIEHYRLQSRSFGEDPNRRLRIYP 576
>gi|86610056|ref|YP_478818.1| R3H domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558598|gb|ABD03555.1| R3H domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 639
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/619 (43%), Positives = 380/619 (61%), Gaps = 72/619 (11%)
Query: 63 RVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPS-GDFS 121
R + + +L +LL +LP +R R+ +HP L L+EVV+DLGR+P ARFP D+
Sbjct: 24 RTGFPGQVQYSDDLSKLLDILPAPIRERLEQHPHLDRLVEVVLDLGRRPEARFPGFADYL 83
Query: 122 LSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
L D IT ++ S+VG+F+ DNRAGI+ TLHRISAIRNR+G IIGLTCRVGR V G
Sbjct: 84 LEDV-ITRADLDQVISRVGEFSSDNRAGIASTLHRISAIRNRQGTIIGLTCRVGRCVIGV 142
Query: 182 ANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPH 241
++++DLV+ G S+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+PH
Sbjct: 143 ISMIRDLVEQGRSMLLLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDVPH 202
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
PGIG ARRMQV + E+QHKV+IEAVENHMP+V+VIDEIGT+LEA+A+ TIA+RG+QLVAT
Sbjct: 203 PGIGRARRMQVASPELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVAT 262
Query: 302 AHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKT 361
AHG I+NLI NP+L L+GG+Q+VTLGDEEA RRG QK+VLERK P TF A+E++ ++
Sbjct: 263 AHGNRIDNLIKNPTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAIEMLERS 322
Query: 362 ELRVHHSLEATVDAILSGRIPNVEIRRM-------------------------------- 389
+H + ATVD +L R P + R +
Sbjct: 323 RWVIHEDVAATVDRLLRNREPLTQTRSLDEHGQVVIVRSTAGANGRPALSGPQWPPAGST 382
Query: 390 ----------QHDGSKETVEKEFFAETSSDEEDEMMV----EDAMEVTEERT-GKIQFIS 434
Q G E + E S + + ++ ED++ +T + Q ++
Sbjct: 383 ISAARERGGWQRSGRMEALPSEPLESRSQQQGESGLLLERREDSVPLTPAGSRPAAQVVA 442
Query: 435 EFPPNIGED-----CWE-------------DGLLIRLYVYGILEATVVQLIKQLQMDDAV 476
E G D WE DG L+ +Y YG+ + Q+I+ L++ +
Sbjct: 443 ESKAEFGSDEEEDLDWEGSALAPTGRQQNPDGPLM-IYPYGVSRFYLEQVIQTLKL--SA 499
Query: 477 QLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL--IDDH 534
+T ++ EAD +LAL S+++ S IQ A S IPI+ K ++L+ + +ALR + I+
Sbjct: 500 DVTKDLDEADIVLALRSQVRSRSKIQQMAHSRQIPIHTVKANTLIALARALRHILNIESE 559
Query: 535 TGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKY 594
G DL + + ++ +ALEEAR+A+EQ+VIPK + VELLPR I +Q L+ Y
Sbjct: 560 EGSDSDLELFIRASSGDETEALEEARLAVEQIVIPKSQPVELLPRSPLIRKLQHQLVEHY 619
Query: 595 QLHYQRVGKEPDARLRILP 613
L Q G+EP+ RLRI P
Sbjct: 620 HLRAQSFGEEPNRRLRIYP 638
>gi|158334816|ref|YP_001515988.1| hypothetical protein AM1_1653 [Acaryochloris marina MBIC11017]
gi|158305057|gb|ABW26674.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 577
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/579 (46%), Positives = 372/579 (64%), Gaps = 45/579 (7%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
N L +LL +LPE +R + HP+ +IEVVMDLGR+P ARFP LS I+
Sbjct: 9 NQQITDNLEQLLDILPETLRSHLQHHPQRSVMIEVVMDLGRQPEARFPGQAEYLSTEPIS 68
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
+++ +V F+ DNRAGI RTLHRISA+RNR+G IIGLTCRVGRAV G+ +++DL
Sbjct: 69 RDDLDYCIQRVSHFSGDNRAGIERTLHRISAMRNRQGEIIGLTCRVGRAVLGTTEIIRDL 128
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
V+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPHP IG AR
Sbjct: 129 VESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRAR 188
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQV E+QH+V+IEAVENH P+VIVIDEIGT+LEA AA TIA+RG+QL+ TAHG IE
Sbjct: 189 RMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNRIE 248
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NL+ NP+L L+GG+Q+VTLGD+EA RRG QK+VLERK P TF AVE++ ++ VH
Sbjct: 249 NLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRWIVHEE 308
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEF-------------------------- 402
+ T+D +L GR+PN ++R + G K T+ E
Sbjct: 309 VANTIDNLLRGRMPNPQVRTVSESG-KVTITHELSTTPIPEPTPIESAPSGWRSSGRMKP 367
Query: 403 ----FAETSSD-EEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYG 457
A +D E + +++ +++ ++ + F + PN GED L + +Y Y
Sbjct: 368 VPNQVAPAKTDFNEFQTLLDASLQQQDQYGNTLHFAAG--PN-GED-----LPLHVYPYA 419
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + + Q+I L + + LT ++ AD + AL S LK +S ++ AK+ +PI+ K+
Sbjct: 420 VSRSQLDQVITTLNL--PIVLTKDMDHADVIFALRSHLKHHSKLRNLAKTRHVPIHTVKS 477
Query: 518 SSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
S++ QI + LR L+ D T E DL+ N ++I+ALEEAR+A+EQ+VIPK + V
Sbjct: 478 STIPQIARGLRRLVNMDDPGTPELVDLKLFSGSNDDDEIEALEEARLAVEQIVIPKKQPV 537
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR + I +Q +LI Y+L + G++P+ RLRI P
Sbjct: 538 ELLPRSASIRKMQHELIEHYRLQSRSFGEDPNRRLRIYP 576
>gi|428213099|ref|YP_007086243.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
gi|428001480|gb|AFY82323.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
Length = 615
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 372/583 (63%), Gaps = 47/583 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LPE +R ++ H L LIEVVMDLGR P ARFP+ +SD +T +++
Sbjct: 35 DLSQLLEILPETIREHLTNHSSLSNLIEVVMDLGRLPEARFPNKAEYISDIPVTRSDLKY 94
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A +VG F+ DNRAGI +TLHRISAIRNR G IIGLTCRVGR+V G+ ++++DLV+ G S
Sbjct: 95 AIERVGHFSGDNRAGIEQTLHRISAIRNRTGEIIGLTCRVGRSVFGTIHMIRDLVESGQS 154
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 155 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAA 214
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QHKV+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 215 PEFQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 274
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q+VTLGDEEA RRG QKTVLERK P TF AVE+ + VH + TVD
Sbjct: 275 TLCDLVGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMSERKRWVVHERVAETVD 334
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
++L GR P++++R + G K T+ KE + S+ + V +GK+Q +
Sbjct: 335 SLLRGRQPDLQVRTVSESG-KVTITKELQPQNSTTTKTTAAVRPFGSAGLRASGKMQPLP 393
Query: 435 -EFPPNIG--------EDCWE--------------------------------DGLLIRL 453
+ P +G E +E + L + +
Sbjct: 394 VQTLPELGRRSQAVPEEKSFEQMLNESLYPGDRFASAADYGFEEISPLAGPNGEDLPLHV 453
Query: 454 YVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIY 513
Y YG+ + Q+I+ L + V +T +I AD +LA+ S +K +S ++ +K+ +PI+
Sbjct: 454 YPYGVSRHQLDQVIRTLAL--PVVVTKDIDSADVVLAVRSHVKNHSKLRQMSKNRQVPIF 511
Query: 514 ATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPK 570
+SS+ +I +LR ++ + T E D+ + ++I+ALEEAR+A+EQ+VIPK
Sbjct: 512 TINSSSVPKIAHSLRRMLHLDEGSTPEISDVSLFAQSGSDDEIEALEEARLAVEQIVIPK 571
Query: 571 GESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
G+ VELLPR + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 572 GQPVELLPRGGQVRKMQHELVEHYRLKSCSFGDEPNRRLRIYP 614
>gi|414079590|ref|YP_007001014.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
gi|413972869|gb|AFW96957.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
Length = 583
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/585 (46%), Positives = 372/585 (63%), Gaps = 54/585 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP++++ ++ HP L+EVV+DLGR+P ARFP LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLQQKLEHHPNGDNLVEVVLDLGRRPEARFPHVAEYLSETPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGNFGGDNRAGIEQTLHRISAIRNRSGKIIGLTCRVGRAVFGTIAMIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GD+ HP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVSK 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH + TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHECVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSK----------------------ETVEKEFFAETSSD--E 410
+L GR P + R + +G VE+ F + +
Sbjct: 306 TLLRGRQPTPQTRTVDDNGKVGVVRQLAVVNGGNSNGNGNGHIANVEESFLSAQPNGWRS 365
Query: 411 EDEMMVEDAMEVTEER-TGKIQF------------------ISEFPPNIGEDCWEDGLLI 451
+M+ + + ER TG+ +F + PN GED L +
Sbjct: 366 SGQMVALPPLSLDRERPTGRSEFDRLLDESFNYSESFDFASRKQAGPN-GED-----LPL 419
Query: 452 RLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIP 511
+Y YG+ + Q+I L + V LT ++ ADA+LAL S +K ++ ++ AK+ +P
Sbjct: 420 HIYPYGVSRQQLEQVINVLTL--PVILTKDLDSADAILALRSHVKNHAKLRQMAKARHVP 477
Query: 512 IYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVI 568
I+ K+S++ QIT++LR L+ D G+ ++L+ +++DALEEAR+A+EQ+VI
Sbjct: 478 IHVIKSSTIPQITRSLRRLLNIDDPDIGDDRELQLLLHNGGDDEMDALEEARLAVEQIVI 537
Query: 569 PKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PKG+ VELLPR S + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 538 PKGQPVELLPRSSQVRKMQHELVEHYRLKSDSFGDEPNRRLRIYP 582
>gi|434403513|ref|YP_007146398.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
gi|428257768|gb|AFZ23718.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
Length = 578
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/575 (46%), Positives = 374/575 (65%), Gaps = 39/575 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRHVLENHPKRDILVEVVLDLGRRPEARFPQQAEYLSETPVTQEQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PDQQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLCDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFF------AETSSDEED--------------EM 414
+L GR P+ + R + G K + ++ + + EE +M
Sbjct: 306 NLLRGRQPSPQTRTVDEQG-KVAITRQLAVVNGRGGQLAGGEESFPPVRQPNGWRSSGQM 364
Query: 415 MVEDAMEVTEER-TGKIQF----------ISEFPPNIGEDCWEDG--LLIRLYVYGILEA 461
+ A+ + ER TG+ +F F + + +G L + +Y YG+
Sbjct: 365 VALPALPLERERVTGRSEFDRLLDESFNHSDSFDYHASKHAGPNGEDLPLHIYPYGVSRH 424
Query: 462 TVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLV 521
+ Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S++
Sbjct: 425 QLEQVINVLTL--PVALTKDIDSADAILALRSHIKNHAKLRQMAKARQVPIHVIKSSTIP 482
Query: 522 QITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLP 578
QIT+ LR L+ D T + ++L+ +++DALEEAR+A+EQ+VIPKG+ VELLP
Sbjct: 483 QITRGLRRLLNMDDPETADDRELQLFLHSGSDDEMDALEEARLAVEQIVIPKGQPVELLP 542
Query: 579 RPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
R S + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 543 RSSQVRKMQHELVEHYRLKSDSFGEEPNRRLRIYP 577
>gi|416393486|ref|ZP_11686016.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
gi|357263482|gb|EHJ12485.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
Length = 576
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/581 (45%), Positives = 369/581 (63%), Gaps = 53/581 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP + + EHP L+EVVMDLGR P ARFP L D ++ +E+
Sbjct: 6 DLSQLLDILPSSISHCLKEHPNCDRLVEVVMDLGRVPEARFPGESIYLGDVPVSAADLEY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F+ DNRAGI RTLHRISA+RNR G IIGLTCRVGRAV G+ ++++DLV+ G S
Sbjct: 66 SIQRVGIFSGDNRAGIERTLHRISAMRNRGGDIIGLTCRVGRAVFGTISMIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 LLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAT 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QHK++IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 186 PELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLLKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + + +H + T+D
Sbjct: 246 TLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVIHEDVANTID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--------------------------------- 401
+L PN ++R + G + ++E
Sbjct: 306 ILLRSGHPNPQVRTVDEKGEVQITQEEPDITPNPASFGRNSGGIVQQPKGWRASGKMTPV 365
Query: 402 -FFA-----ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYV 455
FA SS E + +++ + E + KI+ PN GED + +Y
Sbjct: 366 TPFAGKRGSNLSSASEFDRLLDASWTQPEPKGDKIRVPG---PN-GED-----FPVYIYP 416
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YGI + + Q+I+ L + + LT ++ AD ++AL S LK S ++ AK +PI+
Sbjct: 417 YGIGRSQLEQVIEVLNL--PIVLTKDLDNADVVVALRSHLKNQSKLRQVAKMRQVPIHGV 474
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K++++ QIT+ L+ L+ + T E DLR + ++++ALEEAR+A+EQ+V+PKG+
Sbjct: 475 KSNTIPQITRTLQRLLGMDEAKTPETADLRLFTRGGNDDELEALEEARLAVEQIVLPKGQ 534
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 535 PVELLPRSPKVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 575
>gi|427705776|ref|YP_007048153.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
gi|427358281|gb|AFY41003.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
Length = 578
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/581 (46%), Positives = 375/581 (64%), Gaps = 51/581 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLRQVLENHPQRDNLVEVVLDLGRRPEARFPNQAEYLSEIPVTQAQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRA+ G+ ++++DLV+ G S
Sbjct: 66 CIQRVGTFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAIFGTISMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGS-----KETVEKEFFAETSSDEE--------------DEMM 415
+L GR P+ + R + +G + +V + +S EE +M+
Sbjct: 306 TLLRGRQPSPQTRTVDDNGKVAMTRQLSVVNGRGGQLASGEETFSSGRQPTGWRASGQMV 365
Query: 416 VEDAMEVTEERT-GKIQF------------------ISEFPPNIGEDCWEDGLLIRLYVY 456
+ V E+ G+ +F PN GED L + +Y Y
Sbjct: 366 ALPPLTVEREKAIGQSEFDRLLEESFNYSDSIDFALTKNAGPN-GED-----LPLHVYPY 419
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
G+ + Q+I L + V LT +I AD++LAL S +K ++ ++ AK+ +PI+ K
Sbjct: 420 GVSRHQLEQVISVLTL--PVVLTKDIDSADSILALRSHVKNHAKLRQVAKARHLPIHMIK 477
Query: 517 TSSLVQITKALRALIDDHTGEFKDLRSEDKINL----SEKIDALEEARVAIEQVVIPKGE 572
S++ QIT+ LR L++ E D R E ++ L ++IDALEEAR+A+EQ+VIPKG+
Sbjct: 478 ASTIPQITRGLRRLLNMDEPEIADDR-ELQLFLHSGSDDEIDALEEARLAVEQIVIPKGQ 536
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 537 PVELLPRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 577
>gi|443327493|ref|ZP_21056117.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
gi|442792922|gb|ELS02385.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
Length = 584
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/578 (46%), Positives = 370/578 (64%), Gaps = 51/578 (8%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L LL + P +R ++ HP+ LIEVVMDLGR P ARF + L + I+ ++++
Sbjct: 17 LDELLGIFPTVIRDKIEAHPQKDNLIEVVMDLGRLPEARFRNEVCYLGEKPISKEDLQYS 76
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
+VG F DNRAGI RTLHRISA+RNR G IIGLTCR+GRAV G+ +++DL++ G S+
Sbjct: 77 IERVGIFGGDNRAGIERTLHRISAMRNRAGDIIGLTCRIGRAVFGTIVMIRDLIETGGSI 136
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 137 LLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARP 196
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENLI NP+
Sbjct: 197 ELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNALENLIKNPT 256
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L L+GG+Q VTLGD+EA RRG QKTVLERK P TF+ AVE++ + + VH T+D+
Sbjct: 257 LSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAIAVEMLERQKWIVHEDTAQTIDS 316
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKEFFAETSS--------------------------- 408
+L G P +IR + G VE+E +
Sbjct: 317 LLRGIEPGSQIRTVDDSGEVSIVEQEAVSHIKGVQSRNSNIVAPLSPRGWRASGKMTPIA 376
Query: 409 ----------DEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGI 458
+ E EMM+E + + + KI+ PN GED W + +Y YGI
Sbjct: 377 PLSRKKKNKINPEFEMMLEGSWQTQDPSGSKIRTPG---PN-GED-WP----VYIYPYGI 427
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ + ++I L D V LT ++ ADA++AL S++K +S ++ AK+ +I I+A K++
Sbjct: 428 GRSQIERVIDVL--DLPVVLTKDVDHADAVVALRSQIKHHSRLRQLAKTRNIAIHAVKSN 485
Query: 519 SLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
++ QIT+ LR L+ D + D+R + ++I+ALEEAR+A+EQ+VIP+G+ VE
Sbjct: 486 TIPQITRTLRQLLQLEDPNATNTADVRLFTTASNDDEIEALEEARLAVEQIVIPQGQPVE 545
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR S I +Q +L+ Y L G+EP+ RLRI P
Sbjct: 546 LLPRSSKIRKMQHELVEHYHLESNSFGEEPNRRLRIYP 583
>gi|409992005|ref|ZP_11275221.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
gi|291568683|dbj|BAI90955.1| Ycf45 protein [Arthrospira platensis NIES-39]
gi|409937126|gb|EKN78574.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
Length = 592
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 273/589 (46%), Positives = 370/589 (62%), Gaps = 53/589 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++P +R + HPE LIE+VMDLGR P ARFPS LS +T + H
Sbjct: 6 DLNRLLDIVPPTVRKNLINHPERECLIEIVMDLGRLPEARFPSNAEYLSQQPVTWDDLSH 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
S++G+F+ DNRAGI +TLHRISAIRNR G +IGLTCRVGRAV G +++DLV+ G S
Sbjct: 66 CISRIGEFSGDNRAGIEKTLHRISAIRNRTGKVIGLTCRVGRAVFGKIGMIRDLVETGGS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TI++RG+QL+ TAHG IENL+ NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAHGNRIENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + VH S+ TVD
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERWVVHESVSTTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFF----------AETSSDEEDEMMVEDAMEV-- 422
+L G P +++R+M +D + TV +E + A +S+ + A +
Sbjct: 306 GLLRGMQPTLQVRQM-NDRGEVTVTQERYSTPAARNAVPAGSSTGSSRPLPPLSAPGLGG 364
Query: 423 -------------TEERTGKI----QFISEF---------PPNIGEDCWED--------- 447
T R+G + EF P G+D D
Sbjct: 365 LRASGKMMPLPTSTTVRSGSVPENQPATQEFEQLLNASFESPGFGDDNSLDLGDNGFNED 424
Query: 448 GLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKS 507
L + +Y Y I + Q+I+ L + V +T +I AD +LAL S ++ S ++ AK+
Sbjct: 425 DLPLHIYPYAIARYQIEQVIRTLML--PVVVTKDIDGADVVLALRSHIRNQSKLRQMAKN 482
Query: 508 HDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIE 564
IPI+ K+ S QI KAL L+ D T E DL N S++++ALEEAR+A+E
Sbjct: 483 RHIPIHTVKSGSPPQIAKALHRLLHRSDPSTPEVPDLSLFASGNSSDELEALEEARLAVE 542
Query: 565 QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
++VIPKG+ VELLPR + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 543 EIVIPKGQPVELLPRSPKVRKMQHELVEHYRLKSNSFGEEPNRRIRIYP 591
>gi|434386487|ref|YP_007097098.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
gi|428017477|gb|AFY93571.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
Length = 588
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/580 (46%), Positives = 361/580 (62%), Gaps = 48/580 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LLA+LPE +RI + HP+L LIEVVMDLGR P ARF G LSD +T I+H
Sbjct: 15 DLSQLLAVLPESIRIALENHPKLSVLIEVVMDLGRYPEARFADGAEYLSDVAVTRADIQH 74
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F+ DNRAGI RTLHRIS +RNR IIGLTCRVGRAV G+ N+++DLV+ G S
Sbjct: 75 CVDRLGLFSGDNRAGIERTLHRISCMRNRTDEIIGLTCRVGRAVYGTINMIRDLVETGKS 134
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPH IG ARRMQV
Sbjct: 135 ILMLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVAR 194
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENL+ NP
Sbjct: 195 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLLKNP 254
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGDEEA RR QKTVLERK P TF AVE+ + VH S+ VD
Sbjct: 255 TLSDLIGGIQAVTLGDEEARRRSSQKTVLERKAPPTFEIAVEMHERHRWVVHDSVSEMVD 314
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L GR P ++R + G V E ++ +M + T +S
Sbjct: 315 TLLRGRQPTTQVRTVNEAGKVSIVR-----ELPEPAKNGLMPAPNIPATNGGWRSSGRMS 369
Query: 435 EFPPNIGEDC------------------WE--------------------DGLLIRLYVY 456
P + + W+ + L + +Y Y
Sbjct: 370 PMPSTLATNASQTTLEADLGFSQLLDQNWDSDEAMMSAGMATGITVGANGEELPLHVYPY 429
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
GI + Q+I+ L + V LT ++ ADA+LAL + +K ++ ++ +K +PIY+ K
Sbjct: 430 GIGRDELEQVIEVLNL--PVVLTKDMGSADAVLALRTHIKNHAKLRQISKVRQVPIYSVK 487
Query: 517 TSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGES 573
+ ++ QIT+ LR ++ D E DLR + ++++ALEEAR+A+EQ+VIPKG+
Sbjct: 488 SGTIPQITRTLRRMLHMDDPGIPEEADLRLFTQNASEDEVEALEEARLAVEQIVIPKGQP 547
Query: 574 VELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + + +Q +L+ Y L G+EP+ RLRI P
Sbjct: 548 VELLPRSNAVRKMQHELVEHYHLKSTSFGEEPNRRLRIFP 587
>gi|282900213|ref|ZP_06308167.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
gi|281194888|gb|EFA69831.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
Length = 575
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 271/578 (46%), Positives = 369/578 (63%), Gaps = 47/578 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++ ++ +HP+ L+EVV+DLGR P ARFP LS +T I+
Sbjct: 5 DLQKLLEILPQDLEKQLQDHPQRDNLVEVVLDLGRLPEARFPGTAEYLSQSPVTQSQIDD 64
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRA+ G+ +++DLV+ G S
Sbjct: 65 CIQRVGNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAIFGTIGMIRDLVETGKS 124
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDI HP IG ARRMQV
Sbjct: 125 ILMLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVAR 184
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+A+ TIA+RG+QLV TAHG IENLI NP
Sbjct: 185 PELQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAHGNQIENLIKNP 244
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RR QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 245 TLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERWVVHESVADTVD 304
Query: 375 AILSGRIPNVEIRRMQHDGSKE-----TVEKEFFAETSSDEED-------------EMMV 416
A+L GR PN + R + G T+ + + +S+EE M+
Sbjct: 305 ALLRGRQPNPQTRTVDEQGKVSIARPLTLVNGYGSGLASEEESLPIKQVNGWRASGHMVA 364
Query: 417 EDAMEVTEERTGKIQF------------------ISEFPPNIGEDCWEDGLLIRLYVYGI 458
+ ER +F I PN GED L + +Y YG+
Sbjct: 365 LPPLSPERERGTSSEFDRLLDESFHQGDSFNLGKIRSAGPN-GED-----LPLHVYPYGV 418
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ +I+ L++ V LT +I ADA+LAL S +K ++ AKS +PI+ K+S
Sbjct: 419 SRHQLEHVIEVLKL--PVALTKDIDGADAILALRSHVKNQVKLRQLAKSRHLPIHVIKSS 476
Query: 519 SLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
++ QI++ LR L+ D GE +L+ ++IDALEEAR+A+EQ+VIPKG+ VE
Sbjct: 477 AIPQISRGLRRLLNMDDLDLGEDCELQLLLHEGSDDEIDALEEARLAVEQIVIPKGQPVE 536
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR +++ +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 537 LLPRSAHVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 574
>gi|434391656|ref|YP_007126603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
gi|428263497|gb|AFZ29443.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
Length = 582
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 274/579 (47%), Positives = 370/579 (63%), Gaps = 43/579 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP E+R + HP L+EVVMDLGR P ARFP+ LSD I+ +
Sbjct: 6 DLQKLLDILPLEIRQALEYHPLRDSLVEVVMDLGRLPEARFPNQAEYLSDTPISQEQLNE 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGEFGGDNRAGIEKTLHRISAIRNRTGKIIGLTCRVGRAVYGTIGMIRDLVETGRS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+ HP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEAMAA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RR QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--FFAETSSDEEDEM------------MVEDAM 420
++L G P+ ++R + D K TV ++ +DE+ ++ M +
Sbjct: 306 SLLRGHQPSPQVRTVD-DAGKVTVTRQQPVTIRGITDEKQDIRTASLNTSQPPTMQSNGW 364
Query: 421 EVT--------EERTGKIQFISEF---------PPN-IGEDCWEDG-----LLIRLYVYG 457
+ + R I +SEF PP+ G G L + +Y YG
Sbjct: 365 RASGQMLPLPRQSREQDISGVSEFERLLDQSLDPPDRFGYGAQTAGPNGEDLPLHIYPYG 424
Query: 458 ILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKT 517
+ + Q+I+ L + V LT +I ADA+LAL S +K +S ++ AK +PI+ K
Sbjct: 425 VSRHQLEQVIQVLNL--PVVLTKDIDSADAILALRSHVKNHSKLRHIAKVRQVPIHMIKA 482
Query: 518 SSLVQITKALRALID---DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESV 574
S++ QIT+ LR ++D T + ++L + ++IDALEEAR+A+EQ+VIPKG+ V
Sbjct: 483 STIPQITRTLRRMLDMDEPLTTDERELSLFTQGGSEDEIDALEEARLAVEQIVIPKGQPV 542
Query: 575 ELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 543 ELLPRSPKVRKMQHELVEHYRLKSNSFGEEPNRRLRIYP 581
>gi|443316490|ref|ZP_21045932.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
gi|442783923|gb|ELR93821.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
Length = 575
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/586 (45%), Positives = 371/586 (63%), Gaps = 64/586 (10%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
+LLA+LP +R ++ HP +LIEVV+DLGR+P ARFP+G L + ++ ++H
Sbjct: 3 QLLAILPNLLRSQLEVHPHRDQLIEVVLDLGRRPEARFPNGAEYLGESVVSQETLQHCIE 62
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DL++ G S+L
Sbjct: 63 RVGYFGGDNRAGIEQTLHRISAIRNRSGDIIGLTCRVGRAVFGTIGMIRDLIETGGSILM 122
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV E+
Sbjct: 123 LGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQPEL 182
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QLV TAHG +ENLI NP+L
Sbjct: 183 QHQVMIEAVENHMPEVIVIDEIGTELEATAARTIAERGVQLVGTAHGNRLENLIKNPTLS 242
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L+GG+Q+VTLGD+EA RRG QK+VLERK P TF AVE++ + +H + TVD +L
Sbjct: 243 DLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQRWVIHEEVANTVDNLL 302
Query: 378 SGRIPNVEIRRMQH-----------DGSKETV--EKEFFAETSSDEEDEM---------- 414
GR P ++R DGS+ T+ E + + M
Sbjct: 303 RGRPPAAQVRETAENGRVTITHELPDGSQPTLVPRAERLSPSGWRAAGRMTPLPPPASLA 362
Query: 415 -------------MVEDAMEVTEERTGKIQFISEFP------PNIGEDCWEDGLLIRLYV 455
++ED + + Q + P PN GED ++R+Y
Sbjct: 363 APALSPEQQTFASLLEDTIGAPPLASSPAQIATLLPEDAPVGPN-GED------ILRIYP 415
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YG+ + Q+I+ LQ+ V LT ++ ADA+LAL S +K + ++ AK+ IPI+
Sbjct: 416 YGLSRHQLDQVIRTLQL--PVLLTKDLEMADAVLALRSHVKNHVKLRHVAKARHIPIHTV 473
Query: 516 KTSSLVQITKALRALIDDHTGEFKDLRSEDKINL--------SEKIDALEEARVAIEQVV 567
K++S+ Q+ ++L+ L+D G + +NL +++++ALEEAR+A+EQ+V
Sbjct: 474 KSNSMPQLVRSLQRLLDLEEGTI-----QPGVNLELFSPKGDADELEALEEARLAVEQIV 528
Query: 568 IPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
IPKG+ VELLPR + I +Q +L Y+L G EP+ RLRI P
Sbjct: 529 IPKGQPVELLPRSARIRKMQHELAEHYRLKSLSFGDEPNRRLRIYP 574
>gi|159475499|ref|XP_001695856.1| hypothetical protein CHLREDRAFT_118675 [Chlamydomonas reinhardtii]
gi|158275416|gb|EDP01193.1| predicted protein [Chlamydomonas reinhardtii]
Length = 551
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 266/565 (47%), Positives = 352/565 (62%), Gaps = 52/565 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +L+ LLP +R + +HP++ EL+EVVMDLGR PLARFP GD LS IT +E
Sbjct: 1 ELMKLVQLLPASVRAALEDHPQMLELLEVVMDLGRPPLARFPGGDVKLSTAAITAEDLEF 60
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A QVG+F DNRAGI RTLHRIS +RNR G IIGLTCRVGRA+ GSA +++DLV GAS
Sbjct: 61 AVRQVGEFGGDNRAGIDRTLHRISCMRNRTGRIIGLTCRVGRAIKGSAQMVRDLVLSGAS 120
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT IRE++R+LA++ KRV+IVDTS+EIGG+GDIPH GIG ARRMQV +
Sbjct: 121 ILLLGRPGVGKTTAIREVSRMLADECTKRVVIVDTSNEIGGDGDIPHSGIGRARRMQVAH 180
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMPQVIVIDEIGT E AA TIAQRG+QLVATAHG +EN+I NP
Sbjct: 181 PEAQHRVMIEAVENHMPQVIVIDEIGTSEECGAARTIAQRGVQLVATAHGNELENVIKNP 240
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L L+GG+Q+VTLGDEEA RRGVQK++LER P TF +E++ +T+ R H + VD
Sbjct: 241 QLADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKWRAHLDVGQAVD 300
Query: 375 AILSGRIPNVEIRRMQHDG----SKETVEKEFFAE----TSSDEEDEMMVEDA------- 419
+L+G ++R DG ++ EF AE T+ + V DA
Sbjct: 301 MVLAGGESGGQVREKAADGTILNARPIPRPEFRAEVRVLTARRRCVWLPVADAPPLRAPG 360
Query: 420 ---------MEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQL 470
G + ++ P DC + + ++
Sbjct: 361 NSLAAPSLPAPTPAPLPGSARSLACCPVQHRRDCPAAAVPVSTQIF-------------- 406
Query: 471 QMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
+T +++ ADA+LAL +K+K N+ ++A A+ +PIYA KTS + KA R L
Sbjct: 407 -------ITSSLANADAVLALRAKVKHNAELRAMARESSVPIYAVKTSGSANLVKAFRTL 459
Query: 531 --IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQI 588
ID G S+ SE+ ALEEA+VA+ ++VIP + VEL+PR +L QI
Sbjct: 460 LGIDPSAGGAFGPGSD-----SEEGPALEEAQVAVTEIVIPLHQPVELMPRARSVLEAQI 514
Query: 589 DLIRKYQLHYQRVGKEPDARLRILP 613
L+ +Y+L ++ VG +AR+RILP
Sbjct: 515 KLLERYKLSHEIVGAGAEARIRILP 539
>gi|67922837|ref|ZP_00516336.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
gi|67855330|gb|EAM50590.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
Length = 604
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/581 (45%), Positives = 368/581 (63%), Gaps = 53/581 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP + + EHP L+EVVMDLGR P ARFP L D ++ +E+
Sbjct: 34 DLSQLLDILPSSISHCLKEHPNCDRLVEVVMDLGRVPEARFPGESIYLGDVPVSAADLEY 93
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ +VG F+ DNRAGI RTLHRISA+RNR G IIGLTCRVGRAV G+ ++++DLV+ G S
Sbjct: 94 SIQRVGIFSGDNRAGIERTLHRISAMRNRGGDIIGLTCRVGRAVFGTISMIRDLVETGQS 153
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 154 LLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAT 213
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QHK++IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 214 PELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLLKNP 273
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + + +H + T+D
Sbjct: 274 TLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVIHEDVANTID 333
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--------------------------------- 401
+L P ++R + G + ++E
Sbjct: 334 ILLRSGHPKPQVRTVDEKGEVQITQEEPDITPNPASFGRNSGGIVQQPKGWRASGKMTPV 393
Query: 402 -FFA-----ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYV 455
FA SS E + +++ + E + KI+ PN GED + +Y
Sbjct: 394 TPFAGKRGSNLSSASEFDRLLDASWTQPEPKGDKIRVPG---PN-GED-----FPVYIYP 444
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
YGI + + Q+I+ L + + LT ++ AD ++AL S LK S ++ AK +PI+
Sbjct: 445 YGIGRSQLEQVIEVLNL--PIVLTKDLDNADVVVALRSHLKNQSKLRQVAKMRQVPIHGV 502
Query: 516 KTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K++++ QIT+ L+ L+ + T E DLR + ++++ALEEAR+A+EQ+V+PKG+
Sbjct: 503 KSNTIPQITRTLQRLLGMDEAKTPETADLRLFTRGGNDDELEALEEARLAVEQIVLPKGQ 562
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 563 PVELLPRSPKVRKMQHELVEHYRLQSDSFGEEPNRRLRIYP 603
>gi|428302124|ref|YP_007140430.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
gi|428238668|gb|AFZ04458.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
Length = 588
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/586 (45%), Positives = 366/586 (62%), Gaps = 51/586 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++R + HP+ L+EVV+DLGR+P ARFP LS+ IT I+
Sbjct: 6 DLQKLLDVLPQDLRQALENHPQRDSLVEVVLDLGRRPEARFPGSAEYLSEQPITQQQIDE 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
S+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRA+ G+ +++DLV+ G S
Sbjct: 66 CVSRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAIFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GD+PHP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PEEQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK TF AVE+ + VH S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKALPTFEIAVEMHERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMM-----VEDAM--------- 420
+L GR P+ + R + +G K + + A + M VE+A
Sbjct: 306 MLLRGRQPSPQTRTVDENG-KVAIARHLTAVNGGNAGSGSMVSMTNVEEAFAPPRPSNGW 364
Query: 421 ------------------------------EVTEERTGKIQFISEFPPNIGEDCWEDGLL 450
+ +E G F E P ED L
Sbjct: 365 RTSGKMVPLQPVGARLNGHGNGTSGRSEFDRLLDESWGLDDFELELNPRQAGPNGED-LP 423
Query: 451 IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDI 510
+ +Y YG+ + + Q+I L + + LT + AD++LAL S +K ++ ++ AKS +
Sbjct: 424 LHVYPYGVSRSQLEQVISVLNL--PIALTKELDNADSILALRSHVKNHAKLRQLAKSRHL 481
Query: 511 PIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI---NLSEKIDALEEARVAIEQVV 567
P++ K+S++ QIT+ LR +++ EF D R + +++DALEEAR+A+EQ+V
Sbjct: 482 PLHMIKSSTIPQITRGLRRMLNMDDPEFGDERELQLMLHNGTDDEVDALEEARLAVEQIV 541
Query: 568 IPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
IPKG+ VELLPR + + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 542 IPKGQPVELLPRSAQVRKMQHELVEHYRLKSDSFGEEPNRRLRIYP 587
>gi|334116745|ref|ZP_08490837.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
gi|333461565|gb|EGK90170.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
Length = 588
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/591 (45%), Positives = 364/591 (61%), Gaps = 61/591 (10%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++P+E+R + +HP+ LIE+VMDLGR+P ARFPS LS ++ H+ +
Sbjct: 6 DLNRLLDIVPDEIRQPLEQHPQRNNLIEIVMDLGRRPEARFPSLAEPLSQTPVSKAHLNY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISA+RNR G IIGLT RVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGHFGGDNRAGIEQTLHRISALRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 186 PELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + +H + +D
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERERWVIHERVADAID 305
Query: 375 AILSGRIPNVEIRRMQHDGS---------------------------------------- 394
+L GR P+ +IR + G
Sbjct: 306 TLLRGREPHQQIRSVSESGEVIIERDSAAPPARFPGMAASSGPAAVSAMRPVTPISGWRS 365
Query: 395 -----KETVEKEFFAETSSDEED----EMMVEDAMEVTEERTGKIQFISEFPPNIGEDCW 445
E FA S+ + E ++E+++ V E ++ PN GED
Sbjct: 366 AGKMVPMPAPSENFAAKSAPVSETRYFEQLLEESLSV-EPVPNPGRYSHNVGPN-GED-- 421
Query: 446 EDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAA 505
L + +Y YGI + Q+I L + V LT +I AD +LAL S ++ S ++ A
Sbjct: 422 ---LPLHVYPYGIPRHQLEQVISTLNL--PVLLTKDIESADVVLALRSNVRNQSKLRHLA 476
Query: 506 KSHDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVA 562
K+ +P++ K ++ + +ALR L+ D T E DL + S++I+ALEE R+A
Sbjct: 477 KTRQVPLHTIKAGTIPHVARALRRLLDMDDPGTPEVADLALFARSGSSDEIEALEETRLA 536
Query: 563 IEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+EQ+VIPKG+ VELLPR + +Q +L+ Y L G+EP+ RLRI P
Sbjct: 537 VEQIVIPKGQPVELLPRSPNVRKMQHELVEHYHLKSHSFGEEPNRRLRIYP 587
>gi|186685424|ref|YP_001868620.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc punctiforme PCC 73102]
gi|186467876|gb|ACC83677.1| single-stranded nucleic acid binding R3H domain protein [Nostoc
punctiforme PCC 73102]
Length = 577
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/578 (46%), Positives = 365/578 (63%), Gaps = 46/578 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP++++ + HP+ L+EVV+DLGR+P ARFP+ LS+ +T I+
Sbjct: 6 DLQKLLDILPQDLQQVLESHPKRDSLVEVVLDLGRRPEARFPNQAEYLSEIPVTQEQIDD 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 66 CIQRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GD+ HP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PEQQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 246 TLADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKE----------------TVEKEFFAETSSD--EEDEMMV 416
+L GR + R + G TVE+ F +S+ MV
Sbjct: 306 NLLRGRQATPQTRTVDDQGKVAVTRQLAVVNGRGGQLGTVEESFPPARASNGWRSSGQMV 365
Query: 417 EDAMEVTEERTGKIQF------------------ISEFPPNIGEDCWEDGLLIRLYVYGI 458
E TG+ +F + P GED L + +Y YG+
Sbjct: 366 ALPQLPVERVTGRSEFDRLLDESFNYSESIDLDAATRQPGPNGED-----LPLHVYPYGV 420
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ Q+I L + V LT +I ADA+LAL S +K ++ ++ AK+ +PI+ K+S
Sbjct: 421 SRHQLEQVISVLTL--PVVLTKDIDSADAILALRSHVKNHAKLRQMAKARHVPIHMIKSS 478
Query: 519 SLVQITKALRALIDDHTGEFKD---LRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
++ QIT+ LR L++ E D L+ +++DALEEAR+A+EQ+VIPKG+ VE
Sbjct: 479 TIPQITRGLRRLLNMDDPEMTDDLELQLFLHSGSDDEMDALEEARLAVEQIVIPKGQPVE 538
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR + +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 539 LLPRSPQVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 576
>gi|282897384|ref|ZP_06305386.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
gi|281198036|gb|EFA72930.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
Length = 573
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 266/574 (46%), Positives = 369/574 (64%), Gaps = 41/574 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP+++ ++ H + L+EVV+DLGR P ARFP LS IT I+
Sbjct: 5 DLQKLLEILPQDLEKQLQYHSQRDNLVEVVLDLGRLPEARFPGAAEYLSQSPITQSQIDD 64
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ +++DLV+ G S
Sbjct: 65 CIQRVGNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKS 124
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDI HP IG ARRMQV
Sbjct: 125 ILMLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVAR 184
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VI+IDEIGT+LEA+A+ TIA+RG+QLV TAHG IENLI NP
Sbjct: 185 PELQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAHGNQIENLIKNP 244
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGD+EA RR QKTVLERK P TF AVE++ + VH S+ TVD
Sbjct: 245 TLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERWVVHESVAETVD 304
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEF-----FAETSSDEEDEMMVEDAMEVTEER-TG 428
+L GR PN + R + G K ++ + + + EE+ + ++ +V R +G
Sbjct: 305 TLLRGRQPNPQTRTVDEQG-KVSIARPLTVVNGYGSGLASEEESLAIK---QVNGWRASG 360
Query: 429 KIQFISEFPPNIGEDCWEDGLL--------------------------IRLYVYGILEAT 462
++ + P G D LL + +Y YG+
Sbjct: 361 QMVALPPLSPERGTTSEFDRLLDESFDHGDSFNLGKIRSAGPNGEDLPLHVYPYGVSRHQ 420
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ +I+ L++ V LT +I ADA+LAL S +K ++ ++ AKS +PI+ K+S++ Q
Sbjct: 421 LEHVIELLKL--PVALTKDIDGADAILALRSHVKNHAKLRQLAKSRHLPIHVIKSSAIPQ 478
Query: 523 ITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPR 579
I++ LR L+ D GE +L+ ++IDALEEAR+A+EQ+VIPK + VELLPR
Sbjct: 479 ISRGLRRLLNMDDLDLGEDCELQLLLHEGSDDEIDALEEARLAVEQIVIPKSQPVELLPR 538
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+++ +Q +L+ Y+L G+EP+ RLRI P
Sbjct: 539 SAHVRKMQHELVEHYRLKSHSFGEEPNRRLRIYP 572
>gi|113476582|ref|YP_722643.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
gi|110167630|gb|ABG52170.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
Length = 590
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/588 (45%), Positives = 371/588 (63%), Gaps = 53/588 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++P+++R + EH E LIE+VMDLGR P ARFPS L++ ++ + +
Sbjct: 6 DLYRLLEIVPDKIRRPLQEHQERNHLIEIVMDLGRLPEARFPSHVEYLAEIPVSRKDLSY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ ++G F+ DNRAGI +TLHRISA+RNR G +IGLTCRVGRAV G+ ++++LV+ G S
Sbjct: 66 SMERIGTFSSDNRAGIEQTLHRISAMRNRTGEVIGLTCRVGRAVFGTIAMIRELVETGRS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ +KRV+I+DTS+EI G+GD+PH IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHSAIGRARRMQVAS 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENH P+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 186 PEQQHRVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLVKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RR QKTVLERK P TF AVE++ + VH + TVD
Sbjct: 246 TLSDLIGGIQAVTLGDDEARRRSSQKTVLERKAPPTFEIAVEMLERHRWVVHEQVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSS------------DEEDEMMV------ 416
A+L G+ PN E+R M +G + +++EF + ++ EM++
Sbjct: 306 ALLRGKKPNPEVRTMDDNGEVK-IKREFNSSPGFGSGVNRNAGRLLEQSGEMLISGGSFR 364
Query: 417 EDAMEVTEERTGKI-------------QFISE-------FPPNIGEDCWEDG-------- 448
+ + TGKI Q + E F + G D W++
Sbjct: 365 DSGYMMPLSNTGKISQPLEFSEAKSFEQLLDESLSGNGMFSHDTG-DRWDNKDAGPNGED 423
Query: 449 LLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSH 508
L + +Y Y I + Q+I L + V LT +I AD +LAL S +K S ++ AAK+
Sbjct: 424 LPLHIYPYAIPRHQMEQVITTLGL--PVVLTKDIDSADVVLALRSHTRKQSKLRHAAKTR 481
Query: 509 DIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQ 565
+PI+ K S L QI KALR L+ D T EF DL ++++ALEE R+A+EQ
Sbjct: 482 HVPIHVIKNSGLPQIAKALRRLLDMEDPATPEFADLNLFAASASEDEMEALEETRLAVEQ 541
Query: 566 VVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+VIP G+ VELLPR + +Q +L+ Y+L G EP+ RLRI P
Sbjct: 542 IVIPNGQPVELLPRSPKVRKMQHELVEHYRLKSASFGDEPNRRLRIYP 589
>gi|428316917|ref|YP_007114799.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428240597|gb|AFZ06383.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 588
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/592 (45%), Positives = 369/592 (62%), Gaps = 63/592 (10%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++P+E+R + +HP+ LIE+VMDLGR+P ARFPS LS ++ + +
Sbjct: 6 DLNRLLDIVPDEIRQPLEQHPQRNNLIEIVMDLGRQPEARFPSLAEPLSQTPVSKADLNY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI +TLHRISA+RNR G IIGLT RVGRAV G+ +++DLV+ G S
Sbjct: 66 CIERVGHFGGDNRAGIEQTLHRISALRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG +ENL+ NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF AVE++ + +H + ++D
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKSPPTFEIAVEMLERQRWVIHERVADSID 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKE--------------------------------- 401
+L GR PN +IR + G + +E+E
Sbjct: 306 TLLRGREPNQQIRSVSETG-EVIIEQESATPPARFPGIAASGSTAAVSAIRPVTPLSGWR 364
Query: 402 --------------FFAETSSDEED---EMMVEDAMEVTEERTGKIQFISEFPPNIGEDC 444
F A+++ E E ++E+++ V E +F PN GED
Sbjct: 365 SAGKMVPMPAPSQNFAAKSAPVAETRYFEQLLEESLSV-EPVPKPGRFSQNVGPN-GED- 421
Query: 445 WEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAA 504
L + +Y YGI + Q+I L + V LT +I AD +LAL S ++ S ++
Sbjct: 422 ----LPLHVYPYGIARHQLEQVISTLNL--PVLLTKDIESADVVLALRSNVRNQSKLRHL 475
Query: 505 AKSHDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARV 561
AK+ +P++ K ++ + +ALR L+ D T E DL + S++++ALEE R+
Sbjct: 476 AKTRQVPLHTIKAGTIPHVARALRRLLDMDDPGTPEVADLALFARSGSSDELEALEETRL 535
Query: 562 AIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
A+EQ+VIPKG+ VELLPR + +Q +L+ Y L G+EP+ RLRI P
Sbjct: 536 AVEQIVIPKGQPVELLPRSPNVRKMQHELVEHYHLKSHSFGEEPNRRLRIYP 587
>gi|224109840|ref|XP_002315329.1| predicted protein [Populus trichocarpa]
gi|222864369|gb|EEF01500.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/476 (52%), Positives = 342/476 (71%), Gaps = 15/476 (3%)
Query: 50 FRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGR 109
+R+ SV+ ++ S S + + EL L LLP M+ +S H E+ ELIEVV+DLGR
Sbjct: 72 YRTGNGSVIDLENSASTSSLVNSNSELDLFLELLPLRMKGELSGHREIGELIEVVLDLGR 131
Query: 110 KPLARFPSGDFSLSDCQITVHH--IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAI 167
KP+ARFPSGDF + C+ V H ++HA S+VGDF+ DNR+GI +LHRISAIRNRK I
Sbjct: 132 KPIARFPSGDFVI--CEQPVRHEDLKHAISKVGDFSDDNRSGIDSSLHRISAIRNRKMQI 189
Query: 168 IGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV 227
IGLTCRVGRAVSGSA +++DLV+ G+S+L IG PGVGKTT+IREIAR+LA+D +KRV+IV
Sbjct: 190 IGLTCRVGRAVSGSAEIIRDLVEGGSSILVIGRPGVGKTTLIREIARMLADDQRKRVVIV 249
Query: 228 DTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
DTS+EIGG+GD+PH GIG ARRMQVPN MQH ++IEAVENHMP+ I+IDEIGT+LEA+A
Sbjct: 250 DTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNIMIEAVENHMPETIIIDEIGTELEALA 309
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
ASTIAQRG+QLV TAHG+TI+N+I NPSL++L+GG+++VTLGDEEA +R VQKT+LERKG
Sbjct: 310 ASTIAQRGVQLVGTAHGMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKG 369
Query: 348 PSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETS 407
P TF+CAVE++++TE RVHH L+ATVDAIL+G+ P EIR + +G E
Sbjct: 370 PPTFTCAVEMITRTECRVHHRLDATVDAILAGKSPLFEIRHVDTEGDDSLKLIPILQENL 429
Query: 408 SDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIR-------LYVYGILE 460
+E D+ + + E +E + P W+ R +Y I++
Sbjct: 430 IEESDDSL--NDKERCDEVESDEEDEDYCPKQ--SKTWKSSGTERKRNSPVCVYTCKIVD 485
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
+ ++Q+ K + +++ + +TD+I ADA+LA S++K+N I+ AK H +P++ K
Sbjct: 486 SDLLQVAKVMGIENEIDVTDDIGAADAILASSSEMKQNPWIRGVAKYHHLPVFVIK 541
>gi|427417957|ref|ZP_18908140.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
gi|425760670|gb|EKV01523.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
Length = 594
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/595 (45%), Positives = 379/595 (63%), Gaps = 62/595 (10%)
Query: 62 SRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS 121
S+ S ++DD D +LL++LPE +R +S HP+ +LIEV++DLGR+P ARFP
Sbjct: 18 SKSSAPIHDDLD----QLLSILPEGLRAPLSNHPQRSQLIEVILDLGRRPEARFPGKADY 73
Query: 122 LSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
LS+ I+ ++H +VG F DNRAGI +TLHRISA+RNR G IIGLTCRVGRAV G+
Sbjct: 74 LSEQVISKEDLQHCIERVGAFGGDNRAGIEKTLHRISAMRNRAGTIIGLTCRVGRAVFGT 133
Query: 182 ANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPH 241
+++DLV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPH
Sbjct: 134 VEMIRDLVEAGQSILLLGRPGVGKTTALREIARVLADDLDKRVVIIDTSNEIAGDGDIPH 193
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
P IG ARRMQV E QH+V+IEAVENH P+VI+IDEIGT+LEA+AA TIA+RG+QLV T
Sbjct: 194 PAIGRARRMQVARPEQQHQVMIEAVENHTPEVIIIDEIGTELEALAARTIAERGVQLVGT 253
Query: 302 AHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKT 361
AHG +ENLI NP+L LIGG+Q VTLGD+EA RRG QK+VLERK P TF A+E++ +
Sbjct: 254 AHGNQLENLIKNPTLADLIGGIQTVTLGDDEARRRGSQKSVLERKAPPTFDMAIEMLERQ 313
Query: 362 ELRVHHSLEATVDAILSGRIPNVEIRRMQHDGS------------------------KET 397
VH + ATVD +L GR+ ++R + +G +E
Sbjct: 314 RWVVHEDVAATVDHLLRGRMSETQVRTVGENGKVSITHELPDIVSQRRTTRRTQRGWREA 373
Query: 398 VEKEFFAE---------------TSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGE 442
+ E A+ ++++E + +++ ++ T ++ + PN GE
Sbjct: 374 GQMEPVAQRVRQHGPTAPTPLPVPTANDEFQALLDRQLD-----TSSLELSTPVGPN-GE 427
Query: 443 DCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQ 502
D L+ +Y YGI + +I L++ V +T + A A+LAL S ++ +S ++
Sbjct: 428 D------LVPIYPYGISREQLHHVIDTLKL--PVSITKELGVAQAVLALRSHVRNHSKLK 479
Query: 503 AAAKSHDIPIYATKTSSLVQITKALRALID----DHTGEFKDLRSEDKINLSEKIDALEE 558
AKS +PIY K++++ QIT+AL+ L+D D + DL + ++++ALEE
Sbjct: 480 TIAKSRQLPIYTVKSNTIPQITRALQRLLDIDPRDQSAAI-DLSLFTRQGEDDELEALEE 538
Query: 559 ARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
AR+A+EQ+VIPKG+ VELLPR + I +Q +L Y+L G EP+ RLRI P
Sbjct: 539 ARLAVEQIVIPKGQPVELLPRSAKIRKMQHELAEHYRLKSLSFGDEPNRRLRIFP 593
>gi|443310712|ref|ZP_21040354.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
gi|442779237|gb|ELR89488.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
Length = 576
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 268/578 (46%), Positives = 364/578 (62%), Gaps = 47/578 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +L+ +LP E++ + +H L+EVVMDLGR P ARFP+ LS ++ +
Sbjct: 6 DLQKLIDILPIEIQQALDQHELRDSLVEVVMDLGRLPEARFPNRAEYLSQVPVSQEQLND 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG F DNRAGI RTLHRISAIRNR G IIGLTCRVGRAV G+ ++++DLV G S
Sbjct: 66 CIERVGHFGGDNRAGIERTLHRISAIRNRTGKIIGLTCRVGRAVFGTIDMIRDLVGTGQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDI HP IG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDITHPAIGRARRMQVSR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+ IVIDEIGT+LEAMAA TIA+RG+QLV TAHG IENLI NP
Sbjct: 186 PELQHQVMIEAVENHMPEAIVIDEIGTELEAMAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q VTLGDEEA RR QKTVLERK P TF AVE+ + +H S+ TVD
Sbjct: 246 TLSDLVGGIQAVTLGDEEARRRRSQKTVLERKAPPTFEIAVEMQERQRWVIHESVADTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFA-----ETSSDEEDEMMVEDAMEVTEE---- 425
+L G+ P ++R + D +K T+ +E A SS + E ++E +
Sbjct: 306 NLLRGKPPTPQVRTVGED-NKVTITQEQPAVKTARSNSSWQGGEEIIESNLTTMRSPGWR 364
Query: 426 -----------RTGKIQFISEF----------------PPNIGEDCWEDGLLIRLYVYGI 458
TG+I + EF P GED L + +Y YG+
Sbjct: 365 ETGKMLPTPQVATGRISGVGEFDRLLEESFDRFGYSPTPGPNGED-----LPLHIYPYGV 419
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ + Q+I+ L + + LT +I AD +LAL S LK +S ++ A+ +PI+ K S
Sbjct: 420 SRSQLDQIIEVLNL--PIVLTKDIDGADGILALRSHLKSHSKLRHIARVRQVPIHMIKAS 477
Query: 519 SLVQITKALRALID---DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVE 575
++ QIT++LR L++ G+ +++ + +++DALEEAR+A+EQ+VIPKG+ VE
Sbjct: 478 TIPQITRSLRRLLNMDEPGLGDEREMSLFSRNGSEDEMDALEEARLAVEQIVIPKGQPVE 537
Query: 576 LLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
LLPR + +Q +L+ Y L G EP+ RLRI P
Sbjct: 538 LLPRSPKVRKMQHELVEHYHLKSDSFGDEPNRRLRIYP 575
>gi|220906040|ref|YP_002481351.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7425]
gi|219862651|gb|ACL42990.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7425]
Length = 584
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/568 (46%), Positives = 361/568 (63%), Gaps = 50/568 (8%)
Query: 86 EMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVD 145
+ R+ +S HP +LIEVVMDLGR+P ARFP LS I+ +++ +VG F+ D
Sbjct: 26 KFRLPLSHHPRRDQLIEVVMDLGRQPEARFPGEAEYLSTDLISQADLDYCVQRVGRFSGD 85
Query: 146 NRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGK 205
NRAGI TLHRISA+RNR+G I+GLTCRVGRAV G+ +++DLV+ G S+L +G PGVGK
Sbjct: 86 NRAGIEYTLHRISALRNRQGDIVGLTCRVGRAVFGTIGMIRDLVESGKSILLLGRPGVGK 145
Query: 206 TTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
TT +RE+ARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV E+QH+V+IEA
Sbjct: 146 TTALREMARVLADELLKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEA 205
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN 325
VENHMP+VIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG IENLI NP+L L+GG+Q+
Sbjct: 206 VENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNRIENLIKNPTLSDLVGGIQS 265
Query: 326 VTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVE 385
VTLGDEEA RRG QK+VLERK P TF AVE++ + VH + TVD +L GRIP +
Sbjct: 266 VTLGDEEARRRGSQKSVLERKAPPTFEIAVELLERERWVVHEQVAETVDHLLRGRIPTPQ 325
Query: 386 IRRMQHDG-----------------SKETVEKEFF------------------AETSSDE 410
IR + G +K T+ + E S E
Sbjct: 326 IRTLSETGKVIITHELPQTPGLVPETKSTLAAPGWRSTGQMLPLPTYRQEVSPKEPSYKE 385
Query: 411 ED--EMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIK 468
+ ++ED++ TE ++ PN GED L + +Y Y + + Q+++
Sbjct: 386 QSYFHQLLEDSLSQTEAEAFRLN--KSVGPN-GED-----LPLHVYPYAVSRQQLEQVVQ 437
Query: 469 QLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALR 528
L + V LT +I AD +LAL S LK ++ ++ A++ IPI+ K +S+ I + LR
Sbjct: 438 TLNL--PVVLTKDIDGADVVLALRSHLKNHAKLRHLARARHIPIHTIKANSIPHIARGLR 495
Query: 529 ALID---DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILS 585
L++ E +L ++I+ALEEAR+A+EQ+VIPKG+ VELLPR + I
Sbjct: 496 RLLNMDEPDAPEVGELSLYAPRGSGDEIEALEEARLAVEQIVIPKGQPVELLPRSANIRK 555
Query: 586 IQIDLIRKYQLHYQRVGKEPDARLRILP 613
+Q +LI Y+L + G+EP+ RLRI P
Sbjct: 556 MQHELIEHYRLTSRSFGEEPNRRLRIYP 583
>gi|284929559|ref|YP_003422081.1| hypothetical protein UCYN_10250 [cyanobacterium UCYN-A]
gi|284810003|gb|ADB95700.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 590
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 268/583 (45%), Positives = 370/583 (63%), Gaps = 55/583 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +LL +LP + + H E LIEVVMDLGR P ARFP L I+ +E+
Sbjct: 18 ELNQLLDVLPPNICHYIKNHSECNHLIEVVMDLGRLPEARFPEYSVYLGATLISATDLEY 77
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F+ DNRAGI +TLHRISAIRNRKG+IIGLTCRVGRAV G+ ++++DL++ G S
Sbjct: 78 TIQKIGAFSSDNRAGIEKTLHRISAIRNRKGSIIGLTCRVGRAVFGTISIIKDLIETGKS 137
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA+D+ KRV+I+DTS+EI G+ D+PH IG ARRMQV
Sbjct: 138 ILLLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDSDVPHSSIGRARRMQVSA 197
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAHG IENL+ NP
Sbjct: 198 PELQHRVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNEIENLMKNP 257
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q+VTLGDEEA RRG QKTVLERK P TF A+EI+ + + +H + +D
Sbjct: 258 TLSDLVGGIQSVTLGDEEAKRRGCQKTVLERKAPPTFEIAIEILERQKWNIHQDVACAID 317
Query: 375 AILSGRIPNVEIRRMQHDG---------SKETVEKEF----------------------- 402
++L R PN EIR + +G + E + K F
Sbjct: 318 SLLRNRKPNTEIRTVSQNGEVSIDHQKSNDEQLLKTFEHNPFNVVTQPKGWRASGKMVPI 377
Query: 403 --FAETSSDEEDEMMVEDAME-------VTEERTGKIQFISEFPPNIGEDCWEDGLLIRL 453
S D+ +E + D + +++ K++ PN GED L I +
Sbjct: 378 PTLESKSVDKLNETLEFDRLLDASWYQFYDKDKEDKMKISG---PN-GED-----LPIHI 428
Query: 454 YVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIY 513
Y YGI + Q+IK L++ + +T ++ AD ++AL S LK S ++ AK IPI+
Sbjct: 429 YPYGIGRFQLEQVIKILRL--PIVVTKDLDNADVVIALRSYLKNQSKLRQVAKMRQIPIH 486
Query: 514 ATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPK 570
K++++ QIT+ L+ L+ + E +DL K + ++++ALEEAR+AIEQ+V+PK
Sbjct: 487 GIKSNTVPQITRTLQKLLGINETQVSEIRDLHLFTKGDEDDELEALEEARLAIEQIVLPK 546
Query: 571 GESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ VELLPR + + +Q +LI Y LH G+EP+ RLRI P
Sbjct: 547 CQPVELLPRSAKVRGMQHELIEHYHLHSDSFGEEPNRRLRIYP 589
>gi|427711502|ref|YP_007060126.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
gi|427375631|gb|AFY59583.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
Length = 571
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/573 (45%), Positives = 359/573 (62%), Gaps = 40/573 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V DD L +LL +LP ++ + +H +L+E+V+DLGR P ARF G LS +
Sbjct: 11 VTDD----LPQLLDILPHYLQATLRDHIHREDLLEIVLDLGRPPQARFVKGSEDLSQTPV 66
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ +E+ +VG F+ DNRAGI RTLHRISAIRNR+G IIGLTCRVGRAV G+ L++D
Sbjct: 67 SREDLEYCVQRVGQFSGDNRAGIERTLHRISAIRNRQGTIIGLTCRVGRAVFGTIGLIRD 126
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
LV+ S+L +G PGVGKTT +RE+ARVLA+D KRV+I+DTS+EI G+GDIPHP +G A
Sbjct: 127 LVESEQSILLLGRPGVGKTTALREMARVLADDLHKRVVIIDTSNEIAGDGDIPHPALGRA 186
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG +
Sbjct: 187 RRMQVARPELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAHGNRL 246
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NP+L L+GG+Q+VTLGD+EA RRG QK+VLERK P TF AVE++ + VH
Sbjct: 247 ENLIKNPTLADLVGGIQSVTLGDDEARRRGTQKSVLERKAPPTFPIAVEMLERERWVVHD 306
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEER- 426
++ TVD +L G PN + R + +G E V + E E + + + + R
Sbjct: 307 NVAETVDQLLRGHTPNPQTRSVNENG--EVVITQAPPEAKKLEIKTVPLGSEWKESNWRA 364
Query: 427 TGKIQFISEFPPNIGEDCWE------------------DGLLIRLYVYGILEATVVQLIK 468
+G+I + P +E + L I +Y Y + + Q I
Sbjct: 365 SGQIYPLPATPSERSRPDYEFASLLEQSETLSPLGPNGEELPIHVYPYAVSRHHLEQAIN 424
Query: 469 QLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALR 528
L + + +T I AD +L L S LK S ++ A H IP++ K +S+ QI + L+
Sbjct: 425 TLNL--PIVVTKEIDTADVILTLRSHLKTQSKLRHLAHLHHIPVHTIKANSMAQIVRGLQ 482
Query: 529 ALIDDHTGEFKDLRSEDKINLS--------EKIDALEEARVAIEQVVIPKGESVELLPRP 580
L+ ++ D +NL+ ++I+ALEEAR+A+E++VIPK + VELLPR
Sbjct: 483 HLLG-----MEEPSPADGVNLALFAPTGNDDEIEALEEARLAVEKIVIPKKQPVELLPRS 537
Query: 581 SYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ I IQ +LI Y+L Q G+EP RLRI P
Sbjct: 538 ASIRRIQHELIEHYRLTSQSFGEEPYRRLRIYP 570
>gi|11465747|ref|NP_053891.1| hypothetical protein PopuCp096 [Porphyra purpurea]
gi|1723347|sp|P51281.1|YCF45_PORPU RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF565
gi|1276747|gb|AAC08167.1| trnS (chloroplast) [Porphyra purpurea]
Length = 565
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/561 (44%), Positives = 360/561 (64%), Gaps = 24/561 (4%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP +R + +H LIEVVMDLGR+P ARFP LS I+ +++
Sbjct: 6 DLEKLLEILPHFVREPLKQHSNRKNLIEVVMDLGRRPEARFPGNPEYLSQRSISWQDLDY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F+ DNRAGI +TLHRIS++RNR+G+IIGLTCRVGRAV G+ ++++DL++ G S
Sbjct: 66 CVKKVGNFSGDNRAGIEKTLHRISSMRNREGSIIGLTCRVGRAVFGTISIIRDLLEQGDS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVL+++ +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 ILLLGKPGVGKTTAVREIARVLSDEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQ 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
++QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG +E+LI NP
Sbjct: 186 PDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLESLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QK++LERK F A+EI + VH +E T+D
Sbjct: 246 TLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKAWIVHEKVEETID 305
Query: 375 AILSGRIPNVEIRRMQHDG-----SKETVEKEFFAETSSDEEDEMMVEDAMEVTEER--- 426
IL G P V+ R++Q +G + E + SS + ++ ++R
Sbjct: 306 QILQGHQPFVQKRQIQDNGRILIKCYPSQSTEVLSTNSSSLQKMSSLKQKTHFLQQREVK 365
Query: 427 -------------TGKIQFISEFPPNIGEDCWE-DGLLIRLYVYGILEATVVQLIKQLQM 472
T + P NI ++ + + LY Y + + +I L
Sbjct: 366 NKTFDLNKLENRDTSLLSTTINTPVNINNHSFQVEASIQYLYAYSLSWQHITSVISAL-- 423
Query: 473 DDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALID 532
D + LT I ++DA+LAL S++K+N+ ++ AKS I IY + S++ QIT+ALR +++
Sbjct: 424 DLPIILTKEIEKSDAILALRSQVKQNTKLRQIAKSRQIIIYTIQNSTVPQITRALRKILN 483
Query: 533 DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIR 592
+T + K +I AL+EA++AIE +++ + V+L PR +YI +Q +LI
Sbjct: 484 INTSSDLNWVKLCKSKKFYEIQALQEAKLAIEIIILNENSIVQLTPRSAYIRKMQHNLID 543
Query: 593 KYQLHYQRVGKEPDARLRILP 613
YQL + G+EP +LRI P
Sbjct: 544 NYQLRARSFGEEPYRKLRIYP 564
>gi|358346746|ref|XP_003637426.1| ATPase-like protein, partial [Medicago truncatula]
gi|355503361|gb|AES84564.1| ATPase-like protein, partial [Medicago truncatula]
Length = 493
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/412 (56%), Positives = 304/412 (73%), Gaps = 11/412 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL L LLP EMR+ + H E+ LIEVVMDLGRKPLARFPSGD+ +S I + H
Sbjct: 85 ELDMFLELLPLEMRMELYRHQEIGGLIEVVMDLGRKPLARFPSGDWVISQRPINHDDLRH 144
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A S+VG+F+ DNR+GI +LHRISAIRNR+ IIGLTCRVGRAVSGSA ++ DLV+ G S
Sbjct: 145 AISKVGEFSDDNRSGIDSSLHRISAIRNRQMQIIGLTCRVGRAVSGSAKIIHDLVEGGGS 204
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L IGPPGVGKTT+IRE AR+LA+++ KRV+IVDTS+EIGG+GD+PH GIG ARRMQVPN
Sbjct: 205 ILVIGPPGVGKTTLIRETARMLADEFLKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPN 264
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
MQH ++IEAVENHMP+ I+IDEIGT+LEA+AASTIAQRG+QLV TAHG TIE+++ NP
Sbjct: 265 VNMQHSIMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGTTIESIMKNP 324
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L++L+GG+++VTLGDEEA +R VQKT+LERKGP TF+CAVE++SKTE RVHH L+ATVD
Sbjct: 325 YLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISKTECRVHHRLDATVD 384
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
A+L+G+ P E+R D S + V+ E S +E ++ + + + +R
Sbjct: 385 ALLAGKPPVFEVRHWD-DFSNDLVKHAPIPEISHEETSDLNLTNTNITSSDREYDEDDTY 443
Query: 435 EFPPNIGEDCWED--GLLIR------LYVYGILEATVVQLIKQLQMDDAVQL 478
+P + W D G +I+ +Y ILEA +VQ+ K + +D +++
Sbjct: 444 YYPTRSMK--WSDNSGSVIKRSSPMQVYTCKILEADLVQVAKVMGFEDLIEV 493
>gi|378787319|gb|AFC39950.1| hypothetical protein [Porphyra umbilicalis]
Length = 565
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/561 (44%), Positives = 361/561 (64%), Gaps = 24/561 (4%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +LL +LP +R + +H LIEVVMDLGR+P ARFP LS I+ +++
Sbjct: 6 DLEKLLEILPNFVREPLKQHSNRKNLIEVVMDLGRRPEARFPGNPEYLSQRSISWQDLDY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+VG+F+ DNRAGI +TLHRIS++RNR+G+IIGLTCRVGRAV G+ ++++DL++ G S
Sbjct: 66 CVKKVGNFSGDNRAGIEKTLHRISSMRNREGSIIGLTCRVGRAVFGTISIIRDLLEQGDS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ +KRV+I+DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 126 ILLLGKPGVGKTTAVREIARVLADEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
++QH+V+IEAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG +E+LI NP
Sbjct: 186 PDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLESLIKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QK++LERK F A+EI + VH +E T+D
Sbjct: 246 TLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKVWIVHDKVEQTID 305
Query: 375 AILSGRIPNVEIRRMQHDG----------SKETVEKEFF-AETSSDEEDEMMVEDAMEVT 423
IL G P V+ R++Q +G S E + F + S + + V EV
Sbjct: 306 QILQGHQPFVQKRQIQDNGRILIKCYPSHSIEVLSTNFLRPQKMSSLKQKTHVWHQKEVK 365
Query: 424 EER----------TGKIQFISEFPPNIGEDCWE-DGLLIRLYVYGILEATVVQLIKQLQM 472
++ T + P NI + + + LY Y + + +I L
Sbjct: 366 DKTSDLNKLENRDTSLLSTSINTPININNQSFPVEASIQYLYAYSLSWQHIASVISSL-- 423
Query: 473 DDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALID 532
D + LT + ++DA+LAL S++K+N+ ++ AKS + IY + S++ QIT+ALR +++
Sbjct: 424 DLPIILTKELEKSDAILALRSQVKQNAKLRQIAKSRQLIIYTIQNSTVPQITRALRKILN 483
Query: 533 DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIR 592
+ + K +I AL+EA++AIE +++ + V+L+PR +YI +Q +L+
Sbjct: 484 INISSDLNWVELCKSKKFYEIQALQEAKLAIETIILNENSIVQLMPRSAYIRKMQHNLVD 543
Query: 593 KYQLHYQRVGKEPDARLRILP 613
YQL + G+EP +LRI P
Sbjct: 544 NYQLRARSFGEEPYRKLRIYP 564
>gi|428222285|ref|YP_007106455.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
gi|427995625|gb|AFY74320.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
Length = 588
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/585 (42%), Positives = 363/585 (62%), Gaps = 57/585 (9%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L +LL +LP ++ + E+ +L +L+EVVMDLGR P AR+ + LS+ I+ +
Sbjct: 13 LEQLLEILPISIKTSIEEYGQLDQLVEVVMDLGRSPEARYFNETRYLSEIPISQADLNSC 72
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
+VG+F+ DNRAGI RTLHRISA+RNRKG I+GLTCR+GRA+ G++ +++D V+ G S+
Sbjct: 73 IEKVGEFSGDNRAGIERTLHRISAMRNRKGVIVGLTCRIGRAIYGTSAMIRDFVETGKSI 132
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PG+GKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG +RRMQV
Sbjct: 133 LLLGRPGMGKTTALREIARVLADEINKRVVIIDTSNEIAGDGDIPHPAIGRSRRMQVATP 192
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG + NLI NP+
Sbjct: 193 ELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNQLANLIKNPT 252
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L L+GG+Q+VTLGDEEA RRG QK++LERK P TF A+E+ + + VH + T+D
Sbjct: 253 LSDLVGGIQSVTLGDEEARRRGTQKSILERKAPPTFDIAIEMTERYKWIVHKDVAETIDG 312
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS- 434
+L GR P ++R + +G E ET E +V++ + TG+++ +
Sbjct: 313 LLRGREPAFQVRAVDLEGKVNVTE-----ETPKIPE---LVKNPISRGWRSTGRMEPLPL 364
Query: 435 EFPP-----NIGEDCWED-------------------------------------GLLIR 452
++P +I W D G
Sbjct: 365 DYPAPRKAVSIKHREWTDDEPEEVNGSFNSSPFSSSITSINGSLELLNVHKEEKEGEFAY 424
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
+Y+Y + ++I L + V LT ++ AD +L L S ++++S ++ A++ +PI
Sbjct: 425 IYLYAVSRHQAEEVIDALHL--PVILTKDMDNADMILTLRSHIRQHSKLRQVAQTRSLPI 482
Query: 513 YATKTSSLVQITKALRALID----DHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVI 568
+ K+S++ QIT+A R ++ + DL + ++++ALEEAR+A+EQ+VI
Sbjct: 483 HVIKSSTIPQITRAFRRMLQIDEPNSISPVNDLTLFAYGDSEDEMEALEEARLAVEQIVI 542
Query: 569 PKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
PKG+ VELLPR + I +Q +L+ Y L G EP+ RLRI P
Sbjct: 543 PKGQPVELLPRSAEIRKMQHELVEHYHLKSSSFGTEPNRRLRIYP 587
>gi|255090003|ref|XP_002506923.1| predicted protein [Micromonas sp. RCC299]
gi|226522196|gb|ACO68181.1| predicted protein [Micromonas sp. RCC299]
Length = 624
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/592 (43%), Positives = 362/592 (61%), Gaps = 57/592 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSD-CQITVHHIE 133
EL L+ LLP +R ++ H +L+EVV+DLGR P+ARF GD L D + IE
Sbjct: 30 ELDALIDLLPPRVRGALATHQRKLQLLEVVLDLGRLPIARFADGDEILGDGLPLDYDDIE 89
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
A VG+ DNRAGI+RTLHRIS IRNRKG ++GLT RVGRA+ GSA+L++DL+ GA
Sbjct: 90 RAMDTVGEVGGDNRAGINRTLHRISVIRNRKGGVVGLTARVGRAIEGSADLVRDLLASGA 149
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
S+L +G PGVGKTT IREI+R+L+ +Y +RV++VDTS+EIGG+GDIPHPGIG +RRMQVP
Sbjct: 150 SVLLLGRPGVGKTTAIREISRILSEEYGRRVVVVDTSNEIGGDGDIPHPGIGGSRRMQVP 209
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ QH VLIEAV+NH PQV+++DEIGT+LEA AA TI+QRG+Q++ATAHG T+ENL+ N
Sbjct: 210 VPDRQHDVLIEAVQNHTPQVVIVDEIGTELEAKAARTISQRGVQMIATAHGHTLENLLKN 269
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATV 373
P L L+GGV +VTLGD+EA RR VQK+VLER+GP TF AVE+V RVH + V
Sbjct: 270 PLLNDLVGGVVSVTLGDDEARRRRVQKSVLEREGPPTFGAAVEMVDIGHWRVHLDVGVAV 329
Query: 374 DAILSGRIPNVEIRRMQHD----------GSKETVEKEFFAETSSDEEDEMMVEDAMEVT 423
D +L+G P+VE+R + D G E +A
Sbjct: 330 DTLLAGYAPHVELRTLDADTGAVRVQPYLGGGEIQNGGSYAAMFGAGGAVSGGVGFGASV 389
Query: 424 EER--TGKIQFISE-------FPP------NIGEDCWEDGLLIRLYVYGILEATVVQLIK 468
+ +G F + FP + D +D + R+Y + + + ++I
Sbjct: 390 DNTLGSGGPSFWGDVSASGFSFPKAAPTGRSTATDDPDDQSVFRIYPHELDCDVLEEVIA 449
Query: 469 QLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALR 528
L+++D V LTD + +A A+LA+ +++K + ++ AA++ +PIYA K + Q+ +A++
Sbjct: 450 SLELEDRVVLTDQLEDASAVLAVKARVKGATWLRHAARARGMPIYALKVEGMPQLARAMQ 509
Query: 529 ALID---------------------------DHTGEFKDLRSEDKINLSEKIDALEEARV 561
A++ G +D+ S + +++IDALEE R+
Sbjct: 510 AMLGLNGLNKSTDDRDAAAADASMADAAAAAAARGTGRDVSS---VTPADEIDALEEVRM 566
Query: 562 AIEQVVIPKGESVELLPRPSYILSIQIDLIR-KYQLHYQRVGKEPDARLRIL 612
A+EQ+VIP E VELLPR +L +Q DLI +Y+L Y+ G+ R++IL
Sbjct: 567 AVEQLVIPHQEPVELLPRDERLLKMQADLITDEYRLQYEECGEGSSRRIKIL 618
>gi|145341893|ref|XP_001416037.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576260|gb|ABO94329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 552
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/562 (43%), Positives = 357/562 (63%), Gaps = 39/562 (6%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
LL PE +R ++E EL EVV+DLGR P ARFP GD ++ D +T + ++
Sbjct: 1 LLDAAPERVRRALAEDARRLELTEVVLDLGRLPKARFPDGDATIGDELVTYEDLNRMMTK 60
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD------- 191
VGD DNRAGI+ TLHRISAI+NR G +IG TCRVGRA+SGSA L++D++
Sbjct: 61 VGDVGRDNRAGINGTLHRISAIKNRYGKVIGATCRVGRAISGSAELIRDVLDAETSVTTF 120
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
S+L +G PGVGKTT IREI+R+L++++ +RV+IVDTS+EIGG+GD+PH GIG ARRMQ
Sbjct: 121 NNSILLLGRPGVGKTTAIREISRILSDEHSRRVVIVDTSNEIGGDGDVPHRGIGGARRMQ 180
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VPN+ QH VLIEAVENH PQ +V+DEIGT+ EA AA TI++RG+Q++ TAHG T+EN++
Sbjct: 181 VPNASEQHLVLIEAVENHTPQTVVVDEIGTQQEADAAQTISERGVQMIGTAHGHTLENVL 240
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
NP+L LIGGV +VTLGD+EA RRGVQK+VLER GP TF+ AVE++ RVH + A
Sbjct: 241 KNPALCDLIGGVVSVTLGDDEARRRGVQKSVLERAGPPTFTIAVEMLDIGTWRVHTDVAA 300
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQ 431
+VDA+L+G+ P E+R + DG TV E +E ++ E + T++ +
Sbjct: 301 SVDALLAGQSPMTELRVLNEDG---TVTTEADSELAALEIASASRRRSSSTTQQFVDNTR 357
Query: 432 FISEFPPNIGED--------------CWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQ 477
F E GED C L R++ + + + ++++ + + D V
Sbjct: 358 F--ELG---GEDVIVNDVEDDEDDNTCPPHAL--RVFPFKVSRDALERVMESMDLGDRVC 410
Query: 478 LTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI------ 531
L D + +A ++A S++K ++ ++ AA++ +PIYA + + Q+ +AL+A++
Sbjct: 411 LVDLLEDASVVIAPKSQVKTSTWLRHAARARGMPIYAVRADNSAQLVRALQAMLGITGAS 470
Query: 532 DDHTG--EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQID 589
D G ++ R + +++ DALEE R+A+EQ+VIP E VELLPR I+ +Q
Sbjct: 471 DGFNGGSGAQENRQRATTSSADETDALEEVRMAVEQLVIPHREPVELLPRSGRIIEMQQA 530
Query: 590 LIRKYQLHYQRVGKEPDARLRI 611
L+ Y L + VG+ + RLRI
Sbjct: 531 LVDTYMLSHSAVGEGTERRLRI 552
>gi|352096524|ref|ZP_08957351.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
gi|351676174|gb|EHA59328.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
Length = 543
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/539 (44%), Positives = 338/539 (62%), Gaps = 5/539 (0%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RL++LLP E++ ++ +L+EVV+DLGR P AR+ G L IT ++
Sbjct: 9 DLNRLVSLLPAELQASLASPESRDQLLEVVLDLGRVPEARYSGGSTPLGTSTITRADLQA 68
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ G S
Sbjct: 69 MVERLGQFGSDNRAGIERTLHRISAIRNRRGEVVGLTCRVGRAVFGTVAMVRDLLYSGES 128
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVL++D KRV+++DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 129 LLLMGRPGVGKTTALREIARVLSDDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVAR 188
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP
Sbjct: 189 PELQHHVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAHGNALSNLIKNP 248
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+++VTLGD+EA RR QKTVLER TFS AVEI S++ V+ + VD
Sbjct: 249 TLCDLIGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEIHSRSHWAVYREVGRAVD 308
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
A+L G +P+ E R+M DG VE + + S + + +
Sbjct: 309 ALLRGHVPSPEERKMASDGRVLRVEPQV---SPSPLRRPSLAPVPLPDPVDPNPHQPVEM 365
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
P+ ++ L+++ G+ E + + ++ + D AVQ D++ +AD +L++
Sbjct: 366 GSAPSALKEAQAPSTLLQVLCCGLSEQRLDEAVR--RHDWAVQAVDDLVQADVVLSVRQG 423
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
L + ++ A+ +PI K+ +L Q+ +AL L+ D S D + S+
Sbjct: 424 LGRQPELRRQARDAGVPILVIKSDTLPQVERALERLLMRRDHGVSDRDSADSGDQSDASA 483
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ALEE R+A+EQVV+P+G VELLPR + +Q +L+ +Y+L G RLR+ P
Sbjct: 484 ALEECRLAVEQVVVPQGRPVELLPRNDDVRQMQAELVTRYRLRSDVYGTSGQRRLRVFP 542
>gi|51209952|ref|YP_063616.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
gi|50657706|gb|AAT79691.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
Length = 562
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/552 (44%), Positives = 350/552 (63%), Gaps = 27/552 (4%)
Query: 84 PEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
P +R + HPE LIEVVMDLGRKP ARFP G LS IT ++++ ++G+F+
Sbjct: 15 PNFIRHPLQIHPERKVLIEVVMDLGRKPEARFPKGPEYLSKRIITWQDLDYSIKRIGNFS 74
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
DNR+GI RTLHRIS+I+NR+G+ IGLTCRVGRA+ G+ ++++DL+ S+L +G PGV
Sbjct: 75 ADNRSGIERTLHRISSIKNRQGSTIGLTCRVGRAILGTISIIRDLLNTYPSILLLGKPGV 134
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKTT+IREIARVLA++ +KRV+I+DTS+EI G+GD+PHP IG ARRMQV E+QH+V+I
Sbjct: 135 GKTTVIREIARVLADEMEKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVSKPELQHQVMI 194
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGV 323
EA+ENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG +++LI NP L LIGG+
Sbjct: 195 EAIENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLDSLIKNPILSDLIGGI 254
Query: 324 QNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPN 383
Q VTLGD+EA RRG QK++LERK F A+EI + VH S+ VD +L G
Sbjct: 255 QYVTLGDDEAKRRGSQKSILERKASPAFQVAIEIHDRHSWIVHESVGRAVDQLLQGVNLW 314
Query: 384 VEIRRMQHDGS-----KETVEKEFFAETSSDEED--------------EMMVEDAMEVTE 424
V+ R++ +G+ ++ + F + S E + ++ + ++
Sbjct: 315 VQRRKLMPNGAIFVECEQYIPNAFISNISRFEPKVSIKNLKSHNTNIHSINIKSSFNYSQ 374
Query: 425 ERT-GKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNIS 483
E+ K+Q IS P+ ++ +D IR+Y+Y I V +I L + + LT +I
Sbjct: 375 EKNINKLQEISAV-PSFSKNIMKDISNIRVYLYYINSVQVEMIINTLHL--PIILTKDIV 431
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALID-DHTGEFK-DL 541
+AD +L+L S K N+ ++ AK I IY +S+ I +AL +++ D + +
Sbjct: 432 QADVILSLRSGFKHNTKLKQVAKIRHITIYTICSSTSANIKRALTKIVNIDKVSNYNWNT 491
Query: 542 RSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRV 601
E+ + +I L E R+AIE++V K +SVELL R + +Q LI Y L +
Sbjct: 492 ICENSTVIELRI--LIETRIAIEKIVNGKKQSVELLSRNVNLRKLQHQLINFYNLRSRSF 549
Query: 602 GKEPDARLRILP 613
G+EP+ RLRI P
Sbjct: 550 GEEPNRRLRIFP 561
>gi|428200832|ref|YP_007079421.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
gi|427978264|gb|AFY75864.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
Length = 492
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/474 (50%), Positives = 323/474 (68%), Gaps = 29/474 (6%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHI 132
+L +LL + P ++R + +HP+ LIEVV+DLGR+P ARF ++ LSD +T I
Sbjct: 6 DLQKLLDIFPPQIRQILKQHPQRDNLIEVVLDLGRRPEARFLDERAEY-LSDTLVTREQI 64
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
++ +VG F DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G+ ++++DLV+ G
Sbjct: 65 DYCIDRVGRFGTDNRAGIEQTLHRISAIRNRNGGIIGLTCRVGRAVYGTIDMIRDLVETG 124
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+L +G PGVGKTT +REIARVLA+D KRV+IVDTS+EI G+GDIPHP IG ARRMQV
Sbjct: 125 KSILMLGRPGVGKTTALREIARVLADDLNKRVIIVDTSNEIAGDGDIPHPAIGRARRMQV 184
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ E+Q+KV+IEAVENHMPQ IVIDEIGT+LEA AA +IA+RG+QLV TAHG +IENLI
Sbjct: 185 ASPELQYKVMIEAVENHMPQAIVIDEIGTELEAYAARSIAERGVQLVGTAHGNSIENLIK 244
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP L L+GG+Q+VTLGDEEA RRG QKTV ERK P TF AVE++ + VH S+ T
Sbjct: 245 NPILCDLVGGIQSVTLGDEEARRRGSQKTVRERKAPPTFDIAVEMLERQRWVVHESVADT 304
Query: 373 VDAILSGRIPNVEIRRMQHDGS---KETVEKEFFAETSSDEEDEMMVEDAMEVTE----E 425
VD++L G P++++R M +G TV + S E ++V+E +
Sbjct: 305 VDSLLRGHQPHLQVRTMNGNGRVAITRTVPRVPVHRQSISYE-------LLDVSESNGWQ 357
Query: 426 RTGKIQFISEFPPNIGEDC--WEDGLL-----IRLYVYGILEATVVQLIKQLQMDDAVQL 478
+TG+ I FP D ++ L+ +RLY YGI ++ I+ L + + L
Sbjct: 358 KTGQ---IIPFPNVQFSDSVRYKLALMGKTAPLRLYAYGIGLHQLMSAIETLNL--PIVL 412
Query: 479 TDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALID 532
T I +ADA+LAL S L+KN+ + AK++ +PI+ KT+++ QIT+AL+ L D
Sbjct: 413 TRKIEKADAILALRSHLRKNADLPRIAKNYRVPIHTLKTNTISQITQALQQLSD 466
>gi|87124959|ref|ZP_01080806.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
gi|86167279|gb|EAQ68539.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
Length = 547
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/521 (44%), Positives = 326/521 (62%), Gaps = 13/521 (2%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+EVV+DLGR P AR+P +L + +T ++ ++G F DNRAGI RTLHRIS
Sbjct: 33 QLLEVVLDLGRVPEARYPGRSLALGERCLTREDLQSTVERLGQFGADNRAGIERTLHRIS 92
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+G ++GLTCRVGRAV G+ L++DL+ G SLL +G PGVGKTT +REIARVLA+
Sbjct: 93 AIRNRRGDVVGLTCRVGRAVFGTVALVRDLLDSGQSLLLMGRPGVGKTTALREIARVLAD 152
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+ +KRV+++DTS+EI G+GDIPHP IG ARRMQV E+QH+V+IEAVENHMP+VIVIDE
Sbjct: 153 ELEKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDE 212
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEA AA TIA+RG+ LVATAHG + NLI NP+L L+GG+++VTLGDEEA RR
Sbjct: 213 IGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTLGDEEARRRRS 272
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETV 398
QKTVLER TF AVE+ S+ VH + TVD +L G+ P + R + DGS + V
Sbjct: 273 QKTVLERAAEPTFPLAVEMHSRHRWAVHADVGRTVDLLLRGQTPRPQERSLAADGSVQLV 332
Query: 399 EKEFFAETSSDEEDEMMVEDAMEVTEERTGKI-----QFISEFPPNIGE-DCWEDGLLIR 452
E +S M + + P + ED L +
Sbjct: 333 ESPDPVIGASRPRARPMRQLRQAHAAAPQLAAVPTPDPVATSLPEAVDSVSPAEDAL--Q 390
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
+ G+ V + ++ + V+L D+++EAD +L++ L + G++ A+ +PI
Sbjct: 391 VLCCGLTPRLVEEASRRHRW--PVRLVDDLAEADVVLSVRQGLGRQPGLRRQAREARVPI 448
Query: 513 YATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
K +L Q+ +AL L+ G SED+ ++ + ALEE R+A+E+VV+P+G
Sbjct: 449 LVIKADTLPQVERALERLLSRRAGAEPPAVSEDQ---ADALAALEECRLAVERVVVPQGR 505
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VELLPR + +Q DL+ +Y+L G+ RLR+ P
Sbjct: 506 PVELLPRTEDVRRMQADLVARYRLRSDVFGRADQQRLRVFP 546
>gi|124023992|ref|YP_001018299.1| ATPase AAA [Prochlorococcus marinus str. MIT 9303]
gi|123964278|gb|ABM79034.1| AAA ATPase superfamily protein [Prochlorococcus marinus str. MIT
9303]
Length = 545
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/523 (43%), Positives = 328/523 (62%), Gaps = 19/523 (3%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+EVV+DLGR P AR+P +L + +T ++ ++G F DNRAGI RTLHRIS
Sbjct: 33 QLLEVVLDLGRVPEARYPGRALALGEQCLTRDDLQTTVDRLGQFGADNRAGIERTLHRIS 92
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+ ++GLTCRVGRAV G+ +++DL+ G SLL +G PGVGKTT +REIARVLA+
Sbjct: 93 AIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLAD 152
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
D ++RV+++DTS+EI G+GDIPHP IG ARRMQV E QH+V+IEAVENHMP+VIVIDE
Sbjct: 153 DLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDE 212
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEA AA TIA+RG+QLVATAHG + NLI NP+L L+GG+Q VTLGDEEA RR
Sbjct: 213 IGTELEAQAARTIAERGVQLVATAHGNALPNLIKNPTLSDLVGGIQAVTLGDEEARRRRT 272
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETV 398
QKTVLER TF AVEI ++ +H + ATVD +L G++P ++R + DGS V
Sbjct: 273 QKTVLERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQLRELDSDGSVRLV 332
Query: 399 EKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGI 458
+ + + S + + + + + ++ P D +++ GI
Sbjct: 333 DAQ---PSRSSSPRPALAAVPLPDPKAPSPRAAPPAQDPAEAISAERSDQRALQVLCCGI 389
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
V + I++ V+ D+++EAD +L++ L ++ A+ +P+ K+
Sbjct: 390 TPQLVDEAIRRHGW--PVRWVDDLNEADVVLSIRKGLGHQPTLRRQARESRVPVLVIKSD 447
Query: 519 SLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID--------ALEEARVAIEQVVIPK 570
+L Q+ +AL L+ G +D+++ SE D ALEE R+A+E+VV+P
Sbjct: 448 TLPQVERALERLLARRAG------PQDQLSHSESQDGDQEDALAALEECRLAVEKVVLPY 501
Query: 571 GESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
G VELLPR + +Q+DL+ +Y+L G+ RLR+ P
Sbjct: 502 GRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRLRVYP 544
>gi|113954993|ref|YP_729670.1| R3H domain-containing protein [Synechococcus sp. CC9311]
gi|113882344|gb|ABI47302.1| R3H domain protein [Synechococcus sp. CC9311]
Length = 548
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/549 (43%), Positives = 340/549 (61%), Gaps = 20/549 (3%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RL++LLP E++ ++ +L+EVV+DLGR P AR+ +L +T ++
Sbjct: 9 DLNRLVSLLPAELQSSLASTESRDQLLEVVLDLGRVPEARYSGWSTALGSTSVTHADLQA 68
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ G S
Sbjct: 69 MVERLGQFGSDNRAGIERTLHRISAIRNRRGEVVGLTCRVGRAVFGTVAMVRDLLDSGES 128
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+++DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 129 LLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVAR 188
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP
Sbjct: 189 PELQHQVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAHGNALSNLIKNP 248
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+++VTLGD+EA RR QKTVLER TFS AVE+ S++ V+ + VD
Sbjct: 249 TLCDLIGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEMHSRSRWAVYREVGRAVD 308
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVE------DAMEVTEERTG 428
A+L G++P+ E R+M DG VE + TS + D + + G
Sbjct: 309 ALLRGQLPSPEERKMASDGRVLRVEPQL--STSPLRRPSLAPVPLPSPLDPIPLQPVGMG 366
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
SE P+ + ++ G+ E + + ++ + D ++Q D++ +AD +
Sbjct: 367 G-STQSELKPSQAPSK-----MFQVLCCGLSEQRLDEAVR--RHDWSIQAVDDLVQADVV 418
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDK-- 546
L++ L + ++ A+ +PI K+ +L Q+ +AL L+ S D
Sbjct: 419 LSVRQGLGRQPELRRQAREAGVPILVIKSDTLPQVERALERLLMRRDSGLPHRDSADSGD 478
Query: 547 --INLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKE 604
+ S+ ALEE R+AIEQVV+P+G VELLPR + +Q DL+ +Y+L G
Sbjct: 479 GDGDQSDASAALEECRLAIEQVVVPQGRPVELLPRTEEVRQMQSDLVTRYRLRSDVYGTS 538
Query: 605 PDARLRILP 613
RLR+ P
Sbjct: 539 GQRRLRVFP 547
>gi|116072568|ref|ZP_01469834.1| ATPase [Synechococcus sp. BL107]
gi|116064455|gb|EAU70215.1| ATPase [Synechococcus sp. BL107]
Length = 550
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/530 (44%), Positives = 329/530 (62%), Gaps = 28/530 (5%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+EVV+DLGR P AR+P +L D IT + ++G F DNRAGI RTLHRIS
Sbjct: 33 QLLEVVLDLGRIPEARYPGRVSALGDRAITRDDLAVVVDKLGRFGADNRAGIERTLHRIS 92
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+G ++GLTCRVGRAV G+ +++DL+ SLL +G PGVGKTT +REIARVLA+
Sbjct: 93 AIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDSAKSLLLMGRPGVGKTTALREIARVLAD 152
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+ ++RV+++DTS+EI G+GDIPHP IG ARRMQV + E QH+V+IEAVENHMP+VIVIDE
Sbjct: 153 EMQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSSPERQHQVMIEAVENHMPEVIVIDE 212
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEAMAA TIA+RG+ LVATAHG + NLI NP+L L+GG+Q+VTLGD+EA RR
Sbjct: 213 IGTELEAMAARTIAERGVMLVATAHGNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRT 272
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETV 398
QKTVLER TF AVE+ S+ +H + ATVD +L G+ P VE R + +G
Sbjct: 273 QKTVLERAAEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQKPRVEQRELTSEGGMRRF 332
Query: 399 EKE---------FFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGL 449
E E + A SS + +E ++ + + P + ++
Sbjct: 333 EPEDLKGPLRRPYGAVASSLRSPRLGPS-----SEPKSPSLSPVDSPQPQLIDEAVRTSA 387
Query: 450 LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHD 509
L ++ GI V Q+I++ + +L D++ +AD +L++ L + S ++ AK
Sbjct: 388 L-QVLCCGITPQLVEQVIRRHRW--PARLVDDLCDADVVLSVRQGLGRASALRRQAKDQH 444
Query: 510 IPIYATKTSSLVQITKAL------RALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAI 563
+PI K +L QI +AL RA + DL D +++ LEE R+AI
Sbjct: 445 VPILVIKADTLPQIERALERLLSRRASAPEPNAVLVDLSGND-----DELAGLEECRLAI 499
Query: 564 EQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
EQVV+P+G VEL+PR + +Q +L+ +Y+L G+ RLR+ P
Sbjct: 500 EQVVMPQGRPVELVPRTERVRGLQAELVSRYRLRCDVFGQAEHGRLRVFP 549
>gi|260436547|ref|ZP_05790517.1| ATPase [Synechococcus sp. WH 8109]
gi|260414421|gb|EEX07717.1| ATPase [Synechococcus sp. WH 8109]
Length = 546
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/537 (43%), Positives = 332/537 (61%), Gaps = 21/537 (3%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGD 141
L PEE R +L+EVV+DLGR P AR+PS +L ++ + +++G
Sbjct: 25 LRPEEAR---------EQLLEVVLDLGRVPEARYPSRALALGSTPLSREDLTAVVARLGQ 75
Query: 142 FAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPP 201
F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ G SLL +G P
Sbjct: 76 FGGDNRAGIERTLHRISAIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRP 135
Query: 202 GVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKV 261
GVGKTT +REIARVLA++ ++RV+++DTS+EI G+GDIPHP IG ARRMQV E+QH+
Sbjct: 136 GVGKTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQT 195
Query: 262 LIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP+L L+G
Sbjct: 196 MIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAHGNALANLIKNPTLSDLVG 255
Query: 322 GVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRI 381
G+Q VTLGDEEA RR QKTVLER TF AVE+ S+ VH + ATVD +L G
Sbjct: 256 GIQAVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLK 315
Query: 382 PNVEIRRMQHDGSKETVEKE----FFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFP 437
P V+ R + +G + V+ S + V + + E P
Sbjct: 316 PRVQERELTPEGGVQLVDPPQASGLLRPPSQRSFADQPVSAPVPMPAASARGASAAEEPP 375
Query: 438 PNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
P E E +++ G+ V + I+ ++ +++SEAD +L++ L +
Sbjct: 376 PL--ETSAEH---LQVLCCGVQPRVVEEAIRSHGWK--ARVVEDLSEADVVLSVRLGLSR 428
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGE-FKDLRSEDKINLSEKIDAL 556
++ + IPI K+ +L Q+T+A+ L+ E ++ D+ + +++ AL
Sbjct: 429 QPSLRRQVRDLGIPILVIKSDTLPQVTRAMARLLRRQATETAAEVTPPDRASQDDELAAL 488
Query: 557 EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
EE R+A+EQVV+P+G VELLPR +L +Q DL+R+Y+L G+ +RLR+ P
Sbjct: 489 EECRLAVEQVVMPQGRPVELLPRSERVLRMQADLVRRYRLRSDVFGEAEMSRLRVFP 545
>gi|219849802|ref|YP_002464235.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aggregans DSM 9485]
gi|219544061|gb|ACL25799.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aggregans DSM 9485]
Length = 540
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/564 (43%), Positives = 348/564 (61%), Gaps = 42/564 (7%)
Query: 64 VSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLS 123
V+ +VND I+L LLA LP +R + + + L+E+VMDLGR P AR+ + LS
Sbjct: 3 VTDTVND---IQL--LLATLPPAIRDAIQKANDQDNLLEIVMDLGRLPEARYRGHELFLS 57
Query: 124 DCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN 183
D ++T I + +++G+F DNRAGI RTLHRIS IRNR+G +IGLTCRVGRAV G+ +
Sbjct: 58 DREVTAEDINYVIARIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVD 117
Query: 184 LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPG 243
+++DLV+ G S+L +G PG GKTT++RE ARVL ++ +KRV+IVDTS+EI G+GDIPHPG
Sbjct: 118 IIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPG 177
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
IG ARRMQVP QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QL+ TAH
Sbjct: 178 IGRARRMQVPRPSEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAH 237
Query: 304 GVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
G T++NL++NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TFS VEI S +
Sbjct: 238 GNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDSV 297
Query: 364 RVHHSLEATVDAILSGRIPNVEIRRMQHDGS--KETVEKEF-------FAETSSDEEDEM 414
V+ + A VDAIL G P E R + DG+ +E V + F + E
Sbjct: 298 TVYPDVAAAVDAILRGEEPPCEQRIREPDGTVRREPVRRALIDAPAFGFRRSRGGREQSQ 357
Query: 415 MVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDD 474
M + + + ++ PP R++ +G+ + I++L++
Sbjct: 358 MGTNGPRLRDRNGSMTGSVTTVPPQ------------RIFPFGVSRNRLQNAIERLRV-P 404
Query: 475 AVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITK------ALR 528
AV + D + +A ++ L + +++S A+ +P+Y + +++ Q+ + LR
Sbjct: 405 AVIVRD-LKDATLVMTLKNYYRQSSHQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLR 463
Query: 529 ALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQI 588
+ DD E + RS+ I +AL E AI QV+ + +VEL PR SYI +Q
Sbjct: 464 EMFDD---EAEYSRSDSVIE-----EALLETEQAIAQVINGERNAVELTPRSSYIRRLQH 515
Query: 589 DLIRKYQLHYQRVGKEPDARLRIL 612
+ +Y L + G +P+ R++I
Sbjct: 516 QMADRYNLRSESRGDDPNRRVKIF 539
>gi|318042567|ref|ZP_07974523.1| ATPase [Synechococcus sp. CB0101]
Length = 556
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/558 (43%), Positives = 329/558 (58%), Gaps = 25/558 (4%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D RLL +LPE +R ++ +L+EVV+DLGR P AR+P L D +
Sbjct: 11 ITDDLD----RLLEVLPEAVRQALAPPEAREQLLEVVLDLGRVPEARYPGRAVGLGDAVV 66
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ Q+G F DNRAGI RTLHRISAIRNR G I+GLTCRVGRAV G+ +++D
Sbjct: 67 ERADLAAVVEQLGAFGGDNRAGIERTLHRISAIRNRTGTIVGLTCRVGRAVFGTVAMVRD 126
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L+ G SLL +G PGVGKTT +REIARVLA++ KRV+++DTS+EI G+GDIPHP IG A
Sbjct: 127 LMDSGQSLLLMGRPGVGKTTALREIARVLADELGKRVVVIDTSNEIAGDGDIPHPAIGRA 186
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG +
Sbjct: 187 RRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNEL 246
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
NL+ NP+L L+GG+++VTLGDEEA RR QKTVLER TF AVE+ ++ VH
Sbjct: 247 ANLVKNPTLSDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHTRNRWLVHR 306
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ TVD +L G++P ++R + DG + S + + E A
Sbjct: 307 DVARTVDLLLRGQLPRPQVRELDGDG-------RLHLQEPSPPQALIRPEPAQGGRPPLP 359
Query: 428 GKIQFISEFP---------PNIGEDCWEDGL---LIRLYVYGILEATVVQLIKQLQMDDA 475
+ + ++ P P D + G + LY G+ + Q I+ ++
Sbjct: 360 RRPRDLAPVPLPDPVAAPEPEPAPDEAQAGAPQSPLLLYGVGVSALLLEQAIRSRRL--P 417
Query: 476 VQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHT 535
VQ + + EAD +LAL L + ++ A+ +PI K +L Q+ + L L+
Sbjct: 418 VQCVETVEEADVVLALRQHLGQQPELRRRAQQAGVPILVIKADTLPQVQRGLERLLQRRE 477
Query: 536 GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQ 595
+ + + ALEE R+A+EQ+V+ KG+ VELLPR + +Q +L +YQ
Sbjct: 478 PAEPPQAEPGRSGADDDLAALEECRLAVEQLVLAKGQPVELLPRSERVRRLQAELAARYQ 537
Query: 596 LHYQRVGKEPDARLRILP 613
L G RLRI P
Sbjct: 538 LATADFGSGRQQRLRIFP 555
>gi|78185517|ref|YP_377952.1| ATPase [Synechococcus sp. CC9902]
gi|78169811|gb|ABB26908.1| ATPase [Synechococcus sp. CC9902]
Length = 539
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/532 (43%), Positives = 328/532 (61%), Gaps = 13/532 (2%)
Query: 84 PEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
P+ +++ +S +L+EVV+DLGR P AR+P +L D IT + ++G F
Sbjct: 18 PQSVQVALSLEASHDQLLEVVLDLGRIPEARYPGRASALGDRAITRDDLADVVDKLGRFG 77
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ SLL +G PGV
Sbjct: 78 ADNRAGIERTLHRISAIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDSAQSLLLMGRPGV 137
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKTT +REIARVLA++ ++RV+++DTS+EI G+GDIPHP IG ARRMQV + E QH+V+I
Sbjct: 138 GKTTALREIARVLADEMQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSSPEQQHQVMI 197
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGV 323
EAVENHMP+VIVIDEIGT+LEAMAA TIA+RG+ LVATAHG + NLI NP+L L+GG+
Sbjct: 198 EAVENHMPEVIVIDEIGTELEAMAARTIAERGVMLVATAHGNALANLIKNPTLSDLVGGI 257
Query: 324 QNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPN 383
Q+VTLGD+EA RR QKTVLER TF AVE+ S+ +H + ATVD +L G+ P
Sbjct: 258 QSVTLGDDEARRRRTQKTVLERAAEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQQPR 317
Query: 384 VEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGED 443
VE R + +G E E + ++ V + P D
Sbjct: 318 VEQRELTSEGGMRRFEPEDLKGP--------VRRPSLAVASSPIPPSLSPLDSPNCQPGD 369
Query: 444 CWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQA 503
+++ GI V Q I++ + +L D++ +AD +L++ L + S ++
Sbjct: 370 EAVRTSALQVLCCGITPQLVEQAIRRHRW--PARLVDDLCDADVVLSVRQGLGRVSALRR 427
Query: 504 AAKSHDIPIYATKTSSLVQITKALRALID--DHTGEFKDLRSEDKINLSEKIDALEEARV 561
AK +PI K +L QI +AL L+ D + +R E +++ LEE R+
Sbjct: 428 QAKDQHVPILVIKADTLPQIERALERLLSRRDSAPDPSSIRVELS-GYDDELAGLEECRL 486
Query: 562 AIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
AIEQVV+P+G VEL+PR + +Q +L+ +Y+L G+ RLR+ P
Sbjct: 487 AIEQVVMPQGRPVELVPRTERVRGMQAELVNRYRLRCDVFGQAEHCRLRVFP 538
>gi|116075770|ref|ZP_01473029.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
gi|116067085|gb|EAU72840.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
Length = 560
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/539 (43%), Positives = 324/539 (60%), Gaps = 38/539 (7%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+EVV+DLGR P AR+P L D ++ + ++G F DNRAGI RTLHRIS
Sbjct: 35 QLLEVVLDLGRVPEARYPGRSMPLGDICLSREELLATVERLGQFGADNRAGIERTLHRIS 94
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+G ++GLTCRVGRAV G+ +++DL+ G SLL +G PGVGKTT +REIARVLA+
Sbjct: 95 AIRNRRGDVVGLTCRVGRAVFGTVAIVRDLLDSGESLLLMGRPGVGKTTALREIARVLAD 154
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+ KRV+++DTS+EI G+GDIPHP IG ARRMQV E+QH+V+IEAVENHMP+VIVIDE
Sbjct: 155 ELGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDE 214
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEA AA TIA+RG+ LVATAHG + NLI NP+L L+GG+++VTLGDEEA RR
Sbjct: 215 IGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTLGDEEARRRRS 274
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETV 398
QKTVLER TF AVE+ + VH + ATVD +L G P ++R + DG V
Sbjct: 275 QKTVLERAAEPTFPLAVEMHQRHRWAVHPDVGATVDLLLRGHAPRAQLRELSPDGQVRLV 334
Query: 399 E------------------------KEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
E K A S + V + + E +Q
Sbjct: 335 EIEPAGTGPRRPQTPPSPSPGLLRDKPVLAVVPSPDPAADPVGSDLSLAEGEAVSLQ--- 391
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
+ GE DGL ++ G+ V + + + D V+L + + +AD +L++
Sbjct: 392 ----DDGEGAEFDGL--QVLCCGLTPRLVEEATR--RHDWPVRLVEELEQADVVLSVRQG 443
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+ + G++ A+ +PI K+ +L Q+ +AL L+ + SED+ ++
Sbjct: 444 MGQQPGLRRQAREARVPILVIKSDTLAQVERALERLLARRADQTPPASSEDR---ADAFA 500
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ALEE R+A+EQVV+P G VELLPR + +Q DL+ +Y+L G+ RLR+ P
Sbjct: 501 ALEECRLAVEQVVVPLGRPVELLPRTEEVRRMQADLVERYRLRSDVFGQADQRRLRVFP 559
>gi|309792154|ref|ZP_07686626.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG-6]
gi|308225695|gb|EFO79451.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG6]
Length = 552
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/522 (45%), Positives = 332/522 (63%), Gaps = 15/522 (2%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+E+VMDLGR P AR+ + + LSD ++T I++ ++G F DNRAGI RTLHRIS
Sbjct: 35 DLLEIVMDLGRLPEARYRNEERFLSDREVTQDEIDYVIERIGVFGEDNRAGIPRTLHRIS 94
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+G +IGLTCRVGRA+ G+ +++DLV+ G S+L +G PG GKTT++RE ARVLA
Sbjct: 95 AIRNRRGTVIGLTCRVGRAIFGTVTIIRDLVETGKSILLLGKPGTGKTTLLRETARVLAE 154
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+++KRV+IVDTS+EI G+GDIPHPGIG ARRMQVP QH V+IEAVENHMP+VIVIDE
Sbjct: 155 EFRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHAVMIEAVENHMPEVIVIDE 214
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEAMAA TIA+RG+QLV TAHG T++NL++NP+L L+GG+Q VTLGDEEA RRG
Sbjct: 215 IGTELEAMAARTIAERGVQLVGTAHGNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGT 274
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDG--SKE 396
QKTVLERK P TF +EI S + V+ + A VDAIL G P E+R DG E
Sbjct: 275 QKTVLERKAPPTFDILIEIESWDSVTVYDDVAAAVDAILRGEDPPAELRSRDADGVVHVE 334
Query: 397 TVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVY 456
TV++E + +G +F +G R++ +
Sbjct: 335 TVQRELINAPALGRRILPTRGGGERGASSGSGSERFAGPRRERGAAASSANGPTQRIFPF 394
Query: 457 GILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATK 516
G+ + I++L++ AV + D + +A ++ L + ++++ A+ H +P+Y +
Sbjct: 395 GVSRNRLETAIERLRV-PAVIVRD-MKDATLVMTLKNYYRQSAQRLKQAEEHGVPVYVLR 452
Query: 517 TSSLVQITKA------LRALIDDHTGEFKDLRSEDKINLSEKI-DALEEARVAIEQVVIP 569
+++ Q+ + LR +D GE ++ RS N SE I DA+ E AI QV+
Sbjct: 453 NNTITQMERQLAQVFNLRLAEEDERGEGENRRS----NGSEVIEDAMVELENAINQVMSG 508
Query: 570 KGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
+ +VEL PR SYI +Q + +Y L + G +P+ R++I
Sbjct: 509 ERNAVELAPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKI 550
>gi|33863996|ref|NP_895556.1| ATPase AAA [Prochlorococcus marinus str. MIT 9313]
gi|33635580|emb|CAE21904.1| AAA ATPase superfamily [Prochlorococcus marinus str. MIT 9313]
Length = 545
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/523 (44%), Positives = 324/523 (61%), Gaps = 19/523 (3%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS 158
+L+EVV+DLGR P AR+P +L + +T ++ ++G F DNRAGI RTLHRIS
Sbjct: 33 QLLEVVLDLGRVPEARYPGRALALGEQCLTRDDLQTTVDRLGQFGADNRAGIERTLHRIS 92
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
AIRNR+ ++GLTCRVGRAV G+ +++DL+ G SLL +G PGVGKTT +REIARVLA+
Sbjct: 93 AIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLAD 152
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
D ++RV+++DTS+EI G+GDIPHP IG ARRMQV E QH+V+IEAVENHMP+VIVIDE
Sbjct: 153 DLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDE 212
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IGT+LEA AA TIA+RG+QLVATAHG + NLI NP+L L+GG+Q VTLGDEEA RR
Sbjct: 213 IGTELEAQAARTIAERGVQLVATAHGNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRT 272
Query: 339 QKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETV 398
QKTVLER TF AVE+ ++ +H + ATVD +L G++P ++R + DGS V
Sbjct: 273 QKTVLERAAEPTFPVAVEMNTRNRWSIHADVAATVDQLLRGQLPRPQLRELGSDGSVRLV 332
Query: 399 EKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGI 458
+ + SS + + + I + D +++ GI
Sbjct: 333 DAQ--PSRSSSPRPALAAVPLPDPQAPSPRAAPPAQDHAEAISAE-RADHRALQVLCCGI 389
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
V + I++ V+ D++ EAD +L++ L ++ A+ +P+ K+
Sbjct: 390 TPQLVDEAIRRHGW--PVRWVDDLHEADVVLSIRKGLGHQPTLRRQARESRVPVLVIKSD 447
Query: 519 SLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID--------ALEEARVAIEQVVIPK 570
+L Q+ +AL L+ G +D+I+ SE D ALEE R+A+E+VV+P
Sbjct: 448 TLPQVERALERLLARRAG------PQDQISHSESQDGDQEDALAALEECRLAVEKVVLPY 501
Query: 571 GESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
G VELLPR + +Q+DL+ +Y+L G+ RLR+ P
Sbjct: 502 GRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRLRVYP 544
>gi|374249429|ref|YP_005088648.1| ycf45 gene product [Phaeocystis antarctica]
gi|340008120|gb|AEK26752.1| Ycf45 [Phaeocystis antarctica]
Length = 551
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/547 (42%), Positives = 353/547 (64%), Gaps = 12/547 (2%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L +LL ++P+ ++ + HP+ LIE+V+D+GR+P ARF LS + +++
Sbjct: 7 LNQLLEIVPDFIQGPLKHHPKREILIEIVLDIGRRPEARFADSTEYLSYRTVVWQDLDYI 66
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
++G F+ DNRAGI +TLHRIS++RNR+G IIGLTCR+GRAV G+ ++++DL+++ S+
Sbjct: 67 IKRLGKFSDDNRAGIEKTLHRISSLRNRQGNIIGLTCRIGRAVFGTVSIIRDLLENKKSI 126
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT IREIARVL++ KKRV+I+DTS+EI G+GD+PHP IG ARRMQV ++
Sbjct: 127 LLLGKPGVGKTTAIREIARVLSDGMKKRVIIIDTSNEIAGDGDLPHPSIGKARRMQVSST 186
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ QH+++IEAVENHMP++I+IDEIGT+LEA AA TIA+RG+QL+ TAHG +ENLI NP+
Sbjct: 187 KNQHEIMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLIGTAHGNALENLIKNPT 246
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
+ LIGG+Q VTLGDEEA RRG K++LERK P TF AVEI +H ++ +VD
Sbjct: 247 ITDLIGGIQYVTLGDEEAKRRGSAKSILERKTPPTFDIAVEIHDSQTWVIHDNIGNSVDL 306
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS- 434
+L G+ P ++ R + G + E + + + + ++++ + ++
Sbjct: 307 LLRGQNPLLQKRNLT-SGQDVNIHCEISYNKNEPHKTHHLKSNIPVKKQKKSILLNGVNL 365
Query: 435 -EFPPNIGEDCWEDGLL---IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLA 490
E D + LL + LY YGI + +I+ L++ + +T I ADA+LA
Sbjct: 366 KENQKFKKLDNESNTLLTKSVNLYTYGINTQELNAIIQTLRL--PIVITKEIQYADAILA 423
Query: 491 LHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDH----TGEFKDLRSEDK 546
L + +K N ++ + S IY + SL++I KAL+ L + + T + + +R +
Sbjct: 424 LENLVKNNRRLKQISYSRKTTIYTIQRHSLLEIVKALQRLDNKYDTFPTIKRQTIRKAAR 483
Query: 547 INLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPD 606
I E + LEE R++IE+++IP + ++LLPR S + +Q DL++ YQL+ VG + +
Sbjct: 484 IIDKELLTPLEETRLSIEEIIIPNHKILDLLPRTSSVRKLQHDLVKHYQLNSTNVGNKLN 543
Query: 607 ARLRILP 613
R+RI P
Sbjct: 544 RRVRIYP 550
>gi|148657339|ref|YP_001277544.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus sp. RS-1]
gi|148569449|gb|ABQ91594.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus sp. RS-1]
Length = 538
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/549 (43%), Positives = 337/549 (61%), Gaps = 16/549 (2%)
Query: 67 SVNDDFDIELGRLLALLPEEMRIRVSEHPELYE-LIEVVMDLGRKPLARFPSGDFSLSDC 125
+V D + LLA LP +R + P+ E L+EV+MDLGR P AR+ + + LSD
Sbjct: 2 AVQQDITSNIELLLATLPAPIRQAIETGPDDREDLLEVIMDLGRLPEARYRNHERFLSDR 61
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
++T I++ ++G F DNRAGI RTLHRISAIRNR G +IGLTCRVGRAV G+ +L
Sbjct: 62 EVTQEDIDYVIGRIGAFGEDNRAGIPRTLHRISAIRNRTGRVIGLTCRVGRAVFGTITIL 121
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
+DL++ G S+L +G PGVGKTT++RE ARVLA D +KRV+IVDTS+EI G+GDIPHPGIG
Sbjct: 122 RDLIESGKSVLLLGRPGVGKTTMLRETARVLAEDLRKRVVIVDTSNEIAGDGDIPHPGIG 181
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
ARRMQVP QH V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG
Sbjct: 182 RARRMQVPRPSEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGQ 241
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
T+ENL+ NP+L LIGG+Q VTLGDEEA RRG QKTVLERK P TF VEI + ++ V
Sbjct: 242 TLENLLSNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQVTV 301
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE 425
+ + + VD++L P E+RR DG E E F + + + E
Sbjct: 302 YPDVASAVDSLLRSEPPQAEVRRRTADG-----EIEVFPAFTGEHAVPSIPGIRRGGGRE 356
Query: 426 RTGKIQFISEFPP--NIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNIS 483
R + +S P ++G R+Y +G+ + + I L + + ++
Sbjct: 357 RGERSPRVSSAPAASSVGMTPQ------RIYPFGVSRDRLERAIASLHV--PATIVRDMG 408
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRS 543
EA ++ L + ++ S A+ +P+Y + ++L Q+ + L + + + R
Sbjct: 409 EATMVMTLKNYYRQGSQRVRQAEERGVPVYVLRNNTLAQMERQLADVFNISLSDNGLQRR 468
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
D+ + + +AL E AI QV+ + SVEL P+ SY+ +Q + +Y L + G+
Sbjct: 469 ADRDDDATMTEALLEVETAITQVLNGERSSVELQPQSSYVRRLQHQMAERYNLQSESRGR 528
Query: 604 EPDARLRIL 612
EP+ R++I
Sbjct: 529 EPNRRVKIF 537
>gi|300087975|ref|YP_003758497.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527708|gb|ADJ26176.1| single-stranded nucleic acid binding R3H domain protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 512
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 338/550 (61%), Gaps = 44/550 (8%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD I LL +LP E+R +++ +L LIEVV+DLGR P ARF + L +
Sbjct: 5 ITDDLSI----LLDILPPEIREPLNQQEDLQHLIEVVIDLGRPPEARFLRREIVLRAEES 60
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ IE+ +++G F DNRAGI RTLHRISAIRNRKG +IGLT RVGRAV G+ ++ D
Sbjct: 61 SESDIEYVVNRIGQFGEDNRAGIERTLHRISAIRNRKGRVIGLTVRVGRAVYGTIKIIDD 120
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L+Q G S+L +G PGVGKTT++RE ARVLA+D +KRV+IVDTS+EI G+GDIPHP IG A
Sbjct: 121 LIQSGQSVLLMGRPGVGKTTMLRETARVLADDLRKRVVIVDTSNEIAGDGDIPHPAIGRA 180
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV + E QH V+IEAVENHMP+V+VIDEIGT+LEA AA TIA+RG+QLV TAHG T+
Sbjct: 181 RRMQVKSPERQHAVMIEAVENHMPEVVVIDEIGTELEAQAARTIAERGVQLVGTAHGNTL 240
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
NL+ NP+L LIGG+Q VTLGDEEA RRG QKTVLERK P TF+ VEI + ++ VH
Sbjct: 241 ANLMQNPTLADLIGGIQAVTLGDEEARRRGTQKTVLERKSPPTFNVVVEIQERDQVAVHP 300
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
++ TVDAIL G P EIR + DG + F + + E+A E +
Sbjct: 301 NVSVTVDAILRGLHPETEIRSLGDDGQV----RSQFIQLEAHPHHSCTGEEASESS---- 352
Query: 428 GKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADA 487
+++ P LY++GI + Q ++L + ++ +T+ + +AD
Sbjct: 353 -----MTDSPV--------------LYLFGINRHRLEQAAQELGI--SLHITERLGDADI 391
Query: 488 LLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI 547
L+ + ++ A++ DIP+Y K+ + Q + L G F + +
Sbjct: 392 LVTSRTYFRRRPQKVRDAENRDIPVYVMKSHTPAQFRQLL--------GIFTSQKWPSQP 443
Query: 548 NLSEKIDALEEARVAIEQVVIPKG-ESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPD 606
S A+EEAR+A++QV G E VEL P+ +YI +Q L+ + +LH G P+
Sbjct: 444 TESPMTTAMEEARIAVDQV--HSGIEKVELSPQSAYIRRLQHMLVERNKLHSDSQGSGPE 501
Query: 607 ARLRILPFQT 616
R+ I +T
Sbjct: 502 RRVSIYKNET 511
>gi|148238773|ref|YP_001224160.1| ATPase [Synechococcus sp. WH 7803]
gi|147847312|emb|CAK22863.1| AAA ATPase superfamily protein with a possible REH domain
[Synechococcus sp. WH 7803]
Length = 545
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/544 (43%), Positives = 334/544 (61%), Gaps = 13/544 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL+LLP +R + ++ + +L+EVV+DLGR P AR+P L D + +E
Sbjct: 9 DLQRLLSLLPTPVRKVLEQNEQSDQLLEVVLDLGRLPEARYPGRSQPLGDRCLERSDLEE 68
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ S
Sbjct: 69 MVDRLGQFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAMVRDLLDSEQS 128
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+D KRV+++DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 129 LLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVAR 188
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP
Sbjct: 189 PELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALANLIKNP 248
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+++VTLGDEEA RR QKTVLER TF A+E+ S+ VH + TVD
Sbjct: 249 TLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTVD 308
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L G+ P + R + DG V+ + ++ + M ++
Sbjct: 309 LLLRGQTPRPQERELTEDGGVRLVDAVAPQSLRAPQKRPALAVVPMPDPVAEPVRVSASK 368
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
+ G D +++ G+ + + ++ + VQ D++S AD LL++
Sbjct: 369 DAEKTEGRDPE----TLQILCCGLSRQRLEEAVRCHRW--PVQAVDDLSAADVLLSVRQG 422
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSE--- 551
L + ++ A+ +PI K+ SL Q+ +AL L+ + + +S ++ +E
Sbjct: 423 LGRQPELRRQAREAGVPILVIKSDSLPQVERALERLLSRRS--RPETQSLPPVSAAEPAR 480
Query: 552 --KIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARL 609
+ ALEE R+A+E+VV+P+G VELLPR +L +Q DL+ +Y L G RL
Sbjct: 481 GDALAALEECRLAVERVVMPEGRPVELLPRSEVVLQMQADLVARYSLRSDVYGPSDQRRL 540
Query: 610 RILP 613
R+ P
Sbjct: 541 RVFP 544
>gi|71842246|ref|YP_277334.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|60101489|gb|AAX13833.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|336286160|gb|AEI29496.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
Length = 558
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/562 (42%), Positives = 346/562 (61%), Gaps = 30/562 (5%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L +LL +LPE + + +LIE+V+D+GR+P ARF +G LS I +E+
Sbjct: 7 LNQLLDILPEFISKPLRTTEMRTQLIEIVLDIGRRPEARFATGTKYLSYKTIVWQDLEYV 66
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
++G F+ DNRAGI +TLHR+SA+RNR G +IGLTCR+GRA+ G+ N++ DL++ S+
Sbjct: 67 LKRLGKFSGDNRAGIEKTLHRVSALRNRNGGVIGLTCRIGRAIFGTVNIICDLLEKRKSI 126
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT IREIARVL++D KRV+I+DTS+EI G+GD+PHP IG ARRMQV N
Sbjct: 127 LLLGRPGVGKTTAIREIARVLSDDMNKRVIIIDTSNEIAGDGDLPHPSIGKARRMQVRNP 186
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ QH+V+IEAVENHMP++I+IDEIGT+LEA AA TIA+RG+QLV TAHG ++NLI NP+
Sbjct: 187 QNQHQVMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLVGTAHGSALDNLIKNPT 246
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L LIGG+Q VTLGDEEA RRG K++LERK P TF AVEI + +H ++E +VD
Sbjct: 247 LTDLIGGIQYVTLGDEEARRRGSSKSILERKAPPTFEIAVEIHNVKTWVIHDNIERSVDL 306
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISE 435
+L G+ N+ +++ + + K ++ ++E +E++ T K +
Sbjct: 307 LLQGQ--NLALQKRELSPFDRGIVKCSLTHSNKEDESLYGIENSSNFTNPGYKKSK---T 361
Query: 436 FPPNIGEDCW---------------EDG-LLIRLYVYGILEATVVQLIKQLQMDDAVQLT 479
P +G D + E G I LYVYGI + LIK L D + +T
Sbjct: 362 NPSQLGRDEYVKSKKSNKNNSLVKKELGERFIFLYVYGINSQDLCSLIKTL--DLPIIVT 419
Query: 480 DNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI--DDHTGE 537
+ AD +LAL + +K N ++ + S +I I +SL+QI KAL+ ++ + E
Sbjct: 420 REVQYADNVLALGNLIKNNKKLRQISSSRNINISTIPNNSLLQIAKALKQIVIRNSSGSE 479
Query: 538 FKDLRSEDKINLS--EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQ 595
FK+ +D+I + + LEE + I++++ K ++ LLPR + +Q LI YQ
Sbjct: 480 FKN---DDRIKRASGQLFSPLEETQFLIDEIIQSKKRAINLLPRSREVRKLQHQLISHYQ 536
Query: 596 LHYQRVGKEPDARLRILPFQTR 617
L VG EP +R+ P R
Sbjct: 537 LKSISVGVEPHRYVRLFPSGIR 558
>gi|390559754|ref|ZP_10244042.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390173675|emb|CCF83341.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 563
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/519 (45%), Positives = 335/519 (64%), Gaps = 18/519 (3%)
Query: 100 LIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISA 159
LIE+VMDLGR+P ARF + LS+ ++T H+ ++G F DNRAGI RTLHRISA
Sbjct: 51 LIEIVMDLGRRPEARFHDHETYLSEEEVTREHLAFVAERIGQFGDDNRAGIERTLHRISA 110
Query: 160 IRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAND 219
IR+R G I+GLTCR+GRAV G+ +++DLV+ G S+L +G PGVGKTT++RE ARVLA+D
Sbjct: 111 IRSRSGDIVGLTCRIGRAVYGTIGIIRDLVESGESILLLGRPGVGKTTMLRETARVLADD 170
Query: 220 YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
+KRV+IVDTS+EI G+GDIPHP IG ARRMQVP+ +QH V+IEA+ENHMP+VIVIDEI
Sbjct: 171 LRKRVVIVDTSNEIAGDGDIPHPSIGRARRMQVPSPSLQHAVMIEAIENHMPEVIVIDEI 230
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQ 339
GT+LEA AA TIA+RG+QLV TAHG T+ENL+MNP+L LIGG+Q+VTL DEEA RRG Q
Sbjct: 231 GTELEAAAARTIAERGVQLVGTAHGNTLENLMMNPTLSDLIGGIQSVTLSDEEARRRGTQ 290
Query: 340 KTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGS-KETV 398
K++LERK P TF+ VEI ++ + VH + A+VD+IL GR VEIR+ DG T+
Sbjct: 291 KSILERKAPPTFTVMVEIQARDRVAVHRDVAASVDSILRGRPLQVEIRQRGADGEVTVTL 350
Query: 399 EKEFFAETSSDEEDEMMVEDAMEVTEERTGK---IQFISEFPPNIGEDCWEDGLLIRLYV 455
E+ + A E + + VT+ R + Q P G G R++
Sbjct: 351 EQPYLAPERVAESGK-----SRGVTQPRPVQHDGAQPRPAMPLPAGRAT--PGKPARIFP 403
Query: 456 YGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYAT 515
+G+ + Q I Q+ + V + ++ EADA++ L + ++ A+ +PIY
Sbjct: 404 FGVSRNRLEQAIHQMGL--PVTIVRDLREADAVITLKNYYRRRPQQLREAEERGVPIYVV 461
Query: 516 KTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKI--DALEEARVAIEQVVIPKGES 573
+++++VQ+ +R+L + + +++ +SE + A+ EA AI ++ +S
Sbjct: 462 RSNTIVQMNNLMRSLFGESVVAAQG--DDERAGISEDLIAAAMFEAETAIHD-IMDGADS 518
Query: 574 VELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRIL 612
VEL P+ S + +Q +L +Y L + G+EP+ + I
Sbjct: 519 VELQPQSSRVRRLQHELAERYNLISRSRGREPNRHVEIF 557
>gi|78211931|ref|YP_380710.1| ATPase [Synechococcus sp. CC9605]
gi|78196390|gb|ABB34155.1| ATPase [Synechococcus sp. CC9605]
Length = 546
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/537 (43%), Positives = 335/537 (62%), Gaps = 16/537 (2%)
Query: 84 PEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
PE +R ++ +L+EVV+DLGR P AR+P +L ++ + +++G F
Sbjct: 18 PEAVREQLRPVEARQQLLEVVLDLGRVPEARYPGRALALGSTPLSREDLAVVVARLGQFG 77
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ G SLL +G PGV
Sbjct: 78 GDNRAGIERTLHRISAIRNRQGDVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRPGV 137
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKTT +REIARVLA++ ++RV+++DTS+EI G+GDIPHP IG ARRMQV E+QH+ +I
Sbjct: 138 GKTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQTMI 197
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGV 323
EAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP+L L+GG+
Sbjct: 198 EAVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAHGNALANLIKNPTLSDLVGGI 257
Query: 324 QNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPN 383
Q VTLGDEEA RR QKTVLER TF AVE+ S+ VH + ATVD +L G P
Sbjct: 258 QAVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLKPR 317
Query: 384 VEIRRMQHDGSKETVEKEFFA------ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFP 437
V+ R + +G + V+ + S + + V M +R + +
Sbjct: 318 VQERELTPEGGVQLVDPPQSSGLLRPPSQRSFADQPVSVPVPMPAASDR----EVSAAEK 373
Query: 438 PNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
P E E +++ G+ V + I+ ++ +++SEAD +L++ L +
Sbjct: 374 PASPETSAEH---LQVLCCGVPPRVVEEAIRSHGWK--ARVVEDLSEADVVLSVRLGLSR 428
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGE-FKDLRSEDKINLSEKIDAL 556
++ + IPI K+ +L Q+T+A+ L+ E ++ D+ + +++ AL
Sbjct: 429 QPSLRRQVRDLGIPILVIKSDTLPQVTRAMARLLRRQATETAPEVTPPDQASQDDELAAL 488
Query: 557 EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
EE R+A+EQVV+P+G VELLPR +L +Q DL+R+Y+L G+ +RLR+ P
Sbjct: 489 EECRLAVEQVVMPQGRPVELLPRSERVLRMQADLVRRYRLRSDVFGEAEMSRLRVFP 545
>gi|217967175|ref|YP_002352681.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dictyoglomus turgidum DSM 6724]
gi|217336274|gb|ACK42067.1| single-stranded nucleic acid binding R3H domain protein
[Dictyoglomus turgidum DSM 6724]
Length = 515
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/555 (44%), Positives = 342/555 (61%), Gaps = 46/555 (8%)
Query: 62 SRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS 121
+++ + DD D + LA+ P +++ R+ + P++ +LIEVV+DLGR+ ARF
Sbjct: 2 NKLLQQIVDDLD----KFLAIFPNDIKNRLEQDPDIKDLIEVVLDLGREIEARFYKKTVI 57
Query: 122 LSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
T + + ++VG+F+ D RAGI RTLHRISAI NR G IIGLTCRVGRAV G+
Sbjct: 58 FEGRFTTEEDLNYIIARVGEFSGDKRAGIERTLHRISAIENRHGRIIGLTCRVGRAVLGT 117
Query: 182 ANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPH 241
++++D+++ G ++L +G PGVGKTT++RE ARVLA++ KRV+I+DTS+EIGG+GDIPH
Sbjct: 118 VDIIRDVIETGKNILLLGKPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPH 177
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
P IG ARRMQVPN QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QL+ T
Sbjct: 178 PAIGRARRMQVPNPSKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGT 237
Query: 302 AHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKT 361
AHG+T++NL++NP+L L+GG+Q VTL DEEA RRG QKTVLERK P TF +EI +
Sbjct: 238 AHGITLQNLLLNPTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERD 297
Query: 362 ELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAME 421
L +HH + TVDA+L G I EIR +G + VE +EE + E
Sbjct: 298 RLAIHHDVAKTVDALLRGYIIKPEIRVRTPEGEVKKVEAPTIEPVEEEEEVSVF--GKPE 355
Query: 422 VTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDN 481
E+RT +R++ YGI + + I+ L + V N
Sbjct: 356 KIEKRTEP---------------------LRIFPYGISRNRLEKAIRNLGVPAFV--VKN 392
Query: 482 ISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDL 541
+SEA+ LL L + K+ + A+ I I +++++ QI + L + EF
Sbjct: 393 LSEANCLLILKAHQKRAKDLLKEAEKKGIKIAVLRSNTVTQIERFL-------SEEF--- 442
Query: 542 RSEDKINLSEKIDALEEA-RVAIEQV--VIPKGESVELLPRPSYILSIQIDLIRKYQLHY 598
I +S K DA EEA R A E + V+ E EL P+P+YI +Q LI++Y LH
Sbjct: 443 ----GIAISSKSDAEEEALREAQEGIEYVLTHDEPYELSPQPAYIRRLQHQLIQQYGLHS 498
Query: 599 QRVGKEPDARLRILP 613
+ VG EP ++RI P
Sbjct: 499 ESVGVEPFRKVRIYP 513
>gi|270308090|ref|YP_003330148.1| R3H domain-containing protein [Dehalococcoides sp. VS]
gi|270153982|gb|ACZ61820.1| R3H domain protein [Dehalococcoides sp. VS]
Length = 537
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/537 (44%), Positives = 335/537 (62%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R ++ LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 36 DLNALLEVLPPNIRQPLTNPANRENLIEIVMDLGRNPEARFPDREIILSNRDVTQEDIDY 95
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S++GDF DNRAGI RTLHRISAIRNRKG I+GLT RVGRAV G+ ++QDL+Q G S
Sbjct: 96 VSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQS 155
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 156 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 215
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 216 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 275
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 276 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAVD 335
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + +G +V + +EE KI+ +
Sbjct: 336 SILRGVSPSSEIRYLDENGE--------------------VVISKQQPSEE---KIKTTA 372
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P ++ L +Y++G+ + + ++ +++ +D ++L + +A ++ +
Sbjct: 373 EGLP-----AFKGKELPVMYLFGVNRSRMEEIAREMHLD--IKLAERPEQAQLMVTSRNY 425
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
++ A++ +IPIY K+ + Q + L L +G ++ + I
Sbjct: 426 YRRKPQRVRDAENMNIPIYVLKSHTPGQFHQLLATL----SGRDVAFTADKPPEIDLAIH 481
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +GKEP R+RI
Sbjct: 482 EAEEAIAQVKSSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGKEPHRRVRI 534
>gi|163847787|ref|YP_001635831.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aurantiacus J-10-fl]
gi|222525655|ref|YP_002570126.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163669076|gb|ABY35442.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449534|gb|ACM53800.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus sp. Y-400-fl]
Length = 539
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/554 (43%), Positives = 337/554 (60%), Gaps = 38/554 (6%)
Query: 73 DIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
DI+L LLA LP + + + + L+E+VMDLGR P AR+ + LSD ++T I
Sbjct: 9 DIQL--LLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDREVTSEDI 66
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
++ ++G+F DNRAGI RTLHRIS IRNR+G +IGLTCRVGRAV G+ ++++DLV+ G
Sbjct: 67 QYVIERIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVETG 126
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+L +G PG GKTT++RE ARVL ++ +KRV+IVDTS+EI G+GDIPHPGIG ARRMQV
Sbjct: 127 QSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQV 186
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
P QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QLV TAHG T++NL++
Sbjct: 187 PRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTLDNLMV 246
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP+L L+GG+Q VTLGDEEA RRG QKTVLERK P TFS VEI S + V+ + A
Sbjct: 247 NPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVYPDVAAA 306
Query: 373 VDAILSGRIPNVEIRRMQHDG--SKETVEK------EFFAETSSDEEDEMMVEDAMEVTE 424
VDAIL G P E R +G +E V + F ++ + +
Sbjct: 307 VDAILRGEDPPCEQRFRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGGSGPRLR 366
Query: 425 ERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISE 484
+R G PP R++ +G+ + I++L++ AV + D + E
Sbjct: 367 DRNGSASSTLTMPPQ------------RIFPFGVSRNRLQSAIERLRV-PAVIVRD-LKE 412
Query: 485 ADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITK------ALRALIDDHTGEF 538
A ++ L + +++S A+ +P+Y + +++ Q+ + LR L+DD F
Sbjct: 413 ATLVMTLKNYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPF 472
Query: 539 KDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHY 598
N S +AL E AI QV+ + +VEL PR SYI +Q + +Y L
Sbjct: 473 G--------NDSVVEEALLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRS 524
Query: 599 QRVGKEPDARLRIL 612
+ G +P+ R++I
Sbjct: 525 ESRGDDPNRRVKIF 538
>gi|188584674|ref|YP_001916219.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349361|gb|ACB83631.1| AAA ATPase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 445
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/461 (47%), Positives = 306/461 (66%), Gaps = 29/461 (6%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
++F+ EL +L + P +R + + +L +L+EVV+DLGRKP AR+P L+D +T
Sbjct: 2 EEFNQELKLMLEIFPPHIRENLQKRNDLEDLVEVVLDLGRKPEARYPREFIYLTDDTVTE 61
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E ++ G F +DNR+GI +TLHRISAIRNR+ I+GLTCRVG+AV G+A++++D+V
Sbjct: 62 KDLEFIYNRTGPFGLDNRSGIEKTLHRISAIRNRRDKIVGLTCRVGKAVYGTADIIRDIV 121
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ G L +G PGVGKTTI+RE AR+LA++++KRV+IVDTS+EI G+GDIPHP IG+ARR
Sbjct: 122 ERGDKTLLLGRPGVGKTTILREAARILADEFRKRVIIVDTSNEIAGDGDIPHPAIGHARR 181
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQV + QH V+IEAVENHMP+VI+IDEIGT EA AA TIA+RG+QL+ATAHG T+EN
Sbjct: 182 MQVKTPDKQHDVMIEAVENHMPEVIIIDEIGTYQEAEAARTIAERGVQLIATAHGNTLEN 241
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
LI+NP+L LIGG+ VTLGDEEA RR QKTVLERK PSTF VEI + L++H L
Sbjct: 242 LILNPTLSELIGGIDTVTLGDEEAKRRNSQKTVLERKAPSTFDAVVEIFDRNTLKIHAPL 301
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGK 429
E VD IL G P EIR ++DG E ++ +DE +EM DA
Sbjct: 302 EKVVDYILRGGAPRPEIRLRKNDGQHEIIQNSNI----TDEWNEM---DAQ--------- 345
Query: 430 IQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALL 489
E +++ L ++Y Y + + T+ +LIK+LQ+ +LT ++ EAD +L
Sbjct: 346 -----------TEGNYQNDALQKIYPYAVSKDTLKRLIKELQV--PAKLTKHMQEADIML 392
Query: 490 ALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
+ ++ +K + A +IP++ + + Q+ K LR +
Sbjct: 393 TVKAQKRKGAKKIQKAYQENIPVHVIRKNKEKQVEKVLRHI 433
>gi|57234427|ref|YP_181509.1| R3H domain-containing protein [Dehalococcoides ethenogenes 195]
gi|57224875|gb|AAW39932.1| R3H domain protein [Dehalococcoides ethenogenes 195]
Length = 509
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/537 (45%), Positives = 333/537 (62%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R + + LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 8 DLNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDY 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S++GDF DNRAGI RTLHRISAIRNRKG I+GLT RVGRAV G+ ++QDL+Q G S
Sbjct: 68 VSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 128 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 188 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 248 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + +G E V S + E V+ A E GK
Sbjct: 308 SILRGVSPSSEIRYLDENG--EVV-------ISKQQPSEEKVKVAAESLPLPKGK----- 353
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P +Y++G+ + + ++ +++ +D ++L + +A ++ +
Sbjct: 354 ELP--------------VMYLFGVNRSRMEEIAREMHLD--IKLAERPEQAQLMVTSRNY 397
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
++ A++ +IPIY K+ + Q + L L +G ++ + I
Sbjct: 398 YRRKPQRVRDAENMNIPIYVLKSHTPGQFHQLLATL----SGRDVAFTADKPPEIDLAIH 453
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +GKEP R+RI
Sbjct: 454 EAEEAIAQVKSSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGKEPHRRVRI 506
>gi|452205008|ref|YP_007485137.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
gi|452112064|gb|AGG07795.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
Length = 509
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/537 (44%), Positives = 334/537 (62%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R +++ LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 8 DLNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDY 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S++GDF DNRAGI RTLHRISAIRNRKG I+GLT RVGRAV G+ ++QDL++ S
Sbjct: 68 VSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 128 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 188 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 248 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + DG+ E V S + E V+ A E GK
Sbjct: 308 SILRGVSPSAEIRYL--DGNGEVV-------ISKQQPSEEKVKSAPESLPVFRGK----- 353
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P +Y++G+ + + ++ +++ +D +Q+++ + +A ++ +
Sbjct: 354 ELPI--------------MYLFGVNRSRMEEIAREMHLD--IQISERLEQAQLMVTSRNY 397
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+ A++ +IPIY K+ + Q + L L +G E + I
Sbjct: 398 YRSKPQRVRDAENMNIPIYVLKSHTPGQFQQLLATL----SGRDVAYAVEKPPEIDVAIH 453
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +G+EP R+RI
Sbjct: 454 EAEEAVAQVKTSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGREPHRRVRI 506
>gi|452203573|ref|YP_007483706.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
gi|452110632|gb|AGG06364.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
Length = 509
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/537 (44%), Positives = 333/537 (62%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R +++ LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 8 DLNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDY 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S+ GDF DNRAGI RTLHRISAIRNRKG I+GLT RVGRAV G+ ++QDL++ S
Sbjct: 68 VSSRTGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 128 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 188 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 248 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + DG+ E V S + E V+ A E GK
Sbjct: 308 SILRGVSPSAEIRYL--DGNGEVV-------ISKQQPSEEKVKSAPESLTVFRGK----- 353
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P +Y++G+ + + ++ +++ +D +Q+++ + +A ++ +
Sbjct: 354 ELPI--------------MYLFGVNRSRMEEIAREMHLD--IQISERLEQAQLMVTSRNY 397
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+ A++ +IPIY K+ + Q + L L +G E + I
Sbjct: 398 YRSKPQRVRDAENMNIPIYVLKSHTPGQFQQLLATL----SGRDVAYAVEKPPEIDVAIH 453
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +G+EP R+RI
Sbjct: 454 EAEEAVAQVKTSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGREPHRRVRI 506
>gi|221632236|ref|YP_002521457.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
gi|221156979|gb|ACM06106.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
Length = 562
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/552 (43%), Positives = 342/552 (61%), Gaps = 28/552 (5%)
Query: 79 LLALLPEEM--RIRVSEHPE-LYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
LLA+LP ++ +R PE +L+E+V+DLGR+P ARF + L+D +IT I +
Sbjct: 13 LLAVLPPDIVEALREYNSPEDRAKLLEIVLDLGRRPEARFEDREVYLADREITREDIAYV 72
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
S++G F DNRAGI RTLHRISAIR+R G I+GLTCR+GRAV G+ +++DL++ G S+
Sbjct: 73 ASRIGRFGDDNRAGIERTLHRISAIRSRSGEIVGLTCRIGRAVYGTVAIIRDLIESGESI 132
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT++RE ARVLA+D +KRV++VDTS+EI G+GDIPHP IG ARRMQVP
Sbjct: 133 LLLGRPGVGKTTMLRETARVLADDLRKRVIVVDTSNEIAGDGDIPHPAIGRARRMQVPTP 192
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QL+ TAHG T+EN++MNP+
Sbjct: 193 SLQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNTLENIMMNPT 252
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L LIGG+Q+VTL DEEA RRG QK++LERK P TF VEI S+ + VH + A VDA
Sbjct: 253 LSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFGVLVEIQSRNRVAVHRDVAAAVDA 312
Query: 376 ILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEER--------- 426
IL G+ VEIR DG+ +E + E M+ T +R
Sbjct: 313 ILRGQPLRVEIRERNPDGTVSIWYEELHGQDQRAERS--MLPSGPRRTYQRIPGTPAPTR 370
Query: 427 --TGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISE 484
T ++ PP+ E +RL+ +G+ + +I+QL + V+L + E
Sbjct: 371 PATPSGTIVAVAPPS--EPIRR---TMRLFPFGVSRNRLEDVIRQLML--PVELVRSPRE 423
Query: 485 ADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDH-TGEFKDLRS 543
ADA++ L + +K + A+ IP+Y ++++ Q+ R+L + GE + +
Sbjct: 424 ADAVVTLKNYFRKRPQVLREAEQRGIPVYVLRSNTAQQMANLFRSLFPERFAGEQEPESA 483
Query: 544 EDKINLSEKIDAL----EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQ 599
D + + D + EEA A QV+ +EL P+ ++I +Q L +Y L +
Sbjct: 484 ADDGDENAAHDRILAAMEEAEAAAHQVLQGTRSRIELRPQEAWIRRLQHQLAERYNLASR 543
Query: 600 RVGKEPDARLRI 611
G+EP R+ I
Sbjct: 544 SRGREPFRRVEI 555
>gi|269836978|ref|YP_003319206.1| single-stranded nucleic acid binding R3H domain-containing protein
[Sphaerobacter thermophilus DSM 20745]
gi|269786241|gb|ACZ38384.1| single-stranded nucleic acid binding R3H domain protein
[Sphaerobacter thermophilus DSM 20745]
Length = 573
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/567 (44%), Positives = 342/567 (60%), Gaps = 49/567 (8%)
Query: 79 LLALLPEEM--RIRVSEHPE-LYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
LLA+LP + + PE ELIE+V+DLGR P AR+P + LSD ++T I +
Sbjct: 27 LLAVLPPHVVEALEAQSTPEERKELIEIVLDLGRPPEARYPDREVYLSDREVTREDIAYV 86
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
++G F DNRAGI RTLHRISAIR+R G I+GLTCR+GRAV G+ +++DLV+ G SL
Sbjct: 87 AERIGRFGDDNRAGIERTLHRISAIRSRSGQIVGLTCRIGRAVYGTIGIVRDLVESGESL 146
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L +G PGVGKTT++RE ARVLA+D KRV+IVDTS+EI G+GDIPHP IG ARRMQVP
Sbjct: 147 LLLGRPGVGKTTMLRETARVLADDLGKRVIIVDTSNEIAGDGDIPHPSIGRARRMQVPTP 206
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
MQH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QLV TAHG T+ENL+MNP+
Sbjct: 207 AMQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTLENLMMNPT 266
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L LIGG+Q+VTL DEEA RRG QK++LERK P TF+ VEI ++ + V+ + + VDA
Sbjct: 267 LSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFTMMVEIQARDRVAVYRDVASAVDA 326
Query: 376 ILSGRIPNVEIRRMQHDGS-KETVEKEFFAETSSDEE---DEMMVEDAMEVTEERTGKIQ 431
IL G+ VE+R+ DGS T E+ + AE ++D + +AM E T +
Sbjct: 327 ILRGQPLRVEVRQRAPDGSVTVTYEQPYHAEHAADTDRRSGRRRGGEAMHPAAEETAPVV 386
Query: 432 FISEFPPNIGEDCWEDG-----LLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEAD 486
D G R++ +G+ + Q I QM + ++ +AD
Sbjct: 387 ----------RDVMRAGRGTPDRPARVFPFGVSRNRLEQAIH--QMAAPATVVRDLRDAD 434
Query: 487 ALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDK 546
++ L + ++ A++ IPIY + +++VQ+ LR+L + L+S
Sbjct: 435 VVVTLKNYYRRRPQPLREAEARGIPIYVLRNNTIVQMANLLRSLFAEQ------LQSSVM 488
Query: 547 INLSEKIDALEEARV--------------AIEQVVIPKGESVELLPRPSYILSIQIDLIR 592
SE+ D EEA V AI V+ + SV+L P+ S++ +Q L
Sbjct: 489 RQESERWDE-EEAEVPEDRLAAAMFEAEAAIHDVLSGEVSSVDLRPQASHVRRLQHQLAE 547
Query: 593 KYQLHYQRVGKEPDARLRILPFQTRRD 619
+Y L + G+EP + I RRD
Sbjct: 548 RYNLASRSRGREPQRYVEIF----RRD 570
>gi|147669347|ref|YP_001214165.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. BAV1]
gi|146270295|gb|ABQ17287.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. BAV1]
Length = 509
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/537 (44%), Positives = 333/537 (62%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R +++ LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 8 DLNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDY 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S+ GDF DNRAGI RTLHRISAIRNRKG I+GLT RVGRAV G+ ++QDL++ S
Sbjct: 68 VSSRTGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 128 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 188 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 248 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + DG+ E V S + E V+ A E GK
Sbjct: 308 SILRGVSPSAEIRYL--DGNGEVV-------ISKQQPSEEKVKSAPESLPVFRGK----- 353
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P +Y++G+ + + ++ +++ +D +++++ + +A ++ +
Sbjct: 354 ELPI--------------MYLFGVNRSRMEEIAREMHLD--IRISERLEQAQLMVTSRNY 397
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+ A++ +IPIY K+ + Q + L L +G E + I
Sbjct: 398 YRSKPQRVRDAENMNIPIYVLKSHTPGQFQQLLATL----SGRDVAYAVEKPPEIDVAIH 453
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +G+EP R+RI
Sbjct: 454 EAEEAVAQVKTSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGREPHRRVRI 506
>gi|206901965|ref|YP_002250502.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
gi|206741068|gb|ACI20126.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
Length = 515
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/544 (44%), Positives = 332/544 (61%), Gaps = 40/544 (7%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
DD D + LA+ P +++ R+ + P++ +LIEVV+DLGR+ ARF T
Sbjct: 10 DDLD----KFLAIFPSDIKSRLEQDPDIKDLIEVVLDLGREIEARFYKKTVVFEGRFTTE 65
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+ + ++VG+F+ D RAGI RTLHRISAI NR G IIGLTCRVGRAV G+ ++++D++
Sbjct: 66 EDLNYIIARVGEFSGDKRAGIERTLHRISAIENRHGRIIGLTCRVGRAVLGTVDIIRDVI 125
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ G ++L +G PGVGKTT++RE ARVLA++ KRV+I+DTS+EIGG+GDIPHP IG ARR
Sbjct: 126 ETGKNILLLGRPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPAIGRARR 185
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVPN QH V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+QL+ TAHG+T++N
Sbjct: 186 MQVPNPAKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAHGITLQN 245
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
L++NP+L L+GG+Q VTL DEEA RRG QKTVLERK P TF +EI + L +HH +
Sbjct: 246 LLLNPTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRLAIHHDV 305
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGK 429
TVDA+L G I EIR +G + VE + +EE + + ER +
Sbjct: 306 AKTVDALLRGYIIKPEIRLRTPEGEVKKVEAPTIEPSEEEEEVSVFGKP------EREKR 359
Query: 430 IQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALL 489
+ + FP YGI + + I+ L + V N+SEA LL
Sbjct: 360 TEPLKIFP------------------YGISRNRLEKAIRNLGVPAFV--VKNLSEASCLL 399
Query: 490 ALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINL 549
L + K+ + A+ I I +++++ QI + L G K E
Sbjct: 400 ILKAHQKRAKDLLKEAEKKGIKIAVLRSNTVTQIERFLSEEFGISVGTSKSDAEE----- 454
Query: 550 SEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARL 609
+AL EA+ IE V+ E EL P+P+YI +Q LI++Y L+ + VG EP ++
Sbjct: 455 ----EALREAQEGIE-YVLTHDEPYELSPQPAYIRRLQHQLIQQYGLYSESVGVEPFRKV 509
Query: 610 RILP 613
RI P
Sbjct: 510 RIYP 513
>gi|73748587|ref|YP_307826.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. CBDB1]
gi|289432613|ref|YP_003462486.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. GT]
gi|73660303|emb|CAI82910.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. CBDB1]
gi|288946333|gb|ADC74030.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. GT]
Length = 509
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/537 (44%), Positives = 332/537 (61%), Gaps = 38/537 (7%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L LL +LP +R +++ LIE+VMDLGR P ARFP + LS+ +T I++
Sbjct: 8 DLNALLEVLPPHIRQPLTDPANRKNLIEIVMDLGRTPEARFPDREIILSERDVTQEDIDY 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+S+ GDF DNRAGI RTLHRISAIRNRK I+GLT RVGRAV G+ ++QDL++ S
Sbjct: 68 VSSRTGDFGDDNRAGIERTLHRISAIRNRKDKIVGLTLRVGRAVFGTIKIIQDLIKSDQS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT++RE+ARVLA D KKRV+IVDTS+EI G+GDIPHP IG+ARRMQV
Sbjct: 128 VLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVRT 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+MQH V+IEAVENHMPQVIVIDEIGT+LEA+AA TIA+RG+QLV TAHG ++NL++NP
Sbjct: 188 PDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q+VTLGDEEA RRG QKT+LER+ P TF VEI + ++ VH + A VD
Sbjct: 248 TLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+IL G P+ EIR + DG+ E V S + E V+ A E GK
Sbjct: 308 SILRGVSPSAEIRYL--DGNGEVV-------ISKQQPSEEKVKSAPESLTVFRGK----- 353
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
E P +Y++G+ + + ++ +++ +D +Q+++ + +A ++ +
Sbjct: 354 ELPI--------------MYLFGVNRSRMEEIAREMHLD--IQISERLEQAQLMVTSRNY 397
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+ A++ +IPIY K+ + Q + L L +G E + I
Sbjct: 398 YRSKPQRVRDAENMNIPIYVLKSHTPGQFKQLLATL----SGRDVAYAVEKPPEIDVAIH 453
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
EEA ++ IP VEL P+ +YI Q + K L +G+EP R+RI
Sbjct: 454 EAEEAVAQVKTSHIP----VELSPQGAYIRRFQHIIAEKEHLSSHSLGREPHRRVRI 506
>gi|269925800|ref|YP_003322423.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermobaculum terrenum ATCC BAA-798]
gi|269789460|gb|ACZ41601.1| single-stranded nucleic acid binding R3H domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 551
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/552 (43%), Positives = 338/552 (61%), Gaps = 35/552 (6%)
Query: 66 YSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDC 125
Y+V DD D +LA +P + + E P+L +LIEVVMDLGR P ARFP + +L D
Sbjct: 13 YTVTDDLDA----MLAAIPPRISRPLKEMPDLPDLIEVVMDLGRLPEARFPHREVTLGDN 68
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
++T + + S++G F DNRAGI RTLHRISAIRNRKG +IG+TCRVGRAV G+ N++
Sbjct: 69 EVTHEDLRYVISRIGSFGDDNRAGIERTLHRISAIRNRKGDVIGITCRVGRAVMGTINII 128
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
+DLV+ G S+L +G PGVGKTT++RE+ARVL+ D +KRV+IVDTS+EI G+GDIPHP IG
Sbjct: 129 RDLVETGKSILILGRPGVGKTTMLREVARVLSEDLRKRVIIVDTSNEIAGDGDIPHPAIG 188
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
ARRMQVP MQH V+IEAVENHMP+VI+IDEIGT+LEA AA TIA+RG+QL+ TAHG
Sbjct: 189 RARRMQVPTPSMQHAVMIEAVENHMPEVIIIDEIGTELEAAAARTIAERGVQLIGTAHGN 248
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
T+ENL+MNP+L LIGG+Q+VTLGDEEA RRG QK++LERK P TF+ VEI + + +
Sbjct: 249 TLENLMMNPTLSDLIGGIQSVTLGDEEAKRRGTQKSILERKAPPTFNILVEIQDRDRVAI 308
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEK---EFFAETSS----DEEDEMMVED 418
H + TVDAIL G E+R G K +E+ +F E S + D +
Sbjct: 309 HPDVAETVDAILRGYEIKPEVRWRDATG-KVHIERGVASYFQERPSRRLENRMDSGIDRK 367
Query: 419 AMEVTEE-----RTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMD 473
++ VT E R K Q E P E + ++Y +G+ + Q ++M
Sbjct: 368 SVPVTTETQNIPRNTK-QESEETLPEAQEPIIKPK---KVYPFGVSRNKLEQ--AAIRMG 421
Query: 474 DAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDD 533
+ + N+ EA+ ++ + + +K A + +Y +T+S I + L +L
Sbjct: 422 VPIIIVKNLDEAEVVITVDNYYRKAPPAIKDAGTRGKSVYVLRTNSATHIERLLSSLF-- 479
Query: 534 HTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRK 593
H I + + A EA A ++++ + +V+L P+ I +Q + +
Sbjct: 480 HI----------PIPVDPVLSAQYEAEEAAQKILNDEVPAVKLSPQTHSIRRMQHQIAER 529
Query: 594 YQLHYQRVGKEP 605
Y L + GKEP
Sbjct: 530 YNLQSRSSGKEP 541
>gi|332295596|ref|YP_004437519.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
gi|332178699|gb|AEE14388.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
Length = 520
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/534 (41%), Positives = 338/534 (63%), Gaps = 28/534 (5%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
L+ +LP++ + + E L +++E+V+DLGR P RFP F ++ Q+T +++ +
Sbjct: 13 LIDILPDDFKYPILELKNLNDIVEIVLDLGRYPEVRFPEDAFEITTKQVTREDLQNVVKK 72
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
VG F+ DNRAGI RTLHRIS IRNR G I+GLT RVGRAV G+ ++++D+V+ ++L +
Sbjct: 73 VGVFSGDNRAGIERTLHRISCIRNRSGEIVGLTLRVGRAVFGTIDIIKDIVESKENILLM 132
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
GPPG+GKTT +REIARVL+ D K+RV+++DTS+EIGG+GDIPHP IG +RRMQVP E Q
Sbjct: 133 GPPGIGKTTKLREIARVLSVDMKRRVIVIDTSNEIGGDGDIPHPAIGKSRRMQVPTPEKQ 192
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
H V+IEAVENHMPQVI++DEIGT+LEA AA TIA+RG+QL+ATAHG ++ NLIMNP+L
Sbjct: 193 HAVMIEAVENHMPQVIIVDEIGTELEAQAARTIAERGVQLIATAHGNSLVNLIMNPTLSD 252
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GGVQ VTL DEEA RR QKT+ ERK TF+ +E++ + ++ +H +++ VD +L
Sbjct: 253 LVGGVQVVTLSDEEAKRRRTQKTIQERKTQPTFNVVIELLDREKMVIHKNVDKVVDQLLK 312
Query: 379 GRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPP 438
G E+R DG + + +E E D+ ++ + +E +R + EF
Sbjct: 313 GEQIRPEVRSKSSDG--KIIIEEHRMELKEDKFEDKNSYNNLEA--KRNLDVNVCKEF-- 366
Query: 439 NIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKN 498
+ ++ +G+ + + ++ K+L++ + + +++ AD ++ L LK
Sbjct: 367 ------------LNIFSFGVSKDILERVSKELRV--STNIVKDLNVADVVITLKGFLKSR 412
Query: 499 SGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEE 558
+ ++P+Y +++++ Q K L +I + F+D+ EK +AL E
Sbjct: 413 GKFFDEVEDKNLPVYVMRSNTITQARKVLSEIIQLRSVNFEDMD-------FEKFEALRE 465
Query: 559 ARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRIL 612
A AI++V+ K SVEL PR +Y +Q L+ KY L + + +EP R++I
Sbjct: 466 AEEAIKKVLRDKV-SVELSPRNAYFRRLQHQLVEKYNLFSESLDEEPRRRVKIF 518
>gi|156743650|ref|YP_001433779.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus castenholzii DSM 13941]
gi|156234978|gb|ABU59761.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus castenholzii DSM 13941]
Length = 538
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/545 (43%), Positives = 332/545 (60%), Gaps = 22/545 (4%)
Query: 73 DIELGRLLALLPEEMRIRVSEHPELYE-LIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
+IEL LL LP +R + P+ E L+EV+MDLGR P AR+ + + LS+ ++T
Sbjct: 10 NIEL--LLETLPPPIRQAIEAGPDDQEDLLEVIMDLGRLPEARYRNHERFLSNHEVTQED 67
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
I++ +++G F DNRAGI RTLHRISAIRNR G +IGLTCRVGRAV G+ +L+DL++
Sbjct: 68 IDYVIARIGAFGEDNRAGIPRTLHRISAIRNRTGRVIGLTCRVGRAVFGTITILRDLIES 127
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G S+L +G PGVGKTT++RE ARVLA + +KRV+IVDTS+EI G+GDIPHPGIG ARRMQ
Sbjct: 128 GKSVLLLGRPGVGKTTMLRETARVLAEELRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQ 187
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP QH V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QL+ TAHG T+ENL+
Sbjct: 188 VPRPSEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGQTLENLL 247
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
NP+L LIGG+Q VTLGDEEA RRG QKTVLERK P TF VEI + ++ V+ + +
Sbjct: 248 SNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQVTVYPDVAS 307
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQ 431
VD +L P E+RR DG E V + S E + M R +
Sbjct: 308 AVDNLLRAESPRAEVRRRAADGQIEVV-------SVSAVEQHIQTMPGMRRGGGRERGER 360
Query: 432 FISE----FPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADA 487
P G R+Y +G+ + + I L + + ++ EA
Sbjct: 361 GARSSAMLAPTQAGMAPQ------RIYPFGVSRDRLERAIATLHV--PATIVRDMGEATM 412
Query: 488 LLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI 547
++ L + ++ + A+ +P+Y + ++L Q+ + L + + + RS ++
Sbjct: 413 VMTLKNYYRQGAQRVRQAEERGVPVYVLRNNTLAQMERQLADVFNISLNDNGAQRSAERD 472
Query: 548 NLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDA 607
+ +AL E AI QV+ + SVEL P+ SY+ +Q + +Y L + G+EP+
Sbjct: 473 DDEAMTEALLEVETAITQVLNGERSSVELQPQSSYVRRLQHQMAERYNLQSESRGREPNR 532
Query: 608 RLRIL 612
R++I
Sbjct: 533 RVKIF 537
>gi|87300916|ref|ZP_01083758.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
gi|87284787|gb|EAQ76739.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
Length = 564
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/558 (42%), Positives = 321/558 (57%), Gaps = 27/558 (4%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D RLL +LPE + ++ +L+EVV+DLGR P AR+P L I
Sbjct: 21 ITDDLD----RLLEVLPERVGEALASPLSRDQLLEVVLDLGRSPEARYPGRAQLLDQRPI 76
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ ++G F DNRAGI RTLHRISAIRNR G ++GLTCRVGRAV G+ +++D
Sbjct: 77 DRADLAAVVQRLGSFGGDNRAGIERTLHRISAIRNRGGEVVGLTCRVGRAVFGTVAMVRD 136
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L+ G SLL +G PGVGKTT +REIARVLA+D ++RV+++DTS+EI G+GDIPHP IG A
Sbjct: 137 LLDSGQSLLLMGRPGVGKTTALREIARVLADDLERRVVVIDTSNEIAGDGDIPHPAIGRA 196
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG +
Sbjct: 197 RRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNEL 256
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
NLI NP+L LIGG+Q+VTLGDEEA RRG QKTVLER TF AVE+ S++ VH
Sbjct: 257 ANLIKNPTLADLIGGIQSVTLGDEEARRRGSQKTVLERCADPTFPLAVEMHSRSRWLVHR 316
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDG------------SKETVEKEFFAETSSDEEDEMM 415
+ TVD L G+ ++R + DG S + A S +
Sbjct: 317 DVARTVDQQLRGQPVRPQVRELGSDGRLRLNDPEPGPPSPRMPRRGLVAAGDSPAPSPAL 376
Query: 416 VEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDA 475
+ E + +RLY G+ + Q+++ Q+
Sbjct: 377 APVPLPDPELLPPHRRSAPPA---------PAAPPLRLYCCGVSPQLLEQVVRSRQL--P 425
Query: 476 VQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHT 535
VQ + EADA+L+L +L + +++ A +PI K +L QI + + L+
Sbjct: 426 VQRASQVEEADAVLSLRQQLGREPQVRSQALEQHVPILVIKADTLPQIQRGVERLLRRRG 485
Query: 536 GEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQ 595
G+ + + + A+EE R+A+EQVV+ +G VELLPR + IQ D + Y
Sbjct: 486 GDGSGVSTGPASAPDDAHGAMEECRLAVEQVVLRQGRPVELLPRSPSVRRIQADQVNGYG 545
Query: 596 LHYQRVGKEPDARLRILP 613
L G RLR+ P
Sbjct: 546 LRSAEFGSGDLQRLRVFP 563
>gi|254432798|ref|ZP_05046501.1| ATPase [Cyanobium sp. PCC 7001]
gi|197627251|gb|EDY39810.1| ATPase [Cyanobium sp. PCC 7001]
Length = 579
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/574 (41%), Positives = 338/574 (58%), Gaps = 33/574 (5%)
Query: 60 SDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGD 119
S + V DD D RLLA+LP ++ ++ L+EVV+DLGR P AR+P
Sbjct: 18 SGADAGQGVTDDLD----RLLAVLPAPVQAALASAESRAHLLEVVLDLGRLPEARYPGRA 73
Query: 120 FSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVS 179
L D + ++ Q+G F DNRAGI+ TLHRISAIRNR G I+GLTCRVGRAV
Sbjct: 74 ALLGDRPVERSDLDAVVDQLGAFGADNRAGIACTLHRISAIRNRIGTIVGLTCRVGRAVF 133
Query: 180 GSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDI 239
G+ +++DL+ G SLL +G PGVGKTT +REIARVLA+D KRV+++DTS+EI G+GDI
Sbjct: 134 GTVVMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDI 193
Query: 240 PHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLV 299
PHP IG ARRMQV ++QH+V+IEAVENHMP+VIVIDEIGT+ EA AA TIA+RG+ LV
Sbjct: 194 PHPAIGRARRMQVVRPDLQHEVMIEAVENHMPEVIVIDEIGTEREAQAARTIAERGVMLV 253
Query: 300 ATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVS 359
ATAHG + NLI NP+L L+GG+Q+VTLGDEEA RR QKTVLER TF AVE+ S
Sbjct: 254 ATAHGNELTNLIKNPTLSDLVGGIQSVTLGDEEARRRRTQKTVLERAAEPTFPLAVEMHS 313
Query: 360 KTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDA 419
+ +H + TVD +L G+ ++R + DG + ++ + A S
Sbjct: 314 RHRWLIHRDVAQTVDGLLRGQTARPQVRELGPDG-RLQLQDDLPARPHSVSRPLPPPAVR 372
Query: 420 MEVTEERTG-------KIQFISEFPPNIGEDCWEDGLL----------IRLYVYGILEAT 462
TE G + Q PP + +R+Y GI +T
Sbjct: 373 ASGTEAPAGLPLREAARHQAAPASPPPLEPSLAAAASAPPPASTGPAPLRVYGAGISRST 432
Query: 463 VVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQ 522
+ Q+++ Q+ AV ++ AD +L+ +L ++ ++ A+ +PI K+ ++ Q
Sbjct: 433 LEQVVRARQLPVAV--VGSVELADVVLSARQQLGRDPHVRRLAQDLGLPILVIKSGAMPQ 490
Query: 523 ITKALRALIDDHTGEFKDLRSEDKINLSEKID---ALEEARVAIEQVVIPKGESVELLPR 579
+ +AL L+ H + E +++ E D ALEE R+A+E VV+ +G+ VELLPR
Sbjct: 491 VQRALERLLARHRPQ------EPSVSVPEGDDTLAALEECRLAVEHVVLAQGQPVELLPR 544
Query: 580 PSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ +Q +L +Y++ G D RLR+ P
Sbjct: 545 SERVRQLQRELASRYRVRTAVFGPSGDQRLRLFP 578
>gi|116748317|ref|YP_845004.1| single-stranded nucleic acid binding R3H domain-containing protein
[Syntrophobacter fumaroxidans MPOB]
gi|116697381|gb|ABK16569.1| single-stranded nucleic acid binding R3H domain protein
[Syntrophobacter fumaroxidans MPOB]
Length = 515
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/533 (43%), Positives = 333/533 (62%), Gaps = 37/533 (6%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGD 141
++P +R ++ E+P+ + L+E+V+DLGR P AR+P LS+ +++ + + S+V
Sbjct: 18 VMPRNIRAKIEENPQYHSLLEIVLDLGRIPEARYPGSIEELSEHPVSLEELNYVVSRVAR 77
Query: 142 FAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPP 201
F DNRAGI RTLHRISA RNR G++IGLTCRVGRAV G+ ++++D+V+ G SLL +G P
Sbjct: 78 FGDDNRAGIERTLHRISAFRNRSGSVIGLTCRVGRAVFGTVDIVRDVVESGHSLLLLGRP 137
Query: 202 GVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKV 261
GVGKTT++RE ARVLA+D+ KRV+IVDTS+EIGG+GDIPHPGIG ARRMQVP QH V
Sbjct: 138 GVGKTTLLREAARVLADDFGKRVIIVDTSNEIGGDGDIPHPGIGRARRMQVPTPGNQHGV 197
Query: 262 LIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
+IEAVENHMP+VIVIDEIGT+ EA+AA TIA+RG+QL+AT HG T+ENL+ NPSL L+G
Sbjct: 198 MIEAVENHMPEVIVIDEIGTEAEALAARTIAERGVQLIATVHGNTLENLLQNPSLSDLVG 257
Query: 322 GVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRI 381
G+Q+VTL DEEA RRG QKTVLERK P TF+ +EI K L VHH + + +D L G
Sbjct: 258 GLQSVTLSDEEARRRGTQKTVLERKLPPTFNVVIEIQEKDRLAVHHDVASVIDYSLRGFP 317
Query: 382 PNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIG 441
+ E+R DGS E + + E + E + R GK + + FP
Sbjct: 318 FSPEVRIRTGDGSVEVHKPQDRDEAAPAVEAAGPARGSW--AAHRRGKRKNLRVFP---- 371
Query: 442 EDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGI 501
YG+ + + I+ L + V ++ + +AD +L L S+ K+ S
Sbjct: 372 --------------YGVGRVRLERAIRNLGV--PVVVSADAEKADVILILKSQEKRQSKR 415
Query: 502 QAAAKSHDIPIYATKTSSLVQITKALRALID-DHTGEFKDLRSEDKINLSEKIDALEEAR 560
++ +P + ++++ QI LR++ TG +++ AL+EA
Sbjct: 416 LREIEARGVPFHLIRSNTATQIENFLRSIFSLQETGPVEEI-------------ALQEAE 462
Query: 561 VAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
VA+ + V+ + ++VEL PR S I +Q L ++ L + G+EP R+ I P
Sbjct: 463 VAMIK-VLDEQKAVELAPRNSGIRRLQHLLADQHGLRTESKGREPYRRVVIHP 514
>gi|88807880|ref|ZP_01123391.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
gi|88787919|gb|EAR19075.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
Length = 546
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/543 (43%), Positives = 336/543 (61%), Gaps = 10/543 (1%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL+LLP + + + +L+EVV+DLGR P AR+P +L + + +E
Sbjct: 9 DLQRLLSLLPASVGRVLEQDDHSDQLLEVVLDLGRLPEARYPGRSLALGERLLERKDLEE 68
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ +++DL+ S
Sbjct: 69 MVDRLGQFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAMVRDLLDSDQS 128
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA++ +KRV+++DTS+EI G+GDIPHP IG ARRMQV
Sbjct: 129 LLLMGRPGVGKTTALREIARVLADELQKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVAR 188
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP
Sbjct: 189 PELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALTNLIKNP 248
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+++VTLGDEEA RR QKTVLER TF A+E+ S+ VH + TVD
Sbjct: 249 TLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTVD 308
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L G+ P + R + GS V+ + + + + + TG +
Sbjct: 309 LLLRGQSPRPQERELTEHGSVRLVDSGVPNSPRAPQRRPALA--VVPLPNPETGSTRDSH 366
Query: 435 EFPPNI-GEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHS 493
G D D +R++ GI + + ++ + VQ D++S AD LL++
Sbjct: 367 RRDEETGGRD--RDAETLRVFCCGISRQRLEEAVRCHRW--PVQAVDDLSAADVLLSVRQ 422
Query: 494 KLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDH--TGEFKDL-RSEDKINLS 550
L ++ A+ ++PI K+ SL Q+ +AL L+ G+ L S ++ +
Sbjct: 423 GLGCQPDLRRQAREAEVPILVIKSDSLPQVERALERLLSRRPLAGDQPLLPTSGSELGRA 482
Query: 551 EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLR 610
+ + ALEE R+A+EQVV+P+G VELLPR +L +Q DL+ +Y+L G RLR
Sbjct: 483 DALAALEECRLAVEQVVMPEGRPVELLPRSDVVLQMQADLVARYRLRSDVYGPSDQRRLR 542
Query: 611 ILP 613
+ P
Sbjct: 543 VFP 545
>gi|159897031|ref|YP_001543278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Herpetosiphon aurantiacus DSM 785]
gi|159890070|gb|ABX03150.1| single-stranded nucleic acid binding R3H domain protein
[Herpetosiphon aurantiacus DSM 785]
Length = 565
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/575 (41%), Positives = 334/575 (58%), Gaps = 65/575 (11%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS-LSDCQITVHHIEHATS 137
LL+ LP + ++ H + ++IE+VMDLGR P ARF S LS+ +++ +++ T
Sbjct: 14 LLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTE 73
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
++G F DNRAGI RTLHRISAIRNR G +IGLTCRVGRAV G+ +++DLV+ G S+L
Sbjct: 74 RIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILI 133
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PG GKTT++RE+ARVLA+D+ KRV+IVDTS+EI G+GDIPHPGIG ARRMQV
Sbjct: 134 LGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVARPAE 193
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH V+IEAVENHMPQVIVIDEIGT+LEA AA TIA+RG+QLV TAHG T+ENL++NP+L
Sbjct: 194 QHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHGNTLENLMLNPTLS 253
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
LIGG+Q VTLGDEEA RRG QKTVLERK P TF VEI S ++ ++ + + VD+IL
Sbjct: 254 DLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSIL 313
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFP 437
G P E R G E V E E E M+ R G +
Sbjct: 314 QGNEPTAEQRTKDEQG--EIVVHEGRPERLDSEASTMLT--------RRGGYRSRERDRD 363
Query: 438 PNIGEDCW------------------------------EDGLLI---------RLYVYGI 458
+ GE W E +L+ +++ +G+
Sbjct: 364 RDHGERDWRRKSERREAQREERERYSLALNGSTSPKTEEPSVLVKKPGKNAPAKIFAFGV 423
Query: 459 LEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTS 518
+ + + +L + L + +A ++ L + +++ A+ IP+Y +++
Sbjct: 424 SRNRLEKALDRLGI--TASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRSN 481
Query: 519 SLVQITKALRALIDDHTGEFKDLRSEDKINLSEKI-DALEEARVAIEQVVIPKGESVELL 577
+ Q+ + L + E I+ S+ + +A+EE AI QV+ ES+EL
Sbjct: 482 TQTQMEECLGSAF------------EISISPSDPLSEAMEEVEEAISQVMDGSTESIELS 529
Query: 578 PRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRIL 612
P+ SY+ +Q ++ +Y L + GKEP R+RI
Sbjct: 530 PQSSYVRRLQHQIVERYNLQSESTGKEPRRRIRIF 564
>gi|302835702|ref|XP_002949412.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
gi|300265239|gb|EFJ49431.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
Length = 2804
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/320 (61%), Positives = 244/320 (76%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +L+ LLP +R + +HP++ EL+EVVMDLGR PLARFP+GD LS IT +E
Sbjct: 2101 ELMKLVQLLPSSVRSALEDHPDMLELLEVVMDLGRPPLARFPTGDEKLSQQPITADDLEF 2160
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A QVG+F DNRAGI RTLHRIS +RNR G IIGLTCRVGRAV GSA +++DLV GAS
Sbjct: 2161 AVRQVGEFGGDNRAGIDRTLHRISCMRNRTGRIIGLTCRVGRAVKGSALMVRDLVLSGAS 2220
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT IRE++R+LA++ KRV+IVDTS+EIGG+GDIPH GIG ARRMQV
Sbjct: 2221 ILLLGRPGVGKTTAIREVSRMLADECSKRVVIVDTSNEIGGDGDIPHSGIGRARRMQVAA 2280
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH+V+IEAVENHMPQVIVIDEIGT E AA TIAQRG+QLVATAHG +EN+I NP
Sbjct: 2281 PEAQHRVMIEAVENHMPQVIVIDEIGTAEECAAARTIAQRGVQLVATAHGNQLENVIKNP 2340
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L L+GG+Q+VTLGDEEA RRGVQK++LER P TF +E++ +T+ RVH + VD
Sbjct: 2341 QLADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKWRVHLDVGQAVD 2400
Query: 375 AILSGRIPNVEIRRMQHDGS 394
+L+G ++R DG+
Sbjct: 2401 VVLAGGDAGGQVRERAADGT 2420
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%)
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
+G +RLY Y + E + ++ +++ V +T ++S+ADA+LAL +K+K+NS ++A A+
Sbjct: 2554 EGAELRLYPYELDEDVLWDVLCDMRLLGKVFITTSLSKADAVLALRAKVKQNSELRAMAR 2613
Query: 507 SHDIPIYATKTSSLVQITKALRALI 531
+ +PIYA KTS + KA R L+
Sbjct: 2614 ENGVPIYAVKTSGSANLVKAFRTLM 2638
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 563 IEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPD--ARLRILP 613
+ ++VIP + VEL+PR +L QI L+ +Y+L Y+ VG RLRILP
Sbjct: 2745 VTEIVIPLHQPVELMPRAPSVLEAQIRLLDRYKLSYEIVGGSGVDLGRLRILP 2797
>gi|86605726|ref|YP_474489.1| R3H domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554268|gb|ABC99226.1| R3H domain protein [Synechococcus sp. JA-3-3Ab]
Length = 633
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/353 (56%), Positives = 265/353 (75%)
Query: 41 TFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYEL 100
+F ++ F+ + + S R S+ ++ +LG+LL +LP +R R+ +HP+L L
Sbjct: 2 SFLVQPFNPSADREGAPHRSSERTSFPGQVLYNDDLGKLLDVLPASIRQRLEQHPQLDRL 61
Query: 101 IEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAI 160
+EVV+DLGR+P ARFP LS+ +T ++ SQVG+F+ DNRAGI+ TLHRISAI
Sbjct: 62 VEVVLDLGRRPEARFPGFADYLSEEVVTRADLDLVISQVGEFSGDNRAGIASTLHRISAI 121
Query: 161 RNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
RNR+G IIGLTCRVGR V G ++++DLV+ G S+L +G PGVGKTT +REIARVLA++
Sbjct: 122 RNRQGTIIGLTCRVGRCVIGVISMIRDLVEQGRSMLLLGRPGVGKTTALREIARVLADEL 181
Query: 221 KKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
KRV+I+DTS+EI G+GD+PHPGIG ARRMQV + E+QHKV+IEAVENHMP+V+VIDEIG
Sbjct: 182 HKRVIIIDTSNEIAGDGDVPHPGIGRARRMQVASPELQHKVMIEAVENHMPEVVVIDEIG 241
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK 340
T+LEA+A+ TIA+RG+QLVATAHG I+NLI NP+L LIGG+Q+VTLGDEEA RRG QK
Sbjct: 242 TELEALASRTIAERGVQLVATAHGNRIDNLIKNPTLSDLIGGIQSVTLGDEEARRRGCQK 301
Query: 341 TVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDG 393
+VLERK P TF AVE++ + +H + ATVD +L R P V++R + G
Sbjct: 302 SVLERKAPPTFEIAVEMLERDRWVIHEDVAATVDRLLRNREPLVQLRSLDERG 354
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
DG L R+Y YG+ + Q+I+ L++ + +T ++ EAD +LAL S+++ S IQ A
Sbjct: 467 DGPL-RIYPYGVSRFHLEQVIQTLKL--SADVTKDLDEADIVLALRSQVRSRSKIQQLAH 523
Query: 507 SHDIPIYATKTSSLVQITKALRAL--IDDHTGEFKDLRSEDKINLSEKIDALEEARVAIE 564
+ IPI+ K ++L+ + +ALR + I+ G DL + + ++ +ALEEAR+A+E
Sbjct: 524 ARQIPIHTVKANTLIALARALRHILNIESEDGSDSDLELFIRASSGDETEALEEARLAVE 583
Query: 565 QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
Q+VIPK + VELLPR I +Q L+ Y L Q G+EP+ RLRI P
Sbjct: 584 QIVIPKSQPVELLPRSPLIRKLQHQLVEHYHLRAQSFGEEPNRRLRIYP 632
>gi|384248329|gb|EIE21813.1| hypothetical protein COCSUDRAFT_53863 [Coccomyxa subellipsoidea
C-169]
Length = 499
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/527 (44%), Positives = 312/527 (59%), Gaps = 39/527 (7%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MDLGR PLAR PSGD LSD IT + +A S++G F DNRAGI RTLHRIS +RNR
Sbjct: 1 MDLGRTPLARLPSGDVRLSDDVITQEDLAYAISKLGAFGDDNRAGIDRTLHRISCMRNRD 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
G IIGLTCR GRAV GSA++ DL+ G S+LF+G PGVGKTT+IRE +R+L+ ++KRV
Sbjct: 61 GRIIGLTCRAGRAVPGSADMAADLIASGRSILFMGRPGVGKTTVIRETSRLLSQLHQKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+I+DTS+EIGG+GDI H GIG ARRMQV QH+ +IEAVENHMP+V+++DEIGT+ E
Sbjct: 121 VIIDTSNEIGGDGDIAHIGIGRARRMQVSKVAAQHRTMIEAVENHMPEVVIVDEIGTEAE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A+AA +IAQRG+QLVATAHG + LI NP+L LIGG+Q VTL DEEA RR KTV+E
Sbjct: 181 ALAARSIAQRGVQLVATAHGGELARLIKNPTLSDLIGGIQAVTLSDEEAKRRKGPKTVIE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
R P TF AVEI+ + RVH L +
Sbjct: 241 RCAPPTFDVAVEIIDRNTWRVHLDL------------------------AAAVDAALKVM 276
Query: 405 ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVV 464
E SSD E +A + + N+ E I + +G+ V
Sbjct: 277 EESSDREPRAGGSEA-------ESSWSTVGWYGGNVDEAA------IAILPHGLDGHGVK 323
Query: 465 QLIKQLQMDDAVQLTDNISEADALLALHSKLKKNS-GIQAAAKSHDIPIYATKTSSLVQI 523
+I L + +V LT ++ EADA+L + +L+ + A++ I++ K+ S +
Sbjct: 324 DVIAGLGLQRSVLLTPHLHEADAVLTVRERLRGGGDDLINEARAAGQAIFSMKSGSPPSV 383
Query: 524 TKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYI 583
KA+RAL + + N +K ALEEA+ A+E++V+ G + ELLPR I
Sbjct: 384 IKAIRALAGIYPSPLSLRDASAATNYKKKSAALEEAKAAVEELVLAGGHAAELLPRSPDI 443
Query: 584 LSIQIDLIRKYQLHYQRVGKEPDARLRILP-FQTRRDEPRNSGETFD 629
LS Q DL+R Y L ++ VG + DARLRILP D+ R+ G +D
Sbjct: 444 LSAQEDLVRSYDLPFEVVGSDADARLRILPQGYVSGDKERSLGAEWD 490
>gi|374853797|dbj|BAL56696.1| single-stranded nucleic acid binding R3H [uncultured gamma
proteobacterium]
Length = 501
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/550 (43%), Positives = 328/550 (59%), Gaps = 55/550 (10%)
Query: 66 YSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDC 125
Y VNDD ++ LL LP +R R++E P +L+E+V+DLGR P AR+ L++
Sbjct: 4 YPVNDDLEL----LLQTLPGSLRDRLAELPN-EDLLEIVLDLGRPPQARYADRSLLLAET 58
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
+T + + VG+F DNRAGI TLHRISAIRNRKG I+GLT RVGRAV+G+ +L+
Sbjct: 59 PVTRADLNYVVDWVGEFGADNRAGIEGTLHRISAIRNRKGEIVGLTLRVGRAVTGTIDLI 118
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
+DL++ G SLL +G PGVGKTT +RE+ARVLA+D+ KRV+++DTS+EIGG+GD+PHP IG
Sbjct: 119 RDLIESGRSLLLLGRPGVGKTTKLREVARVLADDFGKRVIVIDTSNEIGGDGDVPHPAIG 178
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
+ARRMQVP+ + QH V+IEAVENHMP+VIVIDEIGT EA+AA TIA+RG+QL+ TAHG
Sbjct: 179 SARRMQVPHPDKQHAVMIEAVENHMPEVIVIDEIGTAAEALAARTIAERGVQLIGTAHGN 238
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
T+ NL+ NP+L L+GGVQ VTLGDEEA RG QKTV ERK P TF VE+VS+ EL V
Sbjct: 239 TLANLVQNPTLCDLVGGVQTVTLGDEEARFRGTQKTVSERKAPPTFEQVVELVSRDELIV 298
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE 425
H A VDA+L G G + T E S
Sbjct: 299 HLDTAAAVDALLRGE---------DAGGVRRTAAGETPVAMS------------------ 331
Query: 426 RTGKIQFISEFPPNIGEDCWEDGLL--IRLYVYGILEATVVQLIKQLQMDDAVQLTDNIS 483
Q S FP G+ + L IR+Y Y I V ++I+ + D + N
Sbjct: 332 -----QSASPFP---GQALSPELLKGEIRIYPYAISRDLVERVIRSFRFD--ARTVANPE 381
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRS 543
AD +LAL S+ +++ ++ ++ +P++ K S+ QI + L +
Sbjct: 382 RADMVLALRSR-AEDARLRRILNAYKLPLHCVKKSTTAQIRRLLLHVFSLPV-------- 432
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
D + E A+ E A+ + V+ + +VEL P+P I IQ ++ +Y L + VG
Sbjct: 433 -DAADGDEVEAAVNETEAAVRK-VLEESVAVELAPQPREIRKIQHHIVNRYHLVAESVGC 490
Query: 604 EPDARLRILP 613
+P RL I P
Sbjct: 491 DPFRRLVIYP 500
>gi|427703065|ref|YP_007046287.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
gi|427346233|gb|AFY28946.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
Length = 534
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/529 (43%), Positives = 321/529 (60%), Gaps = 18/529 (3%)
Query: 95 PELYE-LIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRT 153
PE E L+EVV+DLGR P AR+P +L + I + ++G F DNRAGI RT
Sbjct: 13 PEQREGLLEVVLDLGRVPEARYPGRVRALGNDAIERADLAAVLQRLGPFGGDNRAGIERT 72
Query: 154 LHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIA 213
LHRISAIRNR G ++GLTCRVGRAV G+ +++DL+ G SLL +G PGVGKTT +REIA
Sbjct: 73 LHRISAIRNRTGDVVGLTCRVGRAVFGTVAMVRDLLDTGQSLLLMGRPGVGKTTALREIA 132
Query: 214 RVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
RVLA+D ++RV+++DTS+EI G+GDIPHP IG ARRMQV E+QH+V+IEAVENHMP+V
Sbjct: 133 RVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEV 192
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEA 333
IVIDEIGT+LEA AA TIA+RG+ LVATAHG + NLI NP+L L+GG+Q+VTLGDEEA
Sbjct: 193 IVIDEIGTELEAQAARTIAERGVMLVATAHGNELANLIRNPTLSDLVGGIQSVTLGDEEA 252
Query: 334 HRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDG 393
RR QKTVLER TF AVE+ S+ VH + TVD +L G+ + ++R + DG
Sbjct: 253 RRRRTQKTVLERAAEPTFPLAVEMHSRHRWLVHRDVAGTVDLLLRGQPSHPQVRELGGDG 312
Query: 394 SKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFI-------SEFPPNIGEDCWE 446
+ + A V R G + P
Sbjct: 313 ------RLLLRDDGPAARPAPPPAWATAVAPRRPGPAPLAVVPLPDPAAPRPAPAATSAP 366
Query: 447 DGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAK 506
+R+Y G+ + + +++ Q+ VQ+ + +ADA+L++ +L ++ ++ A+
Sbjct: 367 ALPALRVYGVGLAAQQLEEAVRRRQL--PVQVVEGPEQADAVLSVRGQLGRDPELRRQAR 424
Query: 507 SHDIPIYATKTSSLVQITKALRALIDDHT--GEFKDLRSEDKINLSEKIDALEEARVAIE 564
+PI K+ + Q+ +A+ L++ GE + L + ALEE R+A+E
Sbjct: 425 DLGLPILVIKSDTPHQLQRAMERLLERRRGGGEADGGETAAPARLDDAHAALEECRLAVE 484
Query: 565 QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
QVV+P+G VELLPR + ++Q +L+ Y+L G+ RLR+ P
Sbjct: 485 QVVLPEGRPVELLPRSEAVRALQAELVHHYRLRSAVFGRGLQQRLRVFP 533
>gi|411119520|ref|ZP_11391900.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
gi|410711383|gb|EKQ68890.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
Length = 661
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 259/357 (72%), Gaps = 6/357 (1%)
Query: 52 SKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP 111
+ FS+ DS S + D L +LL +LP ++ ++ EHP+ L+EVVMDLGR+P
Sbjct: 35 NSFSNASTVDSSASIDMQTTDD--LNKLLHILPAPIQHKLREHPQRDTLVEVVMDLGRRP 92
Query: 112 LARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLT 171
ARFP L++ ++ I ++VGDF DNRAGI RTLHRISAIRNR+G IIGLT
Sbjct: 93 EARFPGRAEYLAETPVSQQDINECIARVGDFGGDNRAGIERTLHRISAIRNRRGEIIGLT 152
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSS 231
CRVGRAV G+ +++DLV+ G S+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+
Sbjct: 153 CRVGRAVFGTIGMIRDLVESGKSILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSN 212
Query: 232 EIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTI 291
EI G+GD+PHP IG ARRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TI
Sbjct: 213 EIAGDGDVPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTI 272
Query: 292 AQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTF 351
A+RG+QLV TAHG +ENLI NP+L L+GG+Q+VTLGDEEA RRG QK+VLERK P TF
Sbjct: 273 AERGVQLVGTAHGNRLENLIKNPTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTF 332
Query: 352 SCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDG----SKETVEKEFFA 404
AVE++ + VH + T+D++L GR PN ++R + G + E EF A
Sbjct: 333 DIAVEMLERQRWVVHEHVAETIDSLLRGRQPNPQVRTINDVGKVVITHELSSDEFVA 389
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 111/184 (60%), Gaps = 22/184 (11%)
Query: 438 PNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
PN GED L+ LY YG+ + Q+++ L + V LT +I ADA+LAL S +K
Sbjct: 491 PN-GED------LLYLYPYGVSRHQLEQVVRTLNL--PVLLTKDIDNADAVLALRSHVKN 541
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLS------- 550
+S ++ AKS IPI+ K SS+ QI + LR ++D D + + +NL
Sbjct: 542 HSKLRQIAKSRQIPIHTIKASSIPQIARGLRRMLD-----MDDPGNPEAVNLDLFIQGDN 596
Query: 551 -EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARL 609
++I+ALEEAR+A+EQ+VIP+G+ VELLPR + + +Q +L+ Y L + G+EP+ RL
Sbjct: 597 DDEIEALEEARLAVEQIVIPRGQPVELLPRSANVRKMQHELVEHYHLKSRSFGEEPNRRL 656
Query: 610 RILP 613
RI P
Sbjct: 657 RIYP 660
>gi|320159578|ref|YP_004172802.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
gi|319993431|dbj|BAJ62202.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
Length = 538
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/552 (41%), Positives = 336/552 (60%), Gaps = 30/552 (5%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD + L+ +LP + V +L+E+VMDLGRKP+ARF +GD L + ++
Sbjct: 6 ITDDLHV----LMGVLPPRIAEAVQNANNSDQLLEIVMDLGRKPVARFTTGDLVLLEEEV 61
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T ++ S++G+F DNRAG+ RTLHRISAIRNR+G I+GLTCRVGRAV G+ +++QD
Sbjct: 62 THEDLDFTVSRIGEFDADNRAGLERTLHRISAIRNRRGHIVGLTCRVGRAVYGTIDIIQD 121
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L++ G S+L +G PG+GKTT++RE AR+LA KKRV+IVDTS+EIGG+GD+PHP +G A
Sbjct: 122 LIESGKSVLILGRPGIGKTTMLREAARILAE--KKRVVIVDTSNEIGGDGDVPHPAVGAA 179
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQVP +QH+V+IEAVENH P+VIVIDEIG +LEA AA TIA+RG+QL+ TAHG T+
Sbjct: 180 RRMQVPKPSLQHEVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAHGRTL 239
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENL++NP+L L+GG++ VTL DEEA RRG QKTVLER+ P TF +EI + L +H
Sbjct: 240 ENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQERDRLAIHP 299
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ A VDA++ EIR +G+ VEK + + M ++E
Sbjct: 300 DVAAAVDALVRNNPLPPEIRYRDAEGNIH-VEKPPAQPAARNGYGAMQAGFRRLMSEPAG 358
Query: 428 GKI--------QFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLT 479
G+ + + P ++ + + IR+Y YG+ + Q K+L + +
Sbjct: 359 GRASETAYSHREEMESEPRSMRTERLQP---IRIYPYGVARNRLQQGAKRLGV--PALIV 413
Query: 480 DNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFK 539
++EAD L+ L + + A+ +PIY + ++ QI + L L +
Sbjct: 414 RELAEADVLITLRAYYRSRQQTILEAEQRGMPIYVLRANTNTQIEQLLAELFN------L 467
Query: 540 DLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQ 599
++ ED +L I + + AI Q+V+ V+L P + I +Q ++ R+YQL
Sbjct: 468 SMQPEDGEDLEATI---AQTQAAI-QMVMNGERYVDLAPASAAIRRMQHEMARQYQLTSH 523
Query: 600 RVGKEPDARLRI 611
GKEP+ R+RI
Sbjct: 524 SYGKEPNRRVRI 535
>gi|189095330|ref|YP_001936343.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157694673|gb|ABV65949.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157777904|gb|ABV70090.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
Length = 451
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/455 (45%), Positives = 289/455 (63%), Gaps = 18/455 (3%)
Query: 73 DIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
D +L +L + P +RI + H LIEVV+DLG+KP RF G LS+ ++ +
Sbjct: 4 DEDLTKLFQVFPNYLRIAIQYHSNRLNLIEVVLDLGKKPEGRFFDGTSYLSNRIVSWQDL 63
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+ T QV +F DNRAGI RTLHRIS +RNRKG IIGLTCRVGR++ G+ ++++DL+
Sbjct: 64 DFCTKQVSNFNDDNRAGIERTLHRISCLRNRKGVIIGLTCRVGRSLFGTVSIVRDLLSSN 123
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+L +G PGVGKTT IREIAR+L+++ +KRV+IVDTS+EIGGN DIPH GIG ARRMQV
Sbjct: 124 QSILILGKPGVGKTTTIREIARILSDELRKRVVIVDTSNEIGGNSDIPHSGIGRARRMQV 183
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
SE+QH V++EAVENHMP+VI++DEIGT LE +A TIA+RG+Q++ T HG +ENLI
Sbjct: 184 SKSELQHNVMVEAVENHMPEVIIVDEIGTDLEVLAVRTIAERGVQVIGTVHGNNLENLIK 243
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP L ++GGVQNV LGDEEA +RG QK VLERK P +F A+EI K VH ++ +
Sbjct: 244 NPILMDIVGGVQNVILGDEEAKKRGTQKNVLERKAPPSFQIAIEINQKMNWFVHENITQS 303
Query: 373 VDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQF 432
VD +L + P ++ R++ + SK ++ + +++ E RT K +
Sbjct: 304 VDRLLQKQFPYLQSRKITKN-SKISIYQN---------------KNSRYSLENRTTKSKL 347
Query: 433 ISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALH 492
I + ++ + +Y Y I V Q+ + ++ T +I++A A+LAL
Sbjct: 348 ILNSDQDETTTLLKNSQQVSIYSYSISINKVQQISESFGF--SLFFTKDINKATAILALK 405
Query: 493 SKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKAL 527
S + +N + AKS IPIY K ++ QI K L
Sbjct: 406 SYINENQKLLTMAKSKKIPIYTVKKNTAPQIAKIL 440
>gi|209525857|ref|ZP_03274392.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|376002076|ref|ZP_09779925.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062006|ref|ZP_17050796.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
gi|209493666|gb|EDZ93986.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|375329564|emb|CCE15678.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406716579|gb|EKD11728.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
Length = 592
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/334 (58%), Positives = 253/334 (75%), Gaps = 1/334 (0%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L RLL ++P +R + HPE LIE+VMDLGR P ARFPS LS +T + H
Sbjct: 6 DLNRLLDIVPPTVRKNLINHPERECLIEIVMDLGRLPEARFPSNAEYLSQQPVTWDDLGH 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
S++G+F+ DNRAGI +TLHRISAIRNR G IIGLTCRVGRAV G +++DLV+ G S
Sbjct: 66 CISRIGEFSGDNRAGIEKTLHRISAIRNRTGKIIGLTCRVGRAVFGKIGMIRDLVETGGS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTT +REIARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TI++RG+QL+ TAHG IENL+ NP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAHGNRIENLMKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L LIGG+Q VTLGD+EA RRG QKTVLERK P TF A+E++ + VH S+ TVD
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERWVVHESVSTTVD 305
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSS 408
+L G P +++R+M +D + TV +E ++ ++
Sbjct: 306 GLLRGMQPTLQVRQM-NDRGEVTVTQERYSTPAA 338
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 6/179 (3%)
Query: 439 NIGEDCW-EDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
++G++ + ED L + +Y Y I + Q+I+ L + V +T +I AD +LAL S ++
Sbjct: 415 DLGDNGFNEDDLPLHIYPYAIARYQIDQVIRTLML--PVVVTKDIDSADVVLALRSHIRN 472
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKID 554
S ++ AK+ IPI+ K+ S QI KAL L+ D T E DL N S++++
Sbjct: 473 QSKLRQMAKNRHIPIHTVKSGSPPQIAKALHRLLHRSDPSTPEVPDLTLFASGNSSDELE 532
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
ALEEAR+A+E++VIPKG+ VELLPR + +Q +L+ Y+L G+EP+ R+RI P
Sbjct: 533 ALEEARLAVEEIVIPKGQPVELLPRSPKVRKMQHELVEHYRLKSNSFGEEPNRRIRIYP 591
>gi|307106236|gb|EFN54482.1| hypothetical protein CHLNCDRAFT_135149 [Chlorella variabilis]
Length = 581
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/343 (57%), Positives = 260/343 (75%), Gaps = 8/343 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
E+ +L+ LLP +R ++ +HPEL +L+EVVMDLGR PLARFP GD L++ ++ +++
Sbjct: 21 EVLKLVHLLPPAVRQQLRQHPELPQLLEVVMDLGRPPLARFPGGDVRLAEAAVSPEDLQY 80
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
A QVG+F DNRAGI +TLHRIS IRNR G ++GLTCRVGRA+SGSA ++ DL +DG S
Sbjct: 81 AVRQVGEFGGDNRAGIDKTLHRISCIRNRAGRVVGLTCRVGRAISGSAAMVADLARDGKS 140
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ--- 251
+L +G PGVGKTT IREI+R+LA++ ++RV++VDTS+EIGG+GDIPHPGIG ARRMQ
Sbjct: 141 VLLLGRPGVGKTTAIREISRLLADECQRRVVVVDTSNEIGGDGDIPHPGIGGARRMQARA 200
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP+ E QH+V+IEAVENHMP IVIDEIGT+ E +AA TIAQRG+QLVATAHG +EN++
Sbjct: 201 VPHPEQQHRVMIEAVENHMPSTIVIDEIGTEAECLAARTIAQRGVQLVATAHGNELENVV 260
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
NPSL L+GG+ +VTLGD+EA RRGVQK+VLER+ P TF VE+VS+ + RVH L+A
Sbjct: 261 KNPSLNDLVGGIASVTLGDDEAKRRGVQKSVLERQSPPTFDACVEMVSREQWRVH--LDA 318
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAE-TSSDEEDE 413
++S R V +RR + E+ + + E +D EDE
Sbjct: 319 APALLVSHR--TVLLRRAEVRERDESGKVWSWPEGGGTDSEDE 359
>gi|383761637|ref|YP_005440619.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381905|dbj|BAL98721.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 542
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 325/550 (59%), Gaps = 42/550 (7%)
Query: 81 ALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVG 140
A+LPE +R + + LIEV+MDLGR P ARF G+ LSD ++T + +VG
Sbjct: 15 AVLPERIRRALEQSERKENLIEVIMDLGRLPEARFTDGEMVLSDQEVTREDLNRVVERVG 74
Query: 141 DFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGP 200
DF DNRAGI RTLHRISAIRNRKG +IGLTCRVGRAV G+ +++D+V S+L +G
Sbjct: 75 DFGADNRAGIERTLHRISAIRNRKGDVIGLTCRVGRAVYGAIEIIKDIVNSDRSILLLGR 134
Query: 201 PGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK 260
PGVGKTT++RE AR+ + KRV+IVDTS+EI G+GDIPHP IG +RRMQVP+ +QH+
Sbjct: 135 PGVGKTTLLREAARLRSE--VKRVVIVDTSNEIAGDGDIPHPAIGRSRRMQVPDPSLQHE 192
Query: 261 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++IEAVENHMP+VI+IDEIG + EA+AA TIA+RG+QL+ TAHG ++ENL+MNP+L L+
Sbjct: 193 LMIEAVENHMPEVIIIDEIGREQEAIAARTIAERGVQLIGTAHGNSLENLLMNPTLSDLV 252
Query: 321 GGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGR 380
GG+++VTL DEEA RRG QK+VLER+ P TF +EI + L +HH + VDAIL GR
Sbjct: 253 GGIESVTLSDEEARRRGTQKSVLERRAPPTFDVLIEIKDRQHLVIHHDVAQAVDAILRGR 312
Query: 381 --IPN---------VEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGK 429
IP + +RR++ +F E E++ E T
Sbjct: 313 ELIPEERFVDEQGVIHVRRLETTPE----HSDFSGRLRRKREREIVGEPFARETNGHPYT 368
Query: 430 IQFISEFPPNIGEDCWEDGL---LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEAD 486
+ + P+ D + L IR+Y YG+ + + L + +Q+ DN++ AD
Sbjct: 369 GEIDAAGAPHKDRDAAPELLKRSTIRIYPYGVGQNRLRAAATALNV--PLQIVDNLNIAD 426
Query: 487 ALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDK 546
A++ L + ++ A+ IP+Y ++++ Q+ + L D
Sbjct: 427 AVMTLKNYYRQQPAPIQEAERRGIPVYILRSNTTAQMEQIL----------------VDI 470
Query: 547 INLS-EKIDALEEARVAIE---QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVG 602
N++ + IDA EEA + Q V+ V L P+ + I S Q L+R L G
Sbjct: 471 FNIAVDPIDAFEEAMRETQEGIQRVLNGASDVTLSPQSAAIRSQQHQLVRAANLISHSYG 530
Query: 603 KEPDARLRIL 612
+EP R+RI
Sbjct: 531 REPYRRVRIF 540
>gi|452821468|gb|EME28498.1| [pt] hypothetical protein [Galdieria sulphuraria]
Length = 493
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/513 (42%), Positives = 319/513 (62%), Gaps = 28/513 (5%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MDLG+KP ARF + +S+ I I + ++G F VDNR GI TLHRIS+I NR+
Sbjct: 1 MDLGKKPEARFSDHVYYISNKNINWQDINYCIRRLGKFNVDNRTGIKNTLHRISSINNRE 60
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
G ++GLT RVGRAV G+ N+++DL++ G S+L +G PGVGKTT IREIAR+LA++ KRV
Sbjct: 61 GQVVGLTYRVGRAVLGNINIIRDLLEIGHSILILGKPGVGKTTAIREIARILADEIGKRV 120
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+I+DTS+EI G+ DI H IG ARRMQV + ++QH+V+IEA+ENHMP+VI+IDEI T+LE
Sbjct: 121 IIIDTSNEIAGDSDIGHFSIGRARRMQVKHPQLQHQVMIEAIENHMPEVIIIDEISTELE 180
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A+AA TIA+RG+QL+ TAHG ++ENLI N +L LIGG+Q VTLGDEEA +RG QK++LE
Sbjct: 181 AIAARTIAERGVQLIGTAHGNSLENLIRNFTLSDLIGGIQYVTLGDEEARKRGTQKSILE 240
Query: 345 RKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA 404
RK TF+ +EI R+H +E VD IL G P ++ R + D +K ++ ++
Sbjct: 241 RKSFPTFNIVIEIHQLYSWRIHQDVEQNVDRILQGSRPILQDRFISLD-NKHIIK---YS 296
Query: 405 ETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGEDCWEDGLLIR----LYVYGILE 460
+ +++ E+ K+ I E ++ + + I LY++ +
Sbjct: 297 QYNNN-----------EIINSNKSKLHSIKEHSNHLLHELVNKNMNINHKIYLYLHSLSY 345
Query: 461 ATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSL 520
I +Q+ + LT ++ A+A+L L + K ++ AK+ IPIY ++
Sbjct: 346 KETQSCIDNMQL--PIILTKSLDNANAILGLRIQTKNTPKLREIAKNKKIPIYVISNETI 403
Query: 521 VQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRP 580
Q+ K L+ +I+ + +FK + I D+L+E R+AI +V+ K ++VELLPR
Sbjct: 404 PQLIKVLKNIINSY--DFKKVYKNTHI-----FDSLKEMRMAILNIVLSKNQTVELLPRI 456
Query: 581 SYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+YI Q L + L+ VGKEP RLRI P
Sbjct: 457 AYIRKYQHILAGYFNLYAISVGKEPFRRLRIYP 489
>gi|118411121|ref|YP_874515.1| hypothetical protein ThpsCp026 [Thalassiosira pseudonana]
gi|224015786|ref|XP_002297541.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
gi|116739868|gb|ABK20738.1| conserved hypothetical protein [Thalassiosira pseudonana]
gi|220967805|gb|EED86181.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
Length = 454
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/465 (44%), Positives = 303/465 (65%), Gaps = 17/465 (3%)
Query: 71 DFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ D +L +LL LP + ++ H +LIE+V+DLGR+P ARF +G LS I+
Sbjct: 2 NIDDDLEKLLNNLPFFIYHHLNTHANKEKLIEIVLDLGRRPEARFTTGPEYLSQKIISWQ 61
Query: 131 HIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQ 190
I++ T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGRA+ G+ ++++DL++
Sbjct: 62 DIDYMTKRISKFSGENRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTISIIRDLLE 121
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
G S+L +G PGVGKTTIIREIARVL+++ +KRV+I+DTS+EI G+ D+PH GIG ARRM
Sbjct: 122 SGKSILILGRPGVGKTTIIREIARVLSDEMEKRVIIIDTSNEIAGDSDVPHSGIGRARRM 181
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QVP +E+QHK+++EA+ENHMPQVIVIDEIGT+LEA+AA TIA++G+QLV T HG +ENL
Sbjct: 182 QVPKTELQHKIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENL 241
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
I NPSL LIGG+Q VT+ DEEA RRG QK++LERK F A+E+ S + ++ ++E
Sbjct: 242 IKNPSLSDLIGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAIEVNSLSSWTIYENVE 301
Query: 371 ATVDAILSGRIPNVEIRRMQHDG----SKETVEKEFFAETSSDEEDEMMVEDAMEVTEER 426
+VD IL G +IR ++ + + + +K+F + S EM+
Sbjct: 302 NSVDLILRGNFHIAQIRNLKKNEKLIINYKKFQKDFLIKNSRFLNKEMI----------S 351
Query: 427 TGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEAD 486
K F+ P I ++ LI +Y Y + + + +++ +Q D + T I++A+
Sbjct: 352 IHKNWFLVNEPKRIRSLNLKNTTLI-IYPYSLSKNLIREML--IQFGDKIIFTTQINQAN 408
Query: 487 ALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI 531
++ L L++N +++ A +IPIY S+ QI + L+ I
Sbjct: 409 LIIGLKKHLRQNFRLKSLANKQNIPIYTINQRSIYQIMRLLQFFI 453
>gi|292490546|ref|YP_003525985.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nitrosococcus halophilus Nc4]
gi|291579141|gb|ADE13598.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus halophilus Nc4]
Length = 500
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/539 (42%), Positives = 329/539 (61%), Gaps = 48/539 (8%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +L+ +LP +R + P+ + L+E++MD+GR P ARF +LS ++ +E
Sbjct: 9 DLQQLIGILPRSLRTVLQGLPQQH-LLEIIMDVGRSPQARFSGQTVNLSADPVSPADLEQ 67
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
+ VG+F+ DNRAGI TLHRIS +RNR+G IIGLT RVGRAV+G+ + ++DL++ GAS
Sbjct: 68 VVASVGEFSADNRAGIEGTLHRISCLRNRRGKIIGLTLRVGRAVTGTIDSIRDLIERGAS 127
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LL +G PGVGKTT +REIARVLA+++ KRV+I+DTS+EI G+GDIPHP IG+ARRMQVP+
Sbjct: 128 LLLLGRPGVGKTTRLREIARVLADEFGKRVIIIDTSNEIAGDGDIPHPAIGSARRMQVPH 187
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
E QH V+IEAVENHMP+VI++DEIGT EA AA TIA+RG+QL+ TAHG T+ENL+MNP
Sbjct: 188 PERQHGVMIEAVENHMPEVIIVDEIGTGAEATAARTIAERGVQLIGTAHGNTLENLVMNP 247
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GGVQ VTLGD+EA RG QKT+ ERK P TF VEIV + + VH VD
Sbjct: 248 TLADLVGGVQTVTLGDDEARLRGTQKTINERKAPPTFDAVVEIVDREAVIVHPDTAGAVD 307
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFIS 434
+L G P IRR E F E +E V
Sbjct: 308 KLLRGLDPG-GIRRSPQG------EVVFLPEEPPPQESPRQVS----------------- 343
Query: 435 EFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSK 494
I + W +R++ Y + TV ++I+ L+++ + +AD +LAL S+
Sbjct: 344 ----TINQTGW-----VRIHPYALSRDTVERVIRDLRLE--ARTVKRPDQADFILALRSR 392
Query: 495 LKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKID 554
+++ ++ ++ +P+Y K ++ QI + L+ + + G +D E
Sbjct: 393 -AEDARLRRILQATQLPLYVVKKNTTAQIRRLLQNVFNILHGMPRD----------EVDA 441
Query: 555 ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
A+ EA AI++ V+ +G +V LLPRP+ + +Q L +++L + VG EP L I P
Sbjct: 442 AVGEAEAAIKR-VMEEGVTVALLPRPASMRKLQHRLAARHRLTAESVGSEPQRHLIIHP 499
>gi|374851690|dbj|BAL54642.1| single-stranded nucleic acid binding R3H [uncultured Chloroflexi
bacterium]
Length = 517
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/549 (41%), Positives = 328/549 (59%), Gaps = 43/549 (7%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D LLA+LP ++R V + + L+EV++DLGR P ARF + L + ++
Sbjct: 6 ITDDLDA----LLAVLPADIRHAVEQADDSDNLLEVILDLGRVPTARFVDREVVLREREV 61
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T IE+ ++VG+F DNRAGI RTLHRISAIRNR+G I+GLT RVGRAV G++++++D
Sbjct: 62 TREEIEYVDARVGEFDADNRAGIERTLHRISAIRNRRGHIVGLTLRVGRAVYGTSDIIED 121
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
++ G S+L +G PGVGKTT++RE AR+LA +RV+IVDTS+EIGG+GD+PHP IG A
Sbjct: 122 IITSGKSILLLGRPGVGKTTLLREAARILAE--TRRVIIVDTSNEIGGDGDVPHPAIGKA 179
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV +QH+V+IEAVENH P+VIVIDEIG +LEA AA TIA+RG+QL+ TAHG T+
Sbjct: 180 RRMQVREPMLQHEVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAHGNTL 239
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENL++NP+L L+GG++ VTL DEEA RRG QKTVLER+ P TF +EI ++ L +H
Sbjct: 240 ENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQNRDRLAIHM 299
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ VDA+L GR EIR + DG + +E+ +E
Sbjct: 300 DVATAVDALLRGRPIPPEIRIREPDG-RIRIERSVLQPAEP---------------QESP 343
Query: 428 GK----IQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNIS 483
G+ I+ S FP IR+Y YG+ ++Q K+L + L +
Sbjct: 344 GRSPLPIESASAFPAGSAALAP-----IRIYPYGVARNRLMQAAKRLGV--PAILVRSAE 396
Query: 484 EADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRS 543
EA AL+ L + + + A+ +PIY +++++ QI + L L + E
Sbjct: 397 EAQALVTLRTYYRTHQHTILEAEERGVPIYVLRSNTVNQIEQFLTDLFHLPSDELP---- 452
Query: 544 EDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGK 603
+ +++A+ + Q V+ V+L P P+++ +Q ++ R+ L GK
Sbjct: 453 ------AHEMEAIRQQTEQAIQTVLNGERWVDLPPAPAFVRRLQHEMARQADLVSHSYGK 506
Query: 604 EPDARLRIL 612
EP +RI
Sbjct: 507 EPRRHVRIF 515
>gi|110740513|dbj|BAE98362.1| hypothetical protein [Arabidopsis thaliana]
Length = 449
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/483 (45%), Positives = 311/483 (64%), Gaps = 72/483 (14%)
Query: 215 VLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARRMQVPN +QH V+IEAVENHMP+ I
Sbjct: 1 MLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETI 60
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAH 334
+IDEIGT+LEA+AASTIAQRG+QLVATAHG+TI+N+I NPSL++LIGG+++VTLGDEEA
Sbjct: 61 IIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEAR 120
Query: 335 RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGS 394
+R VQKT+LERKGP TF+CAVE++S+TE RVH L+ TVDAIL+G+ EIR+++ +
Sbjct: 121 KRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQIRGE-- 178
Query: 395 KETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKI---QFISEFPPNIGEDCWEDGLLI 451
D +++ +E EE + F+SE + +D ED LLI
Sbjct: 179 -------------DDVPHKLVTPIPLENLEEEPAPLLNRDFVSEL---LSDDEDEDFLLI 222
Query: 452 R------------------LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHS 493
R +Y Y +LEA ++Q+ + + +DD +++TD++ EAD +LA S
Sbjct: 223 RSNKARSNTYTSPRSSPVHVYTYNVLEADLLQVAEVMGLDDEIEVTDDVGEADVILASSS 282
Query: 494 KLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL-----------------IDDHTG 536
+LK+NS I+ AK H +PI+ K++++ Q+ KA+R + +DD
Sbjct: 283 ELKQNSSIRRVAKLHKLPIFVIKSTTMAQMVKAVRMILGRESFGSAPKAIEKSSVDDI-- 340
Query: 537 EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQL 596
E KD E K +L E++DALEE R+AIE +VIP GE VELLPR S I+ Q++L+ YQL
Sbjct: 341 EIKDDAPESKPSL-EELDALEEVRLAIEYIVIPGGEPVELLPRRSDIIVRQLELVESYQL 399
Query: 597 HYQRVGKEPDARLRILPFQTRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPF 656
+ +G + RL+ILP ++ + +S S+ S GT T RLPF
Sbjct: 400 AVENLGTHLNPRLQILPRRSTKKTLTSSSPQ-----------KSADGSMGTTGT--RLPF 446
Query: 657 LPD 659
L D
Sbjct: 447 LKD 449
>gi|254423701|ref|ZP_05037419.1| R3H domain protein [Synechococcus sp. PCC 7335]
gi|196191190|gb|EDX86154.1| R3H domain protein [Synechococcus sp. PCC 7335]
Length = 665
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 245/326 (75%)
Query: 62 SRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS 121
S+ +YS +L +LL +LP +R ++ H LIEVV+DLGR+P ARFP
Sbjct: 31 SKSAYSKPQAVTDDLPQLLEILPAYIRDQLESHSRRDHLIEVVLDLGRQPEARFPDAVQY 90
Query: 122 LSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
LS+ ++ ++H +VG F DNRAG+ TLHRISA+RNRKG +IGLTCRVGRAV G+
Sbjct: 91 LSEAPVSKADLQHCIDRVGHFGGDNRAGLEETLHRISAMRNRKGDVIGLTCRVGRAVFGT 150
Query: 182 ANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPH 241
+++DLV+ G S+L +G PGVGKTT +REIARVLA+D KRV+I+DTS+EI G+GDIPH
Sbjct: 151 ITMIRDLVETGNSILMLGRPGVGKTTALREIARVLADDLMKRVVIIDTSNEIAGDGDIPH 210
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
P IG ARRMQV + E QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV T
Sbjct: 211 PAIGRARRMQVSHPEKQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGT 270
Query: 302 AHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKT 361
AHG +ENLI NP+L L+GG+Q+VTLGD+EA RRG QK+VLERK P TF AVE++ +
Sbjct: 271 AHGNRLENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQ 330
Query: 362 ELRVHHSLEATVDAILSGRIPNVEIR 387
VH + +TVD IL G++P ++R
Sbjct: 331 RWVVHEDVSSTVDFILRGQVPGQQVR 356
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 12/182 (6%)
Query: 440 IGEDCWEDGL--LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKK 497
+G+D +E G + R+Y YGI + +++ L D V+ T ++ ADA+LAL S ++
Sbjct: 487 VGDDFYEVGEDDVTRVYAYGISRQQLDHVVRTL--DLPVKFTKELASADAVLALRSHIRN 544
Query: 498 NSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHT-GEFK-----DLRSEDKINLSE 551
+S ++ AK+ +P+Y K++S+ QIT++LR L+D GE DL +++ + +
Sbjct: 545 HSKLKQVAKARQLPVYTVKSNSIPQITRSLRRLLDLDDDGEMAEGVNLDLFAQNGAD--D 602
Query: 552 KIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
+++ALEEAR+A+EQ+VIPK + VELLPR I +Q +L Y+L G EP+ RLRI
Sbjct: 603 ELEALEEARLAVEQIVIPKSQPVELLPRSPKIRKMQHELAEHYRLKSLSFGDEPNRRLRI 662
Query: 612 LP 613
P
Sbjct: 663 YP 664
>gi|428218066|ref|YP_007102531.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427989848|gb|AFY70103.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
Length = 623
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 246/325 (75%), Gaps = 1/325 (0%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
+LLA+LP +R + + ++ +L+EVV+DLGR P AR+ S LSD +T I+
Sbjct: 15 QLLAILPPHIRENLEQKKQIDDLVEVVLDLGRPPEARYTSAAVYLSDTPVTQADIDACVD 74
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
+VG+F DNRAGI RTLHRISAIRNR+G +IGLTCRVGRAV G++ +++DLV+ G S+L
Sbjct: 75 RVGEFGGDNRAGIERTLHRISAIRNRRGKVIGLTCRVGRAVYGTSEMIRDLVETGKSILI 134
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PG+GKTT +RE+ARVLA++ KRV+I+DTS+EI G+GDIPHP IG ARRMQV E+
Sbjct: 135 MGRPGMGKTTALREVARVLADEMDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAKPEL 194
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH+V++EAVENHMP+VI+IDEIGT+LEA+AA TIA+RG+QLV TAHG + NLI NP+L
Sbjct: 195 QHQVMVEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNKLANLIKNPTLS 254
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
LIGG+Q+VTLGD+EA RRG QK++LERK P TF A+E+ + VH + +T+D +L
Sbjct: 255 DLIGGIQSVTLGDDEARRRGTQKSILERKAPPTFEIAIEMGERYRWAVHEDVTSTIDGLL 314
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEF 402
GR P ++IR + G K T+ E
Sbjct: 315 RGREPALQIRALDEVG-KLTITNEL 338
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 15/169 (8%)
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
+Y+YG+ Q+I L++ V T +I AD +LAL S ++ NS I+ A S +PI
Sbjct: 461 VYLYGVSRHQAEQVIATLKLPAIV--TKDIDSADVVLALRSHVRNNSKIRNLATSRQVPI 518
Query: 513 YATKTSSLVQITKALR--------ALIDDHTGEFKDLRSEDKINLSEKIDALEEARVAIE 564
+A K+S++ QIT+ALR A +D+H DL+ + ++++ALEEAR+A+E
Sbjct: 519 HAVKSSTISQITRALRRILQIDEPAQVDEH-----DLQLFAYGDSEDEMEALEEARLAVE 573
Query: 565 QVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
Q+VIPKG+ VELLPR I +Q +L+ Y L G EP+ RLRI P
Sbjct: 574 QIVIPKGQPVELLPRSPIIRKMQHELVEHYHLKSNSFGNEPNRRLRIYP 622
>gi|302811106|ref|XP_002987243.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
gi|300145140|gb|EFJ11819.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
Length = 403
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 252/335 (75%), Gaps = 4/335 (1%)
Query: 80 LALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPS--GDFSLSDCQITVHHIEHATS 137
L +LPE +R + +HP+ +L+EVV+DLGR+P ARF G L D +IT ++ A +
Sbjct: 11 LQILPEGIRQNLLKHPKRGDLLEVVLDLGRRPEARFLKHRGGEYLRDNEITRDDLQAAEA 70
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
VG+F DNRAGI TLHRISAIRNRKG IIGLTCRVGRAV+G ++++DL+ G S+LF
Sbjct: 71 AVGEFGSDNRAGIEGTLHRISAIRNRKGVIIGLTCRVGRAVTGHVDMVRDLLDCGKSILF 130
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PGVGKTT+IREIARVLA+D +KRV++VDTS+EIGG+GD+PHP IG ARRMQVP+ M
Sbjct: 131 LGRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSM 190
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH+V++EAVENHMPQV+++DEIGT+ EA+A TIA+RG+ LVATAHG T+EN+I NP+L
Sbjct: 191 QHRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLS 250
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L+GG+Q VTLGD+EA RG QKTVLERK P TFS +E+ ++ H S + +VD +L
Sbjct: 251 DLVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQS-DKSVDNLL 309
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEED 412
G+ P VE+ R + + + +EK + + + D
Sbjct: 310 QGKQPVVEM-RTRDENFRVVIEKRLYDKEEHERSD 343
>gi|302789283|ref|XP_002976410.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
gi|300156040|gb|EFJ22670.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
Length = 403
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 252/335 (75%), Gaps = 4/335 (1%)
Query: 80 LALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPS--GDFSLSDCQITVHHIEHATS 137
L +LPE +R + +HP+ +L+EVV+DLGR+P ARF G L D +IT ++ A +
Sbjct: 11 LQILPEGIRQNLLKHPKRGDLLEVVLDLGRRPEARFLKHRGGEYLRDNEITRDDLQAAEA 70
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
VG+F DNRAGI TLHRISAIRNRKG IIGLTCRVGRAV+G ++++DL+ G S+LF
Sbjct: 71 AVGEFGSDNRAGIEGTLHRISAIRNRKGVIIGLTCRVGRAVTGHVDMVRDLLDCGKSILF 130
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PGVGKTT+IREIARVLA+D +KRV++VDTS+EIGG+GD+PHP IG ARRMQVP+ M
Sbjct: 131 LGRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSM 190
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH+V++EAVENHMPQV+++DEIGT+ EA+A TIA+RG+ LVATAHG T+EN+I NP+L
Sbjct: 191 QHRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLS 250
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L+GG+Q VTLGD+EA RG QKTVLERK P TFS +E+ ++ H S + +VD +L
Sbjct: 251 DLVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQS-DKSVDNLL 309
Query: 378 SGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEED 412
G+ P VE+ R + + + +EK + + + D
Sbjct: 310 QGKQPVVEM-RTRDENFRVVIEKRLYDKEEHERSD 343
>gi|300115498|ref|YP_003762073.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299541435|gb|ADJ29752.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus watsonii C-113]
Length = 496
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/544 (42%), Positives = 331/544 (60%), Gaps = 50/544 (9%)
Query: 72 FDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
F+ +L LLA+LP +R + P ++L+EV+MD+GR P ARF +L+ ++
Sbjct: 2 FNADLQSLLAVLPPVLRAALQGLPT-HQLLEVIMDVGRPPQARFSGRAVNLTTDPVSPAD 60
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
+E + VG+F+ DNRAGI TLHRI+ +RNR+G IIGLT RVGRA++G+ + +QDL++
Sbjct: 61 LERVVALVGEFSADNRAGIEGTLHRIACLRNRRGEIIGLTLRVGRAIAGTIDFIQDLIER 120
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
+LL +G PGVGKTT +REIARVLA+++ KRV+IVDTS+EIGG+GDIPHP IG+ARRMQ
Sbjct: 121 EVNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARRMQ 180
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
V + E QH V+IEAVENHMP+VIV+DEIGT EAMAA TIA+RG+QL+ TAHG T+ENL+
Sbjct: 181 VAHPEQQHGVMIEAVENHMPEVIVVDEIGTTSEAMAARTIAERGVQLIGTAHGNTLENLV 240
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
MNP+L LIGGVQ VTLGD+EA R QKT+ ERK TF+ VEIV++ + VH +
Sbjct: 241 MNPTLADLIGGVQVVTLGDDEARLRRTQKTIRERKALPTFNAVVEIVNREIMMVHPDTAS 300
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQ 431
VD +L G P IRR + EK E++ E + G
Sbjct: 301 AVDKLLRGLDPG-GIRRSPQGEEILSPEKSPLPESAKPVS-----------VENQAG--- 345
Query: 432 FISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLAL 491
LIR++ Y + TV ++I+ L+++ + N +AD ++AL
Sbjct: 346 ------------------LIRIHPYALSRDTVERVIRDLRLE--ARAVKNPEQADFIIAL 385
Query: 492 HSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSE 551
S+ +++ ++ + +P+Y K ++ QI + L+ +++ G KD
Sbjct: 386 RSR-AEDARLRRLLQVTRVPLYVVKKNTTAQIRRLLQNVLNILHGVPKD----------- 433
Query: 552 KID-ALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLR 610
++D A+ EA AI++ V+ +G + L PR + I +Q L ++ L + VG EP L
Sbjct: 434 EVDIAVSEAEAAIKR-VMKEGVTATLQPRTAAIRELQHRLAVRHHLLAESVGSEPQRHLI 492
Query: 611 ILPF 614
I P
Sbjct: 493 IYPV 496
>gi|302832762|ref|XP_002947945.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
gi|300266747|gb|EFJ50933.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
Length = 366
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/312 (60%), Positives = 240/312 (76%), Gaps = 5/312 (1%)
Query: 80 LALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF---PSGDFSLSDCQITVHHIEHAT 136
L LLPE++R + HP+ L+EVV+DLGR+P ARF P+G++ L ++T +E A
Sbjct: 18 LQLLPEDIREPLVNHPQRASLVEVVLDLGRQPEARFEGIPAGEY-LRKQEVTTADLEAAV 76
Query: 137 SQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL 196
+ VG+F DNRAG+ TLHRISAIRNR+G IIGLTCRVGRAVSG +L+DLV+ G S+L
Sbjct: 77 AAVGEFGADNRAGVPGTLHRISAIRNRRGIIIGLTCRVGRAVSGHIAMLKDLVESGHSVL 136
Query: 197 FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE 256
+G PGVGKTT+IREI R LA++Y+KRV+IVDTS+EIGG+GD+PHP IG ARRMQV ++
Sbjct: 137 LLGRPGVGKTTVIREICRTLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVADAT 196
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
QH V+IEAVENHMPQV+V+DEIGT+ EA+A TIA+RG+QL+ TAHG +ENLI NP+L
Sbjct: 197 QQHGVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNPTL 256
Query: 317 EMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAI 376
L+GGV VTLGDEEA RG QKT+LERK P TF VEI ++ V H +E +VD +
Sbjct: 257 ADLVGGVAAVTLGDEEARTRGTQKTILERKAPPTFPIVVEIRARN-FYVAHWVEDSVDQL 315
Query: 377 LSGRIPNVEIRR 388
L GR+P V++RR
Sbjct: 316 LLGRMPVVQVRR 327
>gi|330850845|ref|YP_004376595.1| hypothetical protein FispC_p030 [Fistulifera sp. JPCC DA0580]
gi|328835665|dbj|BAK18961.1| conserved hypothetical protein [Fistulifera sp. JPCC DA0580]
Length = 456
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/465 (44%), Positives = 301/465 (64%), Gaps = 13/465 (2%)
Query: 67 SVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQ 126
+VNDD + +L+ LP ++ +++HP +LIE+V+DLGR+P ARF SG LS
Sbjct: 2 NVNDDLE----KLIDNLPVFLQEHLNQHPNKEQLIEIVLDLGRRPEARFVSGPEYLSQKI 57
Query: 127 ITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQ 186
I+ I++ T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGRAV G+ ++++
Sbjct: 58 ISWQDIDYVTKRISKFSNENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISIIR 117
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
DL++ G S+L +G PGVGKTTIIREIARVL ++ +KRV+I+DTS+EI G+ DIPH GIG
Sbjct: 118 DLLESGKSILILGKPGVGKTTIIREIARVLGDEMEKRVIIIDTSNEIAGDSDIPHSGIGR 177
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
ARRMQV +E+QH+V+IEAVENHMPQVI+IDEIGT+LE +AA TIA++G+QLV T HG
Sbjct: 178 ARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNC 237
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVH 366
+ENLI NP L LIGG+Q VTL DEEA RRG QK++LERK F +EI +T +H
Sbjct: 238 LENLIKNPPLADLIGGIQYVTLSDEEAKRRGTQKSILERKAYPAFEIIIEINDQTSWTIH 297
Query: 367 HSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFA-ETSSDEEDEMMVEDAMEVTEE 425
++ +VD+ L G +IR++ + + F + + S ++ + E VT+
Sbjct: 298 EDVKDSVDSFLRGSFLVGQIRQLSLNEKVIINSRRFQSLQNSFNKTRPNLSESGPLVTKN 357
Query: 426 RTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEA 485
F+++ I L+I Y Y + + +++ L+M+ LT+ I +A
Sbjct: 358 WA----FMNQKQNEITLKLSSKKLVI--YPYSLSNNLLKEVL--LKMEFKFVLTNEIRKA 409
Query: 486 DALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
D ++ L LK+N + A+ +IPIY+ S Q++K ++ L
Sbjct: 410 DLVIGLKKHLKQNFRLIQLAQQKNIPIYSLNEISFYQVSKLIQYL 454
>gi|444914392|ref|ZP_21234535.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
gi|444714624|gb|ELW55503.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
Length = 582
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/571 (42%), Positives = 335/571 (58%), Gaps = 40/571 (7%)
Query: 70 DDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
DDF + L+ +LPE ++ V E P E++EVVMDLGR P AR G LS+ +T
Sbjct: 14 DDFLL----LVGVLPEVLQDAVREMPP-GEVLEVVMDLGRPPEARLVGGVARLSEAPVTR 68
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+E +QVG DNRAGI RTLHR+SAIRNR+G ++GLT RVGRA+ G+ ++L+DL+
Sbjct: 69 KELEQVIAQVGSVGEDNRAGIERTLHRVSAIRNRRGKVVGLTLRVGRAIFGTIDMLKDLI 128
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
G ++L +G PGVGKTT +RE+ARVLA+D KRVM+VDTS+EIGG+GDIPHPGIG ARR
Sbjct: 129 ASGQNILLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDGDIPHPGIGGARR 188
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQV + QH V+IEAVENHMP+ I++DEIGT EA AA TIA+RG+QLVATAHG T+EN
Sbjct: 189 MQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAHGNTLEN 248
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
L++NP+L L+GGV VTL DEEA RR QKT+ ERKGP TF VE+VS+ E+RVH
Sbjct: 249 LVLNPTLSDLVGGVHTVTLSDEEARRRHTQKTITERKGPPTFDVVVEMVSRDEVRVHGDT 308
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKET-----VEKEFFAETSSDEEDEMMVEDAMEVTE 424
VD +L+G +P E R++ G E V+ A +
Sbjct: 309 AEAVDRLLAGEVPGGEQRQLV-GGQVEVKPASPVDSPRPARGAPSPARPPPPPLRPLAAP 367
Query: 425 ER--TGKIQFISEFPPNIGEDCWED------GL---LIRLYVYGILEATVVQLIKQLQMD 473
R +GK + + P E+ GL RLY + + + ++++ L +D
Sbjct: 368 SRLASGKARPAAPEAPRPESLSREEVERRHPGLRQGTTRLYAHAVSRDLLERVLRDLAVD 427
Query: 474 DAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDD 533
++ + AD +L L S+ + ++ A +P+ A K +S ++ + LR
Sbjct: 428 --AKVIGRLESADLILTLRSR-ANDPKLRKLAGKAGVPVLAIKRNSSSEMRRVLRDAFLL 484
Query: 534 HTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGES--VELLPRPSYILSIQIDLI 591
GE +E++I +A+ EA AI++V+ GES V L PRP + +Q L+
Sbjct: 485 AEGE-----NEERIR-----EAVLEAEEAIQRVL---GESVVVPLAPRPPRLRKLQHRLV 531
Query: 592 RKYQLHYQRVGKEPDARLRILPFQTRRDEPR 622
+Y L G EP L I P D PR
Sbjct: 532 SRYHLEAISHGSEPQRHLVIYPLGALVDAPR 562
>gi|77166422|ref|YP_344947.1| single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|254436235|ref|ZP_05049742.1| R3H domain protein [Nitrosococcus oceani AFC27]
gi|76884736|gb|ABA59417.1| Single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|207089346|gb|EDZ66618.1| R3H domain protein [Nitrosococcus oceani AFC27]
Length = 496
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/543 (41%), Positives = 328/543 (60%), Gaps = 48/543 (8%)
Query: 72 FDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
+ +L LLA+LP +R + P ++L+EV+MD+GR P ARF +L+ ++
Sbjct: 2 LNADLQSLLAVLPPVLRAALQGLPS-HQLLEVIMDVGRLPQARFSERAVNLATDPVSPAD 60
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
+E + VG+F+ DNRAGI TLHRI+ +RNR+G IIGLT RVGRAV+G+ + +QDL++
Sbjct: 61 LERVVALVGEFSADNRAGIEGTLHRIACLRNRRGEIIGLTLRVGRAVAGTIDFIQDLIER 120
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G +LL +G PGVGKTT +REIARVLA+++ KRV+IVDTS+EIGG+GDIPHP IG+ARRMQ
Sbjct: 121 GDNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARRMQ 180
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
V + E QH V+IEAVENHMP+VI++DEIGT EA AA TIA+RG+QL+ TAHG T+ENL+
Sbjct: 181 VSHPEQQHGVMIEAVENHMPEVIIVDEIGTTSEATAARTIAERGVQLIGTAHGNTLENLV 240
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
MNP+L L+GGVQ VTLGD+EA R QKT+ ERK TF VEIV++ + VH
Sbjct: 241 MNPTLADLVGGVQAVTLGDDEARLRRTQKTIRERKALPTFDAVVEIVNREVMIVHPDTAG 300
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQ 431
VD +L G P IRR + +K E++ E +TG
Sbjct: 301 AVDKLLRGLGPG-GIRRSPQGEEILSPKKSPLPESTKPVS-----------IENQTG--- 345
Query: 432 FISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLAL 491
LIR++ Y + TV ++I+ L+++ + N +AD ++AL
Sbjct: 346 ------------------LIRIHPYALSRDTVERVIRDLRLE--ARTVKNPEQADFIIAL 385
Query: 492 HSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSE 551
S+ +++ ++ ++ +P+Y K ++ QI + L+ +++ G +D E
Sbjct: 386 RSR-AEDARLRRLLQATRLPLYVVKKNTTAQIRRLLQNVLNILHGVPRD----------E 434
Query: 552 KIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRI 611
A+ EA AI+Q V+ +G + L PR + I +Q L ++ L + VG EP L I
Sbjct: 435 VDTAVSEAEAAIKQ-VMEEGVTAALQPRSAAIRELQHRLAVRHHLLAESVGSEPQRHLII 493
Query: 612 LPF 614
P
Sbjct: 494 HPV 496
>gi|118411037|ref|YP_874432.1| hypothetical protein PhtrCp075 [Phaeodactylum tricornutum]
gi|116739784|gb|ABK20655.1| conserved hypothetical protein [Phaeodactylum tricornutum]
Length = 454
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/469 (43%), Positives = 299/469 (63%), Gaps = 23/469 (4%)
Query: 67 SVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQ 126
SVN D D +L+ LP +R +++H +LIE+V+DLGR+P ARF +G LS
Sbjct: 2 SVNGDLD----KLIENLPAFLREHLNQHDSKDQLIEIVLDLGRRPEARFITGPQYLSQKI 57
Query: 127 ITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQ 186
I+ I++ T +V F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGRAV G+ + ++
Sbjct: 58 ISWQDIDYMTKRVSKFSNENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISAIR 117
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
DL++ S+L +G PGVGKTTIIREIARVLA++ +KRV+I+DTS+EI G+ DIPH GIG
Sbjct: 118 DLLESEKSILILGKPGVGKTTIIREIARVLADEMEKRVIIIDTSNEIAGDSDIPHSGIGR 177
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
ARRMQV +E+QH+V+IEAVENHMPQVI+IDEIGT+LE +AA TIA++G+QLV T HG
Sbjct: 178 ARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNC 237
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVH 366
++NLI NPSL LIGG+Q VTL D+EA RRG QK++LERK F +EI +++ +H
Sbjct: 238 LDNLIKNPSLADLIGGIQYVTLSDDEAKRRGTQKSILERKAYPAFEIIIEINNQSSWTIH 297
Query: 367 HSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEER 426
++ +VD L G +IR+ +E + + + + + + + ++
Sbjct: 298 EDVKTSVDLFLRGSFFVGQIRQFA------------LSEKINIKAQKFLNQQNLLLKKDS 345
Query: 427 TGKIQFISEFPPNIGEDCWEDGLLIR-----LYVYGILEATVVQLIKQLQMDDAVQLTDN 481
T + + + +I + +E L ++ +Y Y + + +++ L+M LT+
Sbjct: 346 TDNLTLLEKNWISINQSRYEKSLNLKSKTLIIYPYSLSNNLLKEVL--LKMRVKFVLTNE 403
Query: 482 ISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
I +A+ ++ L L +N + AK +IPIY+ S Q++K ++ L
Sbjct: 404 IRKANLIIGLKKHLNQNFKLTNLAKQKNIPIYSLNQVSFYQVSKLIQFL 452
>gi|159488761|ref|XP_001702371.1| hypothetical protein CHLREDRAFT_108035 [Chlamydomonas reinhardtii]
gi|158271165|gb|EDO96991.1| predicted protein [Chlamydomonas reinhardtii]
Length = 308
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 238/309 (77%), Gaps = 5/309 (1%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF---PSGDFSLSDCQITVHHIEHATSQ 138
LLPE++R + HP+ L+EVV+DLGR+P ARF P+G++ L ++T +E A +
Sbjct: 2 LLPEDIREPLVNHPQRASLVEVVLDLGRQPEARFQGIPAGEY-LRKQEVTPADLEAAVAA 60
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
VGDF DNRAG+ TLHRISAIRNR+GAIIGLTCRVGRAVSG +L+DLV+ G S+L +
Sbjct: 61 VGDFGADNRAGVPGTLHRISAIRNRRGAIIGLTCRVGRAVSGHIAMLKDLVESGHSVLLL 120
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G PGVGKTT+IRE+ LA++Y+KRV+IVDTS+EIGG+GD+PHP IG ARRMQV ++ Q
Sbjct: 121 GRPGVGKTTVIREMCATLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVADALQQ 180
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
H V+IEAVENHMPQV+V+DEIGT+ EA+A TIA+RG+QL+ TAHG +ENLI NP+L
Sbjct: 181 HAVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNPTLSD 240
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GGV VTLGDEEA RG QKT+LERK P TF VEI ++ V H +E +VD +L
Sbjct: 241 LVGGVAPVTLGDEEARLRGTQKTILERKAPPTFPIVVEIRARN-FYVAHWVEDSVDQLLL 299
Query: 379 GRIPNVEIR 387
GR+P V++R
Sbjct: 300 GRMPVVQVR 308
>gi|302848609|ref|XP_002955836.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
gi|300258804|gb|EFJ43037.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
Length = 363
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/308 (61%), Positives = 230/308 (74%)
Query: 72 FDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
D EL LL LLP +R + HP++ L+EVVMDLGR P ARFP GD LSD +T
Sbjct: 44 IDAELQLLLRLLPPTVRAVLENHPDVETLVEVVMDLGRPPSARFPGGDVLLSDRAMTAED 103
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
+E A QVG F DNR+GI TLHRIS IRNR G ++GLTCRVGRAV G+A L++DLV
Sbjct: 104 LEQAVKQVGRFDGDNRSGIDSTLHRISCIRNRAGRVVGLTCRVGRAVPGAAELVRDLVLA 163
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G S+L +G PGVGKTT +RE+ R+ A++ ++RV++VDTS+EIGG+GD+PHP IG+ARRMQ
Sbjct: 164 GRSILLLGRPGVGKTTALREVCRIAADESRRRVVVVDTSNEIGGDGDVPHPSIGSARRMQ 223
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP E QH V++EAVENHMPQVIVIDEI T E AA TIAQRG+QLV TAHG +EN+I
Sbjct: 224 VPRPEAQHDVMVEAVENHMPQVIVIDEISTLAECTAARTIAQRGVQLVGTAHGGRLENVI 283
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
NPSL L+GG+Q+VTLGDEEA RRGVQK++LER P TF AVE+ + RVH +
Sbjct: 284 KNPSLADLVGGIQSVTLGDEEARRRGVQKSILERAAPPTFDVAVELEERGRWRVHLDVGG 343
Query: 372 TVDAILSG 379
VDAIL+G
Sbjct: 344 AVDAILAG 351
>gi|315320527|ref|YP_004072583.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
gi|283569000|gb|ADB27537.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
Length = 452
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/467 (42%), Positives = 301/467 (64%), Gaps = 23/467 (4%)
Query: 71 DFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ D +L +LL LP + V H +LIE+V+DLGR+P ARF +G LS I+
Sbjct: 2 NIDDDLEKLLKNLPFFIYQHVHNHSNKEKLIEIVLDLGRRPEARFTTGPEYLSQKVISWQ 61
Query: 131 HIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQ 190
I++ T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGRA+ G+ ++++DL++
Sbjct: 62 DIDYTTRRISKFSGENRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTISIIRDLLE 121
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
S+L +G PGVGKTTIIREIAR+L+++ +KRV+I+DTS+EI G+ D+PH GIG ARRM
Sbjct: 122 SRKSILILGKPGVGKTTIIREIARILSDEMEKRVIIIDTSNEIAGDSDVPHNGIGRARRM 181
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QV +E+QHK+++EA+ENHMPQVIVIDEIGT+LEA+AA TIA++G+QLV T HG +ENL
Sbjct: 182 QVAKTELQHKIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENL 241
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
I NPSL L+GG+Q VT+ DEEA RRG QK++LERK F AVE+ + +H ++E
Sbjct: 242 IKNPSLSDLVGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAVEVNNVYSWTIHENVE 301
Query: 371 ATVDAILSGRIPNVEIRRMQHDG----SKETVEKEFFAETSSDEEDEMMV--EDAMEVTE 424
+VD IL ++ R ++ + + + ++K+F + S EM+ + E+ +
Sbjct: 302 NSVDLILRDNFTILQTRSIKKNEKLSITYKKLQKDFLTKNSWFLNREMIAIHRNWFEMYK 361
Query: 425 ERTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISE 484
P +G +++ L+ +Y Y + + + +++ +++ + V +T I +
Sbjct: 362 ------------PKTLG--SFKNTTLV-IYPYSLSKNLIREIL--VKLGNKVVITRKIKQ 404
Query: 485 ADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALI 531
A+ ++ L L++N ++ A IPIY S+ QI + L+ I
Sbjct: 405 ANLIIGLKKHLRQNFRLKNLAHQRKIPIYTINQRSIYQIMRLLQFFI 451
>gi|383459841|ref|YP_005373830.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
gi|380731791|gb|AFE07793.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
Length = 564
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/548 (44%), Positives = 328/548 (59%), Gaps = 43/548 (7%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
N+DF + L+A+LP ++ V + PE EL+EVVMDLGR P AR G LS+ +T
Sbjct: 8 NNDFAL----LVAVLPPSLQEAVRQLPE-AELLEVVMDLGRPPEARLVHGVARLSEAPVT 62
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
++ + VG+ DNRAGI RTLHR+SAIRNR+G ++GLT RVGRA+ G+ ++L+DL
Sbjct: 63 QEALQAVLAHVGEVGGDNRAGIERTLHRVSAIRNRQGRVVGLTLRVGRAIQGTIDMLRDL 122
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
V+ G +LL +G PGVGKTT +RE+ARVLA+ KRVM+VDTS+EIGG+GDIPHPGIG AR
Sbjct: 123 VESGRNLLLLGRPGVGKTTKLREVARVLADALGKRVMVVDTSNEIGGDGDIPHPGIGGAR 182
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQV + QH V+IEAVENHMP+ IV+DEIGT EA AA TIA+RG+QLVATAHG T+E
Sbjct: 183 RMQVSRPDRQHDVMIEAVENHMPEAIVVDEIGTAAEAAAARTIAERGVQLVATAHGNTLE 242
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NL++NP+L L+GGVQ VTL D+EA RRG QKTV ERKG TF VE+V++ E+RVH
Sbjct: 243 NLVLNPTLSDLVGGVQTVTLSDDEARRRGTQKTVTERKGTPTFDIVVEMVNRDEVRVHRD 302
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTG 428
VD +L+G E RR Q DG+ + VE A+EV E T
Sbjct: 303 TGGAVDRLLTGAEVGGEKRR-QQDGA-------------------VHVEAALEVVEA-TP 341
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+ + P +G R+ + + + ++++ L ++ V A+ +
Sbjct: 342 PGGRVPKGTPALGAPRPGP---TRIAAHAVSRELLERVLRDLPVEAVV--VGRPENAEVV 396
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKIN 548
L L S+ + ++ AA+ + A K +S +I +ALR EF L D +
Sbjct: 397 LTLRSR-ANSPRLRRAAERVGARVLAIKRNSATEIRRALRM-------EFHLLEGVDPAD 448
Query: 549 LSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDAR 608
+ + EEA Q V+ +G S+ L PRPS + +Q L+ K L VG EP
Sbjct: 449 VHAAVADAEEA----IQRVLSEGISLPLAPRPSRLRKLQHTLVVKNHLEAVSVGSEPVRH 504
Query: 609 LRILPFQT 616
L I P T
Sbjct: 505 LVIYPLGT 512
>gi|148243212|ref|YP_001228369.1| AAA ATPase [Synechococcus sp. RCC307]
gi|147851522|emb|CAK29016.1| AAA ATPase superfamily protein [Synechococcus sp. RCC307]
Length = 470
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/451 (45%), Positives = 279/451 (61%), Gaps = 20/451 (4%)
Query: 84 PEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
PE +++ ++ +L+EVV+DLGR P AR+ L D ++ ++ ++G F
Sbjct: 31 PERLQVCLAAPERRADLLEVVLDLGRLPAARYADRTDDLGDQPVSSDDLQGVIERLGPFG 90
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
DNRAGI RTLHRISA+RNR G +IGLTCRVGRAV G+ +++DL+ G SLL +G PGV
Sbjct: 91 GDNRAGIERTLHRISAVRNRSGCVIGLTCRVGRAVFGTVAMVRDLLDTGESLLLLGRPGV 150
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKTT +REIARVLA+D +RVM++DTS+EI G+GDIPHP IG ARR+QV ++QH+V+I
Sbjct: 151 GKTTALREIARVLADDLGRRVMVIDTSNEIAGDGDIPHPAIGRARRLQVARPQLQHRVMI 210
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGV 323
EAVENHMP+VIVIDEIGT+ EA AA TIA+RG+QLVATAHG + NL+ NP+L L+GGV
Sbjct: 211 EAVENHMPEVIVIDEIGTEQEAQAARTIAERGVQLVATAHGNALANLVRNPTLSDLVGGV 270
Query: 324 QNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPN 383
Q VTLGD+EA RRG QK VLER TF AVE+ S++ VH + ATVD +L G+
Sbjct: 271 QAVTLGDDEARRRGSQKAVLERAAEPTFPLAVEMHSRSRWMVHGDVAATVDQLLRGQSSA 330
Query: 384 VEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPPNIGED 443
E+R + DG VE+ + + E P
Sbjct: 331 PEVRSVGPDGVL-VVERPILQGPRRGAPKRPPLPAPVVPLP----APAMALERP------ 379
Query: 444 CWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQA 503
+R++ GI V+Q + + VQLTD + ADA+LA +L ++ ++
Sbjct: 380 -------LRVFCCGIAPRLVLQAARTRRW--PVQLTDELLRADAVLAGRHQLGRHPELRK 430
Query: 504 AAKSHDIPIYATKTSSLVQITKALRALIDDH 534
A+ +PI+ K SL Q+ +AL L+ H
Sbjct: 431 RARDGAVPIHVIKADSLPQVQRALERLLRRH 461
>gi|298246463|ref|ZP_06970269.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
gi|297553944|gb|EFH87809.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
Length = 607
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/318 (58%), Positives = 235/318 (73%), Gaps = 4/318 (1%)
Query: 64 VSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLS 123
+ + V DD + LLA LP + V+ EL+E+VMDLGR RFP G+ LS
Sbjct: 1 MQHVVTDDLEA----LLATLPPSIHDAVNRLENRSELLEIVMDLGRLAEGRFPEGEVLLS 56
Query: 124 DCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN 183
+ +T +E+ ++G+F DNRAGI RTLHRISA+RNRKG ++GLTCR+GRAV GS
Sbjct: 57 NQPVTYADLEYVVERIGEFGDDNRAGIERTLHRISALRNRKGKVVGLTCRIGRAVLGSIA 116
Query: 184 LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPG 243
L++D+V+ G S+L +G PGVGKTT++REIARVLA++ KRV++VDTS+EI G+GDIPHPG
Sbjct: 117 LIRDIVEQGQSILILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPG 176
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
IG ARRMQV + QH V+IEAVENHMPQVIVIDEIGT+LEA AA TIA+RG+QLVATAH
Sbjct: 177 IGRARRMQVARTVEQHAVMIEAVENHMPQVIVIDEIGTELEAAAARTIAERGVQLVATAH 236
Query: 304 GVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
G T+ NL+MNP+L L+GG+Q VTLGDEEA RR QK++LERK P TF VE S E+
Sbjct: 237 GNTLGNLLMNPTLSDLVGGIQTVTLGDEEARRRHTQKSILERKAPPTFDVVVEQQSWEEV 296
Query: 364 RVHHSLEATVDAILSGRI 381
VH + TVD +L G I
Sbjct: 297 IVHRDVADTVDTMLRGMI 314
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 451 IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLK-KNSGIQAAAKSHD 509
+R+Y +G+ + + L++ V +T+N EADA++ L + + + +Q AA+
Sbjct: 439 LRVYPFGVNRDRLSDASRHLRV--PVVITNNQKEADAVMTLKNYYRHQGERLQLAAQDGK 496
Query: 510 IPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEEARV-------- 561
+ I K +++ Q+ AL + D + ED + E AL E
Sbjct: 497 LLII-LKNNTVSQMQHALARIFD--------IPEEDTVEGEESHPALGEMHFDDPTKQAL 547
Query: 562 -----AIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQT 616
AI QV+ + EL P S+I +Q + +Y L + GKEP+ R++I F+
Sbjct: 548 LETEDAIHQVLNKGLTTAELPPANSHIRRLQHQMATRYNLLSRSRGKEPNRRVKI--FRA 605
Query: 617 R 617
R
Sbjct: 606 R 606
>gi|33866596|ref|NP_898155.1| hypothetical protein SYNW2064 [Synechococcus sp. WH 8102]
gi|33633374|emb|CAE08579.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 543
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 242/335 (72%), Gaps = 4/335 (1%)
Query: 65 SYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSD 124
+ + DD + RLLALLP+ +R + +L+EVV+DLGR P AR+P +L +
Sbjct: 3 TQRITDDLE----RLLALLPDPVRDALRPPERRDQLLEVVLDLGRVPEARYPGQALALGE 58
Query: 125 CQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANL 184
+T ++ +++G F DNRAGI RTLHRISAIRNR+G ++GLTCRVGRAV G+ L
Sbjct: 59 VALTRDDLDAMVARLGCFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAL 118
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
++DL+ G SLL +G PGVGKTT +REIARVLA+D ++RV+++DTS+EI G+GDIPHP I
Sbjct: 119 VRDLLDGGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAI 178
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G ARRMQV E QH+V+IEAVENHMP+VIVIDEIGT+LEA AA TIA+RG+ LVATAHG
Sbjct: 179 GRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHG 238
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+ NLI NP+L L+GG+Q+VTLGD+EA RR QKTVLER TF AVE+ S+
Sbjct: 239 NALANLIKNPTLSDLVGGIQSVTLGDDEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWA 298
Query: 365 VHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVE 399
VH + +TVD +L G P ++ R + DG+ V+
Sbjct: 299 VHTDVASTVDQLLRGLPPRIQERELAADGAVRLVD 333
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 476 VQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHT 535
VQ+ +++S+AD +L++ L + ++ A+ +PI K +L Q+ +AL L+
Sbjct: 404 VQVVEDLSDADVVLSIRQGLGRQPSLRRQARELKVPILVIKADTLPQVERALERLLSRRE 463
Query: 536 GEFKDLRSEDKINLS-----EKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDL 590
G + E+ +S +++ LEE R+A+EQVV+P+G VELLPR + +Q DL
Sbjct: 464 G----MDQEEPGPVSGDGQDDELAGLEECRLAVEQVVMPQGRPVELLPRSERVRRMQADL 519
Query: 591 IRKYQLHYQRVGKEPDARLRILP 613
+ +Y+L G+ RLR+ P
Sbjct: 520 VERYRLRSDVFGQAEQCRLRVFP 542
>gi|11467491|ref|NP_043637.1| ORF455 [Odontella sinensis]
gi|1351772|sp|P49540.1|YCF45_ODOSI RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF455
gi|1185186|emb|CAA91669.1| ORF455, homologous to Porphyra ORF565 [Odontella sinensis]
Length = 455
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/453 (41%), Positives = 287/453 (63%), Gaps = 11/453 (2%)
Query: 73 DIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
D +L L+ LP +R +++HP +LIE+V+DLGR+P ARF +G LS I+ I
Sbjct: 4 DEDLDNLIKNLPFLIRQNINQHPSKQKLIEIVIDLGRRPEARFTTGPEYLSQKVISWQDI 63
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
H T ++ F+ DNRAGI RTLHRIS IRNR+ I GLTCR+GRA+ G+ + ++DL++
Sbjct: 64 NHFTKRISKFSNDNRAGIERTLHRISCIRNRQFLINGLTCRIGRAIFGTISSVRDLLESQ 123
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+L +G PGVGKTTIIREIARVL+++ +KRV+IVDTS+EI G+ DIPH IG ARRMQV
Sbjct: 124 QSILLLGKPGVGKTTIIREIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSAIGRARRMQV 183
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+++QH+++IEAVENHMPQVIVIDEIGT+LEA+AA TIA++G+QLV T HG +ENLI
Sbjct: 184 ATTDLQHQIMIEAVENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIK 243
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP L LIGG+Q+VTL D+EA RRG QK+++ERK F A+EI ++ +H ++++
Sbjct: 244 NPPLSDLIGGIQSVTLSDDEAKRRGTQKSIIERKAYPAFQIAIEINTENSWTIHEDIKSS 303
Query: 373 VDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSS--DEEDEMMVEDAMEVTEERTGKI 430
+D +L ++R + D K+ +T + + + + ++ T
Sbjct: 304 IDLLLRKSFTGTQVRELFLDKRTFIKYKKLQIDTFTLLKDSNSLKIQTINRSNNWFTRSQ 363
Query: 431 QFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLA 490
+ + F + + C+ +++Y + + +++ +L+ LT + ++ ++
Sbjct: 364 KSLFYFQNSKAKKCF-------IFIYSLPSNLISEILNKLKFQYV--LTKELQKSSLIVG 414
Query: 491 LHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQI 523
L +N ++ A+ IP+Y+ ++ QI
Sbjct: 415 SKVSLNQNFKLKKLAQQCSIPVYSVNKENIYQI 447
>gi|443474815|ref|ZP_21064783.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
gi|443020404|gb|ELS34366.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
Length = 591
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 241/339 (71%), Gaps = 5/339 (1%)
Query: 64 VSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLS 123
+ V D+ D +LL +LP ++ + L +L+E+VMDLGR P AR+ L+
Sbjct: 4 IRKQVTDNLD----QLLDILPPRIKNSLELCGGLEQLVEIVMDLGRLPEARYFDTTKYLT 59
Query: 124 DCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN 183
D IT + QVG+F DNRAGI RTLHRISAIRNRKG IIGLTCRVGRAV G+
Sbjct: 60 DDPITKEDLAICVQQVGEFGGDNRAGIERTLHRISAIRNRKGEIIGLTCRVGRAVYGTIA 119
Query: 184 LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPG 243
+++DLV+ G S+L +G PG+GKTT +REIARVLA+D KRV+I+D+S+EI G+GDIPHP
Sbjct: 120 MIRDLVETGKSILLLGKPGMGKTTALREIARVLADDLNKRVVIIDSSNEIAGDGDIPHPA 179
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
IG ARRMQV E+QH+V+IEAVENHMP+VIVIDEIGT+LEA+AA TIA+RG+QLV TAH
Sbjct: 180 IGRARRMQVSQPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 239
Query: 304 GVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV-QKTVLERKGPSTFSCAVEIVSKTE 362
G + NLI NP+L LIGG+Q+VTLGDEE RRG+ QK++LERK TF AVE+ +
Sbjct: 240 GNQLANLIKNPTLSDLIGGIQSVTLGDEEMRRRGLPQKSILERKAQPTFDIAVEMWERYR 299
Query: 363 LRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKE 401
VH + T+D +L R P +IR + G T E++
Sbjct: 300 WAVHTDVAGTIDMLLRDRDPGRQIRAVSDAGEVTTTEEK 338
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 108/166 (65%), Gaps = 5/166 (3%)
Query: 451 IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDI 510
+ +Y+YG+ Q+++ + + +++T ++ EAD +LAL S+++ +S ++ A++ I
Sbjct: 427 LNVYLYGVSRHQTEQVVQSINL--PIEITKDLDEADIVLALRSQIRTSSKVRQVAEARQI 484
Query: 511 PIYATKTSSLVQITKALRALI---DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVV 567
PI+A KTS+L QIT+ALR ++ + T DL + ++I+ALEE R+A+EQ+V
Sbjct: 485 PIHAIKTSTLPQITRALRRILHIDESPTDTISDLNMFAYGDSEDEIEALEETRLAVEQIV 544
Query: 568 IPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
IPKG+ VELLPR S I +Q +L+ YQL + G EP+ RLRI P
Sbjct: 545 IPKGQPVELLPRSSIIRRMQHELVEHYQLRSESYGSEPNRRLRIFP 590
>gi|412992135|emb|CCO19848.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/336 (55%), Positives = 247/336 (73%), Gaps = 17/336 (5%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSG------------DFSL 122
EL LL +LP +R ++ +H ELIEVVMD+GR PLARFP G F +
Sbjct: 165 ELNMLLRVLPSRIREQLHKHERKLELIEVVMDVGRVPLARFPEGPAEPLYSKESLKKFDV 224
Query: 123 SDCQ---ITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVS 179
D + IT+ I+ A +G+ DNRAGI TLHRIS IRNR+G +IGLTCRVGRAV
Sbjct: 225 WDAESSKITMDDIDEAVRLLGEVGGDNRAGIDGTLHRISMIRNRRGTVIGLTCRVGRAVK 284
Query: 180 GSANLLQDLVQDGASLLFI--GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
G+A L +DLV S + GPPGVGKTT IRE++R+L+ D+ +RV+IVDTS+EIGG+G
Sbjct: 285 GAAELCKDLVSSEESSSVLLLGPPGVGKTTAIREMSRLLSADFNQRVVIVDTSNEIGGDG 344
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
D+ HPG+GN+RRMQV + ++QH VLIEAVENH PQV+++DEIGT+ EAMAA TI++RG++
Sbjct: 345 DVAHPGVGNSRRMQVADPKLQHAVLIEAVENHTPQVVIVDEIGTEEEAMAARTISERGVK 404
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
++ATAHG T+EN++ NPSL L+GGVQ+VTLGD+EA RR QKT+LER+GP TFS AVE+
Sbjct: 405 MIATAHGHTLENVLKNPSLCDLVGGVQSVTLGDDEARRRRGQKTILEREGPPTFSIAVEM 464
Query: 358 VSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDG 393
+ RVH + ++VDA+L+G+ P E+R ++ DG
Sbjct: 465 LDIGLWRVHTDVASSVDALLAGQAPFTELRALREDG 500
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%)
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
++ + + E+ V ++ +L + + L + +ADA+L + +++K ++ AA+S IPI
Sbjct: 682 VFPFELNESEVRKVFLELGFETLIHLVSRLEDADAILGVKTRVKSAKWLRHAARSRGIPI 741
Query: 513 YATKTSSLVQITKALRALIDD 533
YA KT V + KA RA++ +
Sbjct: 742 YAMKTERPVSLIKAARAMLGE 762
>gi|145347639|ref|XP_001418270.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578499|gb|ABO96563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 335
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 242/329 (73%), Gaps = 7/329 (2%)
Query: 67 SVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPS--GDFSLSD 124
+V DD L RL +LP ++R V HPE L+EVV+DLGR P ARF G L +
Sbjct: 6 TVRDD----LTRLYGVLPADVRDAVKNHPERKHLLEVVLDLGRAPEARFLGEIGSMFLRE 61
Query: 125 CQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANL 184
+ + A VG+F DNRAGI TLHRIS IRNR+G I+G+TCRVGRAV+G ++
Sbjct: 62 APVVEAELVAAAKAVGEFGGDNRAGIEGTLHRISCIRNRRGHIVGMTCRVGRAVTGHIDM 121
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
++D++ G S+LF+G PGVGKTT+IRE+ARVL+++ KKRV+I+DTS+EIGG+GDIPHP I
Sbjct: 122 IRDILPSGESVLFLGRPGVGKTTVIREMARVLSDELKKRVVIIDTSNEIGGDGDIPHPAI 181
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G ARRMQVP+ MQH+V+IEAVENHMP+VI++DEIGT+ EA+A TIA+RG+QL+ TAHG
Sbjct: 182 GGARRMQVPDPSMQHRVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLIGTAHG 241
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+ENLI NP+L L+GGVQ VTLGD+EA RG QK++LER+GP TF +E+ + +
Sbjct: 242 QLLENLIKNPTLTDLVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERN-MW 300
Query: 365 VHHSLEATVDAILSGRIPNVEIRRMQHDG 393
V H++ +VD +LSG P V++R +G
Sbjct: 301 VAHNVAESVDEVLSGARPVVQLRTRDGEG 329
>gi|15217492|ref|NP_174599.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|12322578|gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana]
gi|48596989|gb|AAT46035.1| At1g33290 [Arabidopsis thaliana]
gi|50198961|gb|AAT70483.1| At1g33290 [Arabidopsis thaliana]
gi|332193460|gb|AEE31581.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 379
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 248/340 (72%), Gaps = 10/340 (2%)
Query: 52 SKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP 111
S +S+ DS S + DD LG L +LP+++R R+ +L+EV+MDLGR P
Sbjct: 27 SSVASLALPDS--SSMIVDD---NLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPP 81
Query: 112 LARF---PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAII 168
AR+ P G + L + ++++ +E A VG+F DNRAGI TLHRISAIRNRKG I+
Sbjct: 82 EARYLGEPGGQY-LRNNEVSMEELEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIV 140
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
GLTCRVGRAVSG ++L DL+ G S+LF+G PGVGKTT++REIARVL+++++KRV+I+D
Sbjct: 141 GLTCRVGRAVSGHIDMLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIID 200
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAA 288
TS+EIGG+GDIPH IG +RRMQVP +QHKV+IEAVENHMPQVI++DEIGT+ EA+A
Sbjct: 201 TSNEIGGDGDIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALAC 260
Query: 289 STIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGP 348
+IA+RG+ L+ TAHG ++N+I NP+L LIGG++ VTLGDEEA R QK++LERK P
Sbjct: 261 RSIAERGVMLIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAP 320
Query: 349 STFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
TF +E+ + + + H E +VD +L GR P VE+RR
Sbjct: 321 PTFYFLIEMRER-DYWIAHQTEKSVDMLLRGRNPMVEVRR 359
>gi|412993135|emb|CCO16668.1| single-stranded nucleic acid binding R3H domain-containing protein
[Bathycoccus prasinos]
Length = 484
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 243/321 (75%), Gaps = 9/321 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDF------SLSDCQIT 128
+L +L+++PE++R ++S+H +L+E+V+DLGR+P ARF + +L D +T
Sbjct: 30 DLTEMLSIVPEDVREKISKHAHRSKLLEIVLDLGRQPEARFSGMEDVKKQSETLRDDVVT 89
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
++HA VG+F DNRAG++ TLHRIS IRNR G IIGLTCRVGRAV+G +++ D+
Sbjct: 90 QEELDHAERVVGEFGGDNRAGVTGTLHRISCIRNRSGKIIGLTCRVGRAVTGHVDMIADV 149
Query: 189 VQ--DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
+ +G S+LF+G PGVGKTT+IREIARVL++D +KRV+I+DTS+EIGG+GDIPHP IG+
Sbjct: 150 LNRDNGESVLFLGKPGVGKTTVIREIARVLSDDLQKRVVIIDTSNEIGGDGDIPHPAIGS 209
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
ARRMQVPN QHKV+IEAVENH P++I++DEIGT++EA+A TIA+RG+QL+ TAHG
Sbjct: 210 ARRMQVPNPSEQHKVMIEAVENHTPEIIIVDEIGTEMEALACRTIAERGVQLIGTAHGRL 269
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVH 366
+ENLI NP+L L+GGV VTLGD+EA RG QKT+ ER P+TF VE+ +++ + V
Sbjct: 270 LENLIKNPTLSDLVGGVTTVTLGDDEARSRGCQKTISERAAPATFPIVVEMHARS-MWVE 328
Query: 367 HSLEATVDAILSGRIPNVEIR 387
H +E +VD IL G P V +R
Sbjct: 329 HDVEVSVDDILVGNRPVVNLR 349
>gi|303285736|ref|XP_003062158.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456569|gb|EEH53870.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 570
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/336 (54%), Positives = 243/336 (72%), Gaps = 12/336 (3%)
Query: 56 SVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF 115
+V +D +Y DD D +G +LP ++R + HP L+EV++DLGR P+ARF
Sbjct: 69 AVRDADGFTTY--RDDLDAMIG----MLPSDVREVLMCHPHRASLVEVILDLGRCPVARF 122
Query: 116 PSGDFSLSDC----QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLT 171
GD +C +T + A + VGDF DNRAGI TLHRIS IRNR G I+GLT
Sbjct: 123 -VGDAVPDECLRAAPVTAEDLRKAEASVGDFGGDNRAGIEGTLHRISCIRNRAGKIVGLT 181
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSS 231
CRVGRAV+G +++QDL+ S LF+G PGVGKTT+IRE+ARVL+++ KRV+I+DTS+
Sbjct: 182 CRVGRAVNGHVDMIQDLLGSSESCLFLGRPGVGKTTVIREMARVLSDELGKRVVIIDTSN 241
Query: 232 EIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTI 291
EIGG+GD+PHP IG ARRMQVP QHKV+IEAVENHMP+VI++DEIGT+ EA+A TI
Sbjct: 242 EIGGDGDVPHPAIGGARRMQVPEPSAQHKVMIEAVENHMPEVIIVDEIGTEAEALACRTI 301
Query: 292 AQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTF 351
A+RG+QLV TAHG +ENLI NP+L+ L+GG+Q+VTLGD+EA RG QKT++ER GP+TF
Sbjct: 302 AERGVQLVGTAHGQLLENLIQNPTLKDLVGGIQSVTLGDDEARARGCQKTIMERAGPATF 361
Query: 352 SCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIR 387
+E+ ++ V H++E +VD IL+G P V+ R
Sbjct: 362 PIVIEMHERS-FWVAHNVEESVDEILTGGRPMVQTR 396
>gi|384251818|gb|EIE25295.1| hypothetical protein COCSUDRAFT_13766, partial [Coccomyxa
subellipsoidea C-169]
Length = 322
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 174/307 (56%), Positives = 236/307 (76%), Gaps = 3/307 (0%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQV 139
+LPE++R + +H L+EVV+DLGR+P ARF G L D +IT ++ A V
Sbjct: 1 VLPEDIREPLVQHQNRASLLEVVLDLGRRPEARFLGVGGGEYLRDAEITWDDLKAAEDAV 60
Query: 140 GDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIG 199
GDF DNRAG+ TLHRISA+RNRKG I+GLTCRVGRAV+G ++++D++ S+LF+G
Sbjct: 61 GDFGSDNRAGVQGTLHRISAMRNRKGTIVGLTCRVGRAVTGHVDMIRDILDVPNSVLFLG 120
Query: 200 PPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQH 259
PGVGKTT+IRE+AR+L++D KKRV+IVDTS+EIGG+GD+PHP IG ARRMQVP+ QH
Sbjct: 121 RPGVGKTTVIREMARILSDDLKKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVPDPSQQH 180
Query: 260 KVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
KV++EAVENHMP+++++DEIGT+ EA+A TIA+RG+QL+ATAHG +ENL+ NP+L L
Sbjct: 181 KVMVEAVENHMPEIVIVDEIGTEAEALACRTIAERGVQLIATAHGQLLENLLKNPTLSDL 240
Query: 320 IGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSG 379
+GG+Q+VTLGDEEA RG QK+VLERK P TF +E+ + V H +E +VD +L G
Sbjct: 241 VGGIQSVTLGDEEARARGTQKSVLERKAPPTFPLVIEMRERAYW-VTHWVEDSVDCLLHG 299
Query: 380 RIPNVEI 386
++P V++
Sbjct: 300 KVPVVQV 306
>gi|297846316|ref|XP_002891039.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
gi|297336881|gb|EFH67298.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 251/349 (71%), Gaps = 12/349 (3%)
Query: 47 FSGFRSKFSSVLFSDSRVSYSVNDD----FDIELGRLLALLPEEMRIRVSEHPELYELIE 102
FS R +F +FS + S S+ D D L L +LP+++R R+ +L+E
Sbjct: 16 FSPIRRRFP--VFS-TVASLSLPDSSAMIVDDNLAAFLEILPKDLRHRLLNDSRRNQLVE 72
Query: 103 VVMDLGRKPLARF---PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISA 159
V+MDLGR P AR+ P G + L + ++++ +E A VG+F DNRAGI TLHRISA
Sbjct: 73 VIMDLGRPPEARYLGEPGGQY-LRNNEVSMEELEDAQELVGEFGADNRAGIEGTLHRISA 131
Query: 160 IRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAND 219
IRNRKG I+GLTCRVGRAVSG ++L DL+ G S+LF+G PGVGKTT++REIARVL+++
Sbjct: 132 IRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDE 191
Query: 220 YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
++KRV+I+DTS+EIGG+GDIPH IG +RRMQVP +QHKV+IEAVENHMPQVI++DEI
Sbjct: 192 FQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEI 251
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQ 339
GT+ EA+A +IA+RG+ L+ TAHG ++N+I NP+L LIGG++ VTLGDEEA R Q
Sbjct: 252 GTEAEALACRSIAERGVMLIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRTQ 311
Query: 340 KTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
K++LERK P TF +E+ + + + H E +VD +L GR P VE+RR
Sbjct: 312 KSILERKAPPTFYFLIEMRER-DYWIAHQTEKSVDMLLRGRNPMVEVRR 359
>gi|159484693|ref|XP_001700387.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272274|gb|EDO98076.1| predicted protein [Chlamydomonas reinhardtii]
Length = 324
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 226/310 (72%)
Query: 84 PEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
P +R + P++ +L+EVVMDLGR P ARFP GD L +T ++ A QVG F
Sbjct: 13 PSRVRAVLEARPDIEQLVEVVMDLGRPPSARFPHGDVDLCPEPMTAQDLDTAVRQVGHFD 72
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
DNRAGI TLHRISAIRNR G ++GLTCRVGRAV G+A L++DLV G S+L +G PGV
Sbjct: 73 GDNRAGIDSTLHRISAIRNRGGRVVGLTCRVGRAVPGAAALVRDLVLAGRSVLLLGRPGV 132
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKTT +RE+ R+ A++ +RV++VDTS+EIGG+GD+PHP IG ARRMQV E QH V++
Sbjct: 133 GKTTALREVCRIAADEAARRVVVVDTSNEIGGDGDVPHPSIGGARRMQVSRPEAQHAVMV 192
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGV 323
EAVENHMPQV+VIDEI T E AA TIAQRG+QLVATAHG ++N+I NP+L L+GG+
Sbjct: 193 EAVENHMPQVVVIDEISTLAECGAARTIAQRGVQLVATAHGRQLDNVIKNPTLADLVGGI 252
Query: 324 QNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPN 383
Q+VTLGDEEA RRGVQK++LER P TF AVE+ + RVH + A VD++L+G
Sbjct: 253 QSVTLGDEEAKRRGVQKSILERAAPPTFDVAVEMEERGRWRVHLDVAAAVDSLLAGGEAA 312
Query: 384 VEIRRMQHDG 393
++R + G
Sbjct: 313 GQVRLLDDSG 322
>gi|378824540|ref|YP_005089710.1| ycf45 gene product (chloroplast) [Synedra acus]
gi|371572739|gb|AEX37835.1| hypothetical protein (chloroplast) [Synedra acus]
Length = 448
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 286/468 (61%), Gaps = 47/468 (10%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L +L LP + + +H +LIE+V+DLGR+P ARFP+G LS I+ +++
Sbjct: 4 DLEKLFEKLPFFLYDHLVKHMYADQLIEIVLDLGRRPEARFPTGPEYLSQKVISWQDLDY 63
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGR++ G+ ++++DL++ G S
Sbjct: 64 TTKRISKFSTENRAGIERTLHRISCIRNRQFLITGLTCRVGRSIFGAISVIRDLLESGQS 123
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PGVGKTTIIREI RVLA++ +KRV+++DTS+EI G DIPH GIG ARRMQV
Sbjct: 124 ILILGKPGVGKTTIIREIGRVLADEMEKRVVVIDTSNEIAGESDIPHSGIGRARRMQVAK 183
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+E+QH+V+IEAVENHMPQVI+IDEIGT+LE +AA TIA++G+QLV T HG ++NLI NP
Sbjct: 184 TELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLQNLIKNP 243
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L LIGG+Q VTL D+EA RR QKTVLERK F +EI + +H ++ ++D
Sbjct: 244 PLADLIGGIQYVTLSDDEAKRRKTQKTVLERKAYPAFEILIEINQQNSWTIHEDVKTSID 303
Query: 375 AILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT----GKI 430
+L G D E + FF+ + + +++ ERT G +
Sbjct: 304 LLLRG------------DSFMEQI--RFFS-----------LPEKIKIFSERTQPQYGSL 338
Query: 431 QFISEFPPNIGEDCW--------EDGL-----LIRLYVYGILEATVVQLIKQLQMDDAVQ 477
F PN+ W E+ L L+ +Y Y I + +++ L+M
Sbjct: 339 SNNQTFFPNL---TWSSVNTLKHENSLKLKTKLLIIYPYSISNNLLKEVL--LRMGINFI 393
Query: 478 LTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITK 525
LT+ + +A +L L L KN + A ++IPIY+ + S Q+ +
Sbjct: 394 LTNEVKKASIILGLKKHLNKNISLTQIATKYNIPIYSFNSISYYQLVR 441
>gi|222423588|dbj|BAH19763.1| AT1G33290 [Arabidopsis thaliana]
Length = 379
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 247/340 (72%), Gaps = 10/340 (2%)
Query: 52 SKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP 111
S +S+ DS S + DD LG L +LP+++R R+ +L+EV+MDLGR P
Sbjct: 27 SSVASLALPDS--SSMIVDD---NLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPP 81
Query: 112 LARF---PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAII 168
AR+ P G + L + ++++ +E A VG+F DNRAGI TLHRISAIRNRKG I+
Sbjct: 82 EARYLGEPGGQY-LRNNEVSMEELEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIV 140
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
GLTCRVGRAVSG ++L DL+ G S+LF+G PGVGKTT++REIARVL+++++KRV+I+D
Sbjct: 141 GLTCRVGRAVSGHIDMLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIID 200
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAA 288
TS+EI G+GDIPH IG +RRMQVP +QHKV+IEAVENHMPQVI++DEIGT+ EA+A
Sbjct: 201 TSNEIEGDGDIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALAC 260
Query: 289 STIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGP 348
+IA+RG+ L+ TAHG ++N+I NP+L LIGG++ VTLGDEEA R QK++LERK P
Sbjct: 261 RSIAERGVMLIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAP 320
Query: 349 STFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
TF +E+ + + + H E +VD +L GR P VE+RR
Sbjct: 321 PTFYFLIEMRER-DYWIAHQTEKSVDMLLRGRNPMVEVRR 359
>gi|299830572|ref|YP_003735020.1| hypothetical protein PyulOm_p071 [Durinskia baltica]
gi|297384936|gb|ADI40235.1| hypothetical protein [Durinskia baltica]
Length = 455
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 201/463 (43%), Positives = 286/463 (61%), Gaps = 9/463 (1%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+N D D+E +LL LP ++ + +HP ELIE+V+DLGR+P ARF G LS I
Sbjct: 1 MNTDNDLE--KLLQNLPFFIQQYLHQHPYKNELIEIVLDLGRRPEARFSHGPEYLSQKII 58
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ +++ T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCRVGRAV G+ ++++D
Sbjct: 59 SWQDLDYITQRISKFSSENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISVIRD 118
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L++ S+L +G PGVGKTTIIREI RVLA++ +KRV+I+DTS+EI G+ DIPH GIG A
Sbjct: 119 LLESDKSILILGRPGVGKTTIIREIGRVLADEMEKRVIIIDTSNEIAGDSDIPHFGIGRA 178
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV +E QH+V+IEAVENHMPQVI+IDEIGT LE +AA TIA++G++LV T HG +
Sbjct: 179 RRMQVSQTEFQHQVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLVGTTHGNCL 238
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENLI NPSL LIGG++ VTL DEEA RRG QK++LERK TF +EI + +H
Sbjct: 239 ENLIKNPSLAELIGGIKYVTLSDEEAKRRGTQKSILERKAYPTFELVIEINNSNSWTIHE 298
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+ +VD L +IR++ K ++ + + S+ + + + ER
Sbjct: 299 DVAHSVDLFLRNNSGKEQIRQILLP-EKVQIKCQNYYPYSTFLMKSIKNSNQNLIPSERI 357
Query: 428 GKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADA 487
I+EF L+I Y Y I + + + ++ + LT +I +A
Sbjct: 358 WP--EINEFNSKYSAQLSSKNLII--YSYSISNNFIKEAMSKVNI--RFTLTTDIKKASL 411
Query: 488 LLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRAL 530
++ L L N ++ A+ +IPIY+ S+ Q K ++
Sbjct: 412 IIGLKKHLINNLRLKKLAQQKNIPIYSLNQLSIYQFMKLIQTF 454
>gi|356534378|ref|XP_003535732.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 568
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/237 (70%), Positives = 207/237 (87%)
Query: 94 HPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRT 153
H E+ LIEVVMDLGRKPLARFPSGD+ +S+ I + HA S+VG+F+ DNR+GI R+
Sbjct: 72 HTEIGGLIEVVMDLGRKPLARFPSGDWVISEQPIAQEDLRHAISKVGEFSDDNRSGIDRS 131
Query: 154 LHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIA 213
LHRISAIRNRK IIGLTCRVGRAV GSA +++DLV+DG S+L IGPPGVGKTT+IREIA
Sbjct: 132 LHRISAIRNRKMQIIGLTCRVGRAVGGSAEIIRDLVEDGGSILVIGPPGVGKTTLIREIA 191
Query: 214 RVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
R+LA++++KRV+IVDTS+EIGG+GD+PH GIG ARR QVPN MQH V+IEA+ENHMP+
Sbjct: 192 RMLADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRTQVPNVNMQHGVMIEAIENHMPET 251
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGD 330
I+IDEIGT+LEA+AASTIAQRG+QLV TAHG+TIEN+I NP L++L+GG+++VTLG+
Sbjct: 252 IIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILVGGIESVTLGE 308
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 119/188 (63%), Gaps = 15/188 (7%)
Query: 451 IRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDI 510
+++Y Y ILEA ++Q+ K + ++D + +TD+I A+A+LA S++++N I+ AK H +
Sbjct: 352 MQVYTYKILEADLLQVAKVMGLEDVIDVTDDIGTAEAILASSSEIRQNPWIRGVAKFHHV 411
Query: 511 PIYATKTSSLVQITKALRALI---------DDHTGEFKDLRSED-----KINLSEKIDAL 556
P++ K++++ Q+ KA+R ++ E D+ ED K +L E+IDAL
Sbjct: 412 PVFVIKSNTMAQVVKAVRMILGLEFFGPTPKKALNECLDIEIEDDEPKRKPSL-EEIDAL 470
Query: 557 EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQT 616
EE R+AIE +VIP GE VELLPR S I++ Q++L++ YQL ++ G + + RL+ILP +
Sbjct: 471 EEVRLAIEYIVIPGGEPVELLPRRSEIIARQLELVQSYQLAAEKSGSDQNPRLQILPLRL 530
Query: 617 RRDEPRNS 624
+P S
Sbjct: 531 NTKKPSKS 538
>gi|88811456|ref|ZP_01126711.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
gi|88791345|gb|EAR22457.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
Length = 513
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 224/548 (40%), Positives = 316/548 (57%), Gaps = 47/548 (8%)
Query: 66 YSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDC 125
++ DD + RLL +LP+ ++ ++ P EL+E+V+DLGR+P AR G L+
Sbjct: 4 FTETDDLE----RLLRILPQPLQSAITALPS-SELLEIVLDLGRRPQARLIQGALDLAGT 58
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
+T +E TS VG F DNRAGI TLHR++AIRNR G ++GLT RVGRAV G+ + +
Sbjct: 59 PVTRLDLERITSTVGPFTADNRAGIEGTLHRVAAIRNRTGTVVGLTLRVGRAVFGTIDAI 118
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
DL+ G SLL +GPPG+GKTT +REIARVLA++ +RV+++DTS+EI G+GDIPHPGIG
Sbjct: 119 HDLIAQGGSLLLLGPPGIGKTTRLREIARVLADECARRVIVIDTSNEIAGDGDIPHPGIG 178
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
ARRMQV + + QH+V+IEAVENHMP+VI++DEIGT EA AA TIA+RG+QL+ TAHG
Sbjct: 179 CARRMQVAHPDRQHRVMIEAVENHMPEVIIVDEIGTSAEAAAARTIAERGVQLIGTAHGT 238
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
T+ENL++NP+L L+GGVQ VTL DEEA RG QKTV ER GP TF VEIV + L +
Sbjct: 239 TLENLVLNPTLADLVGGVQTVTLSDEEARARGTQKTVSERCGPPTFDAVVEIVDRERLLI 298
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEE 425
H VDAILSG +P R + S ET ++ T +
Sbjct: 299 HRDAGRAVDAILSG-LPANGQSRGGGNVSSETQRPPPQSQPPEHPRP--------LATLQ 349
Query: 426 RTGKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEA 485
R+G+ L+R+Y Y I +V ++I+ L+++ T +E
Sbjct: 350 RSGE-------------------RLVRIYAYAISRDSVEKVIRDLRLN---ARTVPRAEQ 387
Query: 486 DALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSED 545
L + ++ + IP++ K +S QI + LR L + G +
Sbjct: 388 ADLALALRARAADPRLRRLLAATSIPLHQVKRNSTAQIRRLLRDLFNVVPGLEE------ 441
Query: 546 KINLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEP 605
E +D Q V+ +G +VEL PR + I +Q + +++L + G +P
Sbjct: 442 -----ETVDEAAREAEQAAQRVLAQGIAVELTPRSAPIRRMQHRIAMRHRLLAESAGSDP 496
Query: 606 DARLRILP 613
RL + P
Sbjct: 497 QRRLVLHP 504
>gi|194477061|ref|YP_002049240.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
gi|171192068|gb|ACB43030.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
Length = 477
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/459 (42%), Positives = 283/459 (61%), Gaps = 15/459 (3%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL LL +LP + +S ++ EL+E+++DLG+ P+A + + L D IT +E
Sbjct: 19 ELNHLLNILPARVYQALSNQQKMEELLEIILDLGKIPIAHYRNNSLLLGDKPITRIDLER 78
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
T ++G F DNR GI TLHRISA+RNRKG IIGLTCRVGRA+ G +++DL+ G S
Sbjct: 79 ITERLGSFGEDNRVGIDSTLHRISALRNRKGTIIGLTCRVGRAICGDIIMIRDLLDSGQS 138
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PG+GKTT +REIAR+LA+D +RV+I+DTS+EI G+ DIPHP IG ARRMQV N
Sbjct: 139 ILIMGCPGIGKTTALREIARLLADDLNRRVIIIDTSNEIAGDSDIPHPSIGKARRMQVAN 198
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+QH+++IEA+ENH P+VIVIDEIGT++EA AA TIA+RGIQL+ATAHG + +L+ NP
Sbjct: 199 PNLQHRMMIEAIENHTPEVIVIDEIGTEMEAQAARTIAERGIQLIATAHGDGLASLVKNP 258
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+Q+V LGD+EA RR QKTVLER TF A+E+ + +H + VD
Sbjct: 259 TLSDLVGGIQSVILGDDEAQRRCTQKTVLERAADPTFPVAIEMHTSHRWSIHADVAHMVD 318
Query: 375 AILSGRIPNVEIRRMQHD------GSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTG 428
IL + + R GSK A ++ +++ TE+
Sbjct: 319 IILRNWNSSSSLSRDYLSNKGLPIGSKTDKSSLLVANNLTNSLSTNFWKNSRSRTEDLNP 378
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+++ S + E LIR++ GI + +LI L ++L DN+ AD +
Sbjct: 379 NMKYDSTDMLVLPE-------LIRIFCCGITCKLLNELI--LIYKWPLRLIDNVRSADII 429
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKAL 527
L++ L N+ I+ A++H IPI K+ ++ I +A+
Sbjct: 430 LSVPKYLSHNTLIRRHAQNHRIPILIIKSETVADIRQAI 468
>gi|255072155|ref|XP_002499752.1| predicted protein [Micromonas sp. RCC299]
gi|226515014|gb|ACO61010.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/316 (56%), Positives = 244/316 (77%), Gaps = 6/316 (1%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS---LSDCQITVHHIEHATSQ 138
+LPE++R ++ H +L+EVV+DLGR+P ARF +GD L D I+ ++ A +
Sbjct: 1 MLPEDVRGILTTHRNRDQLLEVVLDLGRRPEARF-AGDLPNEFLRDEVISQADLDAAEAS 59
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
VG+F DNRAGI TLHRISAIRNR+G I+GLTCRVGRAV+G +++D++ S+LF+
Sbjct: 60 VGEFGGDNRAGIEGTLHRISAIRNRRGKIVGLTCRVGRAVTGHVEMIEDMLTGNESILFL 119
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G PGVGKTT+IREIARVL+++ KRV+I+DTS+EIGG+GDIPH IG+ARRMQVP+ +Q
Sbjct: 120 GRPGVGKTTVIREIARVLSDELGKRVVIIDTSNEIGGDGDIPHRAIGSARRMQVPDPALQ 179
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
H+++IEAVENHMP+VI++DEIGT+ EA+A TIA+RG+QLV TAHG +ENLI NP+L
Sbjct: 180 HQIMIEAVENHMPEVIIVDEIGTEEEAIACRTIAERGVQLVGTAHGQLLENLIKNPTLTD 239
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GGVQ+VTLGD+EA RG QKT++ER+ P TF +E+ ++ + V H++E +VD +L+
Sbjct: 240 LVGGVQSVTLGDDEARARGCQKTIMERQAPPTFPILIEMHERS-MWVAHNVEESVDEVLA 298
Query: 379 GRIPNVEIR-RMQHDG 393
G P V++R R Q+ G
Sbjct: 299 GGRPMVQVRSRDQNTG 314
>gi|226531438|ref|NP_001144701.1| uncharacterized protein LOC100277737 [Zea mays]
gi|195645988|gb|ACG42462.1| hypothetical protein [Zea mays]
gi|414865048|tpg|DAA43605.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 390
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/360 (49%), Positives = 246/360 (68%), Gaps = 5/360 (1%)
Query: 31 FPYLRSSPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIR 90
P + SP F + G + + + V + +L LL +LP ++R
Sbjct: 14 LPTPKLSPEHPLFRQRRRG--RTWPGIARCATEVGTGWGGIVEDDLSELLQILPRDLRDN 71
Query: 91 VSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRA 148
+ P +L+EV++DLGR+P ARF SG L D +I+ +E A VG+F DNRA
Sbjct: 72 LQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQKAVGEFGGDNRA 131
Query: 149 GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTI 208
GI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF+G PGVGKTT+
Sbjct: 132 GIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLGRPGVGKTTV 191
Query: 209 IREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
+REIARVLA++++KRV+IVDTS+EIGG+GD+PH IG ARRMQVP MQH+V+IEAVEN
Sbjct: 192 MREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQVPEPSMQHRVMIEAVEN 251
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTL 328
HMP+V+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I NP+L LIGGV+ VTL
Sbjct: 252 HMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKNPTLSDLIGGVETVTL 311
Query: 329 GDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
GD+EA R QK++LERK P TF +E+ + V H E +VD +L G+ P VE+R+
Sbjct: 312 GDDEARARRSQKSILERKAPPTFPFLIEMRER-HYWVTHRTERSVDMLLHGKKPLVEVRK 370
>gi|357504105|ref|XP_003622341.1| F-box protein [Medicago truncatula]
gi|355497356|gb|AES78559.1| F-box protein [Medicago truncatula]
Length = 663
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 244/343 (71%), Gaps = 8/343 (2%)
Query: 60 SDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PS 117
S S+ S NDD L LL +LP ++ + P +L+EV++DLGR P AR+ +
Sbjct: 318 SQSQCSLVHNDD----LQALLQILPSDLHHNLLNQPNRPQLLEVILDLGRFPEARYLGKN 373
Query: 118 GDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRA 177
G+ L + ++TV +E+A VG+F DNRAGI TLHRISAIR+R G I+GLTCR+GRA
Sbjct: 374 GNHYLRNSEVTVRELEYAEGAVGNFGKDNRAGIEGTLHRISAIRSRNGGIVGLTCRIGRA 433
Query: 178 VSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
V+G +++ DL+ G S+LF+G PGVGKTT++REIARVL++++ KRV+IVDTS+EIGG+G
Sbjct: 434 VTGHIDMVYDLLHYGKSILFLGRPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDG 493
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
+IPH IG ARRMQV MQH V+IEAVENHMP+VI++DEIGT+ EA A +IA+RGI
Sbjct: 494 NIPHAAIGGARRMQVSEPSMQHSVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIM 553
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
L+ TAHG IEN++ NP+L LIGG+++VTLGD EA R QKT+LERK P TF +E+
Sbjct: 554 LIGTAHGQQIENVMKNPTLSDLIGGIESVTLGDYEARARKCQKTILERKAPPTFDFLIEM 613
Query: 358 VSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEK 400
+ + H + +VD +L G+ P VE+R+ + + K +EK
Sbjct: 614 RDR-HYWITHQTDKSVDILLRGKTPQVEVRK-RDEKCKVVIEK 654
>gi|356576569|ref|XP_003556403.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 393
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 243/335 (72%), Gaps = 4/335 (1%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDC 125
V+++ D +L LL +LP ++ + P +L+EV++DLGR P AR+ G SL +
Sbjct: 52 VHNNQDDDLQALLQILPSDLHHNLLNQPNRPQLLEVILDLGRFPEARYLGKHGGHSLRNT 111
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
++TV +E+A VG+F DNRAGI TLHRISAIR+R G I+GLTCRVGRAV+G +++
Sbjct: 112 EVTVKELEYAEQAVGEFGKDNRAGIEGTLHRISAIRSRNGHIVGLTCRVGRAVTGQIDMV 171
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
DL+Q G S+LF+G PGVGKTT++REIARVL+++ KRV+IVDTS+EIGG+G+IPH IG
Sbjct: 172 YDLLQYGKSILFVGRPGVGKTTVMREIARVLSDELHKRVVIVDTSNEIGGDGNIPHAAIG 231
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
ARRMQVP MQH+V+IEAVENHMP+VIV+DEIGT+ EA A +IA+RGI L+ TAHG
Sbjct: 232 GARRMQVPEPSMQHRVMIEAVENHMPEVIVVDEIGTEAEAHACRSIAERGIMLIGTAHGQ 291
Query: 306 TIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRV 365
+EN+I NP+L LIGG+++VTLGD EA R QKT+LERK P TF +E+ +
Sbjct: 292 QLENIIKNPTLSDLIGGIESVTLGDAEARARNSQKTILERKAPPTFDFLIEMRDRHYWLT 351
Query: 366 HHSLEATVDAILSGRIPNVEIRRMQHDGSKETVEK 400
H + + +VD +L G P VE+R+ + + K +EK
Sbjct: 352 HQT-DKSVDMLLRGISPQVEVRK-RDEKCKVVIEK 384
>gi|310817928|ref|YP_003950286.1| single-stranded nucleic acid binding r3h [Stigmatella aurantiaca
DW4/3-1]
gi|309391000|gb|ADO68459.1| Single-stranded nucleic acid binding R3H [Stigmatella aurantiaca
DW4/3-1]
Length = 544
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 228/546 (41%), Positives = 318/546 (58%), Gaps = 45/546 (8%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQIT 128
+DDF + L+A+LP ++ V E++EVVMDLGR P AR G L++ I
Sbjct: 27 DDDFLL----LVAVLPSSLQAAVRGLTP-AEVLEVVMDLGRPPEARLVHGSVRLTEALIV 81
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL 188
+EH +QVG DNRAGI RTLHR+SAIRNRKG ++GLT RVGRAV G+ ++L+DL
Sbjct: 82 QADLEHVLAQVGPPGEDNRAGIERTLHRVSAIRNRKGRVVGLTLRVGRAVFGTIDMLKDL 141
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+ G ++L +G PGVGKTT +RE+ARVLA+D +KRVM+VDTS+EIGG+GDIPHPGIG AR
Sbjct: 142 IGTGRNVLLLGRPGVGKTTKLREVARVLADDLRKRVMVVDTSNEIGGDGDIPHPGIGGAR 201
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
RMQV + QH V+IEAVENHMP+ I++DEIGT EA AA TIA+RG+QLVATAHG T+E
Sbjct: 202 RMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAHGNTLE 261
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
NL++NP+L L+GGV VTL DEEA RR QKTV ERK P TF V++V + E+ VH
Sbjct: 262 NLVLNPTLSDLVGGVHTVTLSDEEARRRNTQKTVSERKAPPTFDLVVQMVGRDEVLVHRD 321
Query: 369 LEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTG 428
VD +L+G+ E RR+ H+G E+ VE +
Sbjct: 322 TAEAVDRLLAGQEVGGE-RRLLHEG-------------------EVRVEPVPQAVA---- 357
Query: 429 KIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADAL 488
+ RLY + + + +++++L+++ ++ + AD +
Sbjct: 358 --PLPAPRSKAAPPAPAPAQGPPRLYPHAVSRDLLDRVLRELKVE--ARVVGRLESADIV 413
Query: 489 LALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKIN 548
L + S+ + ++ + + K SS ++ + LR G F D+
Sbjct: 414 LTVRSR-ANDPKMRRVVERTGARVEVVKRSSSAELRRVLR-------GAFLLAEGVDEEL 465
Query: 549 LSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDAR 608
L E A+ EA AI++ V+ +G SV L PRP + +Q L+ +Y L +G EP
Sbjct: 466 LRE---AVAEAEHAIQR-VLNEGVSVPLAPRPPRLRKLQHRLVSRYPLETVSLGSEPLRH 521
Query: 609 LRILPF 614
L I P
Sbjct: 522 LVIYPL 527
>gi|357160507|ref|XP_003578787.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 388
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/320 (54%), Positives = 235/320 (73%), Gaps = 3/320 (0%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHI 132
+L LL +LP ++R + P +L+EV++DLGR+P ARF SG L D +I+ +
Sbjct: 54 DLAELLQILPTDLRDNLKNEPRRDQLLEVILDLGRRPEARFLGNSGGQYLRDSEISQLEL 113
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
E A VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+
Sbjct: 114 EEAQKAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVNGHVDMVRDLLNYK 173
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+LF+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GDIPH IG ARRMQV
Sbjct: 174 ESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQV 233
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
P MQH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I
Sbjct: 234 PEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIK 293
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP L LIGGV+ VTLGDEEA R QK++LERK P TF +E+ + V H E +
Sbjct: 294 NPVLSDLIGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRER-HYWVTHRTERS 352
Query: 373 VDAILSGRIPNVEIRRMQHD 392
VD +L G+ P VE+R+ ++
Sbjct: 353 VDMLLHGKKPLVEVRKRDNE 372
>gi|317968814|ref|ZP_07970204.1| ATPase [Synechococcus sp. CB0205]
Length = 318
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/312 (57%), Positives = 223/312 (71%), Gaps = 4/312 (1%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ DD D RLL +LPE +R + +L+EVV+DLGR P AR+P L I
Sbjct: 11 ITDDLD----RLLEVLPEAVRSALGSAEAREQLLEVVLDLGRIPEARYPGRAVPLGANPI 66
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ Q+G F DNRAGI RTLHRISAIRNR G ++GLTCRVGRAV G+ +++D
Sbjct: 67 ERSDLAAVVEQLGTFGGDNRAGIERTLHRISAIRNRSGDVVGLTCRVGRAVFGTVAMVRD 126
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L+ G SLL +G PGVGKTT +REIARVLA++ KRV+++DTS+EI G+GDIPHP IG A
Sbjct: 127 LMDSGQSLLLMGRPGVGKTTALREIARVLADELDKRVVVIDTSNEIAGDGDIPHPAIGRA 186
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV E+QH+V+IEAVENHMP++IVIDEIGT+LEA AA TIA+RG+ LVATAHG +
Sbjct: 187 RRMQVTRPELQHQVMIEAVENHMPEIIVIDEIGTELEAQAARTIAERGVMLVATAHGNEL 246
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
NL+ NP+L L+GG+++VTLGDEEA RR QKTVLER TF AVE+ S+ VH
Sbjct: 247 ANLVKNPTLSDLVGGIESVTLGDEEARRRRTQKTVLERAAEPTFPMAVEMHSRDRWLVHR 306
Query: 368 SLEATVDAILSG 379
+ TVD +L G
Sbjct: 307 DVARTVDLLLRG 318
>gi|326506502|dbj|BAJ86569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 236/320 (73%), Gaps = 3/320 (0%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHI 132
+L LL +LP+++R + P +L+EV++DLGR+P ARF SG L D +I+ +
Sbjct: 53 DLSELLQILPKDLRDNLQNEPRRDQLLEVILDLGRQPEARFLGNSGGQYLRDNEISQLEL 112
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
E A VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+
Sbjct: 113 EEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRVGRAVNGHVDMVRDLLNYK 172
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+LF+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GDIPH IG ARRMQV
Sbjct: 173 ESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQV 232
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
P MQH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I
Sbjct: 233 PEPSMQHRVMIEAVENHMPEVVIVDEIGTESEAQACRSIAERGVMLIGTAHGERLANIIK 292
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP L L+GGV+ VTLGDEEA R QK++LERK P TF +E+ + V H E +
Sbjct: 293 NPVLSDLVGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRER-HYWVTHRTERS 351
Query: 373 VDAILSGRIPNVEIRRMQHD 392
VD +L G+ P VE+R+ ++
Sbjct: 352 VDMLLHGKKPLVEVRKRDNE 371
>gi|383788423|ref|YP_005472992.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
gi|381364060|dbj|BAL80889.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
Length = 496
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 213/535 (39%), Positives = 306/535 (57%), Gaps = 54/535 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
L +LP+ ++ ++ + + LIEVV+DLGRKP ARF + L + +T I +
Sbjct: 13 FLEILPKNIKEKLEDIGDFDNLIEVVLDLGRKPEARFTNRTVYLREDPVTKDEINETLQK 72
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
+G F D+RAGI +TLHRIS + NR+G +IGLTCRVGRAV G+ ++L+D+V +LL +
Sbjct: 73 IGVFDRDHRAGIEKTLHRISGVFNRRGEVIGLTCRVGRAVYGTVDILKDIVTSDRNLLLL 132
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G PGVGKTT++RE ARVL+ + KRV+++DTS+EIGG+GDIPHPGIGNARRMQVP Q
Sbjct: 133 GRPGVGKTTLLREAARVLSTELGKRVIVIDTSNEIGGDGDIPHPGIGNARRMQVPFGTAQ 192
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
+V+IEAVENH P+VI+IDEIG EA A TIA+RG++L+ATAHG +IENL++NP+L+
Sbjct: 193 EEVMIEAVENHFPEVIIIDEIGRAEEAKACRTIAERGVRLIATAHGTSIENLLVNPTLQD 252
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
LIGG+ +VTL DEEA RRG QKTVLERK P TF +EI + ++H + TVDA+L
Sbjct: 253 LIGGITSVTLSDEEAARRGTQKTVLERKSPPTFDTLIEIRERGVFAIYHDVAETVDALLR 312
Query: 379 GRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGKIQFISEFPP 438
G EIR+ G E+E E E + + E
Sbjct: 313 GFPVFPEIRK---SGESLKFEQEKLREEKGSTEQKEIHE--------------------- 348
Query: 439 NIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKN 498
+R++ GI + + + + +++ + NI +++ ++ L+K
Sbjct: 349 ------------LRIFPLGINASYIERALHSIRLKG--KTVKNIEQSNLIICDKKSLEKR 394
Query: 499 SGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKINLSEKIDALEE 558
I A + IPI + +SL ++ LI K+L+++ K S +E
Sbjct: 395 KEILEYASTLQIPIRIVERNSL----GGIKDLI-------KELKNKGKPRTSIDFKEVEN 443
Query: 559 ARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
+ ++ +PK L L DLI KY L + VG +P RL I P
Sbjct: 444 IVEEVLELGVPKEIEGNLEE-----LQETADLIEKYGLVTELVGLKPHIRLIIYP 493
>gi|297734733|emb|CBI16967.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 183/370 (49%), Positives = 250/370 (67%), Gaps = 17/370 (4%)
Query: 29 THFPYLRSSPNSTFFIEE--------FSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLL 80
T FP S P S F I + R + S + + +V DDF L
Sbjct: 7 TFFPI--SKPFSIFHIHTSISLRINPWPPIRRRMVSKASHSAHLGLAVQDDFHA----FL 60
Query: 81 ALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQ 138
+LP ++R + P+ +L+EV++DLGR P AR+ G L D Q+++ +E+A +
Sbjct: 61 EILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGGKYLRDTQVSMEELEYAQNA 120
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
VG+F DNRAGI TLHRISAIR+R G I+GLTCRVGRAVSG ++++DL+ G S+LF+
Sbjct: 121 VGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVSGHVDMIRDLLPFGESILFV 180
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G PGVGKTT++REIARVL+++ +RV+IVDTS+EIGG+GDIPH IG ARRMQVP MQ
Sbjct: 181 GRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQ 240
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
H+++IEAVENHMP+VI++DEIGT+ EA+A +IA+RGI L+ TAHG +EN+I NP+L
Sbjct: 241 HRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSD 300
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GG++ VTLGD EA R QK++LERK TF +E+ + V H + +VD +L
Sbjct: 301 LVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRER-HYWVTHWTQRSVDMLLH 359
Query: 379 GRIPNVEIRR 388
G+ P VE+RR
Sbjct: 360 GKRPLVEVRR 369
>gi|77553351|gb|ABA96147.1| expressed protein [Oryza sativa Japonica Group]
Length = 395
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 65 SYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSL 122
S V DD L LL +LP ++R + P +L+EV++DLGR+P ARF SG L
Sbjct: 55 SVVVEDD----LYELLQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYL 110
Query: 123 SDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSA 182
D +I+ +E A VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G
Sbjct: 111 RDSEISQQELEEAQRAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHV 170
Query: 183 NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP 242
++++DL+ S+LF+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GDIPH
Sbjct: 171 DMVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHA 230
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
IG ARRMQV MQH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TA
Sbjct: 231 AIGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTA 290
Query: 303 HGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTE 362
HG + N+I NP+L LIGGV+ VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 291 HGEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRER-H 349
Query: 363 LRVHHSLEATVDAILSGRIPNVEIRR 388
V H E +VD +L G+ P VE+R+
Sbjct: 350 YWVTHRTERSVDMLLHGKKPLVEVRK 375
>gi|299830371|ref|YP_003734586.1| hypothetical protein KrfoC_p076 [Kryptoperidinium foliaceum]
gi|297385073|gb|ADI40371.1| conserved hypothetical protein [Kryptoperidinium foliaceum]
Length = 455
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/463 (40%), Positives = 295/463 (63%), Gaps = 13/463 (2%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+N + D+E +L+ LP ++ + +H ELIE+V+DLGR+P ARF G LS I
Sbjct: 1 MNTNNDLE--KLIENLPSFIQDYLHQHGYQNELIEIVLDLGRRPEARFTYGPEYLSQKII 58
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ +++ T ++ F+ +NRAGI RTLHRIS IRNR+ I GLTCR+GRA+ G+ ++++D
Sbjct: 59 SWQDLDYMTQRISKFSNENRAGIERTLHRISCIRNRQFLINGLTCRIGRAIFGTVSVIRD 118
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L++ S+L +G PGVGKTTIIREIARVL+++ ++RV+I+DTS+EI G+ DIPH GIG A
Sbjct: 119 LLESEKSILILGRPGVGKTTIIREIARVLSDEMEQRVIIIDTSNEIAGDSDIPHFGIGRA 178
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV +E QH+V+IEAVENHMPQVI+IDEIGT LE +AA TIA++G++L+ T HG +
Sbjct: 179 RRMQVSKTEFQHQVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLIGTTHGNCL 238
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
ENL+ NPSL LIGG+Q VTL DEEA RRG QK++LERK TF +EI + +H
Sbjct: 239 ENLVKNPSLAELIGGIQYVTLSDEEAKRRGTQKSILERKSYPTFEHVIEINALKSWIIHE 298
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
++ +++D +L ++R++ ++ ++ + + + + +++ + +R
Sbjct: 299 NVSSSIDLLLRNLYETEQLRQI-------SLPEKVAIKYQTTDAYIISSRNSLRPSVKRL 351
Query: 428 GKIQ-FISEF-PPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEA 485
++ S+ I E ++ +Y Y + + + +K++ + LT++I +A
Sbjct: 352 SSLEPLWSDINKSKIQERLHVTAKVLIIYPYSLSHNFIKEAMKKVNI--RFILTNDIKKA 409
Query: 486 DALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALR 528
++ L LK N ++ A+ IPIY+ S+ Q K ++
Sbjct: 410 SLIIGLKKHLKHNLKLKQLAQQKQIPIYSLNQLSIYQFLKLIQ 452
>gi|242083132|ref|XP_002441991.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
gi|241942684|gb|EES15829.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
Length = 372
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 231/314 (73%), Gaps = 3/314 (0%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHI 132
+L LL +LP ++R + P +L+EV++DLGR+P ARF SG L D +I+ +
Sbjct: 56 DLSELLQILPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKEL 115
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
E A VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G +++ DL+
Sbjct: 116 EDAQKAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVHDLLNYK 175
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
S+LF+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GD+PH IG ARRMQV
Sbjct: 176 ESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQV 235
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
P MQH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I
Sbjct: 236 PEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIK 295
Query: 313 NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
NP+L LIGGV+ VTLGD+EA R QK++LERK P TF +E+ + V H E +
Sbjct: 296 NPTLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRER-HYWVTHRTERS 354
Query: 373 VDAILSGRIPNVEI 386
VD +L G+ P VE+
Sbjct: 355 VDMLLHGKKPLVEV 368
>gi|218186582|gb|EEC69009.1| hypothetical protein OsI_37798 [Oryza sativa Indica Group]
Length = 484
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 230/311 (73%), Gaps = 3/311 (0%)
Query: 80 LALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATS 137
L +LP ++R + P +L+EV++DLGR+P ARF SG L D +I+ +E A
Sbjct: 78 LQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQR 137
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF
Sbjct: 138 AVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILF 197
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM 257
+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GDIPH IG ARRMQV M
Sbjct: 198 LGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSM 257
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
QH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I NP+L
Sbjct: 258 QHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLS 317
Query: 318 MLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
LIGGV+ VTLGDEEA R QK++LERK P TF +E+ + V H E +VD +L
Sbjct: 318 DLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRER-HYWVTHRTERSVDMLL 376
Query: 378 SGRIPNVEIRR 388
G+ P VE+R+
Sbjct: 377 HGKKPLVEVRK 387
>gi|359493523|ref|XP_002264380.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
gi|147770825|emb|CAN76429.1| hypothetical protein VITISV_023566 [Vitis vinifera]
Length = 351
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/329 (52%), Positives = 238/329 (72%), Gaps = 7/329 (2%)
Query: 62 SRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGD 119
+ + +V DDF L +LP ++R + P+ +L+EV++DLGR P AR+ G
Sbjct: 9 AHLGLAVQDDFHA----FLEILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGG 64
Query: 120 FSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVS 179
L D Q+++ +E+A + VG+F DNRAGI TLHRISAIR+R G I+GLTCRVGRAVS
Sbjct: 65 KYLRDTQVSMEELEYAQNAVGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVS 124
Query: 180 GSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDI 239
G ++++DL+ G S+LF+G PGVGKTT++REIARVL+++ +RV+IVDTS+EIGG+GDI
Sbjct: 125 GHVDMIRDLLPFGESILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDI 184
Query: 240 PHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLV 299
PH IG ARRMQVP MQH+++IEAVENHMP+VI++DEIGT+ EA+A +IA+RGI L+
Sbjct: 185 PHAAIGGARRMQVPEPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLI 244
Query: 300 ATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVS 359
TAHG +EN+I NP+L L+GG++ VTLGD EA R QK++LERK TF +E+
Sbjct: 245 GTAHGERLENIIKNPTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRE 304
Query: 360 KTELRVHHSLEATVDAILSGRIPNVEIRR 388
+ V H + +VD +L G+ P VE+RR
Sbjct: 305 R-HYWVTHWTQRSVDMLLHGKRPLVEVRR 332
>gi|297612841|ref|NP_001066391.2| Os12g0209000 [Oryza sativa Japonica Group]
gi|255670139|dbj|BAF29410.2| Os12g0209000 [Oryza sativa Japonica Group]
Length = 402
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 233/323 (72%), Gaps = 7/323 (2%)
Query: 65 SYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSL 122
S V DD L LL +LP ++R + P +L+EV++DLGR+P ARF SG L
Sbjct: 55 SVVVEDD----LYELLQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYL 110
Query: 123 SDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSA 182
D +I+ +E A VG+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G
Sbjct: 111 RDSEISQQELEEAQRAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHV 170
Query: 183 NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP 242
++++DL+ S+LF+G PGVGKTT++REIARVLA++++KRV+IVDTS+EIGG+GDIPH
Sbjct: 171 DMVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHA 230
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
IG ARRMQV MQH+V+IEAVENHMP+V+++DEIGT+ EA A +IA+RG+ L+ TA
Sbjct: 231 AIGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTA 290
Query: 303 HGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTE 362
HG + N+I NP+L LIGGV+ VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 291 HGEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRER-H 349
Query: 363 LRVHHSLEATVDAILSGRIPNVE 385
V H E +VD +L G+ P VE
Sbjct: 350 YWVTHRTERSVDMLLHGKKPLVE 372
>gi|255557835|ref|XP_002519947.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223540993|gb|EEF42551.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 412
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 176/329 (53%), Positives = 240/329 (72%), Gaps = 6/329 (1%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS---LSDCQITVHH 131
+L L +LP ++ + +L+EV++DLGR P AR+ G+F L + ++T+
Sbjct: 78 DLQEFLDILPPDLHDILLNDSNRAQLLEVILDLGRLPEARY-LGEFGGRYLRNTEVTMEE 136
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
+E A + VG+F DNRAGI TLHRISAIR+RKG I+GLTCRVGRAVSG +++ DL+
Sbjct: 137 LEFAQNAVGEFGGDNRAGIEGTLHRISAIRSRKGLIVGLTCRVGRAVSGHVDMVHDLLHY 196
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G S+LF+G PGVGKTT++REIARVL++ KRV++VDTS+EIGG+GDIPH +G ARRMQ
Sbjct: 197 GKSILFVGRPGVGKTTVMREIARVLSDKLDKRVVVVDTSNEIGGDGDIPHAAVGGARRMQ 256
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP+ +QHKV+IEAVENHMP+VI++DEIGT+ EA+A +IA+RGI L+ TAHG +EN+I
Sbjct: 257 VPDPSLQHKVMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENII 316
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEA 371
NP+L LIGG++ V LGDEEA R QK++LERKGP TF +E+ + V H E
Sbjct: 317 KNPTLSNLIGGIETVILGDEEARARRSQKSILERKGPPTFYFLIEMRERHHW-VTHLTEK 375
Query: 372 TVDAILSGRIPNVEIRRMQHDGSKETVEK 400
+VD +L G P+VE+RR ++D K +E+
Sbjct: 376 SVDMLLRGENPSVEVRR-RNDQFKVVIER 403
>gi|456062084|ref|YP_007476226.1| Ycf45 (chloroplast) [Pavlova lutheri]
gi|449327271|gb|AGE93827.1| Ycf45 (chloroplast) [Pavlova lutheri]
Length = 369
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 230/310 (74%), Gaps = 4/310 (1%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ +DF+ LL +LP+ ++ + + P++ LIEVV+DLGR P ARF LS+ I
Sbjct: 3 IAEDFE----NLLKVLPQFVQNSLKKDPKVDSLIEVVLDLGRMPEARFLDRPIFLSEHLI 58
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
I+ T +V F+ DNRAGI RTLHRIS+IRNR+ IIGLTCRVGRAV G ++++D
Sbjct: 59 VWKDIDFLTKRVSKFSADNRAGIERTLHRISSIRNRENVIIGLTCRVGRAVLGVISIIRD 118
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L+++ S+L +G PGVGKTT IREI+R+L+++ KRV+I+DTS+EI G+GDIPHP IG+A
Sbjct: 119 LIEEEESILILGKPGVGKTTAIREISRILSDEMGKRVIIIDTSNEIAGDGDIPHPAIGSA 178
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQV + E+QH ++IEAVENHMPQVI+IDEI T+LEA+AA TIA+RG++L+ TAHG ++
Sbjct: 179 RRMQVSHPELQHHIMIEAVENHMPQVIIIDEISTELEALAAQTIAERGVKLIGTAHGNSL 238
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
E+LI NP+L LIGG+Q VTLGDEEA RG QK+VLERK F +EI + VH
Sbjct: 239 ESLIKNPTLSDLIGGIQYVTLGDEEARIRGTQKSVLERKSRPAFKIGLEIGNSKAWAVHP 298
Query: 368 SLEATVDAIL 377
++E VD IL
Sbjct: 299 NIEKAVDQIL 308
>gi|222616800|gb|EEE52932.1| hypothetical protein OsJ_35561 [Oryza sativa Japonica Group]
Length = 451
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/295 (57%), Positives = 224/295 (75%), Gaps = 3/295 (1%)
Query: 96 ELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRT 153
+LYEL++V++DLGR+P ARF SG L D +I+ +E A VG+F DNRAGI T
Sbjct: 61 DLYELLQVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQRAVGEFGGDNRAGIEGT 120
Query: 154 LHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIA 213
LHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF+G PGVGKTT++REIA
Sbjct: 121 LHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLGRPGVGKTTVMREIA 180
Query: 214 RVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
RVLA++++KRV+IVDTS+EIGG+GDIPH IG ARRMQV MQH+V+IEAVENHMP+V
Sbjct: 181 RVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQHRVMIEAVENHMPEV 240
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEA 333
+++DEIGT+ EA A +IA+RG+ L+ TAHG + N+I NP+L LIGGV+ VTLGDEEA
Sbjct: 241 VIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSDLIGGVETVTLGDEEA 300
Query: 334 HRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
R QK++LERK P TF +E+ + V H E +VD +L G+ P VE+R+
Sbjct: 301 RARRSQKSILERKAPPTFPFLIEMRER-HYWVTHRTERSVDMLLHGKKPLVEVRK 354
>gi|224030195|gb|ACN34173.1| unknown [Zea mays]
Length = 442
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/451 (45%), Positives = 283/451 (62%), Gaps = 52/451 (11%)
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
MQVP MQH V+IEAVENHMP+VIVIDEIGT+LEAMAA+TIAQRG+QLV TAHGVTIE+
Sbjct: 1 MQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIES 60
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
+I NP L+ML+GG+++VTLGDEEA +R VQKT+LERKGP TF CAVE++SKTE RVHH L
Sbjct: 61 IIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRL 120
Query: 370 EATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERTGK 429
+ATVDAIL+G+ P E R+M H+ S E + + E + ++ M VT +
Sbjct: 121 DATVDAILAGKPPKFEARKM-HNKSTEFEMPLVIPDREYEIESLPLYQEVM-VTRSLSSD 178
Query: 430 IQFISEFPPN--------IGEDCWEDGL----------------LIRLYVYGILEATVVQ 465
F +F + ED + D L+++Y Y I EA ++Q
Sbjct: 179 GNFSDDFAASRQTKSKSMPSEDNFGDNFVYTRKAKGNKPVHGKSLVQVYTYQISEADILQ 238
Query: 466 LIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITK 525
+ + DD + +TD+I AD +LA S++K+N I AK H +PI+ KT+++ QI K
Sbjct: 239 VATMMGFDDELDVTDDIGAADVILASSSEMKQNPWIHNVAKYHKLPIFVVKTNTMAQIVK 298
Query: 526 ALRALID-DHTG------------EFKDLRSEDKINLSEKIDALEEARVAIEQVVIPKGE 572
A+R ++ D+T E +D + K +L E+IDALEEAR+AIE +VIP GE
Sbjct: 299 AIRMIVGRDNTSSSKQPEVMEGEIEIEDDAPKRKPSL-EEIDALEEARLAIEYIVIPGGE 357
Query: 573 SVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ-TRRDEPRNSGETFDED 631
VELLPR S I++ Q++L+ YQL + G + ++RL+ILP + T+R +++G +
Sbjct: 358 PVELLPRCSEIVARQLELVESYQLLAETFGSDSNSRLQILPMKITKRGSSKDNGAS---- 413
Query: 632 IEFDEFPGS----SSNSNGTRYTVDRLPFLP 658
+ + GS S N G+ ++ RLPFLP
Sbjct: 414 -KPTKQTGSDLIVSENGGGSSFS--RLPFLP 441
>gi|206896224|ref|YP_002246822.1| R3H domain-containing protein [Coprothermobacter proteolyticus DSM
5265]
gi|206738841|gb|ACI17919.1| R3H domain protein [Coprothermobacter proteolyticus DSM 5265]
Length = 515
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 310/545 (56%), Gaps = 41/545 (7%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ D+ D LG L + E++R+ +P L +L+++V+DL R + RF S +
Sbjct: 6 ITDNLDEVLGILPPWIAEKLRM----NPMLSDLVDIVLDLKRPVVIRFSSSQEVWESDLV 61
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ I++ +G F DNRAG+ TLHRIS IRNR+G IIGL+ R+GRA+ G + L
Sbjct: 62 SEDDIQYVVQHIGTFGKDNRAGLEGTLHRISCIRNRQGRIIGLSIRIGRAIYGVVDPLTP 121
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
S+L +G PGVGKTT++RE+AR+L+ DY+KRV++VDTS+EI G+GD+PHP IG A
Sbjct: 122 YFTQEKSVLLMGKPGVGKTTLLREVARLLSVDYQKRVIVVDTSNEIAGDGDVPHPAIGLA 181
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRMQVP E QH V+IEAVENHMP+VI++DEIG K E AA TIA+RG+QL+ATAHG T+
Sbjct: 182 RRMQVPVPEQQHDVMIEAVENHMPEVIIVDEIGRKEEVDAARTIAERGVQLIATAHGNTL 241
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
EN+++NP+L L+GGVQ VTL DEEAHRRG QKT+LERK TF +EI ++ +H
Sbjct: 242 ENILVNPTLSDLVGGVQVVTLSDEEAHRRGTQKTILERKTSPTFDILIEIRARGVYAIHE 301
Query: 368 SLEATVDAILSGRIPNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMMVEDAMEVTEERT 427
+E VD++L G PN + R++ DG TVE + E + A+EV E
Sbjct: 302 DVERAVDSLLRGIPPNPLVLRVKDDG---TVESGY----------EQTLPPAVEVASEEI 348
Query: 428 GKIQFISEFPPNIGEDCWEDGLLIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADA 487
G + G IR+ G+ + + + I L + + + + +AD
Sbjct: 349 GAGRKRGRR-----------GGEIRILPLGLSRSKLEKAIANLGVPAVI--VEEVDDADM 395
Query: 488 LLALHSKLKKNSGIQAAAKSHDIPIYATKTSSLVQITKALRALIDDHTGEFKDLRSEDKI 547
+L L S + K AK+ ++PI K++++ Q+ L L L E
Sbjct: 396 VLTLRSHMNKGYQRLREAKAKNVPIKTIKSNTMSQMEDFLTTLF--------SLTPE--- 444
Query: 548 NLSEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDA 607
+ +++ + + EL P P I +Q +LI KY L VG+EP
Sbjct: 445 QMEAEVEEALREAEEAAMHTVEDQKRRELRPAPHRIRRLQHELIAKYGLLSFSVGEEPYR 504
Query: 608 RLRIL 612
R+ ++
Sbjct: 505 RVVVI 509
>gi|442324641|ref|YP_007364662.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
gi|441492283|gb|AGC48978.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
Length = 604
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 232/323 (71%), Gaps = 7/323 (2%)
Query: 59 FSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSE-HPELYELIEVVMDLGRKPLARFPS 117
+ SRV + DDF + + +LPEE+R V PE +++EVV+DLGR P AR
Sbjct: 1 MTSSRVDAAAADDFRL----WVEVLPEELRAVVRALAPE--QVLEVVLDLGRVPEARLVD 54
Query: 118 GDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRA 177
+L + + + +QVG DNRAGI RTLHR+SAIRNR+G ++GLT RVGRA
Sbjct: 55 RVVTLRESPVGPEDLAQVMAQVGPPGEDNRAGIERTLHRVSAIRNRRGQVVGLTLRVGRA 114
Query: 178 VSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
V G+ ++L+DL+ G ++L +G PGVGKTT +RE+ARVLA+D KRVM+VDTS+EIGG+G
Sbjct: 115 VYGTIDMLKDLIGSGRNVLLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDG 174
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
D+PHPGIG ARRMQV + QH V+IEAVENHMP+ I++DEIGT EA AA TIA+RG+Q
Sbjct: 175 DVPHPGIGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQ 234
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
LVATAHG T+ENL++NP+L L+GGV VTL D+EA RR QKTV ERK P TF VE+
Sbjct: 235 LVATAHGNTLENLVLNPTLSDLVGGVHTVTLSDDEARRRRTQKTVSERKAPPTFDIVVEM 294
Query: 358 VSKTELRVHHSLEATVDAILSGR 380
V++ E+RVH VD +L+G+
Sbjct: 295 VNRDEVRVHADTAEAVDRLLAGK 317
>gi|303287638|ref|XP_003063108.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455744|gb|EEH53047.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 766
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 239/431 (55%), Gaps = 98/431 (22%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
EL +L+ LLP + + H + EL+EVV+DLGR PLARF D +LSD +T I
Sbjct: 132 ELEQLINLLPPAIASALLAHAQKLELVEVVLDLGRVPLARFGGADVALSDAPLTHDDIAR 191
Query: 135 ATSQVGDFAVDNRAGISRTLHRI------------------------------------- 157
A S VGD DNRAGI RTLHRI
Sbjct: 192 ALSNVGDVGADNRAGIDRTLHRIRRVLLTLVLIRLRPRGARRSLRTFAGVSLRARHGFDP 251
Query: 158 --------SAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTII 209
+RNR G I+G+TCRVGRA+ G A++++DL+ G S+L +G PGVGKTT I
Sbjct: 252 DAPRRLSTPVMRNRAGVIVGMTCRVGRAIEGGADMIRDLLVSGRSVLLLGRPGVGKTTAI 311
Query: 210 REIARVLA---------------------------------------------------- 217
REIARVL+
Sbjct: 312 REIARVLSGASYLTLDFSRRLSPPRVPRFQSRHTSTPFNSASDAFQLHPFNVRSYGQLPS 371
Query: 218 NDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+D +RV++VDTS+EIGG+GD+PHPGIG ARRMQV QH LIEAV+NH PQV+V+D
Sbjct: 372 DDCGRRVVVVDTSNEIGGDGDVPHPGIGGARRMQVTEPSEQHATLIEAVQNHTPQVVVVD 431
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRG 337
EIGT+LE AA TI+QRG+Q++ATAHG T+EN++ NPSL L+GGV +VTLGD+EA +R
Sbjct: 432 EIGTELECAAARTISQRGVQMIATAHGHTLENVLKNPSLNDLVGGVVSVTLGDDEARKRR 491
Query: 338 VQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKET 397
QKT LER+GP TF AVEI + VH + VD +L+G P VE+R + D +
Sbjct: 492 AQKTTLEREGPPTFGAAVEIRETGKWVVHLDVGVAVDTLLAGYAPPVELRSVD-DATGRV 550
Query: 398 VEKEFFAETSS 408
+ + + + S+
Sbjct: 551 MSRSWLGDDSA 561
>gi|242624308|ref|YP_003002226.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
gi|239997416|gb|ACS36938.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
Length = 340
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/324 (50%), Positives = 232/324 (71%), Gaps = 1/324 (0%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
L+ + P ++ + HP L ELIE++ D+G+ P RF S LS I+ + + ++
Sbjct: 11 LIDIFPYFVQKPLKNHPLLDELIEIIFDIGKCPEVRFSSKIEVLSYRVISKQDMNYCLTK 70
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
+ +F NRAGI RTLHRIS +RNR IIGLTCRVGR+V G N ++D++ S+L +
Sbjct: 71 ISNFNEKNRAGIKRTLHRISCLRNRDDQIIGLTCRVGRSVIGLTNKIRDILLLNRSILIL 130
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G PGVGKTTIIREIAR+L+N+ +KRV+IVDTS+EI G+ D+PH +G ARR+QV NS +Q
Sbjct: 131 GRPGVGKTTIIREIARILSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKNSNLQ 190
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
H+ LIEAVENHMP+VI+IDEIGT++EA++A TIA+RG+QL+AT HG +ENLI NP L
Sbjct: 191 HQSLIEAVENHMPEVIIIDEIGTEIEALSARTIAERGVQLIATTHGNHLENLIKNPILMD 250
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
LIGG+Q+VTL D+EA R +K++LERK +TF+ +EI + ++ ++E +VD +L
Sbjct: 251 LIGGIQSVTLSDQEAKNRHTKKSILERKFAATFNIIIEINNYNSWTIYENVEESVDFLLK 310
Query: 379 GRIPNVEIRRMQHDGSKETVEKEF 402
G+ PN ++R M DG K T+ ++
Sbjct: 311 GQEPNKQVRTMLSDG-KYTIVSDY 333
>gi|403225170|gb|AFR24782.1| conserved hypothetical plastid protein Ycf45 [uncultured
Pelagomonas]
Length = 330
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 219/313 (69%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L L+++ P+ ++I + + +L+E+V D+G+ P ARF SG L+ I + +
Sbjct: 6 DLISLISVFPDFVQIPLKSYSTNSKLMEIVFDIGKYPEARFTSGVVILAPRIICRQDMHY 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++ F NRAGI++TLHRIS ++NR+ IIGLTCRVGR++ GS N ++D++ S
Sbjct: 66 VLKRITAFNDKNRAGINKTLHRISCLKNREDQIIGLTCRVGRSIIGSTNKIRDILLHDKS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PG GKTTIIREIAR+ +N+ +KRV+IVDTS+EI G+ D+PH +G ARR+QV
Sbjct: 126 ILILGKPGSGKTTIIREIARIFSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKK 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
++QH+VLIEAVENHMP+VI+IDEI T+ E ++A TIA+RG+QL+ATAHG ++ NL+ NP
Sbjct: 186 FDLQHQVLIEAVENHMPEVIIIDEISTETETLSARTIAERGVQLIATAHGNSLVNLVKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L LIGG+Q+VTL D+ A R +K+VLER+ +TF +EI S ++ +E VD
Sbjct: 246 ILVNLIGGIQSVTLSDQSAKLRNTKKSVLERQFAATFDLIIEISSSDSWIIYDKVEEAVD 305
Query: 375 AILSGRIPNVEIR 387
IL+G N + R
Sbjct: 306 LILNGENTNGQAR 318
>gi|11465517|ref|NP_045092.1| hypothetical protein CycaCp075 [Cyanidium caldarium]
gi|14424118|sp|O19920.1|YCF45_CYACA RecName: Full=Uncharacterized protein ycf45
gi|2465740|gb|AAB82669.1| unknown [Cyanidium caldarium]
Length = 335
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 218/319 (68%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+L L ++P + + +HP + L E+V+D GR+ R+ +L+ +IT H+
Sbjct: 6 DLRHFLPVVPRFVYKSLKKHPRKFGLTEIVLDNGRRAEGRWREKTENLTHKKITKKHLLR 65
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
++G F DNRAGI +TLHRIS I+NR G I+GLT R+GR G +++DL++ S
Sbjct: 66 CIKKIGIFNEDNRAGIYQTLHRISCIKNRYGNIVGLTYRIGREFIGIGPIIRDLIESNQS 125
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
L IG PG+GKT+ IREI+R+L+N+ KRV+IVD+++EI G G PH G ARRM+V +
Sbjct: 126 TLLIGRPGIGKTSFIREISRILSNEIMKRVIIVDSANEISGEGCCPHISTGKARRMEVQS 185
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
QH+V+IEA+ENH P++I+IDEIGT+ E+ AA +I+QRGI+L+ +AH + NL NP
Sbjct: 186 INSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAHSSDLFNLAKNP 245
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
+L L+GG+++VTL D +A R +KT+LERKG S F+ +EI K ++V+ S+E ++D
Sbjct: 246 TLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTVKVYTSVEQSID 305
Query: 375 AILSGRIPNVEIRRMQHDG 393
AIL GR+ N +IR M+ +G
Sbjct: 306 AILEGRVNNSQIRSMKLNG 324
>gi|440792694|gb|ELR13902.1| sporulation proteinrelated, putative [Acanthamoeba castellanii str.
Neff]
Length = 786
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/324 (45%), Positives = 202/324 (62%), Gaps = 32/324 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH 134
+LG +L LPE +R + L+ L+E+V+DLGR +ARF SG +I+
Sbjct: 430 DLGLILDALPEHLRDALLADGRLHGLVEIVLDLGRPLMARF-SGPGLPRVAEIS------ 482
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG-- 192
R G + NR G ++GLT RVG+ + G ++ D++
Sbjct: 483 -----------GRGGEGENV-------NRSGDVVGLTIRVGKTLRGLVTMVADVLARAAP 524
Query: 193 --ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
AS+L +G PG+GKT++IRE+AR LA ++ VMIVDTS+EI G+GDIPHP IG ARRM
Sbjct: 525 CKASILLLGAPGMGKTSVIREMARELAREWS--VMIVDTSNEIAGDGDIPHPAIGAARRM 582
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QVP + QHK +IEAV+NH P VI++DEIGT EA A TIA+RG+ LVATAHGVT+ ++
Sbjct: 583 QVPQASEQHKRMIEAVQNHTPDVIIVDEIGTAEEAKACCTIARRGVMLVATAHGVTLSDV 642
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAHRRG-VQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
+ NPSL ++GGV+ V L D A RG QKTV E +GPS F A+E+ S++E VH +
Sbjct: 643 VDNPSLNSVVGGVEAVILSDAAALARGSAQKTVRESRGPSAFGLAIELRSRSEWVVHDDV 702
Query: 370 EATVDAILSGRIPNVEIRRMQHDG 393
A V+ +L+G+ VE+RR DG
Sbjct: 703 RANVNRLLAGKPMAVEVRRRLADG 726
>gi|440794844|gb|ELR15989.1| R3H domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 441
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 216/349 (61%), Gaps = 45/349 (12%)
Query: 55 SSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELY-----ELIEVV----- 104
+S LF++ V +N FD ++G + + ++ ++ ++ +LY EL + V
Sbjct: 81 ASALFAEHGVL--LNHVFDTQVGHSVLTVGKQNQVGLNPMLKLYANSQNELKKAVKKAWT 138
Query: 105 ---MDLGRKPLARFPSGDFSLS------------DCQIT-VHHIEHATSQ-VGDFAVDNR 147
+ R+PL G SL + +IT VH + ++ VG +DNR
Sbjct: 139 RDRLYWTRRPLTEEMVGYASLDSPAQAPPPRWGEEWEITRVHELTRTVNEMVGWGGLDNR 198
Query: 148 AGISRTLHRISAIRNRKGAIIGLTCRVGRAVSG----SANLLQDLVQDGASLLFIGPPGV 203
AG+S+TLHRIS ++N+ G +G+T RVG+ +SG A++LQ + AS+L +G PG+
Sbjct: 199 AGLSKTLHRISRLQNQAGQAVGVTIRVGKTISGLVPMVADVLQRAAERKASILLLGSPGM 258
Query: 204 GKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLI 263
GKT+++RE+AR LAN++ VMIVDTS+EI G GDIPH IG ARRMQV QHK +I
Sbjct: 259 GKTSVLREMARELANEWS--VMIVDTSNEIAGAGDIPHTAIGEARRMQVLPGSGQHKCMI 316
Query: 264 EAVENHMPQVIVIDE---------IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
EAV+NH P +I++DE IGTK EA A TIA+RG+ LVATAHG+T+++++ NP
Sbjct: 317 EAVQNHTPDIIIVDEVCPISEWPCIGTKSEAAACCTIARRGVMLVATAHGLTLQDVVDNP 376
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQ-KTVLERKGPSTFSCAVEIVSKTE 362
L ++GGVQ+VTLGD+ RG + KTV E KGPS F+ A+E+ S+ E
Sbjct: 377 GLNSVVGGVQSVTLGDDAVRERGAKHKTVRECKGPSAFAVAIELRSRRE 425
>gi|290985586|ref|XP_002675506.1| predicted protein [Naegleria gruberi]
gi|284089103|gb|EFC42762.1| predicted protein [Naegleria gruberi]
Length = 508
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 194/313 (61%), Gaps = 12/313 (3%)
Query: 75 ELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPL-ARFPSGDFSLSDCQITVHH 131
+L L + P E R++ L +L+E+VMD+ +KPL + D C I +
Sbjct: 171 QLDELFEIFPIEFAERVKAKCGENLDQLVEIVMDI-KKPLRLYYYQQDEKDETCTID-YQ 228
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
I ++ Q F D+RAGIS TLHR+S I +R G +IGLT R+GRAV G L +D+
Sbjct: 229 ILNSICQNLIFGQDDRAGISGTLHRVSRITSRIGNVIGLTIRIGRAVVGIGELFKDVTNS 288
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
++L +G P GK+T+IR+++RVL+ + RV+IVDTS EI G GD+PH G++RR+
Sbjct: 289 NENILLVGIPNSGKSTLIRDLSRVLSE--QNRVVIVDTSCEIAGLGDVPHSATGDSRRIP 346
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
V + + Q ++ AV+NH PQVIVIDEI E TI+QRG++L A+AHG T+E L+
Sbjct: 347 VKDPKNQRVDMLRAVQNHSPQVIVIDEISDSKEVQTCRTISQRGVRLCASAHG-TLEKLL 405
Query: 312 MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSK----TELRVHH 367
+NP L L+GGV +VT+ D+ A ++G QK + + KG F +E+ TE +++
Sbjct: 406 VNPVLRDLLGGVGDVTVSDDSARQKGGQKIINQMKGSPIFGIIIEVKKSQNGDTEWIIYN 465
Query: 368 SLEATVDAILSGR 380
+++ TV +IL+G+
Sbjct: 466 NVKETVRSILNGQ 478
>gi|290995997|ref|XP_002680569.1| predicted protein [Naegleria gruberi]
gi|284094190|gb|EFC47825.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/299 (44%), Positives = 187/299 (62%), Gaps = 21/299 (7%)
Query: 71 DFDI----ELGRLLALLPEEMRIRVS--EHPELYELIEVVMDLGRKPLARF------PSG 118
DF++ ++ L L P++++ ++S ++ LIEV MD GR P F P
Sbjct: 14 DFNVTIINQIYSFLDLFPKKIQEQLSTISGEDVNNLIEVAMDKGR-PYELFFYHKKEPYS 72
Query: 119 DFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAV 178
+ + Q + I + S F DNRAG+ +LHRISA+ NR+ IIGLT RVGRAV
Sbjct: 73 NPTFIVKQEEIDEIVNKLS----FGTDNRAGMDGSLHRISAMLNREAKIIGLTLRVGRAV 128
Query: 179 SGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGD 238
G A + DL+++G S+L +G PG GKTT IR+ A+ L+ +RV++VDTS EIGG GD
Sbjct: 129 MGRAKVFSDLIEEGKSILLLGKPGAGKTTFIRDFAKTLSE--SRRVVVVDTSCEIGGFGD 186
Query: 239 IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQL 298
IPH IG ARRMQV + Q +V+I+AV+NH P+VIVIDEIGTK E A TI+QRG+ L
Sbjct: 187 IPHVAIGKARRMQVADIRRQQEVMIQAVQNHTPEVIVIDEIGTKDEVSTARTISQRGVIL 246
Query: 299 VATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
+AHG +++++ NP L L+GGV++V +GD A R G +K L+ K F +++
Sbjct: 247 CGSAHG-DMKSILKNPILCDLLGGVESVIMGDRNASRDG-EKMRLQLKADPVFDVVIQL 303
>gi|307109172|gb|EFN57410.1| hypothetical protein CHLNCDRAFT_21069 [Chlorella variabilis]
Length = 258
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 164/250 (65%), Gaps = 13/250 (5%)
Query: 148 AGISRTLHRISAIRNRKGAIIGLTCRVGRAVSG-----------SANLLQDLVQDGASLL 196
AGI TLHR+SA+R+R+G I GLT RVGR V G +A S +
Sbjct: 10 AGIPGTLHRVSAMRDRQGGIAGLTYRVGRHVPGGPPPPAADGCVAACAHSSSSCCCCSSI 69
Query: 197 FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE 256
G PGVGKTT++R++A +L++ + ++V++VDTS+E+ G+G PH IG+ARRM VP+
Sbjct: 70 LQGGPGVGKTTLLRDVASLLSDTFSQKVVVVDTSNEVAGDGSEPHACIGSARRMMVPSQ- 128
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
QH V+IE V+NHMP V+++DEIGT E A +IA RG+ LV TAHG +++ L+ NP L
Sbjct: 129 -QHSVMIETVQNHMPDVVIVDEIGTAREVEACRSIAHRGVVLVGTAHGRSLKALMRNPDL 187
Query: 317 EMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAI 376
LIGG+ VTLGDEEA R KT ER+G FS VE++S++ RVH S+ +VD +
Sbjct: 188 NGLIGGIHQVTLGDEEARRSNHGKTRTERRGEPAFSTLVEVLSRSRWRVHMSVARSVDDM 247
Query: 377 LSGRIPNVEI 386
L+GR + E+
Sbjct: 248 LAGRWEDGEV 257
>gi|301109912|ref|XP_002904036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096162|gb|EEY54214.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 187/334 (55%), Gaps = 15/334 (4%)
Query: 69 NDDFDIELGRLLALLPEEMRIRVSEHPEL-YELIEVVMDLGRKPLARFPSGD---FSLSD 124
N + EL LL LLP R V E + L+++ +D+GR P A +
Sbjct: 50 NLELQCELDSLLKLLPGSYRDAVREVDNYHFRLVDICIDVGRAPFAYTGKKQRVLLTKDG 109
Query: 125 CQITVHHIEHATSQVGD---FAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
++ I+ +G DNRAGI R HRIS +R++ + GLT RVGRA+ +
Sbjct: 110 SVVSKETIDEVVKNLGGEMRIGNDNRAGIDRQRHRISVMRSKTDEVYGLTMRVGRALRNA 169
Query: 182 ANLLQDLV----QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
A +L DL+ S+L +G PG GKTT+IR++AR ++ + + V I+DTS+EIGG+G
Sbjct: 170 ACVLTDLLLSNKHANKSVLVLGHPGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDG 228
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
+PH +G ARRM VP+ E Q V++E V+NH + +++DEIG K E +AAST+ QRG +
Sbjct: 229 LVPHECVGWARRMMVPSLEAQAGVMVECVQNHTVETLIVDEIGRKAEVLAASTVRQRGPR 288
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
L+A+AHG LI NP L+ L+GG Q VT+GD+EA K +R G F VE+
Sbjct: 289 LIASAHG-DFRALIKNPDLKGLVGGSQQVTIGDKEAKSLNKGKLQTQRAGNPIFDVIVEL 347
Query: 358 --VSKTELRVHHSLEATVDAILSGRIPNVEIRRM 389
V + R+ + VD +L G E RR
Sbjct: 348 DHVVRGRCRIIWDVATAVDNVLEGNDYAFETRRW 381
>gi|384432170|ref|YP_005641529.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333967638|gb|AEG34402.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
Length = 310
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 187/318 (58%), Gaps = 21/318 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ + FD E L+ LP +R V H E E+ MDLG PLA G+ SD +I
Sbjct: 4 LREGFDREFAALMEKLPPWVRKEVEPHGARLE--EIAMDLG-APLAYTVDGEARYSDREI 60
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T + +VG F +NRAGI TLHR+S I++ G + G+T RVG+ V G A L+
Sbjct: 61 TKEDLSFVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRP 120
Query: 188 -LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
L++ G SLL +GPP GKTT++R+I R+LA + RV++VDTS+EIGG+G HPGI
Sbjct: 121 YLLESGGSLLVVGPPRTGKTTLLRDIVRILAERWGPRVVVVDTSNEIGGDGLTAHPGIRP 180
Query: 247 ARRMQVPN--SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
ARRMQVP+ S Q +++ +A+ NH P+V+V+DEIG + T ++RG+++VATAHG
Sbjct: 181 ARRMQVPDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHG 240
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+ +++ NP+L ++G E + G ++T +F A+++V+K
Sbjct: 241 ERLLDVLENPALHPVLG---------EPDLKEGRRRTR------PSFGTALQVVAKGRYL 285
Query: 365 VHHSLEATVDAILSGRIP 382
V+ L +D +L GR P
Sbjct: 286 VYPDLAQALDDLLQGREP 303
>gi|291000444|ref|XP_002682789.1| predicted protein [Naegleria gruberi]
gi|284096417|gb|EFC50045.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 163/254 (64%), Gaps = 8/254 (3%)
Query: 79 LLALLPEEMRIRVS--EHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH--IEH 134
L L P++++ ++S ++ LIEV MD GR + S D V I+
Sbjct: 33 FLELFPKKIQEQLSTISGEDVMNLIEVAMDKGRPYELFYYHKKESHIDNSFIVKQEDIDE 92
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
S++ F DNRAGI LHRISA+ NR IIGLT RVGRAV G + + DL++ G S
Sbjct: 93 VVSKL-SFGTDNRAGIDGALHRISAMLNRSEKIIGLTLRVGRAVMGRSKVFSDLIEQGKS 151
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+L +G PG GKTT IR+ A+ L+ +RV++VDTS EIGG GD+PH IG ARRMQV +
Sbjct: 152 ILLLGKPGSGKTTFIRDFAKTLSE--SRRVVVVDTSCEIGGFGDVPHVAIGKARRMQVAD 209
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
Q +V+I+AV+NH P+VIVIDEIGT+ E A TIAQRG+ L +AHG +++++ NP
Sbjct: 210 IRRQQEVMIQAVQNHTPEVIVIDEIGTRDEVSTARTIAQRGVVLCGSAHG-DMKSILKNP 268
Query: 315 SLEMLIGGVQNVTL 328
L L+GGV++V +
Sbjct: 269 ILCDLLGGVESVIM 282
>gi|390337533|ref|XP_785121.2| PREDICTED: uncharacterized protein LOC579939 [Strongylocentrotus
purpuratus]
Length = 1849
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 176/301 (58%), Gaps = 10/301 (3%)
Query: 97 LYELIEVVMDLGRKPLARF--PS--GDF---SLSDCQITVHHIEHA-TSQVGDFAVDNRA 148
L +L EVVMDLGRKP AR+ P G ++ + ++T ++ + D+R+
Sbjct: 1525 LDQLTEVVMDLGRKPSARYYQPGHPGQLKIKTIGENKLTKQDLKDILEGHCSPVSSDHRS 1584
Query: 149 GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTI 208
I TLHR+ + NR+ IGLT AV G A L DL+ G S+LF+G PGVGK+TI
Sbjct: 1585 TIKETLHRVGIMCNRQNEPIGLTTLTKHAVLGCATPLFDLMNQGQSILFVGSPGVGKSTI 1644
Query: 209 IREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
+RE ARV+ + +RV+IVDT +EI G+GD+PHP +G ARR+Q+P+ + Q ++ E V N
Sbjct: 1645 LREAARVINDVVMRRVVIVDTCNEIAGDGDVPHPAVGGARRVQLPDRDSQPNMIREIVRN 1704
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTL 328
H P +VIDE+ T+ +A A +RGIQ+++ A G T++++I+NP L L GG+ N+ +
Sbjct: 1705 HSPHTLVIDEVVTEADAAAVHATRERGIQVISAAPGQTLQDVILNPKLRHLFGGIHNMAM 1764
Query: 329 GDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRIPNVEIRR 388
G T+++R P+ F VE+ + VH ++D L V+ RR
Sbjct: 1765 SHPGQGITG--HTIMQRTQPAAFDILVEMYDRHRWIVHTDFTRSIDLCLQKVQVGVQERR 1822
Query: 389 M 389
+
Sbjct: 1823 V 1823
>gi|297564982|ref|YP_003683954.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296849431|gb|ADH62446.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 322
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 188/319 (58%), Gaps = 25/319 (7%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGD--FSLSDC 125
V++ F E RL+ LP +R+ V H + L E+V+DLG KPL + +GD + L
Sbjct: 16 VHERFPEEFARLMERLPPWVRVEVEGHRD--SLDEIVLDLG-KPLI-YTAGDQVYVLEGR 71
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
+T + + T ++G F +NRAG+ TLHR+S I++ G +G+T RVGR V G A L
Sbjct: 72 TVTKDDLSYLTHRLGGFKENNRAGLEGTLHRVSRIQDAYGETVGVTIRVGRFVLGVAEAL 131
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
+ ++ SLL +GPP GKTT++R+I R+LA Y RV +VDTS+EIGG+G + HPGI
Sbjct: 132 RPWLEQTGSLLVVGPPRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGIS 191
Query: 246 NARRMQVPN--SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
ARR+QVP+ S+ Q V+ +A+ NH P+V+V DEIG + T ++RG+++VATAH
Sbjct: 192 PARRLQVPDPPSKNQGWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAH 251
Query: 304 GVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
G TI +L+ NP L + LGD RR R PS F+ +E+ K +
Sbjct: 252 GETILDLLENPVLLPI--------LGDPGEGRR--------RSRPS-FAMCLEVRGKGKF 294
Query: 364 RVHHSLEATVDAILSGRIP 382
++ +D +L+G P
Sbjct: 295 VLYPDFAEALDTLLTGGEP 313
>gi|218297092|ref|ZP_03497763.1| AAA ATPase [Thermus aquaticus Y51MC23]
gi|218242506|gb|EED09044.1| AAA ATPase [Thermus aquaticus Y51MC23]
Length = 319
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 189/318 (59%), Gaps = 21/318 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
V + F+ E L+ LP +R V H +L E+ MDLG + LA G+ S+ ++
Sbjct: 4 VREGFEQEFAALMQKLPPWVRQEVEGHGP--QLEEIAMDLGAR-LAYTVDGEARYSEREV 60
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
+ ++ +VG F +NRAGI TLHR+S I++ G + G+T RVG+ V G A L+
Sbjct: 61 SKEDLQFVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRP 120
Query: 188 LVQDG-ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
+ DG S+L +GPP GKTT++R++ R+LA + RV++VDTS+EIGG+G IPHPGI
Sbjct: 121 YLLDGQGSILLVGPPRTGKTTLLRDVVRILAERWGSRVLVVDTSNEIGGDGLIPHPGIRP 180
Query: 247 ARRMQVPN--SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
ARRMQVP+ ++ Q +++ +A+ NH P+++V+DEIG + T ++RG+++VATAHG
Sbjct: 181 ARRMQVPDPPAKTQGRIIYQAIANHSPEIVVVDEIGYNEDVYECLTASRRGVRVVATAHG 240
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+ +++ NP+L + LGD + R ER+ +F A+++V K
Sbjct: 241 EKLLDVLENPAL--------HPVLGDPDLKAR-------ERRSRPSFQMALQVVGKGRFV 285
Query: 365 VHHSLEATVDAILSGRIP 382
++ L +D +L G P
Sbjct: 286 LYPDLAKALDELLEGNEP 303
>gi|386361866|ref|YP_006061707.1| hypothetical protein [Thermus thermophilus JL-18]
gi|383510893|gb|AFH40323.1| hypothetical protein TtJL18_2503 [Thermus thermophilus JL-18]
Length = 310
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 185/318 (58%), Gaps = 21/318 (6%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQI 127
+ + FD E L+ LP +R V H E E+ MDLG PLA G S+ +I
Sbjct: 4 LREGFDREFAALMEKLPPWVRKEVEPHGARLE--EIAMDLG-APLAYTVDGAPRFSEREI 60
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T + +VG F +NRAGI TLHR+S I++ G + G+T RVG+ V G A L+
Sbjct: 61 TKEDLSFVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRP 120
Query: 188 -LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
L++ G SLL +GPP GKTT++R+I R+LA + RV++VDTS+EIGG+G HPGI
Sbjct: 121 YLLESGGSLLVVGPPRTGKTTLLRDIVRILAEKWGPRVVVVDTSNEIGGDGLTAHPGIRP 180
Query: 247 ARRMQVPN--SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
ARRMQVP+ S Q +++ +A+ NH P+V+V+DEIG + T ++RG+++VATAHG
Sbjct: 181 ARRMQVPDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHG 240
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+ + + NP+L ++G E R G ++T +F A+++V+K
Sbjct: 241 ERLLDALENPALHPVLG---------EPDLREGRRRTR------PSFGTALQVVAKGRYL 285
Query: 365 VHHSLEATVDAILSGRIP 382
V+ L +D +L GR P
Sbjct: 286 VYPDLAQALDDLLQGREP 303
>gi|291294925|ref|YP_003506323.1| AAA ATPase [Meiothermus ruber DSM 1279]
gi|290469884|gb|ADD27303.1| AAA ATPase [Meiothermus ruber DSM 1279]
Length = 318
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 187/319 (58%), Gaps = 25/319 (7%)
Query: 68 VNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGD--FSLSDC 125
V++ F E RL+ LP +R+ V H + L E+V+DLG KPL + + D + L
Sbjct: 12 VHERFPEEFARLMERLPPWVRVEVEGHRD--SLDEIVLDLG-KPLI-YTAADQVYVLEGR 67
Query: 126 QITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL 185
++ + + T ++G F +NRAG+ TLHRIS I++ G +G+T R+GR V G A L
Sbjct: 68 TVSKDDLSYLTHRLGGFKENNRAGLEGTLHRISRIQDAYGETVGVTIRIGRFVMGVAEAL 127
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
+ ++ SLL +GPP GKTT++R+I R+LA Y RV +VDTS+EIGG+G + HPGI
Sbjct: 128 RPWLEQTGSLLVVGPPRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGIS 187
Query: 246 NARRMQVPN--SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
ARR+QVP+ S+ Q V+ +A+ NH P+V+V DEIG + T ++RG+++VATAH
Sbjct: 188 PARRLQVPDPPSKNQGWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAH 247
Query: 304 GVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
G TI +L+ NP L + LGD +R R PS F+ +E+ K +
Sbjct: 248 GETILDLLENPVLLPI--------LGDPVEGKR--------RSRPS-FAMCLEVRGKGKF 290
Query: 364 RVHHSLEATVDAILSGRIP 382
++ +D +L+G P
Sbjct: 291 VLYPDFAEALDTLLAGGEP 309
>gi|326516068|dbj|BAJ88057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 201 bits (512), Expect = 8e-49, Method: Composition-based stats.
Identities = 95/121 (78%), Positives = 105/121 (86%)
Query: 141 DFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGP 200
DF DNRAGISRTLH ISAI NR+ I+GLTCRVGRAV GSANLLQDLV+ G SLL IGP
Sbjct: 5 DFGGDNRAGISRTLHWISAISNRQADIVGLTCRVGRAVPGSANLLQDLVKAGGSLLLIGP 64
Query: 201 PGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK 260
GV KT +IREIAR+LA+DY KRVMIVDTS+EI G+GDIPHPGIGNARR+QVP+ EMQHK
Sbjct: 65 LGVWKTIVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQVPDQEMQHK 124
Query: 261 V 261
V
Sbjct: 125 V 125
>gi|30692846|ref|NP_849744.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|110737929|dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana]
gi|332193461|gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 303
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 148/212 (69%), Gaps = 9/212 (4%)
Query: 52 SKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP 111
S +S+ DS S + DD LG L +LP+++R R+ +L+EV+MDLGR P
Sbjct: 27 SSVASLALPDS--SSMIVDD---NLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPP 81
Query: 112 LARF---PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAII 168
AR+ P G + L + ++++ +E A VG+F DNRAGI TLHRISAIRNRKG I+
Sbjct: 82 EARYLGEPGGQY-LRNNEVSMEELEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIV 140
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
GLTCRVGRAVSG ++L DL+ G S+LF+G PGVGKTT++REIARVL+++++KRV+I+D
Sbjct: 141 GLTCRVGRAVSGHIDMLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIID 200
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK 260
TS+EIGG+GDIPH IG + + + E + +
Sbjct: 201 TSNEIGGDGDIPHSAIGGIETVTLGDEEARAR 232
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 320 IGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSG 379
IGG++ VTLGDEEA R QK++LERK P TF +E+ + + + H E +VD +L G
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRER-DYWIAHQTEKSVDMLLRG 274
Query: 380 RIPNVEIRR 388
R P VE+RR
Sbjct: 275 RNPMVEVRR 283
>gi|397568725|gb|EJK46301.1| hypothetical protein THAOC_35034 [Thalassiosira oceanica]
Length = 710
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 190/344 (55%), Gaps = 39/344 (11%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLS-DCQITVHH--IEHA 135
LL +LP E + E L + +V +D+GR+P + LS D + V H ++
Sbjct: 355 LLDILPAEWGESL-EEIGLDGISDVSLDIGRRPYCWHSKRRYYLSSDTEYLVEHDDLKEI 413
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
+ +F DNRAG+ LHRISAIR+ + IIGLT RVGR V G+A L++DL+ D S+
Sbjct: 414 ILNLQEFGDDNRAGLDGQLHRISAIRDNQELIIGLTIRVGRHVEGNAALIRDLLADDRSI 473
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMI-----------------------VDTSSE 232
L +G PG GKTTI+R+IA+ L++ + V I VDTS+E
Sbjct: 474 LLLGEPGSGKTTIVRDIAKELSD--RANVFIGKWSTFPCLFGGSSLTSNPPHAAVDTSNE 531
Query: 233 IGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIA 292
I G+G +PHP +G +RRM VP+ Q V++E ++NH P+V+VIDEIG E AA T
Sbjct: 532 IAGDGGVPHPCVGMSRRMMVPSLRDQASVMVECLQNHTPEVMVIDEIGRGREVEAAQTSK 591
Query: 293 QRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRG-------VQKTVLER 345
RG++++A+AHG + +L+ N L LIGG+ T+GD EA R +QK V +R
Sbjct: 592 NRGVRMIASAHG-DLRSLMKNRELRGLIGGLATTTVGDMEARRMQKKTGGEILQKQVTQR 650
Query: 346 KGPSTFSCAVEIVSK--TELRVHHSLEATVDAILSGRIPNVEIR 387
F +E+ E + + VDA+L G+ +V+ R
Sbjct: 651 AAAPIFETIIELRRGRLNEWHIIPDVATAVDAVLKGKTYDVQKR 694
>gi|390337535|ref|XP_784840.3| PREDICTED: uncharacterized protein ycf45-like [Strongylocentrotus
purpuratus]
Length = 441
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 173/301 (57%), Gaps = 17/301 (5%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFS-------LSDCQITVHHIEHATSQVGDFAVDNRAGIS 151
+L EVV+D+GRKP AR+ S L+ ++T ++ G N G+
Sbjct: 118 QLAEVVLDVGRKPRARYLKSGLSSEMMEKVLNRDEVTKQDLKGILEDSGFARTSNSQGMV 177
Query: 152 R-TLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIR 210
R TLHR+ + N +G +IG+T +V + G + L D+ G S+L +GP GVGKTT++R
Sbjct: 178 RDTLHRLGLLANIQGEVIGITAKVEHPLPGCLSPLYDIFNKGKSILVVGPTGVGKTTLLR 237
Query: 211 EIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHM 270
E ARVL++ KK VMI+DT SEI G GDIPH IG+ARR+QV S +QHKV+ E +NH
Sbjct: 238 EAARVLSDVEKKNVMIIDTLSEIAGEGDIPHQSIGSARRLQVIESNLQHKVMSEVYQNHR 297
Query: 271 PQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGD 330
P++++IDEI + EA + RGIQL+A G T+ ++++N +L + GG++ +
Sbjct: 298 PEIVIIDEISSLEEAEKTLDMKLRGIQLIAGVQGKTLADVLLNTALTPITGGIK-----E 352
Query: 331 EEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSG--RIPNVEIRR 388
+ GV + R GP F VE++ +H + +DA+L G R VE R+
Sbjct: 353 SVGYPGGVPGRL--RTGPVVFDVLVEMLDMERWIIHWDFQWAIDAVLPGGRRTLEVEERK 410
Query: 389 M 389
+
Sbjct: 411 V 411
>gi|340054200|emb|CCC48495.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 537
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 174/307 (56%), Gaps = 7/307 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYE--LIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
E+ LL+LL +R ++ HP E + E + LG+ R G++ L T +
Sbjct: 134 EVKHLLSLLAPPLRAAITSHPIFVEQEVEEFFIHLGQAVEVR--GGEWVLQTPPPTATEL 191
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+H +V F D R I T HR+S R R G +G+T RVGR V A L L G
Sbjct: 192 QHTLKRVSHFGDDGRGCIKNTPHRVSLWRGRCGEPLGVTIRVGRFVPNVAQALLPLANQG 251
Query: 193 ASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
SLL + GVGKTT++R+IA L+ + RV++VDTS+EIGG+ +P P +G RR+Q
Sbjct: 252 -SLLIVSKAGVGKTTLLRDIATSLSRKPCRPRVVVVDTSNEIGGDSPVPLPFLGRCRRIQ 310
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP E Q ++ + ++NH P+ +V+DEI T EA AA +I+QRG+ L+AT HG ++ ++
Sbjct: 311 VPRREDQGDLMKQVLQNHSPEYVVVDEISTAAEAEAAWSISQRGVCLIATCHGESLAGVL 370
Query: 312 MNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
N +L +L+GG L +EE R ++KTVLER PS F E+ S+ V+ +
Sbjct: 371 QNQTLNLLVGGTAQAFLSNEERRLRNKLKKTVLERPYPSPFKFVAELNSRNTAHVYVDVN 430
Query: 371 ATVDAIL 377
VD +L
Sbjct: 431 QAVDCLL 437
>gi|154341757|ref|XP_001566830.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064155|emb|CAM40352.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 551
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 177/303 (58%), Gaps = 6/303 (1%)
Query: 79 LLALLPEEMRIRVSEHP--ELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHAT 136
L++ L +R +++HP + ++ E+ + LG+ R SG + + T +++
Sbjct: 119 LMSFLFPALRTAITQHPSFDYTQVEELFVHLGQDVEVRG-SGGWVIQLPPPTTAELQYLM 177
Query: 137 SQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL 196
+G F D R ++ T HR S R R G +G+T RVGR V G+A L L + G SLL
Sbjct: 178 KHIGRFGADGRGCVANTAHRASVWRGRHGEALGVTLRVGRYVPGAARALLPLARRG-SLL 236
Query: 197 FIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
+ G+GKTT++R++A LA D RV +VDTS+EIGG+G IP P +G RR+QVP
Sbjct: 237 ILSKAGMGKTTLLRDLAAGLAQDPLTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVPRR 296
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
E Q +V+IE ++NH P +++DEI T+ EA AA +I+QRG+ ++ T HG +E L+ N +
Sbjct: 297 EDQSRVMIEVIQNHTPDYLIVDEIATEEEAEAAWSISQRGVHMIGTCHGEHLEGLLQNRA 356
Query: 316 LEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD 374
L +L+GG L +EE R +KTVLER S FS VE+ ++ ++ + VD
Sbjct: 357 LNLLVGGAAQAFLSNEERRLRNKTKKTVLERPYNSPFSFVVELHARNRAHLYVDVNKAVD 416
Query: 375 AIL 377
L
Sbjct: 417 LAL 419
>gi|298705543|emb|CBJ28810.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 160/268 (59%), Gaps = 27/268 (10%)
Query: 140 GDFAVDNRAGISRTLHRISAIRNRKGA-IIGLTCRVGRAVSGSANLLQDLV--------- 189
G FA DNRAG+ LHRIS +R R+G I G+T R+GR GSA L+ DL+
Sbjct: 10 GKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDK 69
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPH-PGIGNA 247
+ AS+L +G PG GKTT++R+I R ++ + + V+IVDTS+EI G+G IPH IG +
Sbjct: 70 PERAASVLVLGKPGCGKTTVLRDICRKISQE--QTVVIVDTSNEIAGDGHIPHLAAIGQS 127
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
RRM VP+ QH V+ EA++NH PQ IV+DE+ K EA A I RG+++VA+AHG +
Sbjct: 128 RRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHG-DL 186
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEA-HRRGVQKTVLERKGPSTFSCAVEIVSK--TELR 364
++L+ NP L L+GG +VTLGD A K +R G F VE+ +
Sbjct: 187 QSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWT 246
Query: 365 VHHSLEATVDAILSG---------RIPN 383
+ +++ VDAILSG RIPN
Sbjct: 247 IVWNVDLAVDAILSGKPYKVSQRTRIPN 274
>gi|348667950|gb|EGZ07775.1| hypothetical protein PHYSODRAFT_529219 [Phytophthora sojae]
Length = 397
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 190/345 (55%), Gaps = 22/345 (6%)
Query: 71 DFDIELGRLLALLPEEMR---IRVSEHPELYELIEVVMDLGRKPLARFPSGD---FSLSD 124
+ ELG +L LLP + R + + ++ L+++ +D+GR P S
Sbjct: 55 ELQCELGPMLDLLPADYRDAILAIDDYKN--RLVDICLDVGRVPYVYTGKKQRVVLSKHG 112
Query: 125 CQITVHHIEHATSQVGD---FAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
+ I+ S +G DNRAGI R LHRIS +R++ + GLT RVGRA+ +
Sbjct: 113 ATVAKDTIDEILSNLGGEMRIGDDNRAGIDRQLHRISVMRSKTDEVYGLTMRVGRALRNA 172
Query: 182 ANLLQDLVQDG----ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
A +L DL+ S+L +G G GKTT+IR++AR ++ + + V I+DTS+EIGG+G
Sbjct: 173 ACVLTDLLLSARHADKSVLVLGHSGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDG 231
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
+PH +G ARRM V + E Q V++E V+NH + +++DEIG + E +AAST+ QRG +
Sbjct: 232 LVPHECVGWARRMMVRSLEAQAGVMVECVQNHTVETLIVDEIGRRAEVLAASTVRQRGPR 291
Query: 298 LVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTV-LERKGPSTFSCAVE 356
L+A+AHG L+ NP L+ L+GG Q V +GD A + + + +R G F VE
Sbjct: 292 LIASAHG-DFRALLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKLQTQRAGNPIFDVIVE 350
Query: 357 I--VSKTELRVHHSLEATVDAILSGRIPNVEIRRMQHDGSKETVE 399
+ V + RV + VD++ G E R Q D + V+
Sbjct: 351 LDHVVRGRCRVIWDVAKAVDSVFEGNGYAFETR--QWDATTRGVQ 393
>gi|342181564|emb|CCC91044.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 539
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 176/307 (57%), Gaps = 7/307 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
E+ LL++L +R ++ +P E+ E LG+ R GD+ + TV +
Sbjct: 132 EVKHLLSMLSPSVRTFLTSNPIFNDMEVEEFFFHLGQDIEVR--GGDWVIQAPPPTVGDL 189
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+ +VG F D R I T HR++ R R G +GLT RVGR V A + L + G
Sbjct: 190 RYTLERVGRFGEDGRGCIRNTSHRVAVWRGRHGEPLGLTIRVGRYVPNLARAIVPLARRG 249
Query: 193 ASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
S+L + GVGKTTI+R++A L+ + + RVM++DTS+EIGG+ + P +G RR+Q
Sbjct: 250 -SVLIVSKAGVGKTTILRDLAASLSREPSRPRVMVIDTSNEIGGDSPVALPFLGRCRRVQ 308
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP E Q +V+ + ++NH P+ +++DEI + EA AA +I+QRG+ L+AT HG + L+
Sbjct: 309 VPRREAQQEVMRQVLQNHSPEYMIVDEITSAAEAEAAWSISQRGVHLIATCHGENLAGLL 368
Query: 312 MNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
N SL +L+GGV L +EE R V+KTVLER S F VE+ S+ ++ +
Sbjct: 369 QNRSLNILVGGVAQAFLSNEERRLRNKVKKTVLERPNSSPFHFVVELTSRKCAHLYVDVN 428
Query: 371 ATVDAIL 377
VD +L
Sbjct: 429 EAVDCLL 435
>gi|398019514|ref|XP_003862921.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501152|emb|CBZ36230.1| hypothetical protein, conserved [Leishmania donovani]
Length = 551
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 201/356 (56%), Gaps = 15/356 (4%)
Query: 35 RSSPNSTFFIEEFSGFRSKFSSVLFSD-SRVSYSVNDDFD--------IELGRLLALLPE 85
R+ ++T F +S ++S L +D +R + D+ E L++LLP
Sbjct: 66 RAVWSATTFRSAWSKLHKAYASFLETDPARAAELRAKDWQGLALYNAYAETLHLMSLLPA 125
Query: 86 EMRIRVSEHP--ELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
+R +++HP + E+ E+ + LG+ R SG + + T +++ +G F
Sbjct: 126 TLRTAITQHPSFDYTEVEELFVHLGQDVEVRG-SGGWVIQLPPPTTADLQYLVKHIGRFG 184
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
D R ++ T HR SA R R G +G+T RVGR V G+A L L Q G SLL + G+
Sbjct: 185 ADGRGCVANTAHRASAWRGRFGEALGVTLRVGRYVPGAARALLPLAQRG-SLLILSKAGM 243
Query: 204 GKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVL 262
GKTT++R++A LA + RV +VDTS+EIGG+G IP P +G RR+QV E Q +V+
Sbjct: 244 GKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQGRVM 303
Query: 263 IEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
+E ++NH P+ +++DEI T+ EA AA +I+QRG+ L+ T HG +E L+ N +L +L+GG
Sbjct: 304 MEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNLLVGG 363
Query: 323 VQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L +EE R +KTVLER S FS VE+ ++ ++ + VD +L
Sbjct: 364 AAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYVDVNKAVDLVL 419
>gi|339898849|ref|XP_001467056.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398540|emb|CAM70107.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 551
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 201/356 (56%), Gaps = 15/356 (4%)
Query: 35 RSSPNSTFFIEEFSGFRSKFSSVLFSD-SRVSYSVNDDFD--------IELGRLLALLPE 85
R+ ++T F +S ++S L +D +R + D+ E L++LLP
Sbjct: 66 RAVWSATTFRSAWSKLHKAYASFLETDPARAAELRAKDWQGLALYNAYAETLHLMSLLPA 125
Query: 86 EMRIRVSEHP--ELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
+R +++HP + E+ E+ + LG+ R SG + + T +++ +G F
Sbjct: 126 TLRTAITQHPSFDYTEVEELFVHLGQDVEVRG-SGGWVIQLPPPTTADLQYLVKHIGRFG 184
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
D R ++ T HR SA R R G +G+T RVGR V G+A L L Q G SLL + G+
Sbjct: 185 ADGRGCVANTAHRASAWRGRFGEALGVTLRVGRYVPGAARALLPLAQRG-SLLILSKAGM 243
Query: 204 GKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVL 262
GKTT++R++A LA + RV +VDTS+EIGG+G IP P +G RR+QV E Q +V+
Sbjct: 244 GKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQGRVM 303
Query: 263 IEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
+E ++NH P+ +++DEI T+ EA AA +I+QRG+ L+ T HG +E L+ N +L +L+GG
Sbjct: 304 MEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNLLVGG 363
Query: 323 VQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L +EE R +KTVLER S FS VE+ ++ ++ + VD +L
Sbjct: 364 AAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYVDVNKAVDLVL 419
>gi|348667954|gb|EGZ07779.1| hypothetical protein PHYSODRAFT_529044 [Phytophthora sojae]
Length = 460
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 177/314 (56%), Gaps = 17/314 (5%)
Query: 99 ELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHATSQVGD---FAVDNRAGISR 152
+L++V +D+GR P S + I+ S +G DNRAGI R
Sbjct: 146 KLVDVCLDVGRVPYVYTGKKQRVVLSKHGATVAKDTIDEILSNLGGEMRIGDDNRAGIDR 205
Query: 153 TLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG----ASLLFIGPPGVGKTTI 208
LHRIS +R++ + GLT RVGRA+ +A +L DL+ S+L +G PG GKTT+
Sbjct: 206 QLHRISVMRSKTDEVYGLTMRVGRALRNAACVLTDLLLSARHADKSVLVLGHPGSGKTTL 265
Query: 209 IREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
IR++AR ++ + + V I+DTS+EIGG+G +PH +G ARRM V + E Q V++E V+N
Sbjct: 266 IRDVARCVS-ETMENVCIIDTSNEIGGDGLVPHECVGWARRMMVRSLEAQAGVMVECVQN 324
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTL 328
H + +++DEIG + E +AAST+ QRG +L+A+AHG L+ NP L+ L+GG Q V +
Sbjct: 325 HTVETLIVDEIGRRAEVLAASTVRQRGPRLIASAHG-DFRALLKNPDLKGLVGGSQQVIV 383
Query: 329 GDEEAHRRGVQKTV-LERKGPSTFSCAVEI--VSKTELRVHHSLEATVDAILSGRIPNVE 385
GD A + + + +R G F VE+ V + RV + VD++ G E
Sbjct: 384 GDSAAAQSASKSKLQTQRAGNPIFDVIVELDHVVRGRCRVIWDVAKAVDSVFEGNGYAFE 443
Query: 386 IRRMQHDGSKETVE 399
R Q D + V+
Sbjct: 444 TR--QWDATTRGVQ 455
>gi|320450693|ref|YP_004202789.1| AAA ATPase [Thermus scotoductus SA-01]
gi|320150862|gb|ADW22240.1| AAA ATPase [Thermus scotoductus SA-01]
Length = 316
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 171/311 (54%), Gaps = 19/311 (6%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
L RLL+ P +R ++E E E EV MDL R PL G+ L +++ IE+
Sbjct: 19 LERLLSYFPAWIRSLITEDVEGTE--EVAMDLDR-PLVIRRRGEQYLY-REVSAADIEYF 74
Query: 136 TSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL 195
++VG F + RAGI TLHRIS IR+ IG T R GRA+ G A LQ + S+
Sbjct: 75 YNKVGSFRPNGRAGIPGTLHRISVIRDSDDLAIGFTIRFGRAIPGIAKPLQKWISGRDSV 134
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
L IGPPGVGKTT++R I A K R++IVDTS+EI G+G +PHP IG+ARRM V +
Sbjct: 135 LIIGPPGVGKTTLLRGIVEEKAKVLKARLVIVDTSNEIAGDGTVPHPIIGSARRMMVGDP 194
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
Q ++++A+ NH P+ IV+DEIG + T +RG+ +VAT HG + +++ NP
Sbjct: 195 RKQASIIMQAITNHSPETIVVDEIGYHDDVAVLETARRRGVDIVATVHGEDLIDVLENPV 254
Query: 316 LEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDA 375
L+ L+G D E RR L R +F + +++K +V+ +D
Sbjct: 255 LKPLLG------YPDLEHGRR------LTR---PSFRIGIAVLAKGVYKVYPDFTLAIDQ 299
Query: 376 ILSGRIPNVEI 386
L P E+
Sbjct: 300 ALRREDPEGEV 310
>gi|401425735|ref|XP_003877352.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493597|emb|CBZ28886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 550
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 227/431 (52%), Gaps = 35/431 (8%)
Query: 35 RSSPNSTFFIEEFSGFRSKFSSVLFSD-SRVSYSVNDDFD--------IELGRLLALLPE 85
R+ ++T F ++ ++S L +D +R + D+ E L++LLP
Sbjct: 66 RAVWSATTFRSAWNKLHKAYASFLETDPARAAELRAKDWQGLALYSAYAETLHLMSLLPA 125
Query: 86 EMRIRVSEHP--ELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
+R +++HP + ++ E+ + LG+ R SG + + T +E+ +G F
Sbjct: 126 TLRTAITQHPSFDYTDVEELFVHLGQDVEVRG-SGGWVIQLQPPTTADLEYLVKHIGRFG 184
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
D R ++ T HR S R R G +G+T RVGR V G+A L L Q G SLL + G+
Sbjct: 185 ADGRGCVANTAHRASVWRGRHGEALGVTLRVGRYVPGAARALLPLAQRG-SLLILSKAGM 243
Query: 204 GKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVL 262
GKTT++R++A LA + RV +VDTS+EIGG+G IP P +G RR+QV E Q +V+
Sbjct: 244 GKTTLLRDLAAALAQEPGAPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQGRVM 303
Query: 263 IEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
+E ++NH P+ +++DEI T+ EA AA +I+QRG+ L+ T HG +E L+ N +L +L+GG
Sbjct: 304 MEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNLLVGG 363
Query: 323 VQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSGRI 381
L +EE R +KTVLER S FS VE+ ++ ++ + VD +L
Sbjct: 364 AAQAFLSNEERRLRNKTRKTVLERPYSSPFSFVVELHGRSRGHLYVDVNKAVDLVLD--- 420
Query: 382 PNVEIRRMQHDGSKETVEKEFFAETSSDEEDEMM---VEDAMEVTEERTGKIQFISEFPP 438
E K A ++ E ++ VE + + +ER K+++++
Sbjct: 421 --------------EQPAKLNAAVGAAVELSALLPRRVEKLLRLQDERKRKLKYVAGTET 466
Query: 439 NIGEDCWEDGL 449
N E EDG+
Sbjct: 467 NDAEVGEEDGM 477
>gi|428178844|gb|EKX47717.1| hypothetical protein GUITHDRAFT_69358 [Guillardia theta CCMP2712]
Length = 353
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 170/321 (52%), Gaps = 28/321 (8%)
Query: 83 LPEEMRIRVSEH--PELYELIEVVMDLGRKPLARF-----------PSGDFSLSDCQITV 129
LP +R R+ E +L +L E+ + LGR P A F P + I +
Sbjct: 3 LPAPVRARLQEQFSDKLRDLNEIYLQLGRWPEAVFANPHTGQLYREPLAQVNCEQSDIAL 62
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGA------IIGLTCRVGRAVSGSAN 183
+ + G R GI TLHR+S I + + + +IG+T RVG+ V G+ +
Sbjct: 63 FAEMFSKTHTGSLLATRRIGIDGTLHRLSVILSHRTSSEGVPSVIGVTARVGKTVEGTLD 122
Query: 184 -LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP 242
L DL+Q S+L IG P GKTT +RE AR L+ D + V++VD + EIGG+G +PHP
Sbjct: 123 SLAPDLLQSTGSVLLIGRPNSGKTTCLREFARRLSEDKNQIVVVVDKTCEIGGDGIVPHP 182
Query: 243 GIGNARRMQVPNSE-------MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
IGNAR + V + +QH+ + EAVEN P V+++DEI + E A T++QRG
Sbjct: 183 AIGNARWLPVETLKKDGQMFNLQHERMREAVENQSPHVVIVDEISSATEVEAIRTMSQRG 242
Query: 296 IQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRG-VQKTVLERKGPSTFSCA 354
I+++A HG T+ L+ +P L GG V L EEA++R QK+VL R F A
Sbjct: 243 IRIIAAVHGGTLPMLLHDPDRAALTGGCHTVLLSGEEANKRKDKQKSVLMRMHEPMFQMA 302
Query: 355 VEIVSKTELRVHHSLEATVDA 375
VE+ + +H ++ VD
Sbjct: 303 VEMHERNRWILHRNVRHAVDC 323
>gi|357168544|ref|XP_003581698.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ycf45-like
[Brachypodium distachyon]
Length = 157
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 111/146 (76%)
Query: 212 IARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ARV+A++++KR +IVDTS+EIGG+GDIPH IG ARRMQVP MQH+V+IE VENHMP
Sbjct: 1 MARVVADEFQKRQVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQHRVMIEVVENHMP 60
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
+V+++DEI T+ EA A +I +RG+ L+ TAHG + N+I NP L LIGGV+ VTLGDE
Sbjct: 61 EVVIVDEIXTETEAQACRSIVERGVMLIGTAHGERLANIIKNPVLSDLIGGVKTVTLGDE 120
Query: 332 EAHRRGVQKTVLERKGPSTFSCAVEI 357
EA R +++LERK P F VE+
Sbjct: 121 EARARHTLRSILERKAPPAFPFLVEL 146
>gi|297567949|ref|YP_003686919.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296852398|gb|ADH65411.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 386
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 167/322 (51%), Gaps = 31/322 (9%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP--LARFP---SGDFSLSDCQITV 129
+L R+L +LP+ + + E E+ +D+GR P P +G S+ +
Sbjct: 6 QLERILEVLPDWIAAEARTVKDSLE--EIALDIGRIPHYWCGAPPPLAGSQPFSEADLAN 63
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+ ++ F D R GI TLHRISAI++R ++ GLT R+ R V G A+ + +
Sbjct: 64 IQAKLSSRYQVSFREDGRVGIGGTLHRISAIKDRYKSLAGLTIRLARVVEGVADPVMPYL 123
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+L IGPPGVGKTT +R++ R A +V++VDTS+EIGG G +PHP +G+ARR
Sbjct: 124 LQADGVLIIGPPGVGKTTFLRDVVRQYAQQIGPKVVVVDTSNEIGGEGLVPHPTLGSARR 183
Query: 250 MQVPNSE---------MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
+QVP M + +EA+ NH PQVIV DE+G + TI +RGI+ +
Sbjct: 184 LQVPTPNYAIGETFQMMLARTYLEALANHGPQVIVGDEVGYPEDVAVVETIGKRGIKGIV 243
Query: 301 TAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSK 360
T HG T+ +++ NP L LIG D A R R+G FS A+E+ K
Sbjct: 244 TVHGRTLRDVLENPVLWPLIG------RPDLPARR---------RQGRPVFSMALEVRGK 288
Query: 361 TELRVHHSLEATVDAILSGRIP 382
V+ L +D +L G P
Sbjct: 289 GRFAVYPDLAGAIDTLLQGGQP 310
>gi|159481614|ref|XP_001698873.1| hypothetical protein CHLREDRAFT_151995 [Chlamydomonas reinhardtii]
gi|158273365|gb|EDO99155.1| predicted protein [Chlamydomonas reinhardtii]
Length = 715
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ L G SLL +G PG GKTT++R+IAR+LA+D +RV++VDTS+EI G+ PHP I
Sbjct: 419 LQPLEAAG-SLLLVGRPGSGKTTVLRDIARLLADDLDRRVVVVDTSNEIAGDDPTPHPCI 477
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G+ARRM VP E+ +V++EAV+NH P+V+V+DEI ++ E +AA +IAQRG+ LVAT HG
Sbjct: 478 GSARRMMVPRRELLWRVMLEAVQNHGPEVLVVDEISSEEEVLAAQSIAQRGVMLVATTHG 537
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV-QKTVLERKGPSTFSCAVEIVSKTEL 363
+++ L+ N +L L+GG++ VT+GD A KT LERK TF+ VE+ L
Sbjct: 538 PSLKALLRNHTLNPLLGGIEVVTIGDVAARESNSGNKTRLERKDMPTFAAVVEVKPGGRL 597
Query: 364 RVHHSLEATVDAIL 377
VH +VD +L
Sbjct: 598 LVHPDTAESVDLLL 611
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 142 FAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSG 180
F DNR + +LHRISA+R+ G I GLT RVGR G
Sbjct: 324 FGTDNRCCVPGSLHRISAMRDTAGRIYGLTYRVGRHTHG 362
>gi|72390323|ref|XP_845456.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359508|gb|AAX79944.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801991|gb|AAZ11897.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 470
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 7/307 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
E+ LL+LL +R + P E+ E + LG+ R D+ + +V +
Sbjct: 70 EVKHLLSLLTPSLRSHIVSQPSYKQTEVEEFFLHLGQDIEVR--GADWVIQVPPPSVTDL 127
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+ +VG F D R I T HR++ R R G +GLT RVGR V A L L + G
Sbjct: 128 RYTLERVGRFGDDGRGCIGHTPHRVAVWRGRLGEPLGLTIRVGRYVPNVARALVPLARRG 187
Query: 193 ASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
S+L + G+GKTTI+R++A L+ D K RVM+VDTS+EIGG+ +P P +G RR+Q
Sbjct: 188 -SVLILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQ 246
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP E Q +V+ + ++NH P+ +++DE+ T EA +I+QRG+ LVAT HG ++ L+
Sbjct: 247 VPRREEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLL 306
Query: 312 MNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
N SL +L+GG + L +EE R ++KT+LER S F VE+ S+ ++ +
Sbjct: 307 QNQSLNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYVDVN 366
Query: 371 ATVDAIL 377
VD +L
Sbjct: 367 QAVDCLL 373
>gi|261328858|emb|CBH11836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 531
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 7/307 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
E+ LL+LL +R + P E+ E + LG+ R D+ + +V +
Sbjct: 131 EVKHLLSLLTPSLRSHIVSQPSYKQTEVEEFFLHLGQDIEVR--GADWVIQVPPPSVTDL 188
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+ +VG F D R I T HR++ R R G +GLT RVGR V A L L + G
Sbjct: 189 RYTLERVGRFGDDGRGCIGHTPHRVAVWRGRLGEPLGLTIRVGRYVPNVARALVPLARRG 248
Query: 193 ASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
S+L + G+GKTTI+R++A L+ D K RVM+VDTS+EIGG+ +P P +G RR+Q
Sbjct: 249 -SVLILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQ 307
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
VP E Q +V+ + ++NH P+ +++DE+ T EA +I+QRG+ LVAT HG ++ L+
Sbjct: 308 VPRREEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLL 367
Query: 312 MNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
N SL +L+GG + L +EE R ++KT+LER S F VE+ S+ ++ +
Sbjct: 368 QNQSLNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYVDVN 427
Query: 371 ATVDAIL 377
VD +L
Sbjct: 428 QAVDCLL 434
>gi|157872545|ref|XP_001684813.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127883|emb|CAJ06408.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 551
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 199/356 (55%), Gaps = 15/356 (4%)
Query: 35 RSSPNSTFFIEEFSGFRSKFSSVLFSD-SRVSYSVNDDFD--------IELGRLLALLPE 85
R+ ++T F ++ ++S L +D R + D+ E L++LLP
Sbjct: 66 RAVWSATTFRSAWNKLHKAYASFLETDPERAAELRAKDWQGLALYNSYAETLHLMSLLPA 125
Query: 86 EMRIRVSEHP--ELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFA 143
+R +++H + E+ E+ + LG+ R SG + + T +++ +G F
Sbjct: 126 TLRTAITQHSSFDYTEVEELFVHLGQDVEVRG-SGGWVIQLPPPTTADLQYLVKHIGRFG 184
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGV 203
D R ++ T HR S R R G +G+T RVGR V G+A L L Q G SLL + G+
Sbjct: 185 ADGRGCVANTAHRASVWRGRHGEALGVTLRVGRYVPGAARALLPLAQRG-SLLILSKAGM 243
Query: 204 GKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVL 262
GKTT++R++A LA + RV +VDTS+EIGG+G IP P +G RR+QV + Q +V+
Sbjct: 244 GKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVAQRQDQGRVM 303
Query: 263 IEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
+E ++NH P+ +++DEI T+ EA AA +I+QRG+ L+ T HG +E L+ N +L +L+GG
Sbjct: 304 MEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNLLVGG 363
Query: 323 VQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAIL 377
L +EE R ++KTVLER S FS VE+ ++ ++ + VD +L
Sbjct: 364 AAQAFLSNEERRLRNKMKKTVLERPYSSPFSFVVELHARNLGHLYVDVNKAVDLVL 419
>gi|71422331|ref|XP_812102.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876843|gb|EAN90251.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 176/308 (57%), Gaps = 9/308 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQI-TVHH 131
E+ LL++LP +R + HP ++ E + LG++ R GD ++ +V
Sbjct: 131 EVKHLLSILPPSLREAIISHPSFSHADVEEFFVHLGQEMEVR---GDGWVAQLPPPSVSE 187
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
++ + ++G F D R I T HR+S R R G +G+T RVGR V A L L
Sbjct: 188 LQFSIEKIGHFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIPLAHK 247
Query: 192 GASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
G S+L + G+GKTT++R++A L+ + K RV++VDTS+EIGG+ IP P +G RR+
Sbjct: 248 G-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRV 306
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QV E Q +++ + ++NH P+ +V+DEI T EA AA ++ QRG+ L+AT HG + L
Sbjct: 307 QVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGL 366
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
+ N SL +L+GG L +EE R +KT+LER S F VE+ S+ + V+ +
Sbjct: 367 LQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDV 426
Query: 370 EATVDAIL 377
VD +L
Sbjct: 427 NTAVDLLL 434
>gi|407852006|gb|EKG05683.1| hypothetical protein TCSYLVIO_003242 [Trypanosoma cruzi]
Length = 539
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 175/307 (57%), Gaps = 7/307 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI 132
E+ LL++L +R + HP ++ E + LG++ R G++ +V +
Sbjct: 131 EVKHLLSILAPSLREAIISHPSFSHADVEEFFLHLGQEMEVR--GGEWVAQLPPPSVSEL 188
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG 192
+ + ++G F D R I T HR+S R R G +G+T RVGR V A L L G
Sbjct: 189 QFSIEKIGQFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIPLAHKG 248
Query: 193 ASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
S+L + G+GKTT++R++A L+ + K RV++VDTS+EIGG+ IP P +G RR+Q
Sbjct: 249 -SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQ 307
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
V E Q +++ + ++NH P+ +V+DEI T EA AA ++ QRG+ L+AT HG + L+
Sbjct: 308 VSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLL 367
Query: 312 MNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
N SL +L+GG + L +EE R +KT+LER S F VE+ S+ + V+ +
Sbjct: 368 QNQSLNLLVGGAAHAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVN 427
Query: 371 ATVDAIL 377
VD +L
Sbjct: 428 TAVDLLL 434
>gi|159466496|ref|XP_001691445.1| hypothetical protein CHLREDRAFT_145023 [Chlamydomonas reinhardtii]
gi|158279417|gb|EDP05178.1| predicted protein [Chlamydomonas reinhardtii]
Length = 415
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
SLL +G PG GKTT++R+IAR LA+D V++VDTS+EI G +PH IG+ARR++V
Sbjct: 209 SLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDAVPHSCIGSARRLKVG 268
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ V++EAV+NH PQV+V+DE+G++ EA AA +I+QRG+ LVATAHG + +++ N
Sbjct: 269 RRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGN 328
Query: 314 PSLEMLIGGVQNVTL-GDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEAT 372
P L L+GG+Q V L +G KT ER+G TF C VE+ LR+ + A+
Sbjct: 329 PDLNSLVGGMQTVILGDAAAGAAQGGAKTRTERRGEPTFRCLVEVHGAGVLRLRPDVAAS 388
Query: 373 VDAILS 378
VDA+L
Sbjct: 389 VDALLG 394
>gi|71420679|ref|XP_811568.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876244|gb|EAN89717.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 175/308 (56%), Gaps = 9/308 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPEL--YELIEVVMDLGRKPLARFPSGDFSLSDCQI-TVHH 131
E+ LL++L +R V HP ++ E + LG++ R GD ++ +V
Sbjct: 131 EVKHLLSILAPSLREAVISHPSFSHADVEEFFVHLGQEMEVR---GDEWVAQLPPPSVSE 187
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
++ + ++G F D R I T HR+S R R G +G+T RVGR V A L L
Sbjct: 188 LQFSIEKIGHFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIPLAHK 247
Query: 192 GASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
G S+L + G+GKTT++R++A L+ + K RV++VDTS+EIGG+ IP P +G RR+
Sbjct: 248 G-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRV 306
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QV E Q +++ + ++NH P+ +V+DEI T EA AA ++ QRG+ L+AT HG + L
Sbjct: 307 QVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGL 366
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
+ N SL +L+GG L +EE R +KT+LER S F VE+ S+ + V+ +
Sbjct: 367 LQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDV 426
Query: 370 EATVDAIL 377
VD +L
Sbjct: 427 NTAVDLLL 434
>gi|407416930|gb|EKF37845.1| hypothetical protein MOQ_001953 [Trypanosoma cruzi marinkellei]
Length = 539
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 176/308 (57%), Gaps = 9/308 (2%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELY--ELIEVVMDLGRKPLARFPSGDFSLSDCQI-TVHH 131
E+ LL++L +R + HP ++ E + LG++ R GD ++ +V+
Sbjct: 131 EVKHLLSILAPSLREAIISHPFFSHEDVEEFFVHLGQEIEVR---GDGWVAQLPPPSVNE 187
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
++ + ++G F D R I T HR+S R R G +G+T RVGR V A L L
Sbjct: 188 LQFSIEKIGRFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIPLAHK 247
Query: 192 GASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARRM 250
G S+L + G+GKTT++R++A L+ + K RV++VDTS+EIGG+ IP P +G RR+
Sbjct: 248 G-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRV 306
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
QV E Q +++ + ++NH P+ +V+DEI T EA AA ++ QRG+ L+AT HG + L
Sbjct: 307 QVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGL 366
Query: 311 IMNPSLEMLIGGVQNVTLGDEEAH-RRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSL 369
+ N SL +L+GG L +EE R +KT+LER S F VE+ S+ + V+ +
Sbjct: 367 LQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDV 426
Query: 370 EATVDAIL 377
VD +L
Sbjct: 427 NTAVDLLL 434
>gi|414865049|tpg|DAA43606.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 209
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 124/196 (63%), Gaps = 4/196 (2%)
Query: 31 FPYLRSSPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIR 90
P + SP F + G + + + V + +L LL +LP ++R
Sbjct: 14 LPTPKLSPEHPLFRQRRRG--RTWPGIARCATEVGTGWGGIVEDDLSELLQILPRDLRDN 71
Query: 91 VSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRA 148
+ P +L+EV++DLGR+P ARF SG L D +I+ +E A VG+F DNRA
Sbjct: 72 LQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQKAVGEFGGDNRA 131
Query: 149 GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTI 208
GI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF+G PGVGKTT+
Sbjct: 132 GIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLGRPGVGKTTV 191
Query: 209 IREIARVLANDYKKRV 224
+REIARVLA++++KRV
Sbjct: 192 MREIARVLADEFQKRV 207
>gi|159466478|ref|XP_001691436.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279408|gb|EDP05169.1| predicted protein [Chlamydomonas reinhardtii]
Length = 382
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
D G SLL +G PG GKTT++R+IAR LA+D V++VDTS+EI G +PH IG+
Sbjct: 206 DRFTTGGSLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGS 265
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
ARR++V + V++EAV+NH PQV+V+DE+G++ EA AA +I+QRG+ LVATAHG
Sbjct: 266 ARRLKVGRRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTD 325
Query: 307 IENLIMNPSLEMLIGGVQNVTL-GDEEAHRRGVQKTVLERKGPSTFSCAVEI 357
+ +++ NP L L+GG+Q V L G KT ER+G TF C VE+
Sbjct: 326 LRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTFRCLVEV 377
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTL-GDEEAHRRGVQKTV 342
EA AA +I+QRG+ LVATAHG + +++ NP L L+GG+Q V L G KT
Sbjct: 63 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 122
Query: 343 LERKGPSTFSCAVEI 357
ER+G TF C VE+
Sbjct: 123 TERRGEPTFRCLVEV 137
>gi|326500622|dbj|BAJ94977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 82 LLPEEMRIRVSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQV 139
+LP+++R + P +L+EV++DLGR+P ARF SG L D +I+ +E A V
Sbjct: 75 ILPKDLRDNLQNEPRRDQLLEVILDLGRQPEARFLGNSGGQYLRDNEISQLELEEAQRAV 134
Query: 140 GDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIG 199
G+F DNRAGI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF+G
Sbjct: 135 GEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRVGRAVNGHVDMVRDLLNYKESILFLG 194
Query: 200 PPGVGKTTIIREIARVLANDYKKRVM 225
PGVGKTT++REIARVLA++++KRV+
Sbjct: 195 RPGVGKTTVMREIARVLADEFQKRVV 220
>gi|325284450|ref|YP_004256990.1| AAA ATPase [Deinococcus proteolyticus MRP]
gi|324316514|gb|ADY27627.1| AAA ATPase [Deinococcus proteolyticus MRP]
Length = 316
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 161/301 (53%), Gaps = 40/301 (13%)
Query: 95 PELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHI----------EHATSQV-GDFA 143
P L ++ E++MD G +PLA LSD ++T ++ +H S V G +
Sbjct: 30 PNLTDVDEIIMDRG-QPLA------LRLSDLRVTYPYLLKNNEFDRIDQHMQSGVAGGWR 82
Query: 144 VDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL----VQDGASLLFIG 199
D R GI TLHR+S N G LT RVGRA+ G A L+ + VQ+ + + +G
Sbjct: 83 KDGRIGIPGTLHRLSREVNTAGITTKLTVRVGRALIGVAEPLRPVIVRAVQENSGIAIVG 142
Query: 200 PPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQH 259
PP VGKTT++R+IAR++A + ++I+DTS+EI G+ DIPH IG AR + V N Q
Sbjct: 143 PPAVGKTTLLRDIARIMAERLAQGLVIIDTSNEIAGDSDIPHRIIGKARVVAVGNPLHQG 202
Query: 260 KVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+ + N PQ ++ DEIG + + A RG+ + AT HG + ++ + +L L
Sbjct: 203 EKFARVIGNMGPQALLSDEIGYRDDIPIIRQNAPRGVSITATLHGKNMVRVVNSENLWPL 262
Query: 320 IGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSG 379
+G + G QK PS F+ A+E++ + RVH +A+++AIL+G
Sbjct: 263 LGVI-------------GRQKVE-----PSVFAQAIEVIGRGRYRVHEDFDASIEAILAG 304
Query: 380 R 380
+
Sbjct: 305 K 305
>gi|260804927|ref|XP_002597339.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
gi|229282602|gb|EEN53351.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
Length = 2613
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 130/243 (53%), Gaps = 21/243 (8%)
Query: 100 LIEVVMDLGRKPLARF-------------PSGDFSLSDCQITVHHIEHATSQVGDFAV-- 144
L+EV +D+GR P+AR P L+ +++ + T + F +
Sbjct: 2292 LVEVEIDIGRIPVARLDFHYQNKSSLYYNPDSPCLLATTRLSDQTLTRETLETILFGLPL 2351
Query: 145 ------DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
R + TLH IS ++N G ++GLT R G+AV G +LL D+V G S L +
Sbjct: 2352 ERSAIGQGRVLLKGTLHWISTLKNSSGEVVGLTLRRGQAVPGCLDLLWDVVTSGTSTLIM 2411
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G P G+TT++RE ARVL++ +RV++VDT EI G DIPHPGIG ARR+QV N Q
Sbjct: 2412 GCPCSGRTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDIPHPGIGGARRVQVHNRCDQ 2471
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
L A NH P I++DE+ T+ E A I GIQ+VA + +L+ N +
Sbjct: 2472 VSQLQTAARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLTDLLQNSVMRG 2531
Query: 319 LIG 321
L+G
Sbjct: 2532 LLG 2534
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 90/139 (64%)
Query: 153 TLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREI 212
TLH +S ++N G ++GLT R G+AV G +LL D+V G S L +G P GKTT++RE
Sbjct: 1513 TLHWVSTLKNSLGEVVGLTLRRGQAVPGCLDLLWDVVTSGTSTLIMGRPCSGKTTLLREW 1572
Query: 213 ARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQ 272
ARVL++ +RV++VDT +EI G DIPHPGIG ARR+QV N Q L A NH P
Sbjct: 1573 ARVLSDVCYRRVIVVDTRNEIAGGDDIPHPGIGGARRVQVHNRCDQVFQLQTAARNHSPD 1632
Query: 273 VIVIDEIGTKLEAMAASTI 291
I++DE+ T+ E A I
Sbjct: 1633 CIIVDEVQTQEEVTALQAI 1651
>gi|158421474|ref|YP_001527701.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
gi|158342717|gb|ABW35003.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
Length = 322
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 165/314 (52%), Gaps = 16/314 (5%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L LLP ++R V P ++ + E+ +D G+ + IT + + T++
Sbjct: 15 VLDLLPGDVRQLV--EPRIHLVEEIALDQGQNLKVKMDGLRLEYRRL-ITREDMIYLTAR 71
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
G F D R G+ TLHRISA + +G I +T RV RA+ G A L+ V+ + I
Sbjct: 72 AGKFREDGRRGLPGTLHRISADFDEEGIIDKVTVRVARAIEGVAEPLRAFVEQARGIAVI 131
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
GPP VGKTT++R+I R+ A ++++D+S+EI G+GD+PHP + RR +V + E Q
Sbjct: 132 GPPAVGKTTLLRDITRIRAEVKSSGLVVIDSSNEITGDGDVPHPMLSRVRRFKVGDPEQQ 191
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
L A+ NH P+ I++DE+G + + + G+ ++AT HG +++++ NP L
Sbjct: 192 APKLRRAIRNHGPEEILMDEVGYNGDVPLLVSAVRLGVTVIATMHGRVVKDVLRNPPLLP 251
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+G + G+ L ++ + F A+E+ K + VH LEA A+L
Sbjct: 252 LLGVAIDERTGE------------LIKRADTCFGMAIEVHGKGKYLVHEDLEAVTQALLC 299
Query: 379 GRIPNVEIRRMQHD 392
G P IR Q D
Sbjct: 300 GEEPE-GIRVGQWD 312
>gi|260804935|ref|XP_002597343.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
gi|229282606|gb|EEN53355.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
Length = 3045
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 154/311 (49%), Gaps = 23/311 (7%)
Query: 100 LIEVVMDLGRKPLARF-------------PSGDFSLSDCQITVHHIEHATSQVGDFAV-- 144
L+EV +D+GR P+AR P L+ +++ + T + F +
Sbjct: 2725 LVEVEIDIGRIPVARLDFHYQNKSSLYYNPDSPCLLATTRLSDQTLTRETLETILFGLPL 2784
Query: 145 ------DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFI 198
R + TLH IS ++N G ++GLT R G+AV G +LL D+V G S L I
Sbjct: 2785 ERSAIGQGRVLLKGTLHWISTLKNSLGEVVGLTLRRGQAVPGCLDLLWDVVTSGTSTLII 2844
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQ 258
G P GKTT++RE ARVL++ +RV++VDT EI G DI HPGIG ARR+QV N Q
Sbjct: 2845 GRPCSGKTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDITHPGIGGARRVQVHNRCDQ 2904
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
L A NH P I++DE+ T+ E A I GIQ+VA + +L+ N +
Sbjct: 2905 VFQLQTAARNHSPDFIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLPDLLHNSVMRG 2964
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD-AIL 377
L+G + + + P F AV I S+ + V+ + + V ++L
Sbjct: 2965 LLGLSDPASTFPQTPSTSESVPPAFPQTLP-VFQAAVVIHSRDMVSVYSDVASFVRVSLL 3023
Query: 378 SGRIPNVEIRR 388
GR P + R+
Sbjct: 3024 EGRFPLAQQRK 3034
>gi|386854327|ref|YP_006258707.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002656|gb|AFD27843.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 314
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 163/331 (49%), Gaps = 42/331 (12%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH-HIE 133
E +L LPEE+R V + +L L E+++D R+ L+D +IT HI+
Sbjct: 10 EYAAILERLPEEIRAIVKD--DLPLLDEIIID-------RYSLLSVRLADMRITYPLHID 60
Query: 134 HAT----------SQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN 183
T G + D R GI TLHR+S N +T RVGRA+ G A
Sbjct: 61 DRTFDRIDALMQQDVPGGWRKDGRIGIPSTLHRLSRETNVSQLTSMITVRVGRALMGVAE 120
Query: 184 LLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDI 239
L+D++ D + + IGPP GKTT++R+IAR+LA ++I+DTS+EI G+ D
Sbjct: 121 PLRDVLYDAVTNEYGIAIIGPPAAGKTTLLRDIARILAERLGSGLVIIDTSNEIAGDSDH 180
Query: 240 PHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLV 299
HP +G ARR+ V N Q + A+ N P+ ++ DEIG + + + A RG+ +
Sbjct: 181 KHPIVGQARRVPVGNPLWQGEKFARAIGNMGPKALLSDEIGYRDDIPVIAMNAPRGVSVT 240
Query: 300 ATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVS 359
AT HG + + + +L ++G V + P+ F A+E+
Sbjct: 241 ATLHGKNMRRVAHSQNLWPILGIKDGV------------------KTEPAVFKIAIEVPR 282
Query: 360 KTELRVHHSLEATVDAILSGRIPNVEIRRMQ 390
+ RVH +A++ ++L+G P IR ++
Sbjct: 283 RGFFRVHEDFDASLKSLLAGEEPTEGIREIR 313
>gi|323452315|gb|EGB08189.1| hypothetical protein AURANDRAFT_71632 [Aureococcus anophagefferens]
Length = 1677
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 181/357 (50%), Gaps = 42/357 (11%)
Query: 79 LLALLPEEMRIRVSEHPELYE-------LIEVVMDLGRKPLARFPSGDFSLSDCQ----I 127
LLA++P + R V+ E + L++V + GR P +F + ++ +
Sbjct: 471 LLAMVPAKARPGVTAALEARDAEDPYGALVDVKLAAGRPPRLQFGGANPAVVTVGGAPLL 530
Query: 128 TVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD 187
T + A + + A RA + LHR+S + +R GA+ L+ RVGR V+G+A+ L D
Sbjct: 531 TAEDLARACAPLTFDAATERAALPGQLHRVSRVLHR-GAVAALSLRVGRHVAGAAHRLSD 589
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKR------VMIVDTSSEIGGNGDIPH 241
+++ G S+LF+G PG GK+T +R+ A L Y++R +VD S E+GG+G H
Sbjct: 590 VLRRGESVLFLGAPGAGKSTALRDAA-ALVGAYRERHAPVGDCWVVDQSLELGGDGLAAH 648
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
+ A R E H+ ++ + NH P IV+DE+ + A+AA+ + +RG+QL+A+
Sbjct: 649 ASLRPAERYPC-QGEALHEAMLRVLRNHTPAAIVVDELVDRAAALAAADVGKRGVQLLAS 707
Query: 302 AH----GVT------IENLIMNPSLEMLIGGVQNVTLGDEEAHRRG-----VQKTVLERK 346
AH G T + L+ + +L ++G + VTL D EA RR +K +R
Sbjct: 708 AHAWEKGATSAHARSLAELVDDAALAPVLGDFEIVTLSDREAARRAKTQRDPRKVRRQRV 767
Query: 347 GPSTFSCAVEIVSKT-----ELRVHHSLEATVDAILSGRIPNVEIR--RMQHDGSKE 396
+TF C VE+ ++ E V + A VDAI+ + + R HD S E
Sbjct: 768 RNATFGCVVELRPRSPGRPGEWSVVLDVNAAVDAIVENGAYDAQARFYDAAHDLSAE 824
>gi|313667305|ref|YP_004049706.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
gi|313153936|gb|ADR37786.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
Length = 345
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 12/254 (4%)
Query: 75 ELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFS-----LSDCQITV 129
+L L+ LP + R EHP+L E + +GR PL GD+ D
Sbjct: 9 DLEALIQRLPAKFRRPFREHPDLSE---ATLQIGR-PLT-VSWGDWERRFVEYEDLIPAR 63
Query: 130 HHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS--ANLLQD 187
I+ Q D RAGI T HR+SAI +R I+G T RV R G+ +L +
Sbjct: 64 EDIQRIAQQFAGIKDDGRAGIDGTAHRVSAIFDRMNNIVGFTVRVARHFPGALPESLKLE 123
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L++ S+L +G PG GKTT++R +A A+ + I+DTS+EIGG G+ P + +A
Sbjct: 124 LLRSKGSVLIVGAPGSGKTTLLRAVAAAFADAIGPHLNIIDTSNEIGGVGETPIHELRHA 183
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R QVPN Q +V+ A+ NH P V+++DE+G + A+RG+Q++AT HG I
Sbjct: 184 RWHQVPNPAKQPEVIRRAIANHGPLVLILDEVGYHGDVPEVEAAARRGVQVIATVHGYGI 243
Query: 308 ENLIMNPSLEMLIG 321
++I N L+G
Sbjct: 244 FDVIENAHYSPLLG 257
>gi|298714683|emb|CBJ27608.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 354
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 32/287 (11%)
Query: 127 ITVHHIEHATSQV---GDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN 183
+T +H+ ++ G F DN AG LHR+ +R++ G I G+T RVGR G A+
Sbjct: 29 VTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGKIYGVTIRVGRYAKGMAD 88
Query: 184 LLQDLV--------------QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDT 229
++ DL+ Q AS+L +G G GKTT++R++ R L++ + V+IVDT
Sbjct: 89 MVDDLLFNHHTATGSGKRASQAPASILVLGRHGAGKTTLVRDMCRKLSS--HETVVIVDT 146
Query: 230 SSEIGGNGDIPHP-GIGN-ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
S+IGG G +PH IG +RR+ VP QH+V+++A NH PQ IV+DEI ++L+ A
Sbjct: 147 RSDIGGAGVVPHRRAIGEESRRVMVPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEA 206
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERK- 346
+ RGI++VA A G + ++ +P + +GG++++ A+ +ER+
Sbjct: 207 CMAVKARGIRVVAGAVG-DLPYVLDSPEIGAALGGLEDIQ---RSANVDDDSDDQMERRA 262
Query: 347 GPSTFSCAVEIVSKT-----ELRVHHSLEATVDAIL-SGRIPNVEIR 387
G F VE+ + + V ++EA VD +L G + E+R
Sbjct: 263 GSPVFEAVVELEGRAGGAAPQGAVVTNVEAVVDELLDKGCVTRPEMR 309
>gi|223949555|gb|ACN28861.1| unknown [Zea mays]
gi|414865050|tpg|DAA43607.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 192
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Query: 31 FPYLRSSPNSTFFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIR 90
P + SP F + G + + + V + +L LL +LP ++R
Sbjct: 14 LPTPKLSPEHPLFRQRRRG--RTWPGIARCATEVGTGWGGIVEDDLSELLQILPRDLRDN 71
Query: 91 VSEHPELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQVGDFAVDNRA 148
+ P +L+EV++DLGR+P ARF SG L D +I+ +E A VG+F DNRA
Sbjct: 72 LQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQKAVGEFGGDNRA 131
Query: 149 GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIG 199
GI TLHRISAIR+RKG ++GLTCRVGRAV+G ++++DL+ S+LF+G
Sbjct: 132 GIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLG 182
>gi|260804937|ref|XP_002597344.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
gi|229282607|gb|EEN53356.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
Length = 1910
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 149/305 (48%), Gaps = 37/305 (12%)
Query: 95 PELYELIEVVMDLGRKPLARF--PSGDFSLSDCQITVHHIEHATSQVGDFAV-------- 144
P L L+EV MD+GR P+ARF P L+ +++ + T + F +
Sbjct: 1621 PILDNLVEVEMDIGRIPVARFYNPETPRMLAATRLSDQALTRETLETILFGLPLERSTIG 1680
Query: 145 DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVG 204
R + TLH IS ++N G ++GLT R G+AV G +LL D+V G S L +G P G
Sbjct: 1681 QGRVLLRGTLHWISTLKNSLGEVVGLTLRRGQAVPGCLDLLWDVVTSGTSTLIMGRPCSG 1740
Query: 205 KTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIE 264
KTT++RE ARVL++ +RV++VDT +E+ D QV S++Q
Sbjct: 1741 KTTLLREWARVLSDVCYRRVIVVDTRNEVHNRCD------------QV--SQLQ-----T 1781
Query: 265 AVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQ 324
A NH P I++DE+ T+ E A I GIQ+VA + +L+ N + L+G
Sbjct: 1782 AARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLTDLLQNSVMRGLLG--- 1838
Query: 325 NVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVD-AILSGRIPN 383
L D A + P F A+ I S+ + V+ + + V ++L GR P
Sbjct: 1839 ---LSDPVASTSAPLGGTFPQTLP-VFQAAMVIHSRDMVSVYSDVASFVRVSLLEGRFPL 1894
Query: 384 VEIRR 388
+ R+
Sbjct: 1895 AQQRK 1899
>gi|397565678|gb|EJK44725.1| hypothetical protein THAOC_36714 [Thalassiosira oceanica]
Length = 579
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 66/300 (22%)
Query: 100 LIEVVMDLGRKPLARFPSGDFSLSD---CQITVHHIEHATSQVGDFAVDNRAGISRTLHR 156
+I++ +DLGR+P G L+D ++ HI+ T+++ DF DNRAGI LHR
Sbjct: 318 VIDISLDLGRRPYCWHNRGRAFLADDPAVKVQGFHIDAITAKLQDFGNDNRAGIDGQLHR 377
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVL 216
ISAIRN IIGLT R+GR + G+A+++ D++ S+L +G ++ ++ E +
Sbjct: 378 ISAIRNNSKNIIGLTVRIGRHIEGNADMVCDIIDGNKSVLLLGESLSKQSEVMIECVQ-- 435
Query: 217 ANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
++ VM++D
Sbjct: 436 --NHTPSVMVID------------------------------------------------ 445
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHR- 335
EIG + E AA T RG++++A+AHG + +L+ N + LIGG++ TLGD EA
Sbjct: 446 -EIGRRNEVEAAQTSKNRGVRMIASAHG-DLRSLLKNKEIRGLIGGLETTTLGDVEAKEL 503
Query: 336 ------RGVQKTVLERKGPSTFSCAVEIVSK--TELRVHHSLEATVDAILSGRIPNVEIR 387
+ ++KT+ R F +E+ E + VDAIL G +V+ R
Sbjct: 504 QKKTGSKTLEKTLTTRAAAPIFEVIIELKRGRLNEWHIVSDSTKAVDAILRGEKYHVQKR 563
>gi|105672147|gb|ABF74689.1| AAA [Lingulodinium polyedrum]
Length = 656
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 15/302 (4%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSG---DFSLSDCQITVHHI 132
L L++ LP +R S L + ++V+D+GR+P + +G F +D + V
Sbjct: 326 LDELISALPSHLRQDFSGSVHLCQ--QLVLDVGRRP--QVLAGRRRAFLRADPDVVVSEA 381
Query: 133 EHATSQVGDFAVDNRA---GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV 189
+ + + D R+ + TL+R S + + G + GLT VG AV G+A ++ DL+
Sbjct: 382 DLSETMRRLRLADGRSRLVPVGTTLNRASTLHDESGGLCGLTLHVGCAVLGAAGMIGDLL 441
Query: 190 Q-DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
D S L +GP G GKTT+ R++AR+LA + + VM+VDT+ E+GG G + H +G AR
Sbjct: 442 AADLGSWLLLGPTGSGKTTVTRDVARLLAEE--RSVMVVDTARELGGAGVVAHSSLGLAR 499
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R+ V ++E + EA+ +H +V+V+D + + A+ + G LVA+A G
Sbjct: 500 RLLVDSAEQHLAAVEEAILSHAAEVVVVDGMAVQSLISASRLAREHGACLVASAVG-DFR 558
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHS 368
++ G Q+ H G PS F+ AVE++ R H
Sbjct: 559 SMAQAGVWGTPGTGQQSWGGLSASGHVEGCAARGFSGGAPS-FTAAVELLRADFHRCHVV 617
Query: 369 LE 370
LE
Sbjct: 618 LE 619
>gi|386854853|ref|YP_006262593.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002330|gb|AFD27518.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 301
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV---QDGASL 195
+G + D R G+ TLHR + + + +T RV +A G A L+ + QDG +
Sbjct: 51 LGAWRDDGRLGMEGTLHRFGRMDTAQQTSL-VTVRVAKAFVGLAEPLRPWLEKAQDG--V 107
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNS 255
+ IG PG GKT ++R++ R+L R+ + D+S+EI G+G PH R+ + +
Sbjct: 108 IIIGLPGAGKTALLRDVNRILGERLAGRLFVCDSSNEILGDGIQPHSITDWLSRVPIGDP 167
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
++Q L V+N P+ +V+DE+ + +A A RG+++V T H
Sbjct: 168 KLQLSKLNMVVKNFQPRWMVVDEVSSPDDARAIGYARSRGVRVVMTWH 215
>gi|331269432|ref|YP_004395924.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
gi|329125982|gb|AEB75927.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
Length = 319
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 32/263 (12%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+E+R ++ + +L E+ + + +K + + + L D + I+ +
Sbjct: 27 VLYILPKELRSKLESIKSVDKLQEIRIKINKKLIVYIGNIEIIL-DYLVKKEDIKVILQR 85
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R GI + ++ I+N I L R+ R V
Sbjct: 86 ISNYSIYAFEEEIKQGYITIKGGHRVGICGSCVIENEKVKTIKN----IASLNIRICREV 141
Query: 179 SGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
G +N + + + + + + I PP GKTT+IR+I+R L+ D KK++ IVD SE+G
Sbjct: 142 IGCSNNIMPYILNNSRVFNTIIISPPKCGKTTLIRDISRNLS-DAKKKICIVDERSEVGA 200
Query: 236 NGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+ +P +G R V ++ ++ + +I A+ + P++IV DEIGT + +
Sbjct: 201 CFEGVPQMNVG--LRTDVFDNCVKSEGIIMAIRSMAPEIIVCDEIGTYKDMESIIMAMNS 258
Query: 295 GIQLVATAHGVTIENLIMNPSLE 317
G+ L+ T HG IE+L P +
Sbjct: 259 GVNLITTIHGFGIEDLYRRPVFK 281
>gi|253682298|ref|ZP_04863095.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
gi|253562010|gb|EES91462.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
Length = 298
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 32/260 (12%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+E+R ++ + + E+ + + +K + + + L D + I+ +
Sbjct: 6 VLYILPKELRAKLESIKNIDKFQEIRIKINKKLILYVGNTEIIL-DYLVKKEDIKIILQR 64
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R GI + ++ I+N I L R+ R V
Sbjct: 65 ISNYSIYAFEEELKQGYITIKGGHRVGICGSCVIENEKVKTIKN----IASLNIRICREV 120
Query: 179 SG-SANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
G S N++ ++ D L + I PP GKTT++R+I+R L+ D KK++ IVD SEIG
Sbjct: 121 IGCSNNIMPYILNDDRVLNTIIISPPKCGKTTLLRDISRNLS-DAKKKICIVDERSEIGA 179
Query: 236 NGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+ +P IG R V ++ ++ + +I A+ + P+VI+ DEIGT + +
Sbjct: 180 CFEGVPQMNIG--LRTDVFDNCVKSQGIIMAIRSMAPEVIICDEIGTYKDMESIIMAMNS 237
Query: 295 GIQLVATAHGVTIENLIMNP 314
G+ L+ T HG IE+L P
Sbjct: 238 GVNLITTIHGFGIEDLYRRP 257
>gi|317968813|ref|ZP_07970203.1| R3H domain-containing protein [Synechococcus sp. CB0205]
Length = 240
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 453 LYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHDIPI 512
L+ G+ E + Q I+ ++ VQL + + EAD +LA +L + ++ A+ +PI
Sbjct: 77 LFNAGLSEPLIDQAIRSRRLP--VQLVEAVEEADVVLAARQQLGQRPELRRRAQDAGLPI 134
Query: 513 YATKTSSLVQITKALRALI----DDHTGEFKDLRSEDKINLSEKIDALEEARVAIEQVVI 568
K +L QI + L L+ D R + + ++ALEE R+A+EQVV+
Sbjct: 135 LVIKADTLPQIQRGLERLLQRREDRPEATNAAARPAGASSRDDALEALEECRLAVEQVVL 194
Query: 569 PKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
P+G+ VELLPR I +Q +L +YQL G RLR+ P
Sbjct: 195 PQGQPVELLPRTEAIRRMQAELAARYQLTSAEFGSGSQLRLRLFP 239
>gi|188586330|ref|YP_001917875.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351017|gb|ACB85287.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 28/196 (14%)
Query: 169 GLTCRVGRAVSGSANLLQDLVQDG-----ASLLFIGPPGVGKTTIIREIARVLANDYKK- 222
G+ R+ R + G+ L D + D + L IGPPG GKTTI+R++ R+L+ K
Sbjct: 118 GINFRIAREIKGAGKKLVDKLIDKRINSFLNTLLIGPPGCGKTTILRDLTRLLSTGNKSF 177
Query: 223 ----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
++ ++D SEI G+ IP IG R V + + K ++ AV P++IV D
Sbjct: 178 DRTFKITLIDERSEISGSVRGIPQKEIG--LRTDVLDGCPKAKGMMMAVRAMSPEIIVTD 235
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRG 337
EIGTK + A G++L+ + HG + E L+ P + L+ H
Sbjct: 236 EIGTKEDINAVKEAMNSGVKLLLSIHGDSYETLLKRPGIPELL-------------HDGA 282
Query: 338 VQKTVL--ERKGPSTF 351
++K V+ R+GP T
Sbjct: 283 IEKLVILSRRRGPGTI 298
>gi|118444024|ref|YP_878042.1| stage III sporulation protein AA [Clostridium novyi NT]
gi|118134480|gb|ABK61524.1| stage III sporulation protein AA, SpoIIIAA [Clostridium novyi NT]
Length = 298
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 32/260 (12%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+ +LP+EM++++ + +L E+ + + KPL + + D I I+ +
Sbjct: 6 VFYVLPKEMQMKLQSITIIDKLQEIRIKVN-KPLIVYLENKEIILDYIIKKEDIKTILQR 64
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R GI + + I+N I L R+ R V
Sbjct: 65 ISNYSIYAFEEEIKQGYITIKGGHRVGICGSCVIQNETVKTIKN----IASLNIRICREV 120
Query: 179 SGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
G +N + + G ++L I PP GKTT+IR+I R L+ KK+V I+D SEI
Sbjct: 121 LGCSNKVMPYILQGENVLNTIIISPPKCGKTTLIRDITRNLSTA-KKKVCIIDERSEIAS 179
Query: 236 NGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+ +P +G R + ++ ++ + +I A+ + P+VIV DEIGT + +
Sbjct: 180 CFEGVPQMDVG--IRTDILDNCIKSQGIIMAIRSMAPEVIVCDEIGTHSDIQSIVMAMNS 237
Query: 295 GIQLVATAHGVTIENLIMNP 314
G+ L+ T HG IE+L P
Sbjct: 238 GVNLITTIHGFGIEDLYRRP 257
>gi|20807732|ref|NP_622903.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|254479690|ref|ZP_05092986.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
gi|20516285|gb|AAM24507.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|214034376|gb|EEB75154.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
Length = 330
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 17/176 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD--GA--SLLFIGPPGVGKTTIIREI 212
I I+N + G R+ + V G+A+ + + + D G+ +LL I PP GKTT++R+I
Sbjct: 121 IKIIKN----VSGYNYRISKEVLGAADEIMEYLIDRQGSVYNLLIISPPQCGKTTLLRDI 176
Query: 213 ARVLANDY----KKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
AR L++ + K+V I+D SEI G NG +P +G R V + + + +I A+
Sbjct: 177 ARALSDGFMGFGGKKVCIIDERSEIAGCYNG-VPQLNVGI--RTDVLDRCPKAEGMIMAI 233
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
+ PQV+V DEIG K + A + G++++ T H IE+L P L+ L+ G
Sbjct: 234 RSMSPQVVVTDEIGKKEDIEALRHVLNAGVKIITTVHAKDIEDLKKRPLLKDLVEG 289
>gi|319651504|ref|ZP_08005632.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
gi|317396819|gb|EFV77529.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
Length = 307
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 98/175 (56%), Gaps = 17/175 (9%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSA-NLLQDLVQDGA-SLLFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A NL+ + +DG + IGPP GKTT++R+IA
Sbjct: 102 KVKAIRD----ISSFNIRIAREKIGIAQNLIPRIYRDGWLHTMIIGPPQTGKTTLLRDIA 157
Query: 214 RVLA-----NDY-KKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
R+++ ND+ +V IVD SEI G NG IP GN R+ V ++ + + ++
Sbjct: 158 RIISSGDPNNDFPASKVGIVDERSEIAGCVNG-IPQMTFGN--RIDVLDACPKAEGMMMM 214
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ + P+V+V+DEIG +A A GI+L+ T HG ++E + P+L+ ++
Sbjct: 215 IRSMSPEVLVVDEIGRHEDAEAIMEAVNAGIKLIMTTHGNSLEEIKKRPTLKAIL 269
>gi|168214407|ref|ZP_02640032.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
gi|170714158|gb|EDT26340.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
Length = 294
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 39/267 (14%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+ A+LP+++ + + L +L E+ + +G KPL ++ + I + ++ +
Sbjct: 4 IFAVLPDKINSCLKDKSNLNKLQEIRVKVG-KPLNIVLDNTETIFNYVIRIEDVKAIIQK 62
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R G++ + I IRN I L RV R +
Sbjct: 63 ISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREI 118
Query: 179 SGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDT 229
G +N L+ LV++ + L I PP GKTT++R+I R ++N KR +++D
Sbjct: 119 VGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDE 178
Query: 230 SSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
SEI NG IP +G R V ++ ++ + ++ AV P+VI+ DEIGT +
Sbjct: 179 RSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEG 235
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNP 314
G+ ++AT HG +E L P
Sbjct: 236 LMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|452856213|ref|YP_007497896.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080473|emb|CCP22236.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 307
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+M L +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKM---------LWEE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|394992156|ref|ZP_10384948.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429505855|ref|YP_007187039.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|393806985|gb|EJD68312.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429487445|gb|AFZ91369.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 307
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKMLW---------EE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|385265443|ref|ZP_10043530.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
gi|385149939|gb|EIF13876.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
Length = 307
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKMLW---------EE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|375362979|ref|YP_005131018.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731034|ref|ZP_16170160.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|371568973|emb|CCF05823.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075188|gb|EKE48175.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 307
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRVDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKMLW---------EE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|291520786|emb|CBK79079.1| stage III sporulation protein AA [Coprococcus catus GD/7]
Length = 351
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPP 201
+R GI+ + L + IR+ + I L R+ V G A+ L+ L ++G S L + PP
Sbjct: 102 HRVGIAGKVLSDGNGIRSIR-PITFLNVRLAHEVRGCADELMPWLYEEGRPCSTLILSPP 160
Query: 202 GVGKTTIIREIARVLAN----DYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSE 256
G GKTT++R++ R +N + +RV +VD SEI IP +G R V +
Sbjct: 161 GCGKTTMLRDVIRQFSNGCGQEAGRRVGVVDERSEIAACYRGIPQNDMGI--RTDVLDGC 218
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+H + + + P+++ +DEIG++ + A + G L+ATAHG ++E + M P+L
Sbjct: 219 AKHMGMQMMLRSMTPEILAVDEIGSRTDKEAIDAVMNCGCCLLATAHGASMEKMQMRPAL 278
Query: 317 EML 319
+
Sbjct: 279 RQM 281
>gi|384266059|ref|YP_005421766.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899079|ref|YP_006329375.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
gi|380499412|emb|CCG50450.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173189|gb|AFJ62650.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
Length = 307
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKMLW---------EE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|154686707|ref|YP_001421868.1| hypothetical protein RBAM_022760 [Bacillus amyloliquefaciens FZB42]
gi|154352558|gb|ABS74637.1| SpoIIIAA [Bacillus amyloliquefaciens FZB42]
Length = 307
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDE 331
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML +E
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWDMKDLVKRPSLKMLW---------EE 269
Query: 332 EAHRRGVQKTVLERKGPSTFS 352
R V+ + R+GP T S
Sbjct: 270 NVFDRYVELS--RRRGPGTIS 288
>gi|255524184|ref|ZP_05391144.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296186639|ref|ZP_06855041.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|255512169|gb|EET88449.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296048676|gb|EFG88108.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
Length = 308
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGKTTIIREIARVLANDYK- 221
+I L R+ R V G ++ L D + + + + I PP GKTT+IR+I R +++ K
Sbjct: 111 SIASLNIRICREVIGCSDPLMDFIIKNNNVINTIVISPPKCGKTTLIRDIVRNISDGMKQ 170
Query: 222 -----KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
K+V ++D SEIG NG IP +G R + +S ++ + ++ A+ + P V+
Sbjct: 171 KAFTGKKVCVIDERSEIGACYNG-IPQLKLG--LRTDILDSCLKSQGIMMAIRSMSPDVV 227
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
V DEIGT + + G+ L+ T HG IE+L P + ++
Sbjct: 228 VCDEIGTYKDMDSILFALNSGVNLITTIHGYGIEDLYKRPVFKEIV 273
>gi|308174238|ref|YP_003920943.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|384160096|ref|YP_005542169.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|384165021|ref|YP_005546400.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|384169160|ref|YP_005550538.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
gi|307607102|emb|CBI43473.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|328554184|gb|AEB24676.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|328912576|gb|AEB64172.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|341828439|gb|AEK89690.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
Length = 307
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 39/284 (13%)
Query: 85 EEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAV 144
EE+RIRV EL RK F S + D Q+ + + + + + +
Sbjct: 28 EEIRIRVDRPVELI----------RKGQPLFLSYICTAGDAQLILSRLSNYSMYTLEEEL 77
Query: 145 DNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSANLLQDLV--QDGA 193
R HR+ + GA+ GL R+ R G A L + ++
Sbjct: 78 KKGYITIRGGHRVGLAGRVIVENGAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWL 137
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNAR 248
+ L IGPP GKTT++R++AR+ + K K+ I+D SEI G IP G R
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIIDERSEIAGCLRGIPQHSFG--R 195
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R+ V ++ + + L+ + + P V+++DEIG ++ A G+ ++ +AHG ++
Sbjct: 196 RVDVLDACPKAEGLMMMIRSMSPDVMIVDEIGRIEDSEALMEALHAGVSVIVSAHGWNMK 255
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
+L+ PSL+M L +E+ R V+ + R+GP T S
Sbjct: 256 DLVKRPSLKM---------LWEEKVFDRYVELS--RRRGPGTIS 288
>gi|381210320|ref|ZP_09917391.1| stage III sporulation protein AA [Lentibacillus sp. Grbi]
Length = 325
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 17/186 (9%)
Query: 146 NRAGIS---RTLH-RISAIRNRKGAIIGLTCRVGRAVSGSA-NLLQDLVQDG-ASLLFIG 199
+R G+S TLH ++ AIR+ I R+ + G+A L+ L + + L IG
Sbjct: 89 HRVGLSGKVNTLHGQVKAIRH----ITFFNIRIAKQTIGAALPLIPYLYHNKYVNTLIIG 144
Query: 200 PPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPN 254
PP GKTT+IR++AR++ + + K +V +VD SEIGG + IP +G R V +
Sbjct: 145 PPQTGKTTLIRDLARMIGSGWDKAGAHKVGVVDERSEIGGSHKGIPQHDLG--VRTDVMD 202
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ + + ++ + + P+V+V+DEIG++ + A G+ +V T H ++E L P
Sbjct: 203 ACPKDEGMMMMIRSMSPEVLVVDEIGSESDVQALMEAVNAGVAVVCTIHSSSLEALKKRP 262
Query: 315 SLEMLI 320
SL+ L
Sbjct: 263 SLKPLF 268
>gi|398311387|ref|ZP_10514861.1| stage III sporulation protein AA [Bacillus mojavensis RO-H-1]
Length = 307
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 82 LLPEEMRIRVSEHPELYELIEV---------VMDLGRKPLARFPSGDFSLSDCQITVHHI 132
+LPE M+ +SE PE ++ +E+ ++L RK F S + D + + +
Sbjct: 7 VLPESMKNALSEIPE-HQWLEIEEIRIRVNRPVELIRKGQPLFLSYAGTAEDAHLILSRL 65
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN 236
LL L Q+G + L IGPP GKTT++R++AR LA+ K R+ IVD SEI G
Sbjct: 126 PLLTYLHQNGWLNTLIIGPPQTGKTTLLRDLAR-LASSGKNRIAPVKTGIVDERSEIAGC 184
Query: 237 -GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
IP G +R+ V ++ + + L+ + + P+VI++DEIG + A G
Sbjct: 185 LRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRAEDTDALLEALHAG 242
Query: 296 IQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
+ ++ +AHG +I +L+ PSL+ L +E+A R ++ + KGP T S
Sbjct: 243 VSVIVSAHGWSISDLMKRPSLK---------RLWEEKAFDRYLELS--RTKGPGTIS 288
>gi|387929684|ref|ZP_10132361.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
gi|387586502|gb|EIJ78826.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
Length = 307
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGA-SLLFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A+ L+ L DG + IGPP GKTT++R+IA
Sbjct: 102 KVKAIRD----ISSFNIRIARERIGIADCLVPFLFHDGWLHTMIIGPPQTGKTTLLRDIA 157
Query: 214 RVLANDYK------KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R+++ + +V IVD SEI G IP GN R+ V ++ + + ++ +
Sbjct: 158 RIISTGNEDLGFGASKVGIVDERSEIAGCVKGIPQLTFGN--RIDVLDACPKAEGMMMMI 215
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+V+DEIG + +A+A GI+L+ T HG ++E + PSL+ ++
Sbjct: 216 RSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLEEVRKRPSLKNIL 269
>gi|422874752|ref|ZP_16921237.1| stage III sporulation protein AA [Clostridium perfringens F262]
gi|380304393|gb|EIA16682.1| stage III sporulation protein AA [Clostridium perfringens F262]
Length = 294
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIRE 211
+ I IRN I L RV R + G +N L+ LV++ + L I PP GKTT++R+
Sbjct: 99 NSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRD 154
Query: 212 IARVLANDYK------KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
I R ++N KR +++D SEI NG IP +G R V ++ ++ + ++
Sbjct: 155 ITRNISNGISQIGFKGKRTVVIDERSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMM 211
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
AV P+VI+ DEIGT + G+ ++AT HG +E L P
Sbjct: 212 MAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|160934305|ref|ZP_02081692.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
gi|156866978|gb|EDO60350.1| putative stage III sporulation protein AA [Clostridium leptum DSM
753]
Length = 336
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 125 CQITVHHIEHATSQ-VGDFAVDNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVS 179
C +V+ +H Q A +R G+ T +R+S IR+ I L R+ R V
Sbjct: 91 CSYSVYSHQHEIRQGFVTMAGGHRVGVCGTAVYEENRVSGIRD----ISSLNIRIAREVY 146
Query: 180 GSAN-LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGN-G 237
G+A+ LL++L ++ + LL GPP GKTTI+R++AR L+ KK V+++D E+GG
Sbjct: 147 GAADELLRELDKEISGLLIAGPPSSGKTTILRDLARQLSIKGKK-VVVIDERGELGGAFQ 205
Query: 238 DIPHPGIGNARRMQ-VPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
I +G + + P E +++AV P++I+ DE G++ EA A G+
Sbjct: 206 GICQNDLGLSDVLTGFPKGEG----ILQAVRCLSPELIICDEAGSRQEAAAIEEGLNAGV 261
Query: 297 QLVATAHGVTIENL 310
L+ T H ++E +
Sbjct: 262 GLITTLHAGSLEEI 275
>gi|168215461|ref|ZP_02641086.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
gi|182382302|gb|EDT79781.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
Length = 294
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIRE 211
+ I IRN I L RV R + G +N L+ LV++ + L I PP GKTT++R+
Sbjct: 99 NSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRD 154
Query: 212 IARVLANDYK------KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
I R ++N KR +++D SEI NG IP +G R V ++ ++ + ++
Sbjct: 155 ITRNISNGISQIGFKGKRTVVIDERSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMM 211
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
AV P+VI+ DEIGT + G+ ++AT HG +E L P
Sbjct: 212 MAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|365159017|ref|ZP_09355204.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626006|gb|EHL77015.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
Length = 308
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL++++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKVVL 267
>gi|110800786|ref|YP_696516.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|168206113|ref|ZP_02632118.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|168210804|ref|ZP_02636429.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|169343721|ref|ZP_02864720.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|182625637|ref|ZP_02953406.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|422346502|ref|ZP_16427416.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
gi|110675433|gb|ABG84420.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|169298281|gb|EDS80371.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|170662470|gb|EDT15153.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|170711143|gb|EDT23325.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|177909039|gb|EDT71514.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|373226047|gb|EHP48374.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
Length = 294
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIRE 211
+ I IRN I L RV R + G +N L+ LV++ + L I PP GKTT++R+
Sbjct: 99 NSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRD 154
Query: 212 IARVLANDYK------KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
I R ++N KR +++D SEI NG IP +G R V ++ ++ + ++
Sbjct: 155 ITRNISNGISQIGFKGKRTVVIDERSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMM 211
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
AV P+VI+ DEIGT + G+ ++AT HG +E L P
Sbjct: 212 MAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|196034946|ref|ZP_03102353.1| stage III sporulation protein AA [Bacillus cereus W]
gi|195992485|gb|EDX56446.1| stage III sporulation protein AA [Bacillus cereus W]
Length = 308
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 28/270 (10%)
Query: 76 LGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHA 135
+ +L +LP+ M+ V + L E+ + +GR PL G+ D +T H
Sbjct: 1 MNEVLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIHL 59
Query: 136 TSQVGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVS 179
+++ F++ R ++ R HRI + K A+ R+ R
Sbjct: 60 LNKLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKI 119
Query: 180 GSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSS 231
G A L + + L + IGPP GKTT++R++AR ++ +V IVD S
Sbjct: 120 GIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERS 179
Query: 232 EIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAST 290
EI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 180 EIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIME 237
Query: 291 IAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 238 AVHAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|110801582|ref|YP_699116.1| stage III sporulation protein AA [Clostridium perfringens SM101]
gi|110682083|gb|ABG85453.1| stage III sporulation protein AA [Clostridium perfringens SM101]
Length = 294
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIRE 211
+ I IRN I L RV R + G +N L+ LV++ + L I PP GKTT++R+
Sbjct: 99 NSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRD 154
Query: 212 IARVLANDYK------KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
I R ++N KR +++D SEI NG IP +G R V ++ ++ + ++
Sbjct: 155 ITRNISNGISQIGFKGKRTVVIDERSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMM 211
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
AV P+VI+ DEIGT + G+ ++AT HG +E L P
Sbjct: 212 MAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|18310815|ref|NP_562749.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
gi|18145497|dbj|BAB81539.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
Length = 294
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 39/267 (14%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+ A+LP+++ + + L +L E+ + +G KPL ++ + I ++ +
Sbjct: 4 IFAVLPDKINSCLKDKSNLNKLQEIRVKVG-KPLNIVLDNTETIFNYVIRREDVKAIIQK 62
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R G++ + I IRN I L RV R +
Sbjct: 63 ISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREI 118
Query: 179 SGSAN-LLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDT 229
G +N L+ LV++ + L I PP GKTT++R+I R ++N KR +++D
Sbjct: 119 VGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDE 178
Query: 230 SSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
SEI NG IP +G R V ++ ++ + ++ AV P+VI+ DEIGT +
Sbjct: 179 RSEIAACYNG-IPQMNVG--MRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEG 235
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNP 314
G+ ++AT HG +E L P
Sbjct: 236 LMMAYNSGVSIIATLHGRNVEELYRRP 262
>gi|451346346|ref|YP_007444977.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
gi|449850104|gb|AGF27096.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
Length = 307
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
Query: 165 GAIIGL------TCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIARVL 216
GA+ GL R+ R G A L + ++ + L IGPP GKTT++R++AR+
Sbjct: 101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKTTLLRDLARLS 160
Query: 217 ANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ K K+ IVD SEI G IP G RR+ V ++ + + L+ + + P
Sbjct: 161 STGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRVDVLDACPKAEGLMMMIRSMSP 218
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
VI++DEIG ++ A G+ ++ +AHG +++L+ PSL+ML
Sbjct: 219 DVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|225018840|ref|ZP_03708032.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
gi|224948400|gb|EEG29609.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
Length = 295
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 123 SDCQITVH-HIEHATSQVGDFAVDNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRA 177
S C +VH H E +RAG+ T +S +RN I + R+ R
Sbjct: 70 SLCGYSVHSHAEEIRQGFVTIQGGHRAGLCGTAVYSRGEVSNMRN----ISSINLRIARQ 125
Query: 178 VSGSAN-LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGN 236
+ GSAN L++ L L +G P GKTT++++I R + D+K + +VD+ E+
Sbjct: 126 IKGSANELIRRLNGKMGGTLLVGAPASGKTTLLKDIVRQMP-DHK--ITVVDSRGELAAC 182
Query: 237 -GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
+P +GNA V + + + ++ A+ + P +IV DEIG + +A A G
Sbjct: 183 VCGVPQNDVGNA---DVLDGWQKAEGMMLAIRSMAPDIIVCDEIGDRRDAQAVECCMNAG 239
Query: 296 IQLVATAHGVTIENLIMNPSLE--MLIGGVQNVTL 328
++L+ATAH ++E L + + +G +N+ L
Sbjct: 240 VKLIATAHAGSLEELTKRRHIMDILSLGAFENIVL 274
>gi|311069045|ref|YP_003973968.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|419820311|ref|ZP_14343922.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
gi|310869562|gb|ADP33037.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|388475463|gb|EIM12175.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
Length = 307
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 18/168 (10%)
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGI 244
++ + L IGPP GKTT++R++AR+ ++ K + IVD SEI G IP
Sbjct: 134 ENWLNTLIIGPPQTGKTTLLRDLARLSSSGINKIPAKKTGIVDERSEIAGCLRGIPQHQF 193
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G +R+ V ++ + + L+ + + P+VI++DEIG ++ A G+ ++ +AHG
Sbjct: 194 G--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRMEDSEAILEALHAGVSVIVSAHG 251
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
TI +L+ PSL++ L +E+A R V+ + RKGP T +
Sbjct: 252 WTISDLMKRPSLKL---------LWEEKAFDRYVELS--RRKGPGTVN 288
>gi|228910029|ref|ZP_04073849.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
gi|228849546|gb|EEM94380.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLAYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVKRPSLKAVL 267
>gi|30264268|ref|NP_846645.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47529711|ref|YP_021060.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187095|ref|YP_030347.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49480626|ref|YP_038254.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321579|ref|ZP_00394538.1| COG3854: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|165872983|ref|ZP_02217605.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167634531|ref|ZP_02392851.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|167638567|ref|ZP_02396843.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|170687461|ref|ZP_02878678.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|170709034|ref|ZP_02899464.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|177654810|ref|ZP_02936567.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190566110|ref|ZP_03019029.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218905329|ref|YP_002453163.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227816969|ref|YP_002816978.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228916829|ref|ZP_04080394.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935516|ref|ZP_04098334.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947910|ref|ZP_04110197.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229123713|ref|ZP_04252908.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|229602406|ref|YP_002868487.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|254683957|ref|ZP_05147817.1| stage III sporulation protein AA [Bacillus anthracis str.
CNEVA-9066]
gi|254721792|ref|ZP_05183581.1| stage III sporulation protein AA [Bacillus anthracis str. A1055]
gi|254736305|ref|ZP_05194011.1| stage III sporulation protein AA [Bacillus anthracis str. Western
North America USA6153]
gi|254741343|ref|ZP_05199030.1| stage III sporulation protein AA [Bacillus anthracis str. Kruger B]
gi|254754023|ref|ZP_05206058.1| stage III sporulation protein AA [Bacillus anthracis str. Vollum]
gi|254757894|ref|ZP_05209921.1| stage III sporulation protein AA [Bacillus anthracis str. Australia
94]
gi|386738084|ref|YP_006211265.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|421506452|ref|ZP_15953375.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|421638274|ref|ZP_16078870.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
gi|30258913|gb|AAP28131.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47504859|gb|AAT33535.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181022|gb|AAT56398.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49332182|gb|AAT62828.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164711266|gb|EDR16821.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167513415|gb|EDR88785.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|167529983|gb|EDR92718.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|170126061|gb|EDS94958.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|170668656|gb|EDT19402.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|172080471|gb|EDT65557.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190563029|gb|EDV16995.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218535151|gb|ACK87549.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227007321|gb|ACP17064.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228659848|gb|EEL15493.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|228811897|gb|EEM58231.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824268|gb|EEM70082.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843016|gb|EEM88099.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266814|gb|ACQ48451.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|384387936|gb|AFH85597.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|401823445|gb|EJT22592.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|403394700|gb|EJY91940.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T H ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIHLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|228929239|ref|ZP_04092266.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830529|gb|EEM76139.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T H ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIHLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423470413|ref|ZP_17447157.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
gi|423558227|ref|ZP_17534529.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|401191495|gb|EJQ98517.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|402436542|gb|EJV68572.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ MR V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMRQLVEGCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|228941354|ref|ZP_04103906.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974286|ref|ZP_04134855.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980879|ref|ZP_04141183.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|384188264|ref|YP_005574160.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676583|ref|YP_006928954.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|423385698|ref|ZP_17362954.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|423527946|ref|ZP_17504391.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|452200654|ref|YP_007480735.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778815|gb|EEM27078.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|228785336|gb|EEM33346.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818280|gb|EEM64353.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941973|gb|AEA17869.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401635754|gb|EJS53509.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|402451609|gb|EJV83428.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|409175712|gb|AFV20017.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|452106047|gb|AGG02987.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|423634977|ref|ZP_17610630.1| stage III sporulation protein AA [Bacillus cereus VD156]
gi|401278963|gb|EJR84893.1| stage III sporulation protein AA [Bacillus cereus VD156]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSSKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|410453700|ref|ZP_11307645.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
gi|409932914|gb|EKN69868.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A + + G + + IGPP GKTT++R+IA
Sbjct: 102 KVKAIRD----ISSFNIRIAREKVGIAEPIVPFIYKGIWMHTMIIGPPQTGKTTLLRDIA 157
Query: 214 RVLANDYKK------RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R+++ + +V +VD SEI G +P G+ R+ V ++ + + ++ +
Sbjct: 158 RIISTGNRAGGIQAYKVGVVDERSEIAGCVHGVPQLTFGH--RLDVLDACPKAEGMMMLI 215
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+++DEIG K +A A GI+L+ T HG +IE L PSL LI
Sbjct: 216 RSMSPDVLIVDEIGRKEDAEAILEAVHAGIKLIMTTHGTSIEELRKRPSLRDLI 269
>gi|206971017|ref|ZP_03231968.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218233741|ref|YP_002368996.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228922948|ref|ZP_04086242.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954479|ref|ZP_04116504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960461|ref|ZP_04122112.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047889|ref|ZP_04193465.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|229071700|ref|ZP_04204916.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|229081453|ref|ZP_04213953.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|229111668|ref|ZP_04241218.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|229129473|ref|ZP_04258444.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|229146768|ref|ZP_04275133.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|229152395|ref|ZP_04280587.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|229180473|ref|ZP_04307815.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|229192406|ref|ZP_04319369.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|296504681|ref|YP_003666381.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|423412001|ref|ZP_17389121.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|423426330|ref|ZP_17403361.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|423432213|ref|ZP_17409217.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|423437648|ref|ZP_17414629.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|423503117|ref|ZP_17479709.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|423582406|ref|ZP_17558517.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|423585324|ref|ZP_17561411.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|423630919|ref|ZP_17606666.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|423640723|ref|ZP_17616341.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|423650061|ref|ZP_17625631.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|423657139|ref|ZP_17632438.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|449091154|ref|YP_007423595.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206733789|gb|EDZ50960.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218161698|gb|ACK61690.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228590983|gb|EEK48839.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|228602897|gb|EEK60376.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|228631003|gb|EEK87640.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|228636596|gb|EEK93061.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|228654078|gb|EEL09945.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|228671803|gb|EEL27097.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|228701868|gb|EEL54354.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|228711431|gb|EEL63390.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|228723346|gb|EEL74715.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|228799225|gb|EEM46191.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805136|gb|EEM51730.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836719|gb|EEM82066.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296325733|gb|ADH08661.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|401104069|gb|EJQ12046.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|401111077|gb|EJQ18976.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|401116969|gb|EJQ24807.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|401120803|gb|EJQ28599.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|401213285|gb|EJR20026.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|401233967|gb|EJR40453.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|401264286|gb|EJR70398.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|401279784|gb|EJR85706.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|401282479|gb|EJR88378.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|401289882|gb|EJR95586.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|402459338|gb|EJV91075.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|449024911|gb|AGE80074.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 308
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|168186187|ref|ZP_02620822.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
gi|169295742|gb|EDS77875.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
Length = 298
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 32/266 (12%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+ +LP+EM++++ + +L E+ + + KPL + + D I I+ +
Sbjct: 6 VFYVLPKEMKMKLDSINNIDKLQEIRIKVN-KPLIIYLENKEIILDYIIKKEDIKIILQR 64
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ +R GI + I I+N I L R+ R V
Sbjct: 65 ISNYSIYAFEEEIKQGYITIRGGHRVGICGSCVIQDEAIKTIKN----IASLNIRICREV 120
Query: 179 SGSANLLQDLV---QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
G +N + + ++ + + I PP GKTT+IR+I+R L+ KK++ I+D SEI
Sbjct: 121 IGCSNKIMPYILKRENVFNTIIISPPKCGKTTLIRDISRNLS-IAKKKICIIDERSEIAS 179
Query: 236 NGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+ +P +G R + ++ ++ + +I A+ + P+VIV DEIGT + +
Sbjct: 180 CFEGVPQMDVG--IRTDILDNCVKSQGIIMAIRSMAPEVIVCDEIGTHRDVESIIMAMNS 237
Query: 295 GIQLVATAHGVTIENLIMNPSLEMLI 320
G+ L+ T HG IE+L P +I
Sbjct: 238 GVNLITTIHGFGIEDLYRRPVFNEVI 263
>gi|218899357|ref|YP_002447768.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228902712|ref|ZP_04066859.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|228967235|ref|ZP_04128271.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564392|ref|YP_006607116.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|423358766|ref|ZP_17336269.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|423561330|ref|ZP_17537606.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|434377318|ref|YP_006611962.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
gi|218541836|gb|ACK94230.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228792604|gb|EEM40170.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228856899|gb|EEN01412.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|401084638|gb|EJP92884.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|401201587|gb|EJR08452.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|401793044|gb|AFQ19083.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|401875875|gb|AFQ28042.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
Length = 308
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECEQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|429765574|ref|ZP_19297859.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
gi|429186025|gb|EKY26988.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
Length = 329
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 33/267 (12%)
Query: 72 FDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHH 131
+E + +LP + V + ++ + E+ + +G++ + G+ L D IT
Sbjct: 21 MKVEYEEIYRMLPSGINEEVKRYFKIEGVQEIRVKIGKQVMLTTSKGEKIL-DYTITNED 79
Query: 132 IEHATSQVGDFAV----------------DNRAGISRTLHRISA-IRNRKGAIIGLTCRV 174
+++ S++ ++++ +R G++ ++ +R K I L R+
Sbjct: 80 LKYMMSKISNYSLYAFEEEIKQGYITVKGGHRVGLAGECVMVNGEVRTIKN-ISSLNIRI 138
Query: 175 GRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDY------KKRVM 225
V GS+N + + + + L + PP GKTTI+R+IAR ++N K+V
Sbjct: 139 CNEVVGSSNRVMKYITNNNKVYNTLIVSPPKCGKTTILRDIARNISNGMYSLNLRGKKVT 198
Query: 226 IVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
IVD SEI G NG IP +G R V ++ ++ +I A+ + P+V++ DEIGT+
Sbjct: 199 IVDERSEIAGCYNG-IPQMNVG--VRTDVLDNCLKRIGMIMAIRSLSPEVLICDEIGTEG 255
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENL 310
+ A + G+ ++ T HG I ++
Sbjct: 256 DLEALNMAFNSGVNIIVTVHGNDINDI 282
>gi|30022276|ref|NP_833907.1| stage III sporulation protein AA [Bacillus cereus ATCC 14579]
gi|29897833|gb|AAP11108.1| Stage III sporulation protein AA [Bacillus cereus ATCC 14579]
Length = 316
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + E + L E+ + +GR PL G D T + ++
Sbjct: 4 VLEVLPKTMKYLIEECKQYDALEEIRVRIGR-PLECIAHGKVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|317132167|ref|YP_004091481.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
gi|315470146|gb|ADU26750.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
Length = 336
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDY--K 221
I G+ R+ R G+A+ LL + G + GPPG GKTT++R++AR L+N +
Sbjct: 130 ISGINLRIAREFRGAADGLLAAIGTSGRVRGTILAGPPGCGKTTVLRDLARQLSNGVSGR 189
Query: 222 KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
RV +VD EI +P IG V + + + +++AV P V++ DEIG
Sbjct: 190 CRVSVVDERGEIAATFKGVPQNDIGQC---DVLDGYPKGEGILQAVRCLSPDVVICDEIG 246
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ +A A + G+ ++A+AH +E L P + ++
Sbjct: 247 GETDARAVAASLNAGVAVIASAHAAKMEELFARPPMRAVL 286
>gi|220931461|ref|YP_002508369.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
gi|219992771|gb|ACL69374.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
Length = 316
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLLF-----IGPPGVGKTTIIREIARVLANDYKK-- 222
L R+ R + G N + + D + ++ + PP GKTT++R+I R+++N KK
Sbjct: 124 LNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPPLCGKTTLLRDIVRLISNGIKKYG 183
Query: 223 ----RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
+V +VD SEIGG NG IP IG+ R + ++ + K + V + P+VI +
Sbjct: 184 IPGKKVGVVDERSEIGGAYNG-IPGNRIGS--RTDLLDNCPKAKGISLLVRSMSPEVIAV 240
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG + + +A G+ L+ATAHG + L M P++ L+
Sbjct: 241 DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLM 284
>gi|238917027|ref|YP_002930544.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
gi|238872387|gb|ACR72097.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
Length = 289
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 173 RVGRAVSGSA-NLLQDLVQDGAS-LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTS 230
R+ + + G A N++ +L++DG + I PPG GKTT++R+I R L++ Y+K V+++D
Sbjct: 120 RIAKQMKGCADNIMDELLKDGLKHTIIISPPGFGKTTLLRDIIRQLSDIYRKNVVLIDER 179
Query: 231 SEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAA 288
EI NG +P IG R V + + + AV + PQV+ +DEIG + + A
Sbjct: 180 CEIAACVNG-VPCNDIGC--RTDVLDGCNKLTGVYMAVRSLSPQVVAMDEIGGEDDIKAV 236
Query: 289 STIAQRGIQLVATAHGVTI 307
+ G ++ TAHG I
Sbjct: 237 KYCIKSGCAVIGTAHGSGI 255
>gi|415885462|ref|ZP_11547390.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
gi|387591131|gb|EIJ83450.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
Length = 307
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A+ L + D L + IGPP GKTT++R+IA
Sbjct: 102 QVKAIRD----ISSFNIRIARERIGIADPLVPFLFDNGWLHTMIIGPPQTGKTTLLRDIA 157
Query: 214 RVLA--NDY----KKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R+++ ND +V IVD SEI G IP GN R+ V ++ + + ++ +
Sbjct: 158 RIISTGNDALGLSASKVGIVDERSEIAGCVKGIPQLTFGN--RIDVLDACPKAEGMMMMI 215
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+V+DEIG + +A+A GI+L+ T HG ++ + PSL+ ++
Sbjct: 216 RSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLLEIRKRPSLKKIL 269
>gi|423521947|ref|ZP_17498420.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
gi|401176609|gb|EJQ83804.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
Length = 308
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ MR V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKMMRQLVEGCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|167037501|ref|YP_001665079.1| ATPase AAA [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115915|ref|YP_004186074.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856335|gb|ABY94743.1| AAA ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929006|gb|ADV79691.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 332
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV---QDGAS 194
VG ++N G +TL IS G R+ + + G A +L+ L+ +D +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSKDVYN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V +VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -IRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|403386589|ref|ZP_10928646.1| stage III sporulation protein AA [Clostridium sp. JC122]
Length = 251
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 20/182 (10%)
Query: 147 RAGISRTL----HRISAIRNRKGAIIGLTCRVGR-AVSGSANLLQDLVQDGASL--LFIG 199
R GI T+ +++ I+N I+ + RV + ++ S ++ ++Q+G L + I
Sbjct: 32 RVGICGTVVTEDNKVKTIKN----IVSINIRVAKEIINCSKTIIPYILQEGEILNTIIIS 87
Query: 200 PPGVGKTTIIREIARVLAN-DYK-----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQV 252
PP GKTTI+R+I R+++N +Y K V ++D SEI IP IG R V
Sbjct: 88 PPKCGKTTILRDICRIVSNGNYTLNLKGKNVSVIDERSEIAACFKGIPQMNIG--ERTDV 145
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+S + + +I A+ + P+V++ DEIGT + + G++L+ T HG I++L
Sbjct: 146 LDSCPKSEGIIMAIRSMSPEVVICDEIGTYKDMDSIIAALNSGVKLITTIHGFDIDDLYK 205
Query: 313 NP 314
P
Sbjct: 206 RP 207
>gi|289578279|ref|YP_003476906.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
gi|289527992|gb|ADD02344.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
Length = 332
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGA-IIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
VG ++N G +TL IS R IIG+ + + + ++N + ++ L
Sbjct: 111 VGKCVLEN--GYIKTLKNISGYNYRISKDIIGVAEEILKYLISTSNGVHNI-------LI 161
Query: 198 IGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGNARR 249
I PP GKTT++R+IAR ++N D+ K+V IVD SEI G NG IP +G R
Sbjct: 162 ISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNG-IPQLDVG--IR 218
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
V + + +I + + PQV+V DEIG K + A + G++++ T H IE+
Sbjct: 219 TDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHANDIED 278
Query: 310 LIMNPSLEMLI 320
L+ P L+ +I
Sbjct: 279 LMKKPILKDVI 289
>gi|359412675|ref|ZP_09205140.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
gi|357171559|gb|EHI99733.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
Length = 309
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Query: 152 RTLHRISAIRNRKG-AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIR 210
+T+ IS+I R +IG + +V + ++ S + +V I PP GKTTI+R
Sbjct: 108 KTIRNISSINVRICREVIGCSDKVMKYIASSHRIYNTIV--------ISPPKCGKTTILR 159
Query: 211 EIARVLANDYK------KRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
+IAR ++N ++V+++D SEIG + +P +G R V ++ ++ + LI
Sbjct: 160 DIARNISNGVSSLGLNGRKVVVIDERSEIGACHFGVPQSDLG--IRTDVLDNCLKREGLI 217
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
A+ + P+V++ DEIGTK + A G+ ++ T HG TIE+L
Sbjct: 218 MAIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIEDL 264
>gi|229031842|ref|ZP_04187830.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
gi|228729460|gb|EEL80449.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
Length = 308
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYVVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ N +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASNIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423400957|ref|ZP_17378130.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|423478338|ref|ZP_17455053.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
gi|401653947|gb|EJS71490.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|402428500|gb|EJV60597.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
Length = 308
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYVVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|297544559|ref|YP_003676861.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842334|gb|ADH60850.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 332
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGA-IIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
VG ++N G +TL IS R IIG+ + + + ++N + ++ L
Sbjct: 111 VGKCVLEN--GYIKTLKNISGYNYRISKDIIGVAEEILKYLISTSNGVYNI-------LI 161
Query: 198 IGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGNARR 249
I PP GKTT++R+IAR ++N D+ K+V IVD SEI G NG IP +G R
Sbjct: 162 ISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNG-IPQLDVG--IR 218
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
V + + +I + + PQV+V DEIG K + A + G++++ T H IE+
Sbjct: 219 TDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHANDIED 278
Query: 310 LIMNPSLEMLI 320
L+ P L+ +I
Sbjct: 279 LMKKPILKDVI 289
>gi|229174870|ref|ZP_04302390.1| Stage III sporulation protein AA [Bacillus cereus MM3]
gi|228608538|gb|EEK65840.1| Stage III sporulation protein AA [Bacillus cereus MM3]
Length = 308
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|403744996|ref|ZP_10954024.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121651|gb|EJY55928.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 347
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 48/340 (14%)
Query: 42 FFIEEFSGFRSKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELI 101
F +E G+ + + R+ +++D EL EE+R+R+ + EL +
Sbjct: 24 FRPQETGGWNQALAVLPVDLQRLLLALDDTILAEL--------EEVRLRIGQPIELRFGV 75
Query: 102 EVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVD-------------NRA 148
L P LS Q + H+ +Q +AV+ +R
Sbjct: 76 NSQYLKQGGGLTLMPPAAAVLS--QAALEHVMQQVTQFSLYAVEEELRKGFITLPGGHRI 133
Query: 149 GIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA-----SLLFIGPPG 202
G++ R + IR+ + +I L R+ RA G A L+ + D S L I PP
Sbjct: 134 GVAGRIVTDGGHIRSIR-SISSLNIRIARAHPGMATPLRPWLADRGDGHPLSTLVISPPQ 192
Query: 203 VGKTTIIREIARVLANDYKKR------VMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE 256
GKTT++R+IAR + + R V+I+D SEI G + P R V +
Sbjct: 193 CGKTTLVRDIARQWSENLVTRRRSPSKVVIIDERSEIAGMFE-GRPQFALGPRTDVLDGC 251
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + L+ A+ + P ++V DEIG + A A G+ ++ TAH ++ + P +
Sbjct: 252 PKAEGLLMAIRSLSPDIVVTDEIGKHGDVEAILEAANAGVAVITTAHASSLASWRRRPHM 311
Query: 317 EMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVE 356
E L +AH + R+GP T C ++
Sbjct: 312 EELF-----------QAHAFARYIILSRRRGPGTIECVLD 340
>gi|163941952|ref|YP_001646836.1| sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|423518898|ref|ZP_17495379.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|423669780|ref|ZP_17644809.1| stage III sporulation protein AA [Bacillus cereus VDM034]
gi|163864149|gb|ABY45208.1| Sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|401159953|gb|EJQ67332.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|401298907|gb|EJS04507.1| stage III sporulation protein AA [Bacillus cereus VDM034]
Length = 308
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ MR V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKAMRQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|52141303|ref|YP_085526.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118479384|ref|YP_896535.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196046314|ref|ZP_03113540.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225866175|ref|YP_002751553.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|229186436|ref|ZP_04313600.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|301055686|ref|YP_003793897.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|376268091|ref|YP_005120803.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
gi|51974772|gb|AAU16322.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118418609|gb|ABK87028.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196022784|gb|EDX61465.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225790306|gb|ACO30523.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|228597063|gb|EEK54719.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|300377855|gb|ADK06759.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|364513891|gb|AEW57290.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
Length = 308
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|56964243|ref|YP_175974.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
gi|56910486|dbj|BAD65013.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
Length = 309
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 111 PLARFPSGDFSLSDCQITVHHI----EHATSQVGDFAVDNRAGIS-RTLHRISAIRNRKG 165
PL RF D S Q++ + + E A +R G++ +T+ A++ +
Sbjct: 53 PLYRFSVADASYVLNQLSQYSLYAFEEELQKGYITVAGGHRVGLAGKTVLENGAVQTIR- 111
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQD-----GASLLFIGPPGVGKTTIIREIARVLANDY 220
+ R+ R G+A + D + D + L IGPP GKTT++R++AR+++
Sbjct: 112 PVSSFNVRIARQKIGAAEKVIDKLYDRQTRSWQNALLIGPPQTGKTTVLRDVARIVSTGS 171
Query: 221 KK------RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
KK +V IVD SEI G +P +G R+ V + + + ++ + + P V
Sbjct: 172 KKNHIPSCKVGIVDERSEIAGCVAGVPQHELGV--RVDVLDGCPKAEGMMMLIRSMSPDV 229
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+++DEIG + + A G+ L+ATAHG T+E++ P + L
Sbjct: 230 LIVDEIGREEDVKAILEARHAGVSLIATAHGHTLEDVAKRPVFKGL 275
>gi|229135016|ref|ZP_04263821.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
gi|228648401|gb|EEL04431.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
Length = 308
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ MR V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKAMRQLVECCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|196041563|ref|ZP_03108855.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
gi|196027551|gb|EDX66166.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
Length = 308
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQCDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAILEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|317498108|ref|ZP_07956410.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894585|gb|EFV16765.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
Length = 315
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 146 NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFI 198
+R GI T+ ++ IR+ I GL RV V G A++L L L I
Sbjct: 108 HRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTLII 163
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNS 255
PPG GKTT++R++ R ++ D + V +VD SEIG + G+ + V ++
Sbjct: 164 SPPGCGKTTLLRDMIRKIS-DEGQTVGVVDERSEIGA----CYQGVAQNDLGIQTDVMDA 218
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + + + P VI +DEIG+K + A A RG ++ATAHG E+L NP
Sbjct: 219 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 278
Query: 316 LEMLI 320
+ +I
Sbjct: 279 MREII 283
>gi|423550060|ref|ZP_17526387.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
gi|401189676|gb|EJQ96726.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
Length = 308
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423457622|ref|ZP_17434419.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
gi|401148006|gb|EJQ55499.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
Length = 308
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKRLVESCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|392955288|ref|ZP_10320831.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
gi|391878760|gb|EIT87337.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
Length = 308
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 16/173 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG---ASLLFIGPPGVGKTTIIREIA 213
+ AIR+ I RV R V GSA L+ + D + L IG P GKTT++R++A
Sbjct: 107 VKAIRD----IGSFNIRVARQVIGSAEPLRAALCDNNRWLNTLIIGAPQTGKTTLLRDLA 162
Query: 214 RVLA-NDYKKR-----VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R+++ D + R V IVD SEI G+ IP +G+ R+ V ++ + + ++ +
Sbjct: 163 RLISVGDEQTRISSRKVGIVDERSEIAGSVRGIPQFELGS--RVDVLDACPKAEGMMMLI 220
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+ P+++++DEIG K + A G+ L+ATAHG +++ + P+LE L
Sbjct: 221 RSMSPEILIVDEIGRKEDVEAMIEAMHAGVGLIATAHGYSLQEAMKRPALEAL 273
>gi|404489858|ref|YP_006713964.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52348854|gb|AAU41488.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 309
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 196 LFIGPPGVGKTTIIREIARVLA----NDYKKRVMIVDTSSEIGG--NGDIPHPGIGNARR 249
L IGPP GKTT++R++AR+++ N K+V IVD SEI G NG IP +G+ R
Sbjct: 142 LIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNG-IPQYRLGD--R 198
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
+ ++ + + L+ + + P+V++ DEIG +A A G+ ++ +AHG T +
Sbjct: 199 ADILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYAD 258
Query: 310 LIMNPSLEML 319
L PSL+ML
Sbjct: 259 LARRPSLKML 268
>gi|402298077|ref|ZP_10817801.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
gi|401726721|gb|EJS99937.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
Length = 310
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 37/275 (13%)
Query: 79 LLALLPEEMRIRVSEHPE--LYELIEVVMDLGR--------KPLARFPSGDFSL-----S 123
++A+LPE +R + P + ++ E+ + +GR +P +P D +
Sbjct: 5 IMAVLPESIRTLIKSMPSSLIDKVEEIRVRVGRPLEVIAEGRPF--YPENDNHMYRIRPE 62
Query: 124 DCQITVHHIEHATSQVGDFAVDNRAGISRTLHRIS---AIRNRKGAIIGL------TCRV 174
D Q ++ + H + + + R HR+ + KG + L RV
Sbjct: 63 DGQFILNQLSHYSFYAFEEELKRGYITIRGGHRVGLSGKVILEKGQVKTLKEISSYNIRV 122
Query: 175 GRAVSGSANLL--QDLVQDGASLLFIGPPGVGKTTIIREIARVLA-NDYKK-----RVMI 226
R G A+ L Q ++ + L IGPP GKTT++R+IAR+++ D KK +V I
Sbjct: 123 ARQTIGVADKLISQIFEKEWLNTLIIGPPQTGKTTLLRDIARLISEGDRKKGIQPLKVGI 182
Query: 227 VDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEA 285
VD SEI + +P +G+ R+ V + + + ++ + P VI++DEIG + +
Sbjct: 183 VDERSEIAASVKGVPQHRLGD--RVDVLDGCPKVEGMMMLIRTMSPDVIIVDEIGREEDR 240
Query: 286 MAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+A G++++ TAHG ++ +L P+L+ LI
Sbjct: 241 IAIEEAMYAGVKVITTAHGHSVHDLKRRPALKGLI 275
>gi|291559558|emb|CBL38358.1| stage III sporulation protein AA [butyrate-producing bacterium
SSC/2]
Length = 308
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 146 NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFI 198
+R GI T+ ++ IR+ I GL RV V G A++L L L I
Sbjct: 101 HRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTLII 156
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNS 255
PPG GKTT++R++ R ++ D + V +VD SEIG + G+ + V ++
Sbjct: 157 SPPGCGKTTLLRDMIRKIS-DEGQTVGVVDERSEIGA----CYQGVAQNDLGIQTDVMDA 211
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + + + P VI +DEIG+K + A A RG ++ATAHG E+L NP
Sbjct: 212 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 271
Query: 316 LEMLI 320
+ +I
Sbjct: 272 MREII 276
>gi|52080976|ref|YP_079767.1| hypothetical protein BL01540 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645066|ref|ZP_07999299.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|423682948|ref|ZP_17657787.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
gi|52004187|gb|AAU24129.1| SpoIIIAA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392875|gb|EFV73669.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|383439722|gb|EID47497.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
Length = 307
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 196 LFIGPPGVGKTTIIREIARVLA----NDYKKRVMIVDTSSEIGG--NGDIPHPGIGNARR 249
L IGPP GKTT++R++AR+++ N K+V IVD SEI G NG IP +G+ R
Sbjct: 140 LIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNG-IPQYRLGD--R 196
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
+ ++ + + L+ + + P+V++ DEIG +A A G+ ++ +AHG T +
Sbjct: 197 ADILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYAD 256
Query: 310 LIMNPSLEML 319
L PSL+ML
Sbjct: 257 LARRPSLKML 266
>gi|167767112|ref|ZP_02439165.1| hypothetical protein CLOSS21_01630 [Clostridium sp. SS2/1]
gi|167711087|gb|EDS21666.1| stage III sporulation protein AA [Clostridium sp. SS2/1]
Length = 342
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 146 NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFI 198
+R GI T+ ++ IR+ I GL RV V G A++L L L I
Sbjct: 135 HRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTLII 190
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNS 255
PPG GKTT++R++ R ++ D + V +VD SEIG + G+ + V ++
Sbjct: 191 SPPGCGKTTLLRDMIRKIS-DEGQTVGVVDERSEIGA----CYQGVAQNDLGIQTDVMDA 245
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + + + P VI +DEIG+K + A A RG ++ATAHG E+L NP
Sbjct: 246 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 305
Query: 316 LEMLI 320
+ +I
Sbjct: 306 MREII 310
>gi|423452500|ref|ZP_17429353.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
gi|401140138|gb|EJQ47695.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
Length = 308
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYETRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|423612416|ref|ZP_17588277.1| stage III sporulation protein AA [Bacillus cereus VD107]
gi|401246005|gb|EJR52357.1| stage III sporulation protein AA [Bacillus cereus VD107]
Length = 308
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDVLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|228987384|ref|ZP_04147504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229093252|ref|ZP_04224370.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228690226|gb|EEL44020.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228772356|gb|EEM20802.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 308
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKWCDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|154483666|ref|ZP_02026114.1| hypothetical protein EUBVEN_01370 [Eubacterium ventriosum ATCC
27560]
gi|149735576|gb|EDM51462.1| putative stage III sporulation protein AA [Eubacterium ventriosum
ATCC 27560]
Length = 283
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 179 SGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG- 237
+ L+ +V++ +LL I PPG+GKTT++R I R +N V +VD +EIGG+
Sbjct: 126 NAGCELVNKIVEEKENLLIISPPGLGKTTLLRNIIRGYSNLKGINVTVVDERNEIGGSYR 185
Query: 238 DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQ 297
+P +G R V + ++ ++ A+ + P+VI +DEIG+ + A G+
Sbjct: 186 GVPMINLG--LRTDVISDCTKYSGIVMAIRSMAPKVIAVDEIGSGADFKAIEYAVNSGVS 243
Query: 298 LVATAHG 304
+VAT HG
Sbjct: 244 VVATIHG 250
>gi|410722781|ref|ZP_11362034.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
gi|410603777|gb|EKQ58203.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
Length = 306
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I + R+ R V G+++ + + + + + I PP GKTTI+R+IA
Sbjct: 104 VKTIRN----ISSVNVRICREVIGASDKVMKYIASKSRIYNTIIISPPKCGKTTILRDIA 159
Query: 214 RVLANDYK------KRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R ++N K+V++VD SEIG + +P +G R V ++ ++ + LI A+
Sbjct: 160 RNISNGMSILGLNGKKVVVVDERSEIGACHLGVPQTDLG--LRTDVLDNCLKREGLIMAI 217
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ P+V++ DEIGT+ + + G+ ++ T HG TIE+L
Sbjct: 218 RSLSPEVLICDEIGTQGDIESLIMAFNSGVNIITTIHGFTIEDL 261
>gi|229157792|ref|ZP_04285867.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
gi|228625749|gb|EEK82501.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
Length = 308
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKWCDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423395504|ref|ZP_17372705.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|423406380|ref|ZP_17383529.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
gi|401654915|gb|EJS72454.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|401660374|gb|EJS77856.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
Length = 308
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 79 LLALLPEEMRIRVSEHPELYE-LIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
+L +LP+ M+ R+ E + Y+ L E+ + +GR PL G+ D T + +
Sbjct: 4 VLEVLPKTMK-RLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIYLLN 61
Query: 138 QVGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGS 181
++ F++ R ++ R HRI + K A+ R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGI 121
Query: 182 ANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEI 233
A L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASQIPSCKVGIVDERSEI 181
Query: 234 GGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIA 292
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 293 QRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 240 HAGVQLFISAHGFSYEDVVKRPSLKAVL 267
>gi|423483786|ref|ZP_17460476.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
gi|401141337|gb|EJQ48892.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
Length = 308
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSEVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSRGVSASKISSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|345017586|ref|YP_004819939.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032929|gb|AEM78655.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 332
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV---QDGAS 194
VG ++N G +TL IS G R+ + + G A +L+ L+ +D +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSKDVYN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -IRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|308805324|ref|XP_003079974.1| sporulation protein-related (ISS) [Ostreococcus tauri]
gi|116058431|emb|CAL53620.1| sporulation protein-related (ISS), partial [Ostreococcus tauri]
Length = 173
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILS 378
L+GGVQ VTLGD+EA RG QK++LER+GP TF +E+ + ++ V H++ +VD +LS
Sbjct: 2 LVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHER-DMWVAHNVAESVDEVLS 60
Query: 379 GRIPNVEIRRMQHDGSKETVEKEFF 403
G P V++R ++ +V + +
Sbjct: 61 GARPVVQLRTRNAQTNEVSVHRTVY 85
>gi|187935302|ref|YP_001886604.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
gi|187723455|gb|ACD24676.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
Length = 306
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I + R R V G +N + + G + + I PP GKTTI+R+I+
Sbjct: 104 VKTIRN----ISSINVRFCREVIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDIS 159
Query: 214 RVLANDYK------KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R ++N K K+V ++D SEIG +P +G R + ++ ++ + +I ++
Sbjct: 160 RNISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLG--IRTDILDNCLKKEGMIMSI 217
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P+V++ DEIGTK + A G+ ++ + HG TI+++ + LI
Sbjct: 218 RSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|384044940|ref|YP_005492957.1| stage III sporulation protein AA [Bacillus megaterium WSH-002]
gi|345442631|gb|AEN87648.1| Stage III sporulation protein AA [Bacillus megaterium WSH-002]
Length = 315
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQD--GASLLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ + G +N L + + S + IGPP GKTT+IR++ARV++ ++
Sbjct: 113 FNIRIAKQKIGISNRLIPFLYNRYWQSTVIIGPPQTGKTTMIRDLARVISTGIERSKIPP 172
Query: 223 -RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
+V IVD SEI G +P G+ RM + +S + + ++ + + P V+++DE+G
Sbjct: 173 FKVGIVDERSEIAGAVKGVPQHTFGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVG 230
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++ + A G++++ T HG I++L+ P+L+ L+
Sbjct: 231 SEEDCKAVLEAVNAGVRVIMTVHGYDIDDLMKRPTLQALM 270
>gi|150016566|ref|YP_001308820.1| sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
gi|149903031|gb|ABR33864.1| Sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
Length = 306
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I + R+ R V G +N + + + + I PP GKTTI+R+IA
Sbjct: 104 VKTIRN----ISSVNIRICREVIGCSNKVMKYIISAYKVYNTIIISPPKCGKTTILRDIA 159
Query: 214 RVLANDY------KKRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R +++ K+V ++D SEIG IP +G R V ++ ++ + LI A+
Sbjct: 160 RNISSGMPSLGIAGKKVAVIDERSEIGACYFGIPQSDLG--IRTDVLDNCLKREGLIMAI 217
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ P+V++ DEIGTK + A G+ ++ T HG TIE+L
Sbjct: 218 RSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIEDL 261
>gi|300854289|ref|YP_003779273.1| stage III sporulation protein AA [Clostridium ljungdahlii DSM
13528]
gi|300434404|gb|ADK14171.1| predicted stage III sporulation protein AA [Clostridium ljungdahlii
DSM 13528]
Length = 308
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLANDYK-- 221
I L R+ R V ++ + + G ++ I PP GKTT++R+I R ++ K
Sbjct: 112 IASLNIRICREVVNCSDSIMKFISKGNEIINTIIISPPKCGKTTLVRDIVRNISQGVKNI 171
Query: 222 ----KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
K+V ++D SEIG NG +P +G R + + + + +I A+ + P+VIV
Sbjct: 172 GLTGKKVSVIDERSEIGACFNG-VPQLNVG--VRTDILDGCPKSQGIIMAIRSMSPEVIV 228
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + + T GI L+ T HG IE+L P + ++
Sbjct: 229 CDEIGTYRDMDSIVTALNSGISLIITIHGYGIEDLYNRPVFKEIV 273
>gi|294501214|ref|YP_003564914.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|295706561|ref|YP_003599636.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
gi|294351151|gb|ADE71480.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|294804220|gb|ADF41286.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
Length = 315
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQD--GASLLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ + G +N L + + S + IGPP GKTT+IR++ARV++ ++
Sbjct: 113 FNIRIAKQKIGISNQLIPFLYNRYWQSTVIIGPPQTGKTTMIRDLARVISTGIERSKIPP 172
Query: 223 -RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
+V IVD SEI G +P G+ RM + +S + + ++ + + P V+++DE+G
Sbjct: 173 FKVGIVDERSEIAGAVKGVPQHTFGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVG 230
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++ + A G++++ T HG I++L+ P+L+ L+
Sbjct: 231 SEEDCKAVLEAVNAGVRVIMTVHGYDIDDLMKRPTLQALM 270
>gi|229013411|ref|ZP_04170548.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|423368248|ref|ZP_17345680.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|423512308|ref|ZP_17488839.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
gi|423660956|ref|ZP_17636125.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|423674015|ref|ZP_17648954.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|228747823|gb|EEL97689.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|401080999|gb|EJP89279.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|401300997|gb|EJS06586.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|401309566|gb|EJS14899.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|402449279|gb|EJV81116.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
Length = 308
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|326390193|ref|ZP_08211754.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
gi|325993841|gb|EGD52272.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
Length = 332
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV---QDGAS 194
VG ++N G +TL IS G R+ + + G A +L+ L+ +D +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSKDVYN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -IRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|423489380|ref|ZP_17466062.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
gi|423495103|ref|ZP_17471747.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|423498103|ref|ZP_17474720.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|423598486|ref|ZP_17574486.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|401151196|gb|EJQ58648.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|401161390|gb|EJQ68757.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|401236756|gb|EJR43213.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|402431616|gb|EJV63680.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGISASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|423448777|ref|ZP_17425656.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
gi|401129371|gb|EJQ37054.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKMMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVCFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|47569452|ref|ZP_00240133.1| stage III sporulation protein AA [Bacillus cereus G9241]
gi|47553867|gb|EAL12237.1| stage III sporulation protein AA [Bacillus cereus G9241]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKWCDALEEIRVRIGR-PLECIAHGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYETRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423604153|ref|ZP_17580046.1| stage III sporulation protein AA [Bacillus cereus VD102]
gi|401245839|gb|EJR52192.1| stage III sporulation protein AA [Bacillus cereus VD102]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVENCKQYDALEEIRVRIGR-PLECIAQGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|229104823|ref|ZP_04235483.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
gi|228678540|gb|EEL32757.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|398304497|ref|ZP_10508083.1| stage III sporulation protein AA [Bacillus vallismortis DV1-F-3]
Length = 307
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPELYELIEV---------VMDLGRKPLARFPSGDFSLSDCQITVHHI 132
+LPE M+ +SE PE ++ +E+ ++L RK F S + D + + +
Sbjct: 7 VLPESMKNALSEMPE-HQWLEIEEIRIRVNRPVELIRKGQPVFLSYSGTAEDAHLILSRL 65
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN- 236
LL L QD + L IGPP GKTT++R++AR+ + + IVD SEI G
Sbjct: 126 PLLPYLFQDSWLNTLIIGPPQTGKTTLLRDLARLSSTGKNGMSPAKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+VI++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTIS 288
>gi|407706722|ref|YP_006830307.1| stage IV sporulation YqfD [Bacillus thuringiensis MC28]
gi|407384407|gb|AFU14908.1| Stage III sporulation protein AA [Bacillus thuringiensis MC28]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|332981353|ref|YP_004462794.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
gi|332699031|gb|AEE95972.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
Length = 332
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 16/174 (9%)
Query: 158 SAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIA 213
SAIR K I GL R+GR + G A+ + + D + L + PP GKTT++R+IA
Sbjct: 126 SAIRTIK-YISGLNVRIGRELIGVADRVMRFIIDSDAKPLHTLVVSPPQCGKTTLLRDIA 184
Query: 214 RVLANDYK----KRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAV 266
R L++ ++V+IVD SE+ G+ + GI R V ++ + ++ A+
Sbjct: 185 RQLSDGCSACIPRKVVIVDERSELAGS----YMGIAQNDVGIRTDVLDACPKAAGIMMAI 240
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
P VIV DEIG + + A GI +VA+AHG I ++ P L+ L+
Sbjct: 241 RAMSPDVIVTDEIGRQEDVYAIEEALNSGIIVVASAHGKDISDISNRPILKQLM 294
>gi|182417972|ref|ZP_02949280.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237668875|ref|ZP_04528859.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378143|gb|EDT75678.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237657223|gb|EEP54779.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 196 LFIGPPGVGKTTIIREIARVLAND------YKKRVMIVDTSSEIGG-NGDIPHPGIGNAR 248
+ I PP GKTTI+R+IAR ++N Y ++V ++D SEIG + IP +G
Sbjct: 144 IIISPPKCGKTTILRDIARNISNGMNSIGLYGRKVAVIDERSEIGACHFGIPQNDLG--M 201
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + ++ ++ + +I A+ + P++++ DEIGTK + A G+ ++ + HG TIE
Sbjct: 202 RTDILDNCLKKEGMIMAIRSLSPEILICDEIGTKGDVEALLMAFNSGVNIITSIHGFTIE 261
Query: 309 NL 310
+L
Sbjct: 262 DL 263
>gi|423622719|ref|ZP_17598497.1| stage III sporulation protein AA [Bacillus cereus VD148]
gi|401260839|gb|EJR67007.1| stage III sporulation protein AA [Bacillus cereus VD148]
Length = 308
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKMMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAV----------------DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSA 182
+ F++ +R G++ + +I + R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSIVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|206976251|ref|ZP_03237159.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217961683|ref|YP_002340253.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|222097640|ref|YP_002531697.1| stage III sporulation protein aa [Bacillus cereus Q1]
gi|229140927|ref|ZP_04269471.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|229198320|ref|ZP_04325027.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|375286201|ref|YP_005106640.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|402555673|ref|YP_006596944.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
gi|423354691|ref|ZP_17332316.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|423373988|ref|ZP_17351327.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|423566844|ref|ZP_17543091.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|423574120|ref|ZP_17550239.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|206745447|gb|EDZ56846.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217064201|gb|ACJ78451.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|221241698|gb|ACM14408.1| stage III sporulation protein AA [Bacillus cereus Q1]
gi|228585199|gb|EEK43310.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|228642503|gb|EEK98790.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|358354728|dbj|BAL19900.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|401086239|gb|EJP94466.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|401094803|gb|EJQ02873.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|401212689|gb|EJR19432.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|401215359|gb|EJR22076.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|401796883|gb|AFQ10742.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
Length = 308
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVENCKQYDALEEIRVRIGR-PLECIAQGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|153938479|ref|YP_001391217.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|384462236|ref|YP_005674831.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
gi|152934375|gb|ABS39873.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|295319253|gb|ADF99630.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
Length = 307
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDF-SLSDCQITVHHIEHATS 137
+L +LP + + + EL +L E+ + +G KP+ F G+ L+ ++ I+
Sbjct: 6 ILNILPSHISRLICDLDELDKLQEIRLKIG-KPIF-FQIGNIEKLASYEVKREDIKSIVQ 63
Query: 138 QVGDFAV----------------DNRAGIS-RTL---HRISAIRNRKGAIIGLTCRVGRA 177
++ ++++ +R GI R + ++ IR+ I L R+ R
Sbjct: 64 RMSNYSIYSFEEEIKQGYLTIKGGHRVGICGRCVIDEGKVKTIRD----ISSLNIRICRE 119
Query: 178 VSGSANLLQD-LVQDGASL--LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVD 228
+ ++ L+ +V++G L + I PP GKTTIIR+I++ ++ N K+V ++D
Sbjct: 120 IYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVID 179
Query: 229 TSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAM 286
SEI G NG +P +G R V ++ + + ++ A+ + P+VI+ DEIGT +
Sbjct: 180 ERSEIAGSYNG-VPQLDVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVE 236
Query: 287 AASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ G+ L+ T HG +EN+ P + ++
Sbjct: 237 SILIALNSGVSLITTIHGFGVENIYNRPVFKEIV 270
>gi|167040163|ref|YP_001663148.1| ATPase AAA [Thermoanaerobacter sp. X514]
gi|300914246|ref|ZP_07131562.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307724518|ref|YP_003904269.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
gi|166854403|gb|ABY92812.1| AAA ATPase [Thermoanaerobacter sp. X514]
gi|300889181|gb|EFK84327.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307581579|gb|ADN54978.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
Length = 332
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV--QDGA-S 194
VG ++N G +TL IS G R+ + + G A +L+ L+ +G +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSNGVHN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V +VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -LRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|229168937|ref|ZP_04296654.1| Stage III sporulation protein AA [Bacillus cereus AH621]
gi|228614529|gb|EEK71637.1| Stage III sporulation protein AA [Bacillus cereus AH621]
Length = 308
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDTIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|229163141|ref|ZP_04291096.1| Stage III sporulation protein AA [Bacillus cereus R309803]
gi|228620204|gb|EEK77075.1| Stage III sporulation protein AA [Bacillus cereus R309803]
Length = 308
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +G KPL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIG-KPLECIAHGEVFFYDYITTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 N-LLQDLVQD-GASLLFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
LL L ++ + + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYEERWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + E+++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYEDVVKRPSLQAVL 267
>gi|423417881|ref|ZP_17394970.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
gi|401107052|gb|EJQ15009.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
Length = 308
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIATAEDALYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|256752877|ref|ZP_05493715.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748254|gb|EEU61320.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 332
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV--QDGA-S 194
VG ++N G +TL IS G R+ + + G A +L+ L+ +G +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSNGVHN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V +VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -LRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|403238245|ref|ZP_10916831.1| stage III sporulation protein AA [Bacillus sp. 10403023]
Length = 307
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 15/173 (8%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD--GASLLFIGPPGVGKTTIIREIAR 214
+ AIR+ + R+ + G A L + D + + IGPP GKTT++R++AR
Sbjct: 103 VKAIRD----VTSFNIRIAKQKIGVAAPLAPYLYDTHWKNTIIIGPPQTGKTTLLRDLAR 158
Query: 215 VLANDYKKR------VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVE 267
+++ + + V IVD SEI G +P +G R+ V ++ + + ++ +
Sbjct: 159 MISTGIQSKSIPAMKVGIVDERSEIAGCVKGVPQASLGP--RVDVLDACPKAEGMMMMIR 216
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+++DEIG + +++A G+ L+ TAHG I +L+ PSLE +I
Sbjct: 217 SMSPDVLIVDEIGREEDSLAIMEAVNAGVSLIVTAHGHQISDLLKRPSLEKII 269
>gi|429762047|ref|ZP_19294454.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
gi|429182593|gb|EKY23691.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
Length = 345
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 146 NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFI 198
+R GI T+ ++ IR+ I GL RV V G A+ L L L I
Sbjct: 138 HRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADTLYSRCTRMGKLIPTLII 193
Query: 199 GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNS 255
PPG GKTT++R++ R ++ D + V +VD SEIG + G+ + V ++
Sbjct: 194 SPPGCGKTTLLRDMIRKIS-DEGQTVGVVDERSEIGA----CYQGVAQNDLGIQTDVMDA 248
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + + + P VI +DEIG+K + A A RG ++ATAHG E+L NP
Sbjct: 249 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 308
Query: 316 LEMLI 320
+ +I
Sbjct: 309 MREII 313
>gi|229075902|ref|ZP_04208878.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|229098666|ref|ZP_04229606.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|229117691|ref|ZP_04247061.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|423377947|ref|ZP_17355231.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|423441067|ref|ZP_17417973.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|423464141|ref|ZP_17440909.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|423533483|ref|ZP_17509901.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
gi|423547498|ref|ZP_17523856.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|228665783|gb|EEL21255.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|228684745|gb|EEL38683.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|228707217|gb|EEL59414.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|401179219|gb|EJQ86392.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|401636213|gb|EJS53967.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|402417728|gb|EJV50028.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|402420408|gb|EJV52679.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|402463702|gb|EJV95402.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
Length = 308
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKMMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|423591808|ref|ZP_17567839.1| stage III sporulation protein AA [Bacillus cereus VD048]
gi|401231941|gb|EJR38443.1| stage III sporulation protein AA [Bacillus cereus VD048]
Length = 308
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|399889154|ref|ZP_10775031.1| stage III sporulation protein AA [Clostridium arbusti SL206]
Length = 306
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 39/268 (14%)
Query: 74 IELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLA-----RFPSGDFSLSDCQIT 128
I + +L +LP+ ++ + EL +L E+ + + KPL R G+++++ I+
Sbjct: 2 INIKNILDVLPQNIKNITATLKELEKLQEIRLKV-NKPLIFQLGEREVIGNYNVTHEDIS 60
Query: 129 ----------VHHIEHATSQVGDFAVD--NRAGISRTL----HRISAIRNRKGAIIGLTC 172
++ IE Q G + +R GI +R+ I++ I L
Sbjct: 61 NILKRMSNYSIYSIEDEIKQ-GYITIKGGHRVGICGNCIIENNRVKTIKD----ISSLNI 115
Query: 173 RVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLANDYK------KR 223
R+ R + G +N + + ++L I PP GKTT+IR+I R ++N K
Sbjct: 116 RICREIIGCSNKIMPWILKDKNILNTIIISPPKCGKTTLIRDITRNISNGMDNTLLKGKN 175
Query: 224 VMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
V ++D SEI + D IP +G R V ++ + + ++ A+ + P VIV DEIGT
Sbjct: 176 VCVIDERSEICASSDGIPQLNVG--IRTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTY 233
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENL 310
+ + G+ L+ T HG IE+L
Sbjct: 234 DDVKSILAALNCGVNLITTIHGFGIEDL 261
>gi|228998985|ref|ZP_04158567.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
gi|229006532|ref|ZP_04164170.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228754718|gb|EEM04125.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228760602|gb|EEM09566.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
Length = 308
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKAMKQFIEGCEQYSALEEIRVRIGR-PLECIARGEVFFYDYVVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ +++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + D L + IGPP GKTT++R++AR ++ + +V IVD SEI
Sbjct: 123 EPLLSYLYDSRWLNTMVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG ++ A
Sbjct: 183 GCVKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|42783312|ref|NP_980559.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
gi|42739240|gb|AAS43167.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
Length = 308
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVENCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIVTADDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|443631736|ref|ZP_21115916.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347851|gb|ELS61908.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 305
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)
Query: 82 LLPEEMRIRVSEHPELYELIEV---------VMDLGRKPLARFPSGDFSLSDCQITVHHI 132
+LPE M+ +SE PE ++ +E+ ++L RK F S + D + + +
Sbjct: 7 VLPESMKNALSEIPE-HQWLEIEEVRIRVNRPVELIRKGQPVFLSYTGTAEDAHLILSRL 65
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDITSFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM------IVDTSSEIGG 235
LL L QD + L IGPP GKTT++R++AR+ + K +M IVD SEI G
Sbjct: 126 PLLPYLYQDSWLNTLIIGPPQTGKTTLLRDLARL--SSTGKNLMLPVKTGIVDERSEIAG 183
Query: 236 N-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
IP G +R+ V ++ + + L+ + + P+VI++DEIG + A
Sbjct: 184 CLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEALHA 241
Query: 295 GIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
G+ ++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 242 GVSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|296333400|ref|ZP_06875853.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675094|ref|YP_003866766.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149598|gb|EFG90494.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413338|gb|ADM38457.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 307
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPELYEL-IEVV-------MDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+LPE M+ +SE PE L IE V ++L RK F S ++ D + + +
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRVNRPVELIRKGQPVFLSYAGTVEDAHLILSRLS 66
Query: 134 HATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN- 183
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 67 NYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDITSFNIRIARQKLGIAEP 126
Query: 184 LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN- 236
LL L +D + L IGPP GKTT++R++AR L++ K ++ IVD SEI G
Sbjct: 127 LLPFLYRDSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKNHILPVKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+VI++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|333370541|ref|ZP_08462536.1| stage III sporulation protein AA [Desmospora sp. 8437]
gi|332977550|gb|EGK14320.1| stage III sporulation protein AA [Desmospora sp. 8437]
Length = 321
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDY--- 220
+ G RV R V G A L + G L L + PP GKTT++R++ R++++
Sbjct: 122 VTGFNLRVARQVKGVARRLLSRILPGGQLENILIVSPPQCGKTTLLRDLTRIVSSGETIP 181
Query: 221 KKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
++V +VD SEI G + +P +G R V + + + ++ + + P+++V+DEI
Sbjct: 182 SRKVGVVDERSEIAGCVEGVPQHDVGP--RTDVLDGCPKAEGMMMLIRSMSPELLVVDEI 239
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G + + A G+ L TAHG ++E + P + L+
Sbjct: 240 GRREDGEAVFEAVHAGVSLFTTAHGSSMEEVCRRPGIAQLV 280
>gi|403380881|ref|ZP_10922938.1| stage III sporulation protein AA [Paenibacillus sp. JC66]
Length = 326
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 173 RVGRAVSGSANLLQDLVQD--GASLLFIGPPGVGKTTIIREIARVLANDYK--------K 222
R+ R +G A+ L L+ D G S+L + PP GKTT++R++AR ++ Y +
Sbjct: 128 RIARERTGCASQLLPLLSDARGGSILLVSPPQHGKTTMLRDLARSISGGYTCGQIRVPGR 187
Query: 223 RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
+V I+D SEI +P +G R V + + + ++ + + P+V+++DE+G
Sbjct: 188 KVGIIDERSEIAACVKGVPTFDVGP--RTDVLDHCPKAEGMMMMIRSMSPEVLIVDELGR 245
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+A A GIQ++ATAH ++ ++ P L L
Sbjct: 246 DEDAAAVHEAIHAGIQVLATAHAASLGDIEKRPGLRTL 283
>gi|423541261|ref|ZP_17517652.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
gi|401172449|gb|EJQ79670.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
Length = 308
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKMMKQLVESCKQYNTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K + A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDTEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|373856780|ref|ZP_09599524.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
gi|372453759|gb|EHP27226.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
Length = 307
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 30/209 (14%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--QDGASLLFIGPPGVGKTTIIREIA 213
++ AIRN I R+ + G A+ L + ++ + IG P GKTT++R+IA
Sbjct: 102 QVKAIRN----ISSFNIRIAKEKIGIADSLIPYLYKENWQHTMIIGSPQTGKTTLLRDIA 157
Query: 214 RVLANDYKK------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
R++++ Y +V IVD SEI G NG IP G R+ V ++ + + ++
Sbjct: 158 RIISSGYLPMQLPPFKVGIVDERSEIAGSVNG-IPQLSFGP--RIDVLDACPKAEGMMMM 214
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN 325
+ + P V+V+DEIG K +A A GI+L+ T HG ++ + PSL+ ++
Sbjct: 215 IRSMSPDVLVVDEIGRKEDAEAIMEAVNAGIKLIMTTHGNSLAEVQRRPSLQYIL----- 269
Query: 326 VTLGDEEAHRRGVQKTVLERK-GPSTFSC 353
++ R V+ L RK GP T +C
Sbjct: 270 ----NQGIFERYVE---LSRKNGPGTVTC 291
>gi|312622749|ref|YP_004024362.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203216|gb|ADQ46543.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
Length = 313
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 40/274 (14%)
Query: 72 FDIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
+ E+ +LL LP E+ I+ + L+E+ E+ ++L PL ++ IT
Sbjct: 6 INTEVEKLLDRLPAEIVYTIKTTFEENLHEICEIKINL-NCPLIVIGKREYVFDSLIITK 64
Query: 130 HHIEHATSQV--------------GDFAVD--NRAGISRTLHRISAIRNRKG---AIIGL 170
+ S++ G F VD +R G++ + N++G +I GL
Sbjct: 65 DILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRIGVAGKFTFENG--NKQGFVSSISGL 122
Query: 171 TCRVGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------ 219
RV + V S +L+ +++D + L I PPG GKTT++R I R+L++
Sbjct: 123 NIRVAKTVRIESEKILKSIMKDSLDSIYNTLIISPPGCGKTTLLRNIIRILSSGEGILAG 182
Query: 220 YKKRVMIVDTSSEIG-GNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
RV+++D SEI N D GI R V + + + ++ AV + PQ+I +DE
Sbjct: 183 KGFRVVVIDERSEICPKNNDRREIGI----RTFVLDGVDKLRGILMAVRSLNPQIIAMDE 238
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+G+ + +A ++ G++++AT H +I+++ M
Sbjct: 239 LGSPSDYLAVCEASKMGVRIIATMHAESIKDIYM 272
>gi|220929335|ref|YP_002506244.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
gi|219999663|gb|ACL76264.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
Length = 331
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 15/187 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQ---DGASLLFIGP 200
+R G+S R + + IRN K G+ R+ R V G AN +++ +++ D + L +GP
Sbjct: 112 HRIGLSGRVVLQEGKIRNIK-DFNGINIRIAREVKGCANHIIKYIIKNNSDTYNTLIVGP 170
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVP 253
P GKTTI+R+++R+L++ + +V IVD SEI +P +G R V
Sbjct: 171 PQCGKTTILRDLSRMLSSGETEYGFSGMKVGIVDERSEIAACCKGVPQSDVG--YRTDVM 228
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ + + + + P++I+ DEIGT + A + GI+++A+AHG I L M
Sbjct: 229 DGCPKALGMEMLLRSMSPEIIITDEIGTHGDKEAILKVLNSGIKIIASAHGYNITELKMR 288
Query: 314 PSLEMLI 320
L LI
Sbjct: 289 EELLSLI 295
>gi|229019412|ref|ZP_04176235.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|229025656|ref|ZP_04182062.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|423389488|ref|ZP_17366714.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
gi|228735654|gb|EEL86243.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|228741882|gb|EEL92059.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|401641579|gb|EJS59296.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
Length = 308
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDALEEIRVRIGR-PLECIAHGEVFFYDYIATAEDALYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR ++ +V IVD SEI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLRAVL 267
>gi|226323219|ref|ZP_03798737.1| hypothetical protein COPCOM_00991 [Coprococcus comes ATCC 27758]
gi|225208409|gb|EEG90763.1| stage III sporulation protein AA [Coprococcus comes ATCC 27758]
Length = 305
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
++LA+LPE++R + H +E I+ + +PLA G L ++T +
Sbjct: 8 QILAVLPEKIRGILLNHGLDFEKIQEIRLREEQPLAVKKEGKEELFTHRVTKEELRETME 67
Query: 138 QVGDFAV----------------DNRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSG 180
V ++++ +R GIS + + IRN + I + R+ ++G
Sbjct: 68 YVSNYSLYAYENELRQGFLTIEGGHRVGISGKIISEKEQIRNFQ-YITSINIRICHEITG 126
Query: 181 SANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEI 233
AN L ++ + L + I PPG GKTT++R++ R +++ + + V +VD SEI
Sbjct: 127 CANKLFPVILEKGRLCHTMIISPPGGGKTTLLRDLVRQISDGNRWVEGRNVGVVDERSEI 186
Query: 234 GGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIA 292
GG +P +G R + ++ + + ++ V + P+VI DEIGT + A
Sbjct: 187 GGCYRGVPQNQLG--MRTDILDNCPKAEGMMMLVRSMAPEVIAADEIGTAKDVEAIEYAM 244
Query: 293 QRGIQLVATAHGVTIENLIMNPSLEMLI 320
G ++ T HG ++ + P + L+
Sbjct: 245 HCGATMLTTVHGSGMDEIREKPLVSNLV 272
>gi|229061884|ref|ZP_04199213.1| Stage III sporulation protein AA [Bacillus cereus AH603]
gi|228717397|gb|EEL69066.1| Stage III sporulation protein AA [Bacillus cereus AH603]
Length = 308
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T H ++
Sbjct: 4 VLEVLPKTMKQLVEGCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDAIHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|188590784|ref|YP_001921561.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
gi|188501065|gb|ACD54201.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
Length = 306
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I + R R V G +N + + G + + I PP GKTTI+R+I+
Sbjct: 104 VKTIRN----ISSINVRFCREVIGCSNKIMKHIISGDRIYNTIIISPPKCGKTTILRDIS 159
Query: 214 RVLANDYK------KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R ++N K K+V ++D SEIG +P +G R + ++ ++ + +I ++
Sbjct: 160 RNISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLG--IRTDILDNCLKKEGMIMSI 217
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P+V++ DEIGTK + A G+ ++ + HG TI+++ + LI
Sbjct: 218 RSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|392941068|ref|ZP_10306712.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
gi|392292818|gb|EIW01262.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
Length = 332
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 27/194 (13%)
Query: 139 VGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLV---QDGAS 194
VG ++N G +TL IS G R+ + + G A +L+ L+ ++ +
Sbjct: 111 VGKCVLEN--GYIKTLKNIS----------GYNYRISKEIIGVAEEILKYLITPSKNVYN 158
Query: 195 LLFIGPPGVGKTTIIREIARVLAN--DY----KKRVMIVDTSSEIGG--NGDIPHPGIGN 246
+L I PP GKTT++R+I R ++N D+ K+V VD SEI G NG IP +G
Sbjct: 159 ILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNG-IPQMDVG- 216
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + +I + + P+V+V DEIG K + A + G++++ T H
Sbjct: 217 -IRTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 307 IENLIMNPSLEMLI 320
IE+L+ P L+ +I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|386714784|ref|YP_006181107.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
gi|384074340|emb|CCG45833.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
Length = 325
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 98/182 (53%), Gaps = 15/182 (8%)
Query: 148 AGISRTL-HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPPGV 203
AG + T+ H++ +++ I + RV + +G N L+ L Q+G S L IGPP
Sbjct: 92 AGKANTVNHQVETLKH----IAFMNIRVAKNTTGQINQLIPYLYQNGRWTSTLIIGPPHS 147
Query: 204 GKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQ 258
GKTT++RE+A+ + + ++ +V IVD SEI + +P +G R V ++ +
Sbjct: 148 GKTTLLRELAQRIGSGHQDHRASKVAIVDERSEIAASLRGVPQLDVG--ERTDVMDACPK 205
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
+ ++ + + P+V+++DEIG +A A G++++ + HG +I N+ PS
Sbjct: 206 AEGMMMMIRSMSPEVLIVDEIGGVADANAIREATFTGVEVICSIHGTSITNVQKRPSARE 265
Query: 319 LI 320
LI
Sbjct: 266 LI 267
>gi|251778035|ref|ZP_04820955.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082350|gb|EES48240.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 306
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I + R R V G +N + + G + + I PP GKTTI+R+I+
Sbjct: 104 VKTIRN----ISSINVRFCREVIGCSNKIMKHIISGDRIYNTIIISPPKCGKTTILRDIS 159
Query: 214 RVLANDYK------KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R ++N K K+V ++D SEIG +P +G R + ++ ++ + +I ++
Sbjct: 160 RNISNGMKSLGLNGKKVSVIDERSEIGACYLGVPQSDLG--IRTDILDNCLKKEGMIMSI 217
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P+V++ DEIGTK + A G+ ++ + HG TI+++ + LI
Sbjct: 218 RSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|440781945|ref|ZP_20960173.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
gi|440220663|gb|ELP59870.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
Length = 305
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG 192
H G+ V+N I + + +S+ L R+ R V G ++ ++ +V+D
Sbjct: 89 HRVGICGNCIVEN--NIVKIIKNVSS----------LNIRICREVIGCSDKVMPWIVKDN 136
Query: 193 ASL--LFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDTSSEIGGNGD-IPHPG 243
L + I PP GKTT+IR+I R +++ K K V ++D SEI + D IP
Sbjct: 137 NVLNTIIISPPNCGKTTLIRDITRNISSGSKNFGIRGKNVCVIDERSEICASSDGIPQLN 196
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
+G R V ++ + + ++ A+ + P VIV DEIGT + + + GI L+ T H
Sbjct: 197 VG--IRTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTYEDVKSILSALNCGINLITTIH 254
Query: 304 GVTIENL 310
G IE+L
Sbjct: 255 GFGIEDL 261
>gi|430759091|ref|YP_007209015.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023611|gb|AGA24217.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 307
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHAT 136
+LPE M+ +SE PE E+ EV + + R P+ G S + H I
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAHLILSRL 65
Query: 137 SQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
S + ++ + G R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGGN- 236
LL L QD + L IGPP GKTT++R++AR+ + K + IVD SEI G
Sbjct: 126 PLLPYLYQDSWLNTLIIGPPQTGKTTLLRDLARLSSTGKKPMLPVKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|384182023|ref|YP_005567785.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328107|gb|ADY23367.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 308
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKCCDALEEIRVRIGR-PLECIAQGEVFFYDYIVTAEDAIYLLNK 62
Query: 139 VGDFAVDN------RAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P ++++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|452975004|gb|EME74823.1| stage III sporulation protein AA [Bacillus sonorensis L12]
Length = 307
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 188 LVQDGA-SLLFIGPPGVGKTTIIREIARVLANDY----KKRVMIVDTSSEIGG--NGDIP 240
L Q+G + L IGPP GKTT++R++ R+++ K+ IVD SEI G NG IP
Sbjct: 131 LYQNGWLNTLIIGPPQTGKTTLLRDLGRLISTGSGKIPAKKAAIVDERSEIAGCVNG-IP 189
Query: 241 HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
GN R+ + ++ + + L+ + + P+V++ DEIG +A A G+ ++
Sbjct: 190 QYKFGN--RIDILDACPKAEGLMMMIRSMSPEVVIADEIGRMEDAEALLEAVHAGVSVIV 247
Query: 301 TAHGVTIENLIMNPSLEML 319
+AHG T ++ PSL++L
Sbjct: 248 SAHGFTYSDVSKRPSLKLL 266
>gi|152976597|ref|YP_001376114.1| sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
gi|152025349|gb|ABS23119.1| Sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
Length = 307
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ MR + E L E+ + +GR PL G + +T H ++
Sbjct: 4 VLEVLPKMMRELIEGCKEYNALEEIRVRIGR-PLECIAHGKVFFHEYIVTPEDAMHLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAII------GLTCRVGRAVSGSA 182
+ F++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQFSIYTIEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKMGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVL------ANDYKKRVMIVDTSSEIG 234
L + + L + IGPP GKTT++R++AR + AN +V IVD SEI
Sbjct: 123 EPLLSYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGFANIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG ++ A
Sbjct: 183 GCVKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + +++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSFDDIRKRPSLKAVM 267
>gi|421874483|ref|ZP_16306087.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
gi|372456527|emb|CCF15636.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
Length = 320
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 167 IIGLTCRVGRAVSGSA-NLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA--NDYK 221
I R+ R G A ++L L G S L I PP GKTT++R++AR ++ N++
Sbjct: 121 ITSFNIRIAREKKGVARDILAYLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGNEWS 180
Query: 222 --KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
K+V IVD SEI G NG IP +G R V ++ + ++ + + P ++V+D
Sbjct: 181 SSKKVGIVDERSEIAGCYNG-IPQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVVVD 237
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG + ++ A G+ ++ +AHG+++E++ P++ LI
Sbjct: 238 EIGRQEDSEAIWEALHAGVGVLCSAHGISLEDIAKRPTISRLI 280
>gi|222528982|ref|YP_002572864.1| ATPase AAA [Caldicellulosiruptor bescii DSM 6725]
gi|222455829|gb|ACM60091.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
Length = 313
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 40/274 (14%)
Query: 72 FDIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITV 129
+ E+ +LL LP E+ I+ + L+E+ E+ ++L PL ++ IT
Sbjct: 6 INTEVEKLLDRLPAEIVYTIKTTFEENLHEICEIKINL-NCPLIVIGKREYVFESLIITK 64
Query: 130 HHIEHATSQV--------------GDFAVD--NRAGISRTLHRISAIRNRKG---AIIGL 170
+ S++ G F V+ +R G++ + N++G +I GL
Sbjct: 65 EILNKCISRLTNNSLFTYEKNILQGYFTVNGGHRIGVAGKFTFENG--NKQGFVSSISGL 122
Query: 171 TCRVGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------ 219
RV + V S +L+ +V++ + L I PPG GKTT++R I R+L++
Sbjct: 123 NIRVAKTVRIESEKILKSIVKENLDSIYNTLIISPPGCGKTTLLRNIIRILSSGEGILAG 182
Query: 220 YKKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
RV+++D SEI N D GI R V + + + ++ AV + PQ+I +DE
Sbjct: 183 RGLRVVVIDERSEICTENNDKREIGI----RTFVLDGVDKLRGILMAVRSLNPQIIAMDE 238
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+G+ + +A ++ G++++AT H +I+++ M
Sbjct: 239 LGSPSDYLAVCEASKMGVRIIATMHAESIKDIYM 272
>gi|288553343|ref|YP_003425278.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
gi|288544503|gb|ADC48386.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
Length = 319
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKR---- 223
R+ R G A+ L + + L LFIGPP GKTTI+R++AR+++ +KR
Sbjct: 119 FNIRIARQSIGMADRLIHYLFENRWLNTLFIGPPQTGKTTILRDVARLISEGDEKRGIAP 178
Query: 224 --VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
V I+D SEI + +P +G R+ V + + + ++ + + P V+++DEIG
Sbjct: 179 LKVGIIDERSEICASMRGVPQHQLGP--RIDVLDGCPKAEGMMMMIRSMSPDVLIVDEIG 236
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGVQNVTLGDEEAHRRGVQ 339
+ +A G+ ++ T HG TI++++ P+L E++ G ++ + R GV
Sbjct: 237 RVEDVLAVQEAVHAGVGVITTVHGHTIDDVLKRPALKELMQFGAFDLAIELTRTTRPGVV 296
Query: 340 KTV 342
K +
Sbjct: 297 KKI 299
>gi|386759038|ref|YP_006232254.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
gi|384932320|gb|AFI28998.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
Length = 307
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPELYEL-IEVV-------MDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+LPE M+ +SE PE L IE V ++L RK F S + D + + +
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRVNRPIELIRKGQPVFLSYVGTAEDTHLILSRLS 66
Query: 134 HATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN- 183
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 67 NYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAEP 126
Query: 184 LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN- 236
LL L Q + L IGPP GKTT++R++AR L++ K R++ IVD SEI G
Sbjct: 127 LLPYLYQTSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKNRMLPVKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|423615466|ref|ZP_17591300.1| stage III sporulation protein AA [Bacillus cereus VD115]
gi|401260003|gb|EJR66176.1| stage III sporulation protein AA [Bacillus cereus VD115]
Length = 308
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 36/271 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ V + L E+ + +GR PL G+ D T + ++
Sbjct: 4 VLEVLPKTMKQLVESCKQYDTLEEIRVRIGR-PLECIAHGEVFFYDYIATAEDASYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS-------------AIRNRKGAIIGLTCRVGRAV 178
+ F++ R ++ R HRI IR+ + R+ R
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRD----VSSFNIRIARQK 118
Query: 179 SGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTS 230
G A L + + L + IGPP GKTT++R++AR ++ +V IVD
Sbjct: 119 IGIAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDER 178
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G R+ V ++ + + ++ + + P V+++DEIG K ++ A
Sbjct: 179 SEIAGCVKGIPQYEFGT--RLDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIM 236
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + +++ PSL+ ++
Sbjct: 237 EAVHAGVQLFISAHGFSYDDVEKRPSLQAVL 267
>gi|433462230|ref|ZP_20419819.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
gi|432189119|gb|ELK46252.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
Length = 325
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 26/202 (12%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGS-ANLLQDLVQDG--ASLLFIGPPGVGKTTIIRE 211
HRI +++ I + RV R V+G ++LL L DG S + IGPP GKTT++R
Sbjct: 100 HRIDTLKH----ITFMNIRVAREVAGQVSSLLPFLYADGRWKSTMIIGPPHSGKTTLLRA 155
Query: 212 IARVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
+++ + +D+ +V +VD SEI + +P +G R V + + ++ +
Sbjct: 156 LSKWIGSDHTGYRGCKVAVVDERSEIAASLRGVPQLEVGV--RTDVMDGCPKAAGMMMMI 213
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNV 326
+ P V+++DEIG +A A + G+Q++ + HG T++ + PS L+
Sbjct: 214 RSMSPDVLIVDEIGGLEDADAVREASYTGVQVICSIHGRTLDGVRKRPSARSLV------ 267
Query: 327 TLGDEEAHRRGVQKTVLERKGP 348
+E+ R V VLER P
Sbjct: 268 ---EEQVFERYV---VLERMSP 283
>gi|339010279|ref|ZP_08642849.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
gi|338772434|gb|EGP31967.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
Length = 320
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 167 IIGLTCRVGRAVSGSA-NLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA--NDYK 221
I R+ R G A ++L L G S L I PP GKTT++R++AR ++ N++
Sbjct: 121 ITSFNIRIAREKKGVARDILAYLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGNEWS 180
Query: 222 --KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
K+V IVD SEI G NG IP +G R V ++ + ++ + + P ++V+D
Sbjct: 181 SSKKVGIVDERSEIAGCYNG-IPQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVVVD 237
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG + ++ A G+ ++ +AHG+++E++ P++ LI
Sbjct: 238 EIGRQEDSEAIWEALHAGVGVLCSAHGISLEDIAKRPTISRLI 280
>gi|407979685|ref|ZP_11160495.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
gi|407413697|gb|EKF35386.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
Length = 303
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRM 250
L IGPP GKTT++R++AR+++ ++ IVD SEI G +P G+ R+
Sbjct: 136 LIIGPPQTGKTTLLRDLARLVSTGTTTISPRKTGIVDERSEIAGCIRGVPQHSFGH--RI 193
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V ++ + + L+ + + P+VI++DEIG + A G+ ++ +AHG ++E+L
Sbjct: 194 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLEDL 253
Query: 311 IMNPSLEML 319
PS E L
Sbjct: 254 YKRPSFEPL 262
>gi|402776705|ref|YP_006630649.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
gi|402481885|gb|AFQ58394.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
Length = 308
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 41/303 (13%)
Query: 76 LGRLLALLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVH 130
L + +LPE M+ +SE PE E+ EV + + R P+ G S + H
Sbjct: 2 LNEIAEVLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAH 60
Query: 131 HIEHATSQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRA 177
I S + ++ + G R HR+ + G + GL R+ R
Sbjct: 61 LILSRLSNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQ 120
Query: 178 VSGSAN-LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTS 230
G A LL L Q+ + L IGPP GKTT++R++AR L++ KK ++ IVD
Sbjct: 121 KLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDER 179
Query: 231 SEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAS 289
SEI G IP G +R+ V ++ + + L+ + + P+V+++DEIG + A
Sbjct: 180 SEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALL 237
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPS 349
G+ ++ +AHG +I +L+ PSL+ L +E A R ++ + KGP
Sbjct: 238 EALHAGVSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPG 286
Query: 350 TFS 352
T S
Sbjct: 287 TVS 289
>gi|228992941|ref|ZP_04152865.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
gi|228766798|gb|EEM15437.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
Length = 308
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + + L E+ + +GR+ L G+ D +T + ++
Sbjct: 4 VLEVLPKAMKQFIEGCEQYSALEEIRVRIGRQ-LECIARGEVFFYDYVVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ +++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIG 234
L + D L + IGPP GKTT++R++AR ++ + +V IVD SEI
Sbjct: 123 EPLLSYLYDSRWLNTMVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P V+++DEIG ++ A
Sbjct: 183 GCVKGIPQYEFGQ--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|75763195|ref|ZP_00742959.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489310|gb|EAO52762.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 208
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGN-GDIPHPGIGNAR 248
+ IGPP GKTT++R++AR ++ +V IVD SEI G IP G
Sbjct: 38 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 95
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R+ V ++ + + ++ + + P ++++DEIG K ++ A G+QL +AHG + E
Sbjct: 96 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 155
Query: 309 NLIMNPSLEMLI 320
+++ PSL+ ++
Sbjct: 156 DVVRRPSLKAVL 167
>gi|407959688|dbj|BAM52928.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7613]
gi|407965263|dbj|BAM58502.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7003]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 82 LLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHAT 136
+LPE M+ +SE PE E+ EV + + R P+ G S + H I
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAHLILSRL 65
Query: 137 SQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
S + ++ + G R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN 236
LL L Q+ + L IGPP GKTT++R++AR L++ KK ++ IVD SEI G
Sbjct: 126 PLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGC 184
Query: 237 -GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G
Sbjct: 185 LRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAG 242
Query: 296 IQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
+ ++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 243 VSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|16079499|ref|NP_390323.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310366|ref|ZP_03592213.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. 168]
gi|221314690|ref|ZP_03596495.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319613|ref|ZP_03600907.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. JH642]
gi|221323889|ref|ZP_03605183.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SMY]
gi|418032384|ref|ZP_12670867.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449094940|ref|YP_007427431.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452915262|ref|ZP_21963888.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
gi|730774|sp|Q01367.1|SP3AA_BACSU RecName: Full=Stage III sporulation protein AA
gi|581722|emb|CAA43959.1| SpoIIIAA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|1000359|gb|AAA76720.1| SpoIIIAA [Bacillus subtilis subsp. subtilis str. JH642]
gi|1303904|dbj|BAA12560.1| SpoIIIAA [Bacillus subtilis]
gi|2634877|emb|CAB14374.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|351471247|gb|EHA31368.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449028855|gb|AGE64094.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452115610|gb|EME06006.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 82 LLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHAT 136
+LPE M+ +SE PE E+ EV + + R P+ G S + H I
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAHLILSRL 65
Query: 137 SQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
S + ++ + G R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN 236
LL L Q+ + L IGPP GKTT++R++AR L++ KK ++ IVD SEI G
Sbjct: 126 PLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGC 184
Query: 237 -GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G
Sbjct: 185 LRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAG 242
Query: 296 IQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
+ ++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 243 VSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|312793180|ref|YP_004026103.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180320|gb|ADQ40490.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 313
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 40/273 (14%)
Query: 73 DIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ E+ +LL LP E+ I+++ L+E+ E+ ++L PL ++ IT
Sbjct: 7 NTEVEKLLDKLPAEIVYTIKMAFEKRLHEICEIKINL-NCPLIVIGKREYVFDSLIITKE 65
Query: 131 HIEHATSQV--------------GDFAVD--NRAGISRTLHRISAIRNRKG---AIIGLT 171
+ S++ G F VD +R G++ + N++G +I GL
Sbjct: 66 ILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRIGVAGKFTFENG--NKQGFVSSISGLN 123
Query: 172 CRVGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------Y 220
RV +AV +L+++V++ + L I PPG GKTT++R I R+L++
Sbjct: 124 IRVSKAVRIEPEKILKNIVKENLDSIYNTLIISPPGCGKTTLLRNIIRILSSGEGILAGR 183
Query: 221 KKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
RV+++D SEI + D GI R V + + + ++ AV + PQ+I +DE+
Sbjct: 184 GFRVVVIDERSEICAVDNDRREIGI----RTFVLDGVDKLRGILMAVRSLNPQIIAMDEL 239
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
G+ + +A ++ G++++AT H +++++ M
Sbjct: 240 GSPSDYLAVCEASKMGVKIIATMHAESVKDIYM 272
>gi|384176064|ref|YP_005557449.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595288|gb|AEP91475.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 82 LLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHAT 136
+LPE M+ +SE PE E+ EV + + R P+ G S + H I
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAHLILSRL 65
Query: 137 SQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
S + ++ + G R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN 236
LL L Q+ + L IGPP GKTT++R++AR L++ KK ++ IVD SEI G
Sbjct: 126 PLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKSMLPVKTGIVDERSEIAGC 184
Query: 237 -GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRG 295
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G
Sbjct: 185 LRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAG 242
Query: 296 IQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
+ ++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 243 VSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|194016755|ref|ZP_03055368.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
gi|194011361|gb|EDW20930.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD-- 191
H G V+N GI + L IS+ R+ + G A + D
Sbjct: 88 HRVGLAGKVIVEN--GIVKGLRDISS----------FNIRIAKEKVGIALPFLPYLYDEH 135
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGN 246
+ L IGPP GKTT++R+IAR+ + K K+ I+D SEI G +P G+
Sbjct: 136 WCNTLIIGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFGH 195
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R+ V ++ + + L+ + + P+V+++DEIG + A G+ ++ + HG +
Sbjct: 196 --RVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVTIIVSVHGYS 253
Query: 307 IENLIMNPSLEML 319
+EN+ PSL+ L
Sbjct: 254 LENVYKRPSLKPL 266
>gi|170757502|ref|YP_001781446.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|429246197|ref|ZP_19209539.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
gi|169122714|gb|ACA46550.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|428756801|gb|EKX79331.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
Length = 307
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 170 LTCRVGRAVSGSANLLQD-LVQDGASL--LFIGPPGVGKTTIIREIARVLA------NDY 220
L R+ R + ++ L+ +V++G L + I PP GKTTIIR+I++ ++ N
Sbjct: 112 LNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLK 171
Query: 221 KKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
K+V ++D SEI G NG +P +G R V ++ + + ++ A+ + P+VI+ DE
Sbjct: 172 GKKVSVIDERSEIAGSYNG-VPQLDVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDE 228
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
IGT + + G+ L+ T HG +E++ P + ++
Sbjct: 229 IGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|148379856|ref|YP_001254397.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|153932422|ref|YP_001384153.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|153935244|ref|YP_001387694.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|168180483|ref|ZP_02615147.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226949193|ref|YP_002804284.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
gi|148289340|emb|CAL83436.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|152928466|gb|ABS33966.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|152931158|gb|ABS36657.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|182668758|gb|EDT80736.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226844597|gb|ACO87263.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
Length = 307
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 170 LTCRVGRAVSGSANLLQD-LVQDGASL--LFIGPPGVGKTTIIREIARVLA------NDY 220
L R+ R + ++ L+ +V++G L + I PP GKTTIIR+I++ ++ N
Sbjct: 112 LNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLK 171
Query: 221 KKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
K+V ++D SEI G NG +P +G R V ++ + + ++ A+ + P+VI+ DE
Sbjct: 172 GKKVSVIDERSEIAGSYNG-VPQLDVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDE 228
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
IGT + + G+ L+ T HG +E++ P + ++
Sbjct: 229 IGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|332652603|ref|ZP_08418348.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
gi|332517749|gb|EGJ47352.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
Length = 303
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 28/238 (11%)
Query: 102 EVVMDLGRKPLARFPSGDFSLSDCQITVHHIEH-----ATSQVGDFAVDNRAG--ISRTL 154
E+ + +G A FP G+ SL +T +E + + V A R G
Sbjct: 37 ELRLRIGHPMTAVFPQGELSLGTNPVTGRDLEQLLELASRASVHTVADQLRRGYLTVEGG 96
Query: 155 HRISAIRN---RKGAIIGL------TCRVGRAVSGSAN-LLQDLV-QDGA--SLLFIGPP 201
HR+ R G I GL RV R V+G+A + Q L+ Q GA S L + PP
Sbjct: 97 HRVGLCGTPVLRDGQIHGLGRLSSAAIRVARQVTGAAAPVAQKLLEQSGALCSTLILAPP 156
Query: 202 GVGKTTIIREIARVLAND---YKKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSE 256
G GKTT++R++ R++++ +RV + D E+ NG +P +G R V
Sbjct: 157 GAGKTTLLRDLIRMVSHGEGMTPQRVAVADERGEVAALWNG-VPQLDVGE--RTDVLEGC 213
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ + L+ + PQV+ DEI + A + A G++L+ATAHG E+L P
Sbjct: 214 PKAQALMMLLRAMNPQVLAADEITAPEDVAALISAAGCGVKLLATAHGSAREDLARRP 271
>gi|389571702|ref|ZP_10161791.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
gi|388428596|gb|EIL86392.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
Length = 307
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRM 250
L IGPP GKTT++R++AR+++ ++ IVD SEI G +P G+ R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLVSTGTTAISPRKTGIVDERSEIAGCIRGVPQHSFGH--RI 197
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V ++ + + L+ + + P+VI++DEIG + A G+ ++ +AHG ++E+L
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLEDL 257
Query: 311 IMNPSLEML 319
PS E L
Sbjct: 258 SKRPSFEPL 266
>gi|212638773|ref|YP_002315293.1| stage III sporulation protein AA [Anoxybacillus flavithermus WK1]
gi|212560253|gb|ACJ33308.1| Stage III sporulation protein AA (mutants block sporulation after
engulfment) [Anoxybacillus flavithermus WK1]
Length = 313
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A L + DG + IG P GKTT++R+IA
Sbjct: 108 KVKAIRH----ITSFNIRMARQQIGMAAPLLPYLYDGRWFNTVIIGAPQTGKTTLLRDIA 163
Query: 214 RVLANDYK------KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R++++ ++V IVD SEI G IP G R+ V ++ + + ++ +
Sbjct: 164 RIVSSGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC--RVDVLDACPKAEGMMMMI 221
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+++DEIG++ + A GI L TAHG +++L+ PSL +I
Sbjct: 222 RSMSPDVLIVDEIGSEADCTAILEAVHAGIGLFMTAHGRHLDDLMKRPSLRPII 275
>gi|170760679|ref|YP_001787223.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
gi|169407668|gb|ACA56079.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
Length = 307
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 26/198 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD-LVQDG 192
H G +D G +T+ IS+ L R+ R + ++ L+ +V++G
Sbjct: 88 HRVGICGRCVID--GGKVKTIRDISS----------LNIRICREIYNASKLVMPYIVENG 135
Query: 193 ASL--LFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDTSSEIGG--NGDIPHP 242
L + I PP GKTTIIR+I++ +++ K+V ++D SEI G NG +P
Sbjct: 136 QVLNTIIISPPKCGKTTIIRDISKKISDGVDALSLKGKKVSVIDERSEIAGSYNG-VPQL 194
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R V ++ + + ++ A+ + P+VI+ DEIGT + + G+ L+ T
Sbjct: 195 DVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTI 252
Query: 303 HGVTIENLIMNPSLEMLI 320
HG +E++ P + ++
Sbjct: 253 HGFGVEDIYNRPVFKEIV 270
>gi|433444521|ref|ZP_20409393.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001549|gb|ELK22424.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
Length = 307
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIA 213
++ AIR+ I R+ R G A L + DG + + IG P GKTT++R+IA
Sbjct: 102 KVKAIRH----ITSFNIRMARQQIGIAEPLLPYLYDGRWMNTIIIGAPQTGKTTLLRDIA 157
Query: 214 RVLANDYK------KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R+++ ++V IVD SEI G IP G R+ V ++ + + ++ +
Sbjct: 158 RIVSGGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC--RVDVLDACPKAEGMMMMI 215
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+V+DEIG++ + A G+ L TAHG +++L+ PSL +I
Sbjct: 216 RSMSPDVLVVDEIGSEADCTAILEAVHAGVGLFMTAHGRHLDDLMKRPSLRPII 269
>gi|253578537|ref|ZP_04855809.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850855|gb|EES78813.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 164 KGAIIGL---TC---RVGRAVSGSANLLQDLVQDG---ASLLFIGPPGVGKTTIIREIAR 214
+G I+G+ +C R+ + G A+ + ++ A+ L I PP GKTT++R+I R
Sbjct: 110 RGRIMGMKYISCINVRLAHEIQGCADKVMPYIRTEKWVANTLIISPPRCGKTTLLRDIIR 169
Query: 215 VLANDYKKR----VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENH 269
L+N + + +VD SE+ G IP +G R V + + + + V +
Sbjct: 170 QLSNGWANTQGLTIGVVDERSELAGCYQGIPQNDLG--MRTDVLDCCPKSEGMQMLVRSM 227
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
P V+ +DE+G + + A ++ G +L+ATAHG +E+++ P L+G
Sbjct: 228 SPDVVAVDELGCEEDFKAVDSVIHCGCKLIATAHGSCLEDVLDQPFFYKLMG 279
>gi|452992565|emb|CCQ95992.1| Stage III sporulation protein AA [Clostridium ultunense Esp]
Length = 324
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLLF----IGPPGVGKTTIIREIARVLANDYKK--- 222
L R+ R G + L + D + ++ + PP GKTTI+R++ R+L+N K
Sbjct: 132 LNMRIAREKIGVSEKLIKYIIDFSHTIYDTLIVSPPQCGKTTILRDLIRILSNGSKDLGG 191
Query: 223 ---RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+V ++D SE+ G NG +P IG R V + + I + P ++ +D
Sbjct: 192 KGMKVGVIDERSELAGMYNG-MPQFDIG--LRTDVLDGCNKKDGTIMLIRAMSPDIVAMD 248
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG+ + A + G++++AT HG T+E+L+ SL MLI
Sbjct: 249 EIGSINDVDAIHEALKAGVKIIATIHGSTLEDLVSKKSLRMLI 291
>gi|428279930|ref|YP_005561665.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
gi|291484887|dbj|BAI85962.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
Length = 307
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 22/194 (11%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
I R+ R G A LL L Q+ + L IGPP GKTT++R++AR L++ KK +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNM 167
Query: 225 M-----IVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+ IVD SEI G IP G +R+ V ++ + + L+ + + P+V+++DE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
IG + A G+ ++ +AHG +I +L+ PSL+ L +E A R +
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYL 276
Query: 339 QKTVLERKGPSTFS 352
+ + KGP T S
Sbjct: 277 ELS--RAKGPGTVS 288
>gi|403070093|ref|ZP_10911425.1| stage III sporulation protein AA [Oceanobacillus sp. Ndiop]
Length = 325
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSA-NLLQDLV-QDGASLLFIGPPGVGKTTIIREIA 213
++ A++N I R+ + GSA L+Q + + + L +GPP GKTT+IR++
Sbjct: 103 KVKALQN----ITFFNIRIAKEKIGSATGLVQHIFSRKYLNTLIVGPPQTGKTTLIRDLT 158
Query: 214 RVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
R++A+ Y K +V ++D SEIG + +P +G R V ++ + ++ + +
Sbjct: 159 RLIASGYGKISPRKVGVIDERSEIGASLKGVPQHNLG--LRTDVLDACPKSDGMMMMIRS 216
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI-GGVQNVT 327
P V+V+DEIG+ + A G+ +V + HG ++ L PSL+ L + +
Sbjct: 217 MSPDVLVVDEIGSGEDIAALMEAINAGVTIVCSIHGNDLKELKKRPSLQQLFEQQIFDRY 276
Query: 328 LGDEEAHRRGVQKTVLERK 346
+ ++ HR G +L++K
Sbjct: 277 ILLDKLHRPGEAAKILDKK 295
>gi|424836158|ref|ZP_18260815.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
gi|365977560|gb|EHN13659.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
Length = 307
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 26/198 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD-LVQDG 192
H G +D G +T+ IS+ L R+ R + ++ L+ +V++G
Sbjct: 88 HRVGICGRCVID--GGKVKTIRDISS----------LNIRICREIYNASKLVMPYIVENG 135
Query: 193 ASL--LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIGG--NGDIPHP 242
L + I PP GKTTIIR+I++ ++ N ++V ++D SEI G NG +P
Sbjct: 136 QVLNTIIISPPKCGKTTIIRDISKKISDGVDSLNLKGQKVSVIDERSEIAGSYNG-VPQL 194
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R V ++ + + ++ A+ + P+VI+ DEIGT + + G+ L+ T
Sbjct: 195 DVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTI 252
Query: 303 HGVTIENLIMNPSLEMLI 320
HG +E++ P + ++
Sbjct: 253 HGFGVEDIYNRPVFKEIV 270
>gi|51893000|ref|YP_075691.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
gi|51856689|dbj|BAD40847.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
Length = 292
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 146 NRAGI-SRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDG--ASLLFIGPP 201
+R G+ R + IR K + L R+ R V G+A+ LL LV+ G S L + PP
Sbjct: 78 HRVGLCGRAVTEACRIRTLK-QVASLNVRIAREVPGAADGLLPHLVRGGRFLSTLLVSPP 136
Query: 202 GVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPN 254
GKTT++R++ R L+ + +V +VD SE+ G +P +G R V +
Sbjct: 137 QAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCGVPQRDVGP--RTDVLD 194
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ + L+ + PQV+ DEIG +A+A G+ ++ATAHG + ++ P
Sbjct: 195 GCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLATAHGAGLSDVRRRP 254
Query: 315 SLEMLI 320
+L L+
Sbjct: 255 ALAELL 260
>gi|451819552|ref|YP_007455753.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785531|gb|AGF56499.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 308
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 16/164 (9%)
Query: 157 ISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ IRN I L R+ R V G ++ + + + + I PP GKTTIIR+IA
Sbjct: 106 VKTIRN----ISSLNIRICREVIGCSDKIMKYIASKIKIYNTIIISPPKCGKTTIIRDIA 161
Query: 214 RVLANDY------KKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R ++N K+V++VD SEI + IP +G R V ++ ++ + LI A+
Sbjct: 162 RNISNGVFSLGVSGKKVVVVDERSEIAACHLGIPQSNLG--LRTDVLDNCLKREGLIMAI 219
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ P+V++ DEIGTK + A G+ ++ T HG T+E+L
Sbjct: 220 RSLSPEVLICDEIGTKGDTEALMMAFNSGVNIITTIHGFTVEDL 263
>gi|347542681|ref|YP_004857318.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985717|dbj|BAK81392.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
H G++ +NR + L IS+ L R+ R VSG + + G
Sbjct: 71 HRVGITGEWVFENRE--VKYLKNISS----------LNIRICREVSGFGKKFINHIYKGG 118
Query: 194 SLL---FIGPPGVGKTTIIREIARVLAN-----DYKKRVMIVDTSSEIGGN-GDIPHPGI 244
+L I PP GKTT++R+++++++N + +V I+D SEI + +P I
Sbjct: 119 EILNTLIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSIIDERSEIAASFRGVPQLDI 178
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G R + ++ ++ K +I A+ + P+VIV DEIGT+ + + G+ +++T HG
Sbjct: 179 G--IRTDIYDNCLKSKGIILAIRSMAPEVIVCDEIGTREDFESILVAYNSGVSIISTIHG 236
>gi|312127950|ref|YP_003992824.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
gi|311777969|gb|ADQ07455.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
Length = 313
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 36/271 (13%)
Query: 73 DIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ E+ +LL LP E+ I+++ L+E+ E+ ++L PL ++ IT
Sbjct: 7 NTEVEKLLGKLPAEIVYTIKMAFEKSLHEICEIKINL-NCPLIVIGKREYVFDSLIITKE 65
Query: 131 HIEHATSQV--------------GDFAVD--NRAGIS-RTLHRISAIRNRKGAIIGLTCR 173
+ S++ G F VD +R G++ + + + +I GL R
Sbjct: 66 ILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRIGVAGKFTFENGSKQGFVSSISGLNIR 125
Query: 174 VGRAVS-GSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAND------YKK 222
V +AV +L+++V++ + L I PPG GKTT++R I R+L++
Sbjct: 126 VSKAVRIEPEKILKNIVKENLNSIYNTLIISPPGCGKTTLLRNIIRILSSGEGILAGRGF 185
Query: 223 RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
RV+++D SEI + D GI R V + + + ++ AV + PQ+I +DE+G+
Sbjct: 186 RVVVIDERSEICAVDNDRREIGI----RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGS 241
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ +A ++ G++++AT H +++++ M
Sbjct: 242 PSDYLAVCEASKMGVKIIATMHAESVKDIYM 272
>gi|187779500|ref|ZP_02995973.1| hypothetical protein CLOSPO_03096 [Clostridium sporogenes ATCC
15579]
gi|187773125|gb|EDU36927.1| stage III sporulation protein AA [Clostridium sporogenes ATCC
15579]
Length = 310
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 26/198 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQD-LVQDG 192
H G +D G +T+ IS+ L R+ R + ++ L+ +V++G
Sbjct: 91 HRVGICGRCVID--GGKVKTIRDISS----------LNIRICREIYNASKLVMPYIVENG 138
Query: 193 ASL--LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIGG--NGDIPHP 242
L + I PP GKTTIIR+I++ ++ N ++V ++D SEI G NG +P
Sbjct: 139 QVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLKGQKVSVIDERSEIAGSYNG-VPQL 197
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R V ++ + + ++ A+ + P+VI+ DEIGT + + G+ L+ T
Sbjct: 198 DVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTI 255
Query: 303 HGVTIENLIMNPSLEMLI 320
HG +E++ P + ++
Sbjct: 256 HGFGVEDIYNRPVFKEIV 273
>gi|138895978|ref|YP_001126431.1| stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196248870|ref|ZP_03147570.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
gi|134267491|gb|ABO67686.1| Stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196211746|gb|EDY06505.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
Length = 306
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH---HIEHA 135
+ +LP+ + + V + P + IE + +PL +G L ++T + +
Sbjct: 4 VWGILPKTIAMAVQQLPSWRDGIEEIRIRVSRPLEVIANGTARLLPYEVTKEDGVQLLNK 63
Query: 136 TSQVGDFAVD-------------NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
S+ +AV+ +R G++ + ++ AIR+ + R+ +
Sbjct: 64 LSRYSIYAVEEELKRGFMTIEGGHRVGLAGKVITEGGKVKAIRD----VASFNIRIAKEQ 119
Query: 179 SGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSE 232
G A+ L V DG + IG P GKTT++R++AR++++ ++ +V IVD SE
Sbjct: 120 VGIADPLIPYVYDGRWCHTMIIGSPQTGKTTLLRDVARLISSGTERIPAQKVAIVDERSE 179
Query: 233 IGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTI 291
I G IP G R+ V ++ + + ++ + + P VI++DEIG + ++ A
Sbjct: 180 IAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRSMSPDVIIVDEIGREEDSEAVLEA 237
Query: 292 AQRGIQLVATAHGVTIENLIMNPSL 316
A G+ + T HG +I+++ P+L
Sbjct: 238 ANAGVSVWTTVHGRSIKDVQQRPTL 262
>gi|229086768|ref|ZP_04218932.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
gi|228696543|gb|EEL49364.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
Length = 308
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
+L +LP+ M+ + + L E+ + +GR PL G+ D +T + ++
Sbjct: 4 VLEVLPKHMKQFIEGCEQYNTLEEIRVRIGR-PLECIAHGEVFFYDYVVTAEDAIYLLNK 62
Query: 139 VGDFAVD------NRAGIS-RTLHRIS---AIRNRKGAI------IGLTCRVGRAVSGSA 182
+ +++ R ++ R HRI + K A+ R+ R G A
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRDVSSFNIRIARQKIGIA 122
Query: 183 NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKR------VMIVDTSSEIG 234
L + L + IGPP GKTT++R++AR ++ R V IVD SEI
Sbjct: 123 EPLLPYLYSARWLNTMVIGPPQTGKTTLLRDVARCMSQGVYSREIPSCKVGIVDERSEIA 182
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
G IP G R+ V ++ + + ++ + + P ++++DEIG ++ A
Sbjct: 183 GCVKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVH 240
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G+QL +AHG + ++++ PSL+ ++
Sbjct: 241 AGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|296133231|ref|YP_003640478.1| stage III sporulation protein AA [Thermincola potens JR]
gi|296031809|gb|ADG82577.1| stage III sporulation protein AA [Thermincola potens JR]
Length = 325
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-----LLQDL 188
H G +DN G +T+ I++ L R+ R V G+++ L+ +
Sbjct: 107 HRVGLAGRVIIDN--GKVKTIKYITS----------LNIRIAREVIGASDNIMPYLIDPI 154
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLAND------YKKRVMIVDTSSEIGGN-GDIPH 241
++ L I PP GKTT++R+I R L+N + V +VD SEI G +P
Sbjct: 155 RKEFQHTLIISPPRCGKTTLLRDIVRQLSNGVPSLGFHGVPVGVVDERSEIAGCFRGVPQ 214
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVAT 301
+G R V + + + +I + + P+V+ DEIG K + A + GI+++ T
Sbjct: 215 KDVGI--RTDVLDGCPKAEGMIMLIRSMAPKVVATDEIGRKEDIFALEEVLNAGIKILTT 272
Query: 302 AHGVTIENLIMNPSLEMLI 320
HG + L+ P+L+ L+
Sbjct: 273 VHGANMSELVQRPALKYLV 291
>gi|15895363|ref|NP_348712.1| stage III sporulation protein AA [Clostridium acetobutylicum ATCC
824]
gi|337737311|ref|YP_004636758.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
gi|384458819|ref|YP_005671239.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|15025082|gb|AAK80052.1|AE007711_9 Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum ATCC 824]
gi|325509508|gb|ADZ21144.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|336291043|gb|AEI32177.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
Length = 305
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIRE 211
++I I+N I L R+ + V+G +N + + G ++L I PP GKTT++R+
Sbjct: 101 NKIKTIKN----ISSLNIRICKEVTGCSNSIMKKIVYGNTVLNTIIISPPNCGKTTLLRD 156
Query: 212 IARVLANDYK------KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLI 263
I R ++ K+V ++D SEIG NG + IG R + ++ + ++
Sbjct: 157 ITRNISYGINSIQFRGKKVCVIDERSEIGACLNG-VNQMDIG--IRTDILDNCPKSIGIM 213
Query: 264 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
A+ + P+VI+ DEIGT + + T G++L+ T HG IE+L
Sbjct: 214 MAIRSMAPEVIICDEIGTYDDIKSILTAVNCGVKLITTIHGFGIEDL 260
>gi|291542877|emb|CBL15987.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
L2-63]
Length = 316
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 RAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASLLFIGPP 201
RAGI T +I IR+ I + R+GR G A+ L ++ +L G P
Sbjct: 112 RAGICGTAVVNNGKIVNIRD----ITSINVRIGREHKGCADSLYNKIIAVSGGVLICGAP 167
Query: 202 GVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPG-IGNARRMQVPNSEMQHK 260
GKTT++R++AR+L+ KK V ++D E+ G IG V +S + +
Sbjct: 168 CSGKTTVLRDLARLLSTKGKKNVALIDERGELAGTASGKFQNDIG---MCDVYDSYNKSE 224
Query: 261 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
++ A+ + P++I+ DEIG+K + A G++++++ H
Sbjct: 225 AMLHAIRSMAPEIIICDEIGSKEDIYAVEKSINCGVRIISSTH 267
>gi|321311927|ref|YP_004204214.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
gi|320018201|gb|ADV93187.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
Length = 307
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPE--LYELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHAT 136
+LPE M+ +SE PE E+ EV + + R P+ G S + H I
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRINR-PVELIRRGQPVYLSYAGTAEDAHLILSRL 65
Query: 137 SQVGDFAVDN--RAGIS--RTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSAN 183
S + ++ + G R HR+ + G + GL R+ R G A
Sbjct: 66 SNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAE 125
Query: 184 -LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGGN- 236
LL L Q + L IGPP GKTT++R++AR+ + K + IVD SEI G
Sbjct: 126 PLLPYLYQSSWLNTLIIGPPQTGKTTLLRDLARLSSTGKKPMLPVKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+V+++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG +I +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSISDLMKRPSLK---------RLWEERAFDRYLELS--RAKGPGTVS 288
>gi|374708800|ref|ZP_09713234.1| stage III sporulation protein AA [Sporolactobacillus inulinus CASD]
Length = 317
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVM------IVDTSSEIGGNGD-IPHPGIGN 246
S L IG P GKTT++R++AR+++ R + IVD SE+ G D +P +G
Sbjct: 144 STLLIGAPQTGKTTMLRDLARLVSEGIPDRYLPSRKTAIVDERSELAGCVDGVPQNRLGV 203
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V ++ + + ++ + + P+V+++DEIG + A G+ ++A+AHG T
Sbjct: 204 --RADVMDACPKAEGMMMMIRSMSPEVLIVDEIGGAEDTKALLEALNAGVAVMASAHGFT 261
Query: 307 IENLIMNPSLEMLIGGV---QNVTLG-DEEAHRRGVQKTVLERKG 347
+ L+ PS+ LI + V L A + G + T+L+R G
Sbjct: 262 FDQLLHRPSIRPLIEAQLFERYVILSRHNSAQKNGCRLTILDRMG 306
>gi|350266640|ref|YP_004877947.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599527|gb|AEP87315.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 307
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 82 LLPEEMRIRVSEHPELYEL-IEVV-------MDLGRKPLARFPSGDFSLSDCQITVHHIE 133
+LPE M+ +SE PE L IE V ++L RK F S ++ D + + +
Sbjct: 7 VLPESMKNALSEIPEQQWLEIEEVRIRVNRPVELIRKGQPVFLSYAGTVEDAHLILSRLS 66
Query: 134 HATSQVGDFAVDNRAGISRTLHRISA---IRNRKGAIIGL------TCRVGRAVSGSANL 184
+ + + + R HR+ + G + GL R+ R G A
Sbjct: 67 NYSMYTLEEELRKGYVTIRGGHRVGLAGRVITENGGVKGLRDITSFNIRIARQKLGIAEP 126
Query: 185 LQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKRVM-----IVDTSSEIGGN- 236
L + + L L IGPP GKTT++R++AR L++ K ++ IVD SEI G
Sbjct: 127 LLPFLYRESWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKNHMLPVKTGIVDERSEIAGCL 185
Query: 237 GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGI 296
IP G +R+ V ++ + + L+ + + P+VI++DEIG + A G+
Sbjct: 186 RGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGV 243
Query: 297 QLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFS 352
++ +AHG ++ +L+ PSL+ L +E A R ++ + KGP T S
Sbjct: 244 SVIVSAHGWSLSDLMKRPSLK---------RLWEERAFERYLELS--RAKGPGTVS 288
>gi|153810487|ref|ZP_01963155.1| hypothetical protein RUMOBE_00868 [Ruminococcus obeum ATCC 29174]
gi|149833666|gb|EDM88747.1| stage III sporulation protein AA [Ruminococcus obeum ATCC 29174]
Length = 251
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAND----YKKRVM 225
R+ V G A+ + +++G + L I PP GKTT++R++ R ++N K V
Sbjct: 67 RLAHQVQGCADEVLPYIRNGEQVYHTLIIAPPRCGKTTLLRDMIRQISNGTDRIQGKTVG 126
Query: 226 IVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+VD SE+ G IP +G R V ++ + K + + + P V+ +DE+G K +
Sbjct: 127 VVDERSELAGCYQGIPQNDLG--MRTDVLDACPKAKGMQMLLRSMSPDVVAVDELGKKED 184
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
A ++ G +L ATAHG ++E+++ P + L
Sbjct: 185 FKAVESVVHCGCKLFATAHGNSLEDILRQPFFQKL 219
>gi|326201942|ref|ZP_08191812.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
gi|325987737|gb|EGD48563.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
Length = 323
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 17/165 (10%)
Query: 169 GLTCRVGRAVSGSA-NLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK-- 222
GL R+ + V G A N+++ ++++ + + L +GPP GKTTI+R+++R+L++ ++
Sbjct: 127 GLNIRIAKEVRGCAKNIIKYIIKNSSDIYNTLIVGPPQCGKTTILRDLSRMLSSGEQEYD 186
Query: 223 ----RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVL-IEAVENHM-PQVIV 275
+V IVD SEI +P +G R V + KVL +E + M P +I+
Sbjct: 187 FNGMKVGIVDERSEIAACCKGVPQNDVG--YRTDVMDG--CPKVLGMEMLLRSMSPGIII 242
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + A + GI+++A+AHG I L M L LI
Sbjct: 243 TDEIGTHGDRDAVLKVLNSGIKIIASAHGYNITELKMREELLSLI 287
>gi|239627516|ref|ZP_04670547.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47_FAA]
gi|239517662|gb|EEQ57528.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47FAA]
Length = 332
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPG 202
+R G++ RTL + IR K I + RV V G A+ + D + DG L L I PP
Sbjct: 107 HRIGVAGRTLVQGQDIRLMK-FISFINIRVAHQVPGCADGVMDFLYDGRFLNTLVISPPR 165
Query: 203 VGKTTIIREIARVLANDYKKR---------VMIVDTSSEIGGN-GDIPHPGIGNARRMQV 252
GKTT++R+I R +++ + V +VD SE+ +P +G R V
Sbjct: 166 CGKTTLLRDIIRQVSDGWVGHSGDRVPGVSVGVVDERSELAACYQGVPQNDLGM--RTDV 223
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ + + ++ V P VI +DEIG++ +A A + G L AT HG ++E++
Sbjct: 224 LDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDAEAIEYVRNCGCALAATIHGSSLEDIRQ 283
Query: 313 NPSLEMLI 320
PS+ L+
Sbjct: 284 KPSMGGLL 291
>gi|219854458|ref|YP_002471580.1| hypothetical protein CKR_1115 [Clostridium kluyveri NBRC 12016]
gi|219568182|dbj|BAH06166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 308
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLV--QDGA-SLLFIGPPGVGKTTIIREIARVLANDYK-- 221
I + R+ R + G ++ + + +D + + I PP GKTT+IR+I R ++ K
Sbjct: 112 IASINIRICREIIGCSDSIMKFILKKDKVINTIIISPPKCGKTTLIRDIVRNISQGIKNV 171
Query: 222 ----KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
K+V ++D SEIG NG +P +G R + + + + +I A+ + P+VIV
Sbjct: 172 GLTGKKVCVIDERSEIGACFNG-MPQLNVG--MRTDILDGCPKSQGIIMAIRSMSPEVIV 228
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + + T G+ L+ T HG E+L P + ++
Sbjct: 229 CDEIGTYKDMDSILTALNSGVNLITTIHGYGTEDLYSRPVFKEIV 273
>gi|344995705|ref|YP_004798048.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963924|gb|AEM73071.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
Length = 313
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 135/273 (49%), Gaps = 40/273 (14%)
Query: 73 DIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ E+ +L+ LP E+ I+++ L+E+ E+ ++L PL ++ IT
Sbjct: 7 NTEVEKLIDKLPAEIVYTIKMAFEKRLHEICEIKINL-NCPLIVIGKREYVFDSLIITKE 65
Query: 131 HIEHATSQV--------------GDFAVD--NRAGISRTLHRISAIRNRKG---AIIGLT 171
+ S++ G F VD +R G++ + N++G +I GL
Sbjct: 66 ILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRIGVAGKFTFEN--ENKQGFVSSISGLN 123
Query: 172 CRVGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------Y 220
RV +AV +L+++V++ + L I PPG GKTT++R I R+L++
Sbjct: 124 IRVSKAVRIEPEKILKNIVKENLDSIYNTLIISPPGCGKTTLLRNIIRILSSGEGILAGR 183
Query: 221 KKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
RV+++D SEI + D GI R V + + + ++ AV + PQ+I +DE+
Sbjct: 184 GFRVVVIDERSEICAVDNDRREIGI----RTFVLDGVDKLRGILMAVRSLNPQIIAMDEL 239
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
G+ + +A ++ G++++AT H +++++ M
Sbjct: 240 GSPSDYLAVCEASKMGVKIIATMHAESVKDIYM 272
>gi|153953843|ref|YP_001394608.1| stage III sporulation protein AA [Clostridium kluyveri DSM 555]
gi|146346724|gb|EDK33260.1| Predicted stage III sporulation protein AA [Clostridium kluyveri
DSM 555]
Length = 305
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLV--QDGA-SLLFIGPPGVGKTTIIREIARVLANDYK-- 221
I + R+ R + G ++ + + +D + + I PP GKTT+IR+I R ++ K
Sbjct: 109 IASINIRICREIIGCSDSIMKFILKKDKVINTIIISPPKCGKTTLIRDIVRNISQGIKNV 168
Query: 222 ----KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
K+V ++D SEIG NG +P +G R + + + + +I A+ + P+VIV
Sbjct: 169 GLTGKKVCVIDERSEIGACFNG-MPQLNVG--MRTDILDGCPKSQGIIMAIRSMSPEVIV 225
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + + T G+ L+ T HG E+L P + ++
Sbjct: 226 CDEIGTYKDMDSILTALNSGVNLITTIHGYGTEDLYSRPVFKEIV 270
>gi|168184581|ref|ZP_02619245.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|237795310|ref|YP_002862862.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
gi|182672334|gb|EDT84295.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|229261521|gb|ACQ52554.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
Length = 307
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 170 LTCRVGRAVSGSANLLQD-LVQDGASL--LFIGPPGVGKTTIIREIARVLANDYK----- 221
L R+ R + ++ L+ +V++G L + I PP GKTTIIR+I++ +++
Sbjct: 112 LNIRICREIYNASKLVMPYIVENGQVLNTIIISPPKCGKTTIIRDISKKISDGVDALSLK 171
Query: 222 -KRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
K+V ++D SEI G NG +P +G R V ++ + + ++ A+ + P+V++ DE
Sbjct: 172 GKKVSVIDERSEIAGSYNG-VPQLDVG--LRTDVLDNCPKSEGIVMAIRSMAPEVMICDE 228
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
IGT + + G+ L+ T HG +E++ P + ++
Sbjct: 229 IGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|157692942|ref|YP_001487404.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
gi|157681700|gb|ABV62844.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
Length = 307
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRM 250
L IGPP GKTT++R+IAR+ + K K+ I+D SEI G +P G+ R+
Sbjct: 140 LIIGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFGH--RV 197
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V ++ + + L+ + + P+V+++DEIG + A G+ ++ + HG ++E++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVSIIVSVHGYSLEDV 257
Query: 311 IMNPSLEML 319
PSL+ L
Sbjct: 258 YKRPSLKPL 266
>gi|358346758|ref|XP_003637432.1| hypothetical protein MTR_085s0035 [Medicago truncatula]
gi|355503367|gb|AES84570.1| hypothetical protein MTR_085s0035 [Medicago truncatula]
Length = 111
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 557 EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ- 615
++ R+AIE +VIP GE+VELLPR S I+ QI+L++ YQL ++ G + + RL+ILP +
Sbjct: 10 KKVRLAIEYIVIPGGEAVELLPRRSEIIDRQIELVQSYQLAAEKSGTDQNTRLQILPLRL 69
Query: 616 TRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLPD 659
+ + ++S + + E S NGT TV RLP LP+
Sbjct: 70 STKRSSKSSSVSRKKRSSTSEKSAGSDGGNGT--TVTRLPILPE 111
>gi|23099349|ref|NP_692815.1| stage III sporulation protein AA [Oceanobacillus iheyensis HTE831]
gi|22777578|dbj|BAC13850.1| stage III sporulation protein AA (mutants block sporulation after
engulfment) [Oceanobacillus iheyensis HTE831]
Length = 327
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 196 LFIGPPGVGKTTIIREIARVLAN-----DYKKRVMIVDTSSEIGGN-GDIPHPGIGNARR 249
+ IGPP GKTTIIR++ R++A + K+V IVD SEI + IP +G R
Sbjct: 142 MVIGPPQSGKTTIIRDLTRMIATIDQPMNRSKKVGIVDERSEIAASLQGIPQHDVGT--R 199
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
+ ++ + + ++ V + P +IV+DEIGT + A G+ ++ TAH ++
Sbjct: 200 TDIMDACPKAEGMMMLVRSMSPDIIVVDEIGTDHDVEALLEAIHTGVTIICTAHANQWDD 259
Query: 310 LIMNPSLEMLI 320
L PS++ LI
Sbjct: 260 LNKRPSMKRLI 270
>gi|160938291|ref|ZP_02085646.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
gi|158438664|gb|EDP16421.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
Length = 357
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 173 RVGRAVSGSANLLQDLV--QDGASL--LFIGPPGVGKTTIIREIARVLANDYKKR----- 223
RV + G AN + D + DG L L I PP GKTT++R++ R +++ + +
Sbjct: 152 RVAHQIQGCANQVMDYLYSDDGRFLNTLVISPPRCGKTTLLRDMIRQVSDGPRTQRSGRR 211
Query: 224 -----VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
V +VD SE+G +P +G R V + + + ++ V + PQVI +D
Sbjct: 212 ITGVSVGVVDERSELGACYQGVPQNDLGM--RTDVLDCCPKSQGMMMLVRSMAPQVIAVD 269
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG++ + A + G L AT HG ++E+++ P++ LI
Sbjct: 270 EIGSREDVQAIEYVRNCGCSLAATIHGSSLEDIMQKPAVGELI 312
>gi|376261518|ref|YP_005148238.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
gi|373945512|gb|AEY66433.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
Length = 323
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 17/165 (10%)
Query: 169 GLTCRVGRAVSGSA-NLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAN-----D 219
GL R+ + V GSA ++++ ++++ + + L +GPP GKTTI+R+++R+L++ D
Sbjct: 127 GLNIRIAKEVKGSAKHIIKYIIKNSSDIYNTLIVGPPQCGKTTILRDLSRMLSSGEAEYD 186
Query: 220 YKK-RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVL-IEAVENHM-PQVIV 275
+ +V IVD SEI +P +G R V + KVL +E + M P +I+
Sbjct: 187 FNGMKVGIVDERSEIAACCKGVPQSDVG--YRTDVLDG--CPKVLGMEMLLRSMSPGIII 242
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + A + GI+++A+AHG I L M L LI
Sbjct: 243 TDEIGTHGDRDAILKVLNSGIKIIASAHGYNITELKMRDELLSLI 287
>gi|134298920|ref|YP_001112416.1| hypothetical protein Dred_1056 [Desulfotomaculum reducens MI-1]
gi|134051620|gb|ABO49591.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 337
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGP 200
+R GI+ + L IRN K I G R+ RAV G A+ +L L+ + + P
Sbjct: 117 HRVGITGKVLTDQGGIRNIK-YISGFNFRISRAVVGVADKVLPYLISSDGRFYHTILVSP 175
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
P GKTT++REI R L+ + V +VD SEI G +P IG R V
Sbjct: 176 PRCGKTTMLREIIRRLSEGVPELGFSGVTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 233
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
++ + ++ + + P +I DEIG + + A + G+++++T HG T+E L
Sbjct: 234 DACPKAPGMMMLLRSMGPMIIATDEIGRQEDVAALEEVLNAGVKVLSTVHGATLEELADR 293
Query: 314 PSLEML 319
P+L+ L
Sbjct: 294 PALQYL 299
>gi|225025911|ref|ZP_03715103.1| hypothetical protein EUBHAL_00147 [Eubacterium hallii DSM 3353]
gi|224956697|gb|EEG37906.1| putative stage III sporulation protein AA [Eubacterium hallii DSM
3353]
Length = 320
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 126 QITVHHIEHATSQVGDFAV----DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGS 181
+I+ + + T ++G+ + +RAG+ + + + I + RV R V G
Sbjct: 85 KISQYSVFAYTEEIGEGFITLKGGHRAGLCGKYYYRGEEKPQIKHISSINLRVAREVIGC 144
Query: 182 ANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIG 234
A + + +G + L I PPG GKTT +R+I R+L++ K V +VD SEIG
Sbjct: 145 AECIVPKLFEGNTFCHTLLISPPGCGKTTYLRDIIRLLSDGTDTITGKNVAVVDERSEIG 204
Query: 235 GNGDIPHPGIGN--ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIA 292
GIG R + + + ++ + P+++ DEIG + + A + +
Sbjct: 205 NR---TREGIGFYLGNRTDLMDHCPKAAGMLMMLRTMTPEILAADEIGGEKDIKAMAYVR 261
Query: 293 QRGIQLVATAHGVTIENLIMNPSL 316
G +L+ T HG +++++ P L
Sbjct: 262 NCGCRLLMTVHGNSMQDIFARPVL 285
>gi|302387582|ref|YP_003823404.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
gi|302198210|gb|ADL05781.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
Length = 335
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 13/185 (7%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGP 200
+R GI+ +T+ S I+ K I + R+ V G A+ +L L ++G + L I P
Sbjct: 102 HRIGIAGKTILDESGIKAMK-YISFINVRLSHQVKGCASQVLPYLYEEGREIYHTLIISP 160
Query: 201 PGVGKTTIIREIARVLANDYKKR----VMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNS 255
P GKTT++R++ R ++N + V +VD SEIG +P +G R + +
Sbjct: 161 PRCGKTTLLRDMIRQVSNGTEDHTGLTVGVVDERSEIGACYQGVPQNELGI--RTDILDC 218
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ K ++ + P+VI +DEIG++ + A + G +L+AT HG +I++L P
Sbjct: 219 CPKAKGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGCKLIATVHGNSIDDLKQKPV 278
Query: 316 LEMLI 320
L L+
Sbjct: 279 LRKLV 283
>gi|15615360|ref|NP_243663.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
gi|10175418|dbj|BAB06516.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
Length = 309
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGA-SLLFIGPPGVGKTTIIREIARVLANDYKKR- 223
I RV + G+A L+ + Q G + L IGPP GKTT++R++AR+++ + ++
Sbjct: 114 ISSFNIRVAKQKIGTAEPLISHVYQKGWLNTLLIGPPQSGKTTLLRDLARLVSVGWSRKG 173
Query: 224 -----VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
V IVD SEI +P +G R+ V + + + ++ + + P V+++D
Sbjct: 174 IPPLKVGIVDERSEIAAAVKGVPQHELGM--RVDVLDGCPKAEGMMMMIRSMSPDVLIVD 231
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG K + +A G++++ TAHG +E + P++ L+
Sbjct: 232 EIGRKEDCVAIQEALHAGVKVMTTAHGYELEEVSKRPAIRELL 274
>gi|317056392|ref|YP_004104859.1| AAA ATPase [Ruminococcus albus 7]
gi|315448661|gb|ADU22225.1| AAA ATPase [Ruminococcus albus 7]
Length = 298
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 80 LALLPEEMRIRVSEHPELYEL--IEVVMDLGRKPLARFPSGDFS------------LSDC 125
L LLP + +S+ P+ +L E+ + GR G F+ L+ C
Sbjct: 11 LKLLPVYIADIISKLPQRVQLKICEIRLRAGRPFTITLSDGTFTPDNNICVSSKDLLTVC 70
Query: 126 QITVHHIEHAT-SQVGD-FAV---DNRAGISRTLH----RISAIRNRKGAIIGLTCRVGR 176
H++ SQ+ + +AV R GIS T +I ++N I L R+ R
Sbjct: 71 SRAFGFSMHSSISQLCEGYAVYENGCRIGISGTACADNGKIVNVKN----ITSLNIRIPR 126
Query: 177 AVSGSANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIG 234
+ G A + D A SLL G P GKTT +R++ R+ + Y R ++D EI
Sbjct: 127 EIKGCAGSIFDRFMSAAPRSLLIAGSPSSGKTTFLRDLTRLCGHRY--RTSLIDERGEIA 184
Query: 235 GN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
+ G IP IG V + + + + AV PQVIV DEIG+ + +
Sbjct: 185 ASVGGIPANDIGIM--TDVFDRYPRKEAVQTAVRVMSPQVIVCDEIGSAEDITSLEYAVD 242
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLI 320
G +L+A+ H + +LI P++ L+
Sbjct: 243 SGAELIASCHCSGLSDLIHKPNISKLV 269
>gi|89099238|ref|ZP_01172116.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
gi|89086084|gb|EAR65207.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
Length = 356
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIA 213
++ AIR+ I RV R G+A+ L + L + +GPP GKTT++R+IA
Sbjct: 149 KVKAIRD----ISSFNIRVAREKIGTADRLIPYLYSSGWLHTMVVGPPQTGKTTLLRDIA 204
Query: 214 RVLANDYK------KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAV 266
R++++ ++ IVD SEI G+ IP G R+ V ++ + + ++ +
Sbjct: 205 RIVSSGAANPAIAAQKAGIVDERSEIAGSVSGIPQMTFGP--RVDVLDACPKAEGMMMMI 262
Query: 267 ENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ P V+++DEIG + + A GI+L+ T HG + E + P+L+ ++
Sbjct: 263 RSMSPDVLLVDEIGRQEDGEAIMEAVHAGIKLMMTTHGRSWEEIKNRPTLKQIL 316
>gi|125973363|ref|YP_001037273.1| stage III sporulation protein spoIIIAA [Clostridium thermocellum
ATCC 27405]
gi|256005469|ref|ZP_05430432.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281417563|ref|ZP_06248583.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|385778725|ref|YP_005687890.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|419722089|ref|ZP_14249238.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
gi|419724836|ref|ZP_14251893.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|125713588|gb|ABN52080.1| stage III sporulation protein AA [Clostridium thermocellum ATCC
27405]
gi|255990609|gb|EEU00728.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281408965|gb|EFB39223.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|316940405|gb|ADU74439.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|380771725|gb|EIC05588.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|380781843|gb|EIC11492.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
Length = 336
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 29/236 (12%)
Query: 147 RAGI-SRTLHRISAIRNRKGAIIGLTCRVGRAVSG-SANLLQDLVQDGASL---LFIGPP 201
R GI R + ++N K + GL R+ R ++G S+ +L+ ++ + L + PP
Sbjct: 118 RVGIVGRVVLNGDTVKNIKD-VSGLNIRISREITGCSSKVLKYIISSEKQVYNTLIVSPP 176
Query: 202 GVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPN 254
GKTT++R+I R +++ ++ +V +VD SEI +P +G R V +
Sbjct: 177 QCGKTTLLRDITRAISDGVEEMGFKGVKVGVVDERSEIAACYKGVPQNRVGT--RTDVLD 234
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
+ + +I + + P VIV DEIG K + A + G+++++TAHG I L
Sbjct: 235 ACPKQIGMIMMLRSMSPDVIVTDEIGNKGDKDALIQVLNAGVKVISTAHGYNISELKSRK 294
Query: 315 SLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHHSLE 370
+ LI +E+ R + + RKGP T EI+ T++ + + E
Sbjct: 295 EVLSLI---------EEKMFERYI--VLSARKGPGTVE---EIIDGTDMSILYKGE 336
>gi|288870190|ref|ZP_06113246.2| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
gi|288868079|gb|EFD00378.1| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
Length = 356
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLANDYKKR--- 223
+ R+ V G A+ + + D +L I PP GKTT++R++ R ++N +
Sbjct: 148 INVRLSHQVKGCASPVLPYLYDSEEILHTLIISPPRCGKTTLLRDLIRQISNGTEAHPGM 207
Query: 224 -VMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
V +VD SEIG IP +G R + + + + ++ + P+VI +DEIG+
Sbjct: 208 TVGVVDERSEIGACYQGIPQNELGI--RTDILDCCPKARGMMMLIRTMSPRVIAVDEIGS 265
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ + A + G +L+AT HG +I++L P L L+
Sbjct: 266 REDLEAVEYVMNCGCKLIATVHGSSIDDLKQKPVLRRLV 304
>gi|358062401|ref|ZP_09149047.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
gi|356699530|gb|EHI61044.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
Length = 320
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPP 201
+R GI+ +T+ IR+ K + + R+ V G A+ + + G + L I PP
Sbjct: 102 HRIGIAGKTIVDDKGIRSMK-YVSFINVRLSHQVKGCASAVLPYLYHGGDIFHTLVISPP 160
Query: 202 GVGKTTIIREIARVLANDYKKR----VMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSE 256
GKTT++R++ R ++N K V ++D SEIG +P +G R + +
Sbjct: 161 RCGKTTLLRDMIRQISNGTGKEPGMTVGVIDERSEIGACYQGVPQNELGI--RTDILDCC 218
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + ++ + P+VI +DEIG++ + A + G +L+AT HG ++E++ P L
Sbjct: 219 PKARGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGCKLIATVHGNSVEDIKQKPVL 278
Query: 317 EMLI 320
L+
Sbjct: 279 RKLV 282
>gi|337746932|ref|YP_004641094.1| stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
gi|336298121|gb|AEI41224.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
Length = 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 173 RVGRAVSGSA-----NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ R G+A +LL+ + L I PP +GKTT++R++AR+L++ +
Sbjct: 128 RIAREWKGAAAGVAPHLLEPGTRRLCRTLVISPPQLGKTTLVRDLARLLSSGSAEAGIGG 187
Query: 223 ---RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+V IVD SEI +P +G R V + + + ++ + + P+V++ DE
Sbjct: 188 RSFKVGIVDERSEIAACVRGVPRFDVGP--RTDVLDGCPKAEGMMMMIRSMSPEVLIADE 245
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGV 323
IG +A A GI L+ATAHG ++++ P L E+L GGV
Sbjct: 246 IGRSEDAAAIHEALHAGIGLIATAHGRDVDDVRRRPILKELLAGGV 291
>gi|374296405|ref|YP_005046596.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
gi|359825899|gb|AEV68672.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
Length = 340
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 158 SAIRNRKGAIIGLTCRVGRAVSG-SANLLQDLVQDGASL---LFIGPPGVGKTTIIREIA 213
+ I+N K I GL RV R V G S+ +L+ +VQ + L I PP GKTTI+R+IA
Sbjct: 130 TGIKNLK-DISGLNIRVSREVRGCSSEILKYIVQGENEIYNTLIISPPKCGKTTILRDIA 188
Query: 214 RVLANDYKK------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
R +++ + +V IVD SEI G P +G R V ++ + +
Sbjct: 189 RSISDGVAQIGLKGLKVGIVDERSEIAACFKGS-PQKQVG--VRTDVLDACPKQLGMSML 245
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ + P VI+ DEIG+ + A + G+++V TAHG +I L
Sbjct: 246 LRSMSPDVIITDEIGSSGDKEALMQVINAGVKIVTTAHGYSISQL 290
>gi|297606843|ref|NP_001059076.2| Os07g0187400 [Oryza sativa Japonica Group]
gi|255677572|dbj|BAF20990.2| Os07g0187400, partial [Oryza sativa Japonica Group]
Length = 123
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 557 EEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILPFQ- 615
+EAR+AIE +VIP GE VELLPR S I++ Q++L+ YQL + G + ++RL+ILP +
Sbjct: 24 QEARLAIEYIVIPGGEPVELLPRCSEIVARQLELVESYQLLAETFGTDSNSRLQILPVKI 83
Query: 616 TRRDEPRNSGETFDEDIEFDEFPGSSSNSNGTRYTVDRLPFLP 658
T++ + S + + D S N G+ ++ RLPFLP
Sbjct: 84 TKKSSSKGSAGSMPKQGSSDLI--VSDNGGGSSFS--RLPFLP 122
>gi|402815122|ref|ZP_10864715.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
gi|402507493|gb|EJW18015.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
Length = 335
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 153 TLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA-----SLLFIGPPGVGKTT 207
T R+S +R+ I G R+ R V+G A+ + + D A S L + PP GKTT
Sbjct: 113 TQGRVSHLRD----ITGFNLRIAREVAGIADEIIPQLLDFAHRTIYSTLVVSPPQHGKTT 168
Query: 208 IIREIARVLAND--------YKK-RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEM 257
++R++AR +++ +K +V IVD SEI G +P +G R V +
Sbjct: 169 MLRDMARAVSSGCWNHPQAVWKALKVGIVDERSEIAGCMKGVPSYNLGY--RTDVIDGCP 226
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
+ + L+ + + P V+V+DE G + + A G++++A+ HG +E+++ P L
Sbjct: 227 KAEGLMMFIRSMSPDVLVVDEFGREEDYDAMQEAIHAGVRMIASVHGSDVEDILRRPGLA 286
Query: 318 MLI--GGVQNVTL 328
L+ GG + +
Sbjct: 287 SLLDEGGFSRIVV 299
>gi|297616604|ref|YP_003701763.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
gi|297144441|gb|ADI01198.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
Length = 326
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 169 GLTCRVGRAVSGSAN-LLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLANDYKK-R 223
GL RV R + G A + L+ G +L + PP GKTT++R++ R+ ++
Sbjct: 131 GLAFRVAREMVGCAEPIASRLIVTGRRILNTLIVSPPRCGKTTLLRDLTRLYSDGPANLN 190
Query: 224 VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
V+++D SEI IP +GN R V + + ++ AV + P ++V+DEIG
Sbjct: 191 VVVIDERSEIAACYQGIPQLNVGN--RTDVLDGCPKALGMMMAVRSLSPHLVVVDEIGRP 248
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+A A G+ ++ATAHG +E++ P + L+
Sbjct: 249 ADAEALQECVNAGVSVIATAHGTDLEDISRRPIMAGLL 286
>gi|379720795|ref|YP_005312926.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
gi|378569467|gb|AFC29777.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
Length = 342
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 173 RVGRAVSGSA-----NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ R G+A +LL+ + L I PP +GKTT++R++AR+L++ +
Sbjct: 136 RIAREWKGAAAGVAPHLLEPGTRRLCRTLVISPPQLGKTTLVRDLARLLSSGSAEAGIGG 195
Query: 223 ---RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+V IVD SEI +P +G R V + + + ++ + + P+V++ DE
Sbjct: 196 RSFKVGIVDERSEIAACVRGVPRFDVGP--RTDVLDGCPKAEGMMMMIRSMSPEVLIADE 253
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGV 323
IG +A A GI L+ATAHG ++++ P L E+L GGV
Sbjct: 254 IGRSEDAAAIHEALHAGIGLIATAHGRDVDDVRRRPILKELLAGGV 299
>gi|357051938|ref|ZP_09113056.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
gi|355387206|gb|EHG34232.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
Length = 357
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 173 RVGRAVSGSANLLQDLV--QDGASL--LFIGPPGVGKTTIIREIARVLANDYKKR----- 223
RV V G AN + + + DG L L I PP GKTT++R+I R +++ + +
Sbjct: 152 RVAHQVQGCANQVMEYLYSDDGRFLNTLVISPPRCGKTTLLRDIIRQVSDGPRTQRAGRR 211
Query: 224 -----VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
V +VD SE+G +P +G R + + + + ++ V + PQVI +D
Sbjct: 212 IPGVSVGVVDERSELGACYQGVPQNDLGM--RTDILDCCPKSQGMMMLVRSMAPQVIAVD 269
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG++ + A + G L AT HG ++E+++ P++ LI
Sbjct: 270 EIGSREDVRAIEYVRNCGCSLAATIHGSSLEDIMQKPAVGELI 312
>gi|291536399|emb|CBL09511.1| stage III sporulation protein AA [Roseburia intestinalis M50/1]
Length = 318
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK----RVM 225
RV G A + ++DG S+ L + PG GKTT +R+ R L+N + ++
Sbjct: 133 RVAHEKKGCAEKILPFLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKIC 192
Query: 226 IVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+VD SEI + IP +G R V + + + ++ + + PQ+I +DE+G K +
Sbjct: 193 VVDERSEIAACHLGIPQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKD 250
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A A G++++ T H T+E L P L+ +
Sbjct: 251 FQAVEQAACSGVRILGTVHADTVEELWEKPYLKKWM 286
>gi|240145623|ref|ZP_04744224.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
gi|257202285|gb|EEV00570.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
Length = 318
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK----RVM 225
RV G A + ++DG S+ L + PG GKTT +R+ R L+N + ++
Sbjct: 133 RVAHEKKGCAEKILPFLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKIC 192
Query: 226 IVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+VD SEI + IP +G R V + + + ++ + + PQ+I +DE+G K +
Sbjct: 193 VVDERSEIAACHLGIPQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKD 250
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A A G++++ T H T+E L P L+ +
Sbjct: 251 FQAVEQAACSGVRILGTVHADTVEELWEKPYLKKWM 286
>gi|160893216|ref|ZP_02074004.1| hypothetical protein CLOL250_00762 [Clostridium sp. L2-50]
gi|156865299|gb|EDO58730.1| stage III sporulation protein AA [Clostridium sp. L2-50]
Length = 337
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDY----KKRVMIVDTSSEIGG-NGDIPHPGIGNARRM 250
L I PP GKTT++R++ R+L++ + + +VD SEIG +P IG R
Sbjct: 157 LIISPPRCGKTTLLRDMIRMLSDGFPGFKGNTIGVVDERSEIGACYKGVPQNDIGI--RT 214
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ + + ++ + + PQ+I +DEIG++ + A ++ G +L+AT HG +I+++
Sbjct: 215 DILDCCPKSYGMLMLIRSMSPQIIAVDEIGSRDDIDAIYSVINCGCKLIATVHGNSIDDI 274
Query: 311 IMNPSLEMLI 320
P L L+
Sbjct: 275 RNRPGLRKLV 284
>gi|291538735|emb|CBL11846.1| stage III sporulation protein AA [Roseburia intestinalis XB6B4]
Length = 269
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK----RVM 225
RV G A + ++DG S+ L + PG GKTT +R+ R L+N + ++
Sbjct: 84 RVAHEKKGCAEKILPFLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKIC 143
Query: 226 IVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+VD SEI + IP +G R V + + + ++ + + PQ+I +DE+G K +
Sbjct: 144 VVDERSEIAACHLGIPQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKD 201
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A A G++++ T H T+E L P L+ +
Sbjct: 202 FQAVEQAACSGVRILGTVHADTVEELWEKPYLKKWM 237
>gi|251796305|ref|YP_003011036.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
gi|247543931|gb|ACT00950.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
Length = 350
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 50/292 (17%)
Query: 76 LGRLLALLPEEMRIRVSEHPE-LYELIEVV-------MDLGRKPLARFPSGDFSL---SD 124
L R++ LLP E++ + + PE E +E + ++LG + +RF + D +L SD
Sbjct: 2 LDRVIHLLPPELKAVLEKLPESAMEHLEEIRIREGRPLELGIRGQSRFAASDGTLRAGSD 61
Query: 125 ---------C-----QITVHHI----EHATSQVGDFAVDNRAGIS-RTLHRISAIRNRKG 165
C +IT H + E A +R G++ RT+ ++R +
Sbjct: 62 GAFKPTADTCRKLLEKITNHSLYAMEEELKRGFITVAGGHRIGLAGRTILDGGSVRGIR- 120
Query: 166 AIIGLTCRVGRAVSGSA-NLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVL---- 216
I G R+ R V GSA NLL L+ S L + PP GKTTI+R+IAR +
Sbjct: 121 DIGGFNIRIAREVVGSARNLLPKLLDKNRKTVHSTLILAPPQQGKTTIVRDIARSISYGH 180
Query: 217 -------ANDYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
A ++V IVD SEI IP +G R + ++ + + ++ + +
Sbjct: 181 WGLFENAAGWAGRKVGIVDERSEIAACVRGIPTFDVGP--RTDIMDACPKAEGMMMLLRS 238
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
P+V++ DEIG + A + GI ++ATAH +++ P L+ L+
Sbjct: 239 MSPEVVIADEIGRPEDGEAIREASHAGISVIATAHAYDLQDAKGRPVLQQLL 290
>gi|169335050|ref|ZP_02862243.1| hypothetical protein ANASTE_01456 [Anaerofustis stercorihominis DSM
17244]
gi|169257788|gb|EDS71754.1| stage III sporulation protein AA [Anaerofustis stercorihominis DSM
17244]
Length = 304
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIRE 211
+++ +RN I L R+ R + G++NL+ + + + + L I PP VGKTT++R+
Sbjct: 105 NKVIGLRN----INSLNIRISRQIIGASNLVLNYILNKGEVYNTLIISPPKVGKTTLLRD 160
Query: 212 IARVLAND----YKKRVMIVDTSSEIGGNGD-IPHPGIGNARR-MQVPNSEMQHKVLIEA 265
I+RV++ + KRV IVD EI D + IG+ ++ N +L+ A
Sbjct: 161 ISRVISTNKGDFVGKRVCIVDERKEIASLHDGVNELNIGDKTDVLEGINKSDGMNMLVRA 220
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
+ P+VI+ DEIG + A G++++++AHG +++++
Sbjct: 221 MS---PEVIITDEIGKIDDISALENSVLSGVKVISSAHGKDMKDIL 263
>gi|167747013|ref|ZP_02419140.1| hypothetical protein ANACAC_01725 [Anaerostipes caccae DSM 14662]
gi|167653973|gb|EDR98102.1| stage III sporulation protein AA [Anaerostipes caccae DSM 14662]
Length = 310
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 170 LTCRVGRAVSGSA-NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKRVMI 226
L RV V G A + + +DG L L I PPG GKTT++R++ R+ A+D + V +
Sbjct: 126 LNIRVAHEVIGCAEGIFEHCTKDGQLLPVLIISPPGRGKTTLLRDMIRI-ASDGGETVGV 184
Query: 227 VDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEA 285
VD SEI + +P +G R V + + + ++ V + P VI +DEIG K +
Sbjct: 185 VDERSEIAASYMGVPQNKVGI--RTDVMDGCPKSEGMMMLVRSMAPNVIAVDEIGKKEDV 242
Query: 286 MAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGVQNVTLGDEEAHRRGVQKTVLE 344
A A G L+AT HG +E L P + EM+ V + E + G K +L
Sbjct: 243 DAMLYSAYCGCTLMATIHGKDMEELKKVPYVGEMMERKVFKRYVVLSEQGKAGTVKEILN 302
Query: 345 RKGPSTFS 352
+G +
Sbjct: 303 EEGVRLYG 310
>gi|404330166|ref|ZP_10970614.1| stage III sporulation protein AA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 315
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 170 LTCRVGRAVSGSANLLQD-LVQD--GASLLFIGPPGVGKTTIIREIARVLANDYKKRVM- 225
R+ R G+ L D L QD S LFIG P GKTT++R++AR ++N +R +
Sbjct: 117 FNVRIARQKIGAGRPLIDYLYQDHRWLSTLFIGAPQTGKTTLLRDLARFISNGLPERGIP 176
Query: 226 -----IVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
I+D SEI G G +P +G R V ++ + + ++ + + P V+ +DEI
Sbjct: 177 GEKTGIIDERSEIAGCVGGVPQNDVGP--RTDVLDACPKAEGMMMMIRSMSPGVLAVDEI 234
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
G + + A G+ ++A+AH +++ L PS
Sbjct: 235 GGREDMDALVEALNAGVTVLASAHAGSLDELRKRPSF 271
>gi|331091290|ref|ZP_08340131.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404737|gb|EGG84276.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
Length = 307
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLA--NDYKKRV--M 225
RV V G A+ L + + L I PP GKTT++R++ R ++ N + K V
Sbjct: 117 RVAHEVRGCADKLFPYITKERQICHTLIISPPRCGKTTLLRDMIRQISDGNRWVKGVPVG 176
Query: 226 IVDTSSEIGGNGDIPHPGIGNAR-----RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
+VD SE+GG +G A+ R + + + ++ + + PQVI +DEIG
Sbjct: 177 VVDERSELGG------CYMGTAQNELGIRTDILDCCPKADGMLMLIRSMAPQVIAVDEIG 230
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ E A G +++ATAHGV++E + P E LI
Sbjct: 231 AREEIRAIEYALHCGCKMLATAHGVSMEEMKKKPFFEQLI 270
>gi|302392502|ref|YP_003828322.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
gi|302204579|gb|ADL13257.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
Length = 330
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 169 GLTCRVGRAVSGSAN------LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK 222
GL R+ + + G+A+ + D Q + L I PP GKTT++R++ R L+ +
Sbjct: 128 GLNIRISQEIIGAADEVIGEVISNDQSQSIYNTLIISPPQCGKTTLLRDLIRQLSTGLPE 187
Query: 223 ------RVMIVDTSSEIGGN--GDIPHP-GIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
+V +VD E+GG+ G + + GI P S+ +I + P+V
Sbjct: 188 QNFSGLKVGVVDERGELGGSYQGVVQNQLGIRTDLLANCPKSQG----MILLIRAMSPEV 243
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
IV DEIG++ + A G+++V + HG ++ + P+LE L+G
Sbjct: 244 IVTDEIGSRQDVQAICEAVNAGVKIVTSVHGRDLKEIKQRPNLEKLLG 291
>gi|386723401|ref|YP_006189727.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
gi|384090526|gb|AFH61962.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
Length = 334
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 173 RVGRAVSGSA-NLLQDLVQDG----ASLLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ R G+A + L++ G L I PP +GKTT++R++AR+L++ +
Sbjct: 128 RIAREWKGAAAGVAPPLLEPGPRRLCRTLVISPPQLGKTTLVRDLARLLSSGSAEAGIGG 187
Query: 223 ---RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+V IVD SEI +P +G R V + + + ++ + + P+V++ DE
Sbjct: 188 RSFKVGIVDERSEIAACVRGVPRFDVGP--RTDVLDGCPKAEGMMMMIRSMSPEVLIADE 245
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGV 323
IG +A A GI L+ATAHG ++++ P L E+L GGV
Sbjct: 246 IGRSEDAAAIHEALHAGIGLIATAHGRDVDDVRRRPILKELLAGGV 291
>gi|28211253|ref|NP_782197.1| stage III sporulation protein AA [Clostridium tetani E88]
gi|28203693|gb|AAO36134.1| stage III sporulation protein AA [Clostridium tetani E88]
Length = 303
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK---- 222
L R+ R V+G ++ + + + + + I PP GKTT++R+IA+ L+N K
Sbjct: 112 LNIRICREVAGCSDKILPYILKSSMVENTIIISPPNCGKTTLLRDIAKKLSNGISKLDLK 171
Query: 223 --RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+V ++D SEI NG +P +G R V +S + + ++ A+ + P VIV DE
Sbjct: 172 GMKVCVIDERSEIASCVNG-VPQLNLG--LRTDVLDSCPKSQGIMMAIRSMSPDVIVCDE 228
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN 325
IG+ + + G++L+ T HG ++++ E+ G ++N
Sbjct: 229 IGSTEDIESIIKAMNSGVKLITTVHGYDVKDIY---EREVFKGAIEN 272
>gi|435853281|ref|YP_007314600.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
gi|433669692|gb|AGB40507.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
Length = 317
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
H VG D RA I R H I L R + V G+AN + + + +G+
Sbjct: 109 HRVGLVGQVIRD-RAKIKRIKH-----------IAALNIRFCQEVIGAANGVINQIINGS 156
Query: 194 S----LLFIGPPGVGKTTIIREIARVLANDYKK-----RVMIVDTSSEIGGNGDIPHPGI 244
+ L I PP GKTT++R++ R ++N K +V +VD SEIGG + G+
Sbjct: 157 NDIYNTLIISPPRCGKTTLLRDLVRQISNGIPKQFNGLKVGVVDERSEIGG----AYQGV 212
Query: 245 GNAR---RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK------LEAMAASTIAQRG 295
+ R + + + + ++ + + P VIV DEIGTK LEA+ A G
Sbjct: 213 AQNQIGIRTDLLDRAPKPEGILLLIRSMSPNVIVTDEIGTKEDVDILLEALNA------G 266
Query: 296 IQLVATAHGVTIENLIMNPSLEML 319
++++ T HG + + PSL L
Sbjct: 267 VRVITTVHGSNLAEVKSRPSLAKL 290
>gi|159488481|ref|XP_001702238.1| hypothetical protein CHLREDRAFT_154234 [Chlamydomonas reinhardtii]
gi|158271275|gb|EDO97098.1| predicted protein [Chlamydomonas reinhardtii]
Length = 205
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTL-GDEEAHRRGVQKTV 342
EA AA +I+QRG+ LVATAHG + +++ NP L L+GG+Q V L G KT
Sbjct: 2 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 61
Query: 343 LERKGPSTFSCAVEIVSKTELRVHHSLEATVDAILSG 379
ER+G TF LR+ + A+VDA+L G
Sbjct: 62 TERRGEPTF----------RLRLRPDVAASVDALLGG 88
>gi|253576304|ref|ZP_04853634.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844197|gb|EES72215.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 343
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 23/195 (11%)
Query: 143 AVDNRAGIS-RTL---HRISAIRNRKGAIIGLTCRVGRAVSGSAN-----LLQDLVQDGA 193
A +R G++ RTL R+ +R+ I G R+ R + G A+ LL +
Sbjct: 109 AGGHRIGLAGRTLLSGGRVEHLRD----ISGFNVRIAREIRGIADPILPRLLDFRHKTVY 164
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKK---------RVMIVDTSSEIGGNGDIPHPGI 244
L + PP GKTT+IR++AR +++ +V ++D SEI G+ PG
Sbjct: 165 HTLILSPPQQGKTTLIRDLARQISSGTWGHPEASWPGLKVAVIDERSEIAGS-KRGVPGF 223
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
R V + + + ++ + + P VI++DEIG +A A + G++++ATAHG
Sbjct: 224 DMGPRTDVMDGCPKAEGIMMMIRSMSPDVIIVDEIGRPEDAEALAEALHAGVRVIATAHG 283
Query: 305 VTIENLIMNPSLEML 319
++++L P+L L
Sbjct: 284 SSVDDLAARPALSRL 298
>gi|408356526|ref|YP_006845057.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
gi|407727297|dbj|BAM47295.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
Length = 322
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDY----KKRVMIVDTSSEIGG--NGDIPHPGIGNARR 249
L +GPP GKTT+IR+I+R++ + K+V IVD SEI G NG IP +G +R
Sbjct: 143 LIVGPPQSGKTTLIRDISRLIGTGWGHMEAKKVGIVDERSEIAGSRNG-IPFYQVG--KR 199
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
V ++ + + ++ + + P +I++DEIG+ + A + + G+ LV T H + ++
Sbjct: 200 TDVLDNCPKSEGMMLMIRSMSPDIIIVDEIGSVRDIEAIQEVIRSGVGLVCTLHSDSYQS 259
Query: 310 LIMNPSLEMLI 320
+ + L+ +I
Sbjct: 260 IKQSKHLKPII 270
>gi|164688622|ref|ZP_02212650.1| hypothetical protein CLOBAR_02267 [Clostridium bartlettii DSM
16795]
gi|164603035|gb|EDQ96500.1| stage III sporulation protein AA [Clostridium bartlettii DSM 16795]
Length = 321
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSG-SANLLQDLVQDG 192
H VG ++N G + + IS+ L RV R + G S +L ++++
Sbjct: 103 HRIGIVGKVIIEN--GQVKNIKHISS----------LNIRVSREIKGCSKKVLPHIIKNK 150
Query: 193 ASL---LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGNG-DIPHP 242
+ + I PP GKTTI+R+I R ++N ++ +V ++D +EI G+ +
Sbjct: 151 NQINNTIIISPPQCGKTTILRDIVRNISNGNREYGFSGVKVALIDERNEIAGSCMGVAQL 210
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R V + + ++ + + P VIV DEIG + E A T G+ L+ T
Sbjct: 211 DVG--MRTDVMETCPKDLGIMMVLRSMSPNVIVTDEIGNEKEIKALYTALNGGVSLITTV 268
Query: 303 HGVTIENLIMNPSLEMLIGG 322
HG +IE+++ L+ L+ G
Sbjct: 269 HGDSIEDILHRTELKRLLDG 288
>gi|313114131|ref|ZP_07799683.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623540|gb|EFQ06943.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 297
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 169 GLTCRVGRAVSGSA--NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMI 226
GL R+ RAV LL L + +L +G P GKTT++R+IAR LA ++R +
Sbjct: 124 GLNLRIARAVPVQLPNELLVQLKKHFIGMLVVGEPDSGKTTLLRQIARELAG-MQRRACV 182
Query: 227 VDTSSEIGGNGD---IPH----PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
VD EI GD +P GI R +Q+ A+ PQVI++DE+
Sbjct: 183 VDERCEIFPPGDSEKMPPLDLLSGIPKERAVQM------------ALRTLSPQVILLDEL 230
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
GT E A G+ VA+ H ++E P ++ L
Sbjct: 231 GTLAETAALEQGFYSGVDFVASVHAASVEEAARRPQVQAL 270
>gi|342732644|ref|YP_004771483.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417959181|ref|ZP_12602037.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|417965028|ref|ZP_12606647.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|417968209|ref|ZP_12609250.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|418372898|ref|ZP_12964990.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
gi|342330099|dbj|BAK56741.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380334058|gb|EIA24534.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|380339205|gb|EIA27984.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|380340147|gb|EIA28776.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|380342567|gb|EIA31012.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
Length = 266
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 23/186 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
H G++ +N G + L IS+ L R+ + V G + + G
Sbjct: 57 HRVGITGEWIFEN--GQVKYLKNISS----------LNIRICKEVMGFGRKFINYIYKGG 104
Query: 194 SLL---FIGPPGVGKTTIIREIARVLAN-----DYKKRVMIVDTSSEIGGN-GDIPHPGI 244
+L I PP GKTT++R+++++++N + +V ++D SEI + IP +
Sbjct: 105 EILNTLIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDV 164
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G R V ++ ++ K +I A+ + P+VI+ DEIGT+ + + G+ +++T HG
Sbjct: 165 G--IRTDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHG 222
Query: 305 VTIENL 310
+ E+
Sbjct: 223 SSEEDF 228
>gi|417961837|ref|ZP_12604170.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
gi|380332103|gb|EIA23008.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
Length = 186
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLAN-----DYK 221
L R+ + V G + + G +L I PP GKTT++R+++++++N +
Sbjct: 1 LNIRICKEVMGFGRKFINYIYKGGEILNTLIISPPKCGKTTLLRDLSKIISNGDSPLNRG 60
Query: 222 KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
+V ++D SEI + IP +G R V ++ ++ K +I A+ + P+VI+ DEIG
Sbjct: 61 FKVSVIDERSEIAASFRGIPQLDVG--IRTDVYDNCLKSKGIILAIRSMAPEVIICDEIG 118
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENL 310
T+ + + G+ +++T HG + E+
Sbjct: 119 TREDFESVLIAYNSGVSIISTIHGSSEEDF 148
>gi|384456035|ref|YP_005668630.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|418015948|ref|ZP_12655513.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506283|gb|EGX28577.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984378|dbj|BAK80054.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 271
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 23/186 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
H G++ +N G + L IS+ L R+ + V G + + G
Sbjct: 62 HRVGITGEWIFEN--GQVKYLKNISS----------LNIRICKEVMGFGRKFINYIYKGG 109
Query: 194 SLL---FIGPPGVGKTTIIREIARVLAN-----DYKKRVMIVDTSSEIGGN-GDIPHPGI 244
+L I PP GKTT++R+++++++N + +V ++D SEI + IP +
Sbjct: 110 EILNTLIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDV 169
Query: 245 GNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
G R V ++ ++ K +I A+ + P+VI+ DEIGT+ + + G+ +++T HG
Sbjct: 170 G--IRTDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHG 227
Query: 305 VTIENL 310
+ E+
Sbjct: 228 SSEEDF 233
>gi|365157824|ref|ZP_09354069.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
gi|363622494|gb|EHL73653.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
Length = 309
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 170 LTCRVGRAVSG-SANLLQDLVQDGAS-LLFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ R + G S L+ L + G + IG P GKTT++R+IARV++ +
Sbjct: 112 FNIRIAREIIGISRPLIPFLFEKGWKHTMIIGAPQTGKTTLLRDIARVVSTGCDQLNIPS 171
Query: 223 -RVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
+V IVD SEI G IP G R+ V ++ + + ++ + + P V+V+DEIG
Sbjct: 172 LKVGIVDERSEIAGCMFGIPQLSFGP--RVDVLDACPKAEGMMMMIRSMSPDVLVVDEIG 229
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + MA G++LV T HG ++E + P L
Sbjct: 230 REEDRMAVLEAVNAGVKLVMTTHGDSLEEIQKRPLL 265
>gi|291562681|emb|CBL41497.1| stage III sporulation protein AA [butyrate-producing bacterium
SS3/4]
Length = 323
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIREIARVLAND----YKK 222
L RV V G A + + DG + L I PPG GKTT++R++ R L+ K
Sbjct: 132 LNIRVAHEVKGCAKNVLPYLMDGETFLDTLLISPPGAGKTTLLRDLIRELSCGGTWGAGK 191
Query: 223 RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
V +VD SEI G I +G R V + + + ++ + + PQV+ +DE G
Sbjct: 192 NVSVVDERSEIAACFGGIAQCDLGP--RTDVMDGCPKSEGMLMMLRSMAPQVLAVDEAGG 249
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+ E +A G +++AT HG + +++ P+ L
Sbjct: 250 EGEILAMKYGMNCGCRILATVHGADVGDIMKRPAWREL 287
>gi|163816778|ref|ZP_02208141.1| hypothetical protein COPEUT_02968 [Coprococcus eutactus ATCC 27759]
gi|158448035|gb|EDP25030.1| stage III sporulation protein AA [Coprococcus eutactus ATCC 27759]
Length = 294
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 155 HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL---FIGPPGVGKTTIIRE 211
+RI IR+ I L RV + G +N + + G LL + P GKTT++R+
Sbjct: 98 NRIKCIRH----ISFLNIRVAHEIKGCSNRVMQYIVSGGRLLNTLIVSAPCHGKTTLLRD 153
Query: 212 IARVLANDYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHM 270
I RV++N V +VD SEI IP +G R V + + ++ V
Sbjct: 154 IIRVVSNS-GTTVGVVDERSEIAACYKGIPQNDVGI--RTDVLDCCPKAAGMMMLVRTMA 210
Query: 271 PQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQN----- 325
P++I +DEIG + A + G +L+ATAHG +I+++ + L V+N
Sbjct: 211 PELIAVDEIGGPADVDAIFGVVNCGCRLLATAHGYSIDDVRERTGIRRL---VENRVFER 267
Query: 326 -VTLGDEEA 333
V LG E+A
Sbjct: 268 YVVLGGEKA 276
>gi|366166835|ref|ZP_09466590.1| stage III sporulation protein AA [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 17/179 (9%)
Query: 147 RAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSG-SANLLQDLVQ---DGASLLFIGPP 201
R GI+ R + + I+N + I GL R+ R V G S+ +L+ +VQ D + L + PP
Sbjct: 118 RVGITGRVVLEGTQIKNIR-DISGLNMRISREVYGCSSKILRYIVQGDNDVYNTLIVSPP 176
Query: 202 GVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVP 253
GKTTI+R++AR L++ +V +VD SEI G P +G R V
Sbjct: 177 KCGKTTILRDLARNLSDGVDGFAIRGLKVGVVDERSEIAACFKGS-PQKEVGA--RTDVL 233
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
++ + + + + P VI+ DEIG + A + G++++ TAHG I L M
Sbjct: 234 DACPKQLGMSMMLRSMSPDVIITDEIGCNGDKEALMQVLNAGVKIITTAHGFNISELKM 292
>gi|315646315|ref|ZP_07899435.1| stage III sporulation protein AA [Paenibacillus vortex V453]
gi|315278514|gb|EFU41830.1| stage III sporulation protein AA [Paenibacillus vortex V453]
Length = 332
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIR 210
R+ IR+ I G R+ + V G+A+ LL + L + PP GKTT++R
Sbjct: 115 RVEHIRD----ISGFNVRIAKEVQGAADDIIPHLLDRKRKRVLHTLILSPPQQGKTTLLR 170
Query: 211 EIARVLAN-DYKK--------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQH 259
++AR +++ + K +V IVD SEI G G PG R V + +
Sbjct: 171 DLARQISHGKWGKSAVHWPGMKVGIVDERSEIAGCLRGV---PGFDVGPRTDVLDGCPKA 227
Query: 260 KVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+ ++ + + P V+++DEIG +A A GI ++ATAHG +++++ P+L L
Sbjct: 228 EGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAHGSSVQDMRGRPALSGL 287
Query: 320 I 320
+
Sbjct: 288 L 288
>gi|332799361|ref|YP_004460860.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|438002504|ref|YP_007272247.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697096|gb|AEE91553.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|432179298|emb|CCP26271.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
Length = 340
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK- 222
I G R+ R V G+A+ +L ++ G +L L I PP GKTT++R+I R L++ +
Sbjct: 135 ISGFNIRIAREVIGAADKVLPFIINGGKALNTLIISPPKAGKTTLLRDIIRQLSSGVDEF 194
Query: 223 -----RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
+ +VD SEI + IP +G R V +S + K ++ + + P +I
Sbjct: 195 GIKGFNIGLVDERSEIACCYEGIPQNDVG--IRTDVLDSCPKAKGIMLLLRSMSPDIIAT 252
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG + +A G+ ++ TAHG ++++ P++ LI
Sbjct: 253 DEIGRNEDVIAIEEAINTGVTIITTAHGSDLDDIRRRPTIRKLI 296
>gi|311030965|ref|ZP_07709055.1| stage III sporulation protein AA [Bacillus sp. m3-13]
Length = 310
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL--LFIGPPGVGKTTIIREI 212
++ AIR+ + R+ + G A L+ L + G L + IGPP GKTT++R++
Sbjct: 103 KVKAIRD----VSSFNIRIAKQKIGVATPLMPYLYEKGRWLSTMVIGPPQTGKTTLLRDL 158
Query: 213 ARVLANDYKKR------VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
AR++++ +++ V IVD SEI G IP +G +R+ V +S + + ++
Sbjct: 159 ARIMSSGCEEKRVASCKVGIVDERSEIAGCVHGIPQHDLG--QRVDVLDSCPKAEGMMMM 216
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + P VIV+DEIG ++ A G+ L+ + H + + L PSL
Sbjct: 217 IRSMSPDVIVVDEIGRMEDSEAVMEAVNAGVGLLMSVHAFSFDELKSRPSL 267
>gi|336114346|ref|YP_004569113.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
gi|335367776|gb|AEH53727.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
Length = 310
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKR---- 223
R+ R G+A+ + +G L + IG P GKTT +R+IAR++++ +R
Sbjct: 113 FNIRIAREKIGTADPYLFALHNGRWLSAMIIGAPQTGKTTFLRDIARLISSGIPERGISP 172
Query: 224 --VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
V IVD SEI G IP G R+ V ++ + + ++ + + P VIV+DEIG
Sbjct: 173 AKVGIVDERSEIAGCVHGIPQLHFGP--RVDVLDACPKAEGMMMLIRSMSPDVIVVDEIG 230
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ +A A GI LV T HG ++ P L+ ++
Sbjct: 231 REEDAAAIMEAVNAGISLVMTTHGENFRDIQKRPILKKIL 270
>gi|226311909|ref|YP_002771803.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
gi|226094857|dbj|BAH43299.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
Length = 320
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 173 RVGRAVSGSANLLQD-LVQDGA--SLLFIGPPGVGKTTIIREIARVLANDYK----KRVM 225
R+ R G+A ++ L +DG + L I PP GKTT++R+IAR ++ + ++V
Sbjct: 127 RIAREKKGAAKMVMSYLFEDGKLQNTLLISPPQCGKTTLLRDIARTISYGSECSSSRKVG 186
Query: 226 IVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
IVD SE+ G +P +G R V ++ + ++ + + P V+++DE+G +
Sbjct: 187 IVDERSELAGCLQGVPQRDVGP--RTDVLDACPKAVGMMMLIRSMSPDVLIVDEVGRAED 244
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A G+ ++ +AHG +++ + P L LI
Sbjct: 245 GDAVWEAIHAGVAVICSAHGASVKEVAERPMLGKLI 280
>gi|397906464|ref|ZP_10507264.1| Stage III sporulation protein AA [Caloramator australicus RC3]
gi|397160421|emb|CCJ34601.1| Stage III sporulation protein AA [Caloramator australicus RC3]
Length = 311
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 147 RAGI-SRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGAS-LLFIGPPGV 203
R GI RT+ I+ K I L R+ R + G ++ +++ L DG L I PPG
Sbjct: 104 RVGIVGRTVLGSEGIKTLKN-ISALNVRIAREIKGCSDAIVKKLYSDGIKHTLIISPPGC 162
Query: 204 GKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSE 256
GKTT++R+I R L++ K+ R+ +VD EI + +P +G R V +S
Sbjct: 163 GKTTLLRDIIRNLSDGNKRLNVRGYRIGVVDERGEIAACHQGVPQLDVG--LRTDVLDSC 220
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + + + P++I +DEIG + A + G++++ATAH T + + +
Sbjct: 221 PKTLGIYMLLRSMGPEIIAVDEIGGLDDTKAIQDALKAGVKIIATAHAGTFDEIKVRAGF 280
Query: 317 EMLI 320
+ +I
Sbjct: 281 KEMI 284
>gi|255100207|ref|ZP_05329184.1| stage III sporulation protein AA [Clostridium difficile QCD-63q42]
Length = 322
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAN---D 219
I L RV R + G ++ + + G + L I PP GKTT+IR+I R L+N D
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 220 YK---KRVMIVDTSSEIGGNG-DIPHPGIG-NARRMQVPNSEMQHKVLIEAVENHMPQVI 274
Y +V +VD +EI G+ +P +G ++ ++ +L+ ++ P VI
Sbjct: 185 YGFKGLKVALVDERNEIAGSYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMS---PNVI 241
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
V DEIG++ E A T GI L+ T HG +IE++ L L+
Sbjct: 242 VTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLL 287
>gi|307106237|gb|EFN54483.1| hypothetical protein CHLNCDRAFT_135151 [Chlorella variabilis]
Length = 316
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 554 DALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQRVGKEPDARLRILP 613
DALEEAR+A EQ+VIP+ + VELLPR I+ +Q+ L+ L Y+ VG RLR+LP
Sbjct: 90 DALEEARLAAEQIVIPRCQPVELLPRDLRIIDLQVQLMEGLGLPYEVVGSAASLRLRVLP 149
>gi|347753237|ref|YP_004860802.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
gi|347585755|gb|AEP02022.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
Length = 308
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKKR---- 223
R+ R G+A+ + +G S + IG P GKTT +R+IAR+++ +R
Sbjct: 111 FNIRIAREKIGTADPYLSALHNGHWLSAMIIGAPQTGKTTFLRDIARLISTGIPERGISP 170
Query: 224 --VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
V IVD SEI G IP G R+ V ++ + + ++ + + P VI++DEIG
Sbjct: 171 AKVGIVDERSEIAGCVHGIPQLHFGP--RVDVLDACPKAEGMMMLIRSMSPDVIIVDEIG 228
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ +A A GI LV T HG ++ P L+ ++
Sbjct: 229 REEDAAAIMEAVNAGISLVMTTHGENFRDINKRPILKKIL 268
>gi|56420943|ref|YP_148261.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|375009488|ref|YP_004983121.1| stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448238686|ref|YP_007402744.1| stage III sporulation protein [Geobacillus sp. GHH01]
gi|56380785|dbj|BAD76693.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|359288337|gb|AEV20021.1| Stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207528|gb|AGE22993.1| stage III sporulation protein [Geobacillus sp. GHH01]
Length = 306
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 13/168 (7%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS--LLFIGPPGVGKTTIIREIA 213
++ AIR+ + R+ + G A L V DG + IG P GKTT++R+ A
Sbjct: 102 KVKAIRD----VSSFNIRIAKEQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAA 157
Query: 214 RVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
R++++ ++ +V IVD SEI G IP G R+ V ++ + + ++ + +
Sbjct: 158 RLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRS 215
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
P V+++DEIG + ++ A A G+ + T HG I+++ P+L
Sbjct: 216 MSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPTL 263
>gi|153816458|ref|ZP_01969126.1| hypothetical protein RUMTOR_02711 [Ruminococcus torques ATCC 27756]
gi|317500219|ref|ZP_07958450.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087553|ref|ZP_08336484.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846200|gb|EDK23118.1| stage III sporulation protein AA [Ruminococcus torques ATCC 27756]
gi|316898390|gb|EFV20430.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400693|gb|EGG80297.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
Length = 313
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLA--NDYKK-- 222
L R+ V G A+ L + + L I PP GKTT++R++ R ++ N+Y K
Sbjct: 123 LNIRIAHEVIGCADELIPYITKNKKVCHTLIISPPRCGKTTLLRDLIRQISDGNEYVKGC 182
Query: 223 RVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
V +VD SEIGG + GI R V + + + +I + + PQV+ +DEI
Sbjct: 183 SVGVVDERSEIGG----CYMGIVQNNLGMRTDVLDCCPKAEGMIMLIRSMSPQVVAVDEI 238
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
GT + A Q G +L+A+ HG+ +E P L +I
Sbjct: 239 GTAEDIHAIEYAMQCGCKLIASVHGMDMEEAARKPVLGEMI 279
>gi|336437972|ref|ZP_08617616.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336019390|gb|EGN49115.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 162
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGG-NGDIPHPGIGNARRM 250
+ I PP GKTT++R++ R ++ N+Y K V +VD SEIGG I +G R
Sbjct: 1 MIISPPRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLG--MRT 58
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V + + + +I + + PQV+ +DEIGT + A Q G +L+A+ HG+ +E
Sbjct: 59 DVLDCCPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEA 118
Query: 311 IMNPSLEMLI 320
P L +I
Sbjct: 119 ARKPVLGEMI 128
>gi|374603523|ref|ZP_09676501.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
gi|374390825|gb|EHQ62169.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
Length = 341
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 27/210 (12%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIR 210
R+S +R I G R+ R V G A + ++ D L + PP GKTT++R
Sbjct: 116 RVSHLRE----ITGFNLRIAREVHGIAASVMPMLLDFKHAHVHHTLIVSPPQQGKTTLLR 171
Query: 211 EIARVLAND--------YKK-RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHK 260
++ R + + +K +V +VD SEI G +P +G R V + + +
Sbjct: 172 DLVRAIGSGLWHHPEARWKALKVGVVDERSEIAGCIKGVPSYDLGY--RTDVMDGCPKAE 229
Query: 261 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++ + + P V+ +DE+G + + +A G++L+ATAH +++L+ P L+ L+
Sbjct: 230 GMMMFIRSMSPDVLAVDEMGREEDLLAMREAMHAGVRLIATAHAEDMDDLLRRPGLQQLL 289
Query: 321 --GGVQN-VTLGDEEAHRRGVQKTVLERKG 347
G + VTL +R Q+ V + KG
Sbjct: 290 EEGAFRRIVTL---RRAKREWQRRVYDEKG 316
>gi|168333637|ref|ZP_02691897.1| stage III sporulation protein AA [Epulopiscium sp. 'N.t. morphotype
B']
Length = 313
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG- 192
H VG +DN+ +T+ ISAI R+ R V G+ N + +
Sbjct: 99 HRIGVVGRAVIDNKN--LKTITNISAI----------NIRIAREVVGAGNKIVPYIYKNR 146
Query: 193 --ASLLFIGPPGVGKTTIIREIARVLAN----DYKKRVMIVDTSSEIGGN-GDIPHPGIG 245
+ L + PP GKTTI+R++ R L+N D V IVD SEI IP +G
Sbjct: 147 KICNTLIVSPPKCGKTTILRDVIRNLSNGESLDVSYHVGIVDERSEIAACYMGIPQNDVG 206
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
R V +S + + ++ + + P++I +DEIG + A G+ ++ T HG
Sbjct: 207 --IRTDVLDSAPKAEGILMLLRSMSPEIIAVDEIGRDEDYKAIFDALIVGVTVICTIHGS 264
Query: 306 TIENLIMNPSLE 317
++ + + P L+
Sbjct: 265 SLNDCLNKPLLK 276
>gi|421860480|ref|ZP_16292604.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
gi|410829962|dbj|GAC43041.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
Length = 320
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIR 210
R+S +R I G R+ R V G A + ++ D L + PP GKTT++R
Sbjct: 104 RVSHLRE----ITGFNLRIAREVHGIAASVMPMLLDFKHAHIHHTLIVSPPQQGKTTLLR 159
Query: 211 EIARVLAND--------YKK-RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHK 260
++ R + + +K +V +VD SEI G +P +G R V + + +
Sbjct: 160 DLVRAIGSGLWHHPEARWKALKVGVVDERSEIAGCIKGVPSYDLGY--RTDVLDGCPKAE 217
Query: 261 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++ + + P V+ +DE G + + +A S G++L+ATAH +++L+ P L L+
Sbjct: 218 GMMMFIRSMSPDVLAVDETGREEDLLAMSEAMHAGVRLIATAHAEDMDDLLRRPGLRQLL 277
>gi|374324640|ref|YP_005077769.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
gi|357203649|gb|AET61546.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
Length = 331
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLA---- 217
I R+ RA+ G A+ + V D S L + PP GKTT++R++AR L+
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRKSGKILHTLILSPPQHGKTTLLRDLARQLSYGGL 179
Query: 218 --NDYKK---RVMIVDTSSEIGGNGDIPH---PGIGNARRMQVPNSEMQHKVLIEAVENH 269
N ++ +V I+D SEI G+ H PG R V + + + ++ + +
Sbjct: 180 ESNGGRRSGLKVGIIDERSEIAGS----HKGIPGFDVGPRTDVLDGCPKAEGMMMMIRSM 235
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
P V+++DEIG +A A GI ++A+AHG + + P+ L G
Sbjct: 236 SPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRPAFAGLTTG 288
>gi|302874798|ref|YP_003843431.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|307690585|ref|ZP_07633031.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|302577655|gb|ADL51667.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
Length = 307
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA------ 217
I L R+ R + G +N +++ +++D + + I PP GKTT++R+I R L+
Sbjct: 108 IASLNIRMAREIYGCSNSVIEYILRDQGIYNTIIISPPKCGKTTMLRDITRQLSDGIADN 167
Query: 218 NDYKKRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
N +RV ++D SEI +P +G R V + + ++ A+ P +IV
Sbjct: 168 NVSGRRVCVIDERSEIAACKLGVPEMDVG--LRTDVLDGCPKAIGIMMAIRTLAPDIIVC 225
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
DEIGT+ + + + G+ +++T HG +IE+L
Sbjct: 226 DEIGTEKDLNSIISACTCGVNIISTIHGQSIEDL 259
>gi|346722887|ref|YP_001180908.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|345106858|gb|ABP67717.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 248
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 166 AIIGLTCRVGRAVSG-SANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYK 221
+I GL RV +++ G +++ ++ S+ L + PPG GKTT++R+I R+L+N
Sbjct: 58 SITGLNIRVAKSIEGIGIKVIKHILNPSKSIYNTLIVSPPGCGKTTLLRDIVRILSNGEI 117
Query: 222 K------RVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
RV+++D SEI +G R + + + V + A+ + PQ+I
Sbjct: 118 NLSFGGFRVVVIDERSEISTYSQ-EQSKLG-TRTFVLDGVDKLNGVFM-AIRSLNPQIIA 174
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+DE+G + +A + ++ G++++AT HG ENL
Sbjct: 175 MDELGGPQDYLAVAEASKMGVKVIATMHG---ENL 206
>gi|399053816|ref|ZP_10742615.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
gi|398048593|gb|EJL41065.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
Length = 320
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 79 LLALLPEEMRIRVSEHPE-LYELIEVVMDLGRKPL-ARF--------PSGDFSLSDCQIT 128
++A+LPE +R ++ P + E +E + +PL RF P+G + + +
Sbjct: 4 IMAILPEAIRSILTALPSAVKEHLEEIRLRQNQPLEVRFGQQSSYVTPTGQLTSTASKGW 63
Query: 129 VHHIEHATSQVGDFAVDNRAGISRTLHR--ISAIRNRKGAIIG----------------- 169
+ EHA + + + + L R I+ + + I G
Sbjct: 64 IFSAEHAVKLLNQVSQHSLYALEEELKRGYITVVGGHRIGIAGKVVLDKGDVKGIRDITS 123
Query: 170 LTCRVGRAVSGSANLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYK----K 222
R+ R G+A + + +G S L I PP GKTT++R++AR L+ + +
Sbjct: 124 FNIRIAREKKGAAQKVMPYLFEGGKVLSTLVISPPQCGKTTLLRDMARSLSYGSEWSSSR 183
Query: 223 RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
+V IVD SE+ G +P +G R V ++ + ++ + + P V+++DE+G
Sbjct: 184 KVGIVDERSELAGCLQGVPQRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDEVGR 241
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ A G+ ++ +AHG I+ + P L L+
Sbjct: 242 AEDGDAVWEAIHAGVAVICSAHGADIQEVARRPMLGNLV 280
>gi|258515805|ref|YP_003192027.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
gi|257779510|gb|ACV63404.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
Length = 345
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 173 RVGRAVSGSANLLQDLV--QDGASL---LFIGPPGVGKTTIIREIARVLANDYKK----- 222
RV R + G+A+ L V +D ++ L + PP GKTT++R++ R ++N
Sbjct: 151 RVSREIPGAASKLIPYVIDRDKGTVKHTLLVSPPRCGKTTLLRDLVRQISNGIPSLSFPG 210
Query: 223 -RVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
V +VD SE+ G +P +G R V ++ + + +I + PQVI DEIG
Sbjct: 211 TTVGLVDERSELAGCYYGLPQKDVG--LRTDVLDACPKAEGMIMLLRAMSPQVIATDEIG 268
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ A + G++++ T H +I+ LI P+L+ L+
Sbjct: 269 RAEDVRALEEVFHAGVKVITTVHAASIKELIQRPALKYLL 308
>gi|225388160|ref|ZP_03757884.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
gi|225045777|gb|EEG56023.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
Length = 363
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 193 ASLLFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGN-GDIPHPGIGNA 247
+ L I PP GKTT++R++ R ++ N + V +VD SE+G +P +G
Sbjct: 172 CNTLIISPPRCGKTTLLRDVIRQVSAGNAFAPGMTVGVVDERSELGACYQGVPQNDLGP- 230
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R V + + + ++ V + PQV+ +DEIG+ + A I G L AT HG ++
Sbjct: 231 -RTDVLDCCPKDQGMMMLVRSMAPQVVAVDEIGSAGDVEAVGYIQSCGCALAATVHGASL 289
Query: 308 ENLIMNPSLEMLI 320
E++ P+L L+
Sbjct: 290 EDIYSKPALGQLV 302
>gi|354582540|ref|ZP_09001441.1| stage III sporulation protein AA [Paenibacillus lactis 154]
gi|353198832|gb|EHB64298.1| stage III sporulation protein AA [Paenibacillus lactis 154]
Length = 332
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 167 IIGLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYK 221
I G R+ + + G+A+ LL + L + PP GKTT++R++AR ++
Sbjct: 122 ISGFNVRIAKEIRGAADEMLPHLLDRKRKRVMHTLILSPPQHGKTTLLRDLARQISYGQW 181
Query: 222 K---------RVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQ 272
+V IVD SEI G PG R V + + + ++ + + P
Sbjct: 182 GAGTVRWPGMKVGIVDERSEIAGC-QRGVPGFDVGPRTDVLDGCPKAEGMMMMIRSMSPD 240
Query: 273 VIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
V+++DEIG +A A GI ++ATAHG +++++ P+L LI
Sbjct: 241 VLIVDEIGRAEDAEAVVEALHAGISVIATAHGSSVQDMRGRPALSGLI 288
>gi|398817112|ref|ZP_10575743.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
gi|398030914|gb|EJL24313.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
Length = 320
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 167 IIGLTCRVGRAVSGSA-NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYK-- 221
+ R+ R G+A ++ L +DG L L I PP GKTT++R++AR ++ +
Sbjct: 121 VTSFNIRIAREKKGAARKVMPYLFEDGKLLNTLLISPPQCGKTTLLRDMARTISYGSEWS 180
Query: 222 --KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
++V IVD SE+ G +P +G R V ++ + ++ + + P V+++DE
Sbjct: 181 SSRKVGIVDERSELAGCLQGVPQRDVGP--RTDVLDACPKAAGMMMMIRSMSPDVLIVDE 238
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+G + A G+ ++ +AHG +++ + P L LI
Sbjct: 239 VGRTEDGDAVWEAIHAGVAVICSAHGASVKEVAERPMLGKLI 280
>gi|126698788|ref|YP_001087685.1| stage III sporulation protein AA [Clostridium difficile 630]
gi|255306096|ref|ZP_05350268.1| stage III sporulation protein AA [Clostridium difficile ATCC 43255]
gi|423090770|ref|ZP_17079056.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
gi|115250225|emb|CAJ68046.1| Stage III sporulation protein AA [Clostridium difficile 630]
gi|357555885|gb|EHJ37507.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
Length = 322
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAN---D 219
I L RV R + G ++ + + G + L I PP GKTT+IR+I R L+N D
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 220 YK---KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
Y +V +VD +EI G +P +G R + + + + + + P VIV
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGVPQMDVG--IRTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG++ E A T GI L+ T HG +IE++ L L+
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDIQNRKELNRLL 287
>gi|404371401|ref|ZP_10976707.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
gi|226912470|gb|EEH97671.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
Length = 300
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 26/188 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA 193
H G+ + N G RT+ IS+ L R+ + V G +N + +
Sbjct: 82 HRIGIAGECVLVN--GEVRTIRNISS----------LNIRICKEVIGCSNEIMKYITKED 129
Query: 194 SL---LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIGG--NGDIPHP 242
+ L + PP GKTTI+R+IA+ ++ N K+V I+D SEI NG +P
Sbjct: 130 RVFNTLIVSPPKCGKTTILRDIAKNISTGMPIVNLKGKKVSIIDERSEIAACFNG-VPQL 188
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R + ++ ++ +I A+ + P +++ DEIGT + A G+ ++ T
Sbjct: 189 DVG--IRSDILDNCLKKDGMIMAIRSLSPDILICDEIGTDGDIEALHMAFNSGVNIIVTI 246
Query: 303 HGVTIENL 310
HG +IE++
Sbjct: 247 HGYSIEDV 254
>gi|407473829|ref|YP_006788229.1| stage III sporulation protein AA [Clostridium acidurici 9a]
gi|407050337|gb|AFS78382.1| stage III sporulation protein AA [Clostridium acidurici 9a]
Length = 326
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 170 LTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK--- 222
+ R+ R V G++N +++ ++++ S+ L I PP GKTTI+R++ R ++N
Sbjct: 133 INIRIAREVMGASNHIIKYVIKNSHSIYNTLIISPPKCGKTTILRDLIRNISNGINSYNF 192
Query: 223 ---RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+V +VD SE+ G NG P +G R + + +H ++ + P VI D
Sbjct: 193 EGLKVGVVDERSELAGTYNGQ-PQNDLG--YRTDILDGCYKHDGIMILLRAMSPDVIATD 249
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
E+G + A + G+Q+++T HG ++++ P+++ ++
Sbjct: 250 ELGHPNDIKAIYEAMKGGVQIISTVHGANLDDVKNKPNIKDIV 292
>gi|197301796|ref|ZP_03166866.1| hypothetical protein RUMLAC_00522 [Ruminococcus lactaris ATCC
29176]
gi|197299236|gb|EDY33766.1| stage III sporulation protein AA [Ruminococcus lactaris ATCC 29176]
Length = 313
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 170 LTCRVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGKTTIIREIARVLA--NDYKK-- 222
L RV V G A+ L + + L I PP GKTT+IR++ R ++ N+Y K
Sbjct: 122 LNIRVSHEVLGCADRLIPYIVANKQVCHTLIISPPCCGKTTLIRDLIRQISDGNEYVKGC 181
Query: 223 RVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
V +VD SE+GG + GI R V + + + +I + + PQVI +DEI
Sbjct: 182 SVGVVDERSELGGC----YLGIAQNHLGTRTDVLDCCPKAEGMIMLIRSMSPQVIAVDEI 237
Query: 280 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
GT + A Q G +++A+ HG+ ++ P L LI
Sbjct: 238 GTVEDIHAIEYAMQCGCRMIASVHGLNMDEASNKPVLGDLI 278
>gi|261405938|ref|YP_003242179.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
gi|261282401|gb|ACX64372.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
Length = 332
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 27/183 (14%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIR 210
R+ IR+ I G R+ + + G+A+ LL + L + PP GKTT++R
Sbjct: 115 RVEHIRD----ISGFNVRIAKEIQGAADDILPHLLDRKRKRVMHSLILSPPQQGKTTLLR 170
Query: 211 EIARVLANDYKK-----------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEM 257
++AR ++ Y K +V I+D SEI G G PG R V +
Sbjct: 171 DLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGV---PGFDVGPRTDVMDGCP 225
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
+ + ++ + + P V+++DEIG +A A GI ++ATAHG +++++ P+L
Sbjct: 226 KAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAHGSSVQDMRGRPALS 285
Query: 318 MLI 320
L+
Sbjct: 286 GLL 288
>gi|308069614|ref|YP_003871219.1| stage III sporulation protein AA [Paenibacillus polymyxa E681]
gi|305858893|gb|ADM70681.1| Stage III sporulation protein AA [Paenibacillus polymyxa E681]
Length = 331
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLA---- 217
I R+ RA+ G A+ + V D S L + PP GKTT++R++AR L+
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRMSGKIRHTLILSPPQHGKTTLLRDLARQLSYGGM 179
Query: 218 --NDYKK---RVMIVDTSSEIGGNGDIPH---PGIGNARRMQVPNSEMQHKVLIEAVENH 269
N ++ +V I+D SEI G+ H PG R V + + + ++ + +
Sbjct: 180 ESNGGRRNGLKVGIIDERSEIAGS----HKGIPGFDVGPRTDVLDGCPKAEGMMMMIRSM 235
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
P V+++DEIG +A A GI ++A+AHG + + P+ L G
Sbjct: 236 SPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRPAFAGLTTG 288
>gi|149183869|ref|ZP_01862262.1| stage III sporulation protein AA [Bacillus sp. SG-1]
gi|148848430|gb|EDL62687.1| stage III sporulation protein AA [Bacillus sp. SG-1]
Length = 309
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 156 RISAIRNRKGAIIGLTCRVGR-AVSGSANLLQDLVQD-GASLLFIGPPGVGKTTIIREIA 213
++ AIR+ + RV R A+ +A L+ L ++ + IG P GKTT++R+IA
Sbjct: 102 KVKAIRH----LASFNIRVAREAIGIAAPLIPSLYKNRWKHTMIIGAPQTGKTTMLRDIA 157
Query: 214 RVLANDYKK--------RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIE 264
R+++ + + +V IVD SEI G +P G R+ V ++ + + ++
Sbjct: 158 RIVSTGFPEESIPIPPYKVGIVDERSEIAGCVHGVPQLQFGP--RIDVLDACPKAEGMMM 215
Query: 265 AVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ + P VI++DEIG + + A GI L+ T HG ++E + P L+ +I
Sbjct: 216 LIRSMSPDVIIVDEIGRREDGQAILEAVNAGITLIMTTHGHSLEEISKRPYLKEII 271
>gi|329924766|ref|ZP_08279755.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
gi|328940431|gb|EGG36754.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
Length = 332
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 27/183 (14%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIR 210
R+ IR+ I G R+ + + G+A+ LL + L + PP GKTT++R
Sbjct: 115 RVEHIRD----ISGFNVRIAKEIQGAADDILPHLLDRKRKRVMHSLILSPPQQGKTTLLR 170
Query: 211 EIARVLANDYKK-----------RVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEM 257
++AR ++ Y K +V I+D SEI G G PG R V +
Sbjct: 171 DLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGV---PGFDVGPRTDVMDGCP 225
Query: 258 QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
+ + ++ + + P V+++DEIG +A A GI ++ATAHG +++++ P+L
Sbjct: 226 KAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAHGSSVQDMRGRPALS 285
Query: 318 MLI 320
L+
Sbjct: 286 GLL 288
>gi|297529425|ref|YP_003670700.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
gi|297252677|gb|ADI26123.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
Length = 306
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS--LLFIGPPGVGKTTIIREIA 213
++ AIR+ + R+ + G A L V DG + IG P GKTT++R+ A
Sbjct: 102 KVKAIRD----VSSFNIRIAKEQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAA 157
Query: 214 RVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
R++++ ++ +V IVD SEI G IP G R+ V ++ + + ++ +
Sbjct: 158 RLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRA 215
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
P V+++DEIG + ++ A A G+ + T HG I+++ P+L
Sbjct: 216 MSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPTL 263
>gi|225573674|ref|ZP_03782429.1| hypothetical protein RUMHYD_01870 [Blautia hydrogenotrophica DSM
10507]
gi|225038967|gb|EEG49213.1| stage III sporulation protein AA [Blautia hydrogenotrophica DSM
10507]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 146 NRAGIS-RTL---HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--QDGASLLFIG 199
+R G++ RT+ R+ +R+ I L R+ G A+ + V ++ A L I
Sbjct: 101 HRVGVAGRTVLSGKRVDGMRD----ISCLNLRLAHEKKGCADSVFSWVYGKEVAHTLIIS 156
Query: 200 PPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGNGDIPHPGIGN---ARRMQV 252
PP GKTT++R++ R ++N + V +VD SEI G + GI R V
Sbjct: 157 PPRCGKTTLLRDLIRQISNGTSSCPGRTVGVVDERSEIAGC----YQGIAQNDVGIRTDV 212
Query: 253 PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ + + ++ + + PQV+ +DE+G + A ++ G +L+AT HG ++E+L
Sbjct: 213 LDGCPKAEGMMMLIRSMAPQVVAVDELGDYEDIHAIESVVHCGCKLLATVHGNSLEDLRR 272
Query: 313 NPSLEMLI 320
P + L+
Sbjct: 273 KPLFQRLM 280
>gi|154498058|ref|ZP_02036436.1| hypothetical protein BACCAP_02039 [Bacteroides capillosus ATCC
29799]
gi|150273048|gb|EDN00205.1| putative stage III sporulation protein AA [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 314
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 170 LTCRVGRAVSG-SANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLAND---YKKR 223
L+ RV R+V G SA +L L +G S L + PPG GKTT++R+I R +++ R
Sbjct: 128 LSIRVARSVPGISAGILDGLTVNGLLQSTLILSPPGGGKTTLLRDIIRAVSDGDGVTPMR 187
Query: 224 VMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
V I D E+ D +P +G RR V + + L+ + PQV+ DEI
Sbjct: 188 VGIADERGELAAMYDGLPQLDVG--RRTDVLDGCPKGTALLMLLRGMNPQVLAADEITAP 245
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ A A G+ L+ATAH E+L P L+
Sbjct: 246 ADCAALEAAANCGVTLLATAHASGTEDLSSRPLYRRLL 283
>gi|291544826|emb|CBL17935.1| Uncharacterized protein conserved in bacteria [Ruminococcus
champanellensis 18P13]
Length = 295
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 85 EEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAV 144
+E+R+RV + P +Y+ G +PL + + C +++ + SQ G V
Sbjct: 34 QEIRLRVQQLPRIYDGRTEQPLPGCEPLRQAQLQACLKTACADSLYSFQRELSQ-GFVTV 92
Query: 145 D--NRAGISRTLHRISAIRNRKGAII----GLTCRVGRAVSGSANLLQD--LVQDGASLL 196
+ NR G IR+ + I L R+ + V G L + Q S+L
Sbjct: 93 EGGNRIGFCGN----GVIRDGEVETIRYVSSLNIRIAKQVLGCGQALYEKLFAQGRQSVL 148
Query: 197 FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNS 255
+GPP GKTT++R++ R+L + Y RV +VD E+ IP +G V +
Sbjct: 149 LLGPPASGKTTMLRDLCRLLGSRY--RVSVVDERGELAACRQGIPTHDLGAM--TDVFDG 204
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + A+ P I+ DE+G++ E A G+ ++ TAH ++ P
Sbjct: 205 YPKAQGMQIALRVMTPDYIICDELGSEAETTAVLASMNSGVSILGTAHAGSLAQAERRPQ 264
Query: 316 LEMLI 320
L L+
Sbjct: 265 LRCLL 269
>gi|325265391|ref|ZP_08132115.1| stage III sporulation protein AA [Clostridium sp. D5]
gi|324029392|gb|EGB90683.1| stage III sporulation protein AA [Clostridium sp. D5]
Length = 314
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGNGDIPHPGIGN---AR 248
L I PP GKTT+IR++ R ++ N Y K V +VD SEIGG + G+
Sbjct: 152 LVISPPCCGKTTLIRDLIRQISDGNMYVKGCTVGVVDERSEIGGC----YLGVAQNELGM 207
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R V + + + +I + + PQVI +DEIG+ + A Q G +++A+ HG++++
Sbjct: 208 RTDVLDCCPKAEGMIMLIRSMAPQVIAVDEIGSPEDVHAIEYAMQCGCKMIASVHGLSMD 267
Query: 309 NLIMNPSLEMLI 320
P L LI
Sbjct: 268 EAADKPVLGKLI 279
>gi|302872161|ref|YP_003840797.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
gi|302575020|gb|ADL42811.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
Length = 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 36/271 (13%)
Query: 73 DIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ E+ +LL LP E+ I+ + L+E+ E+ ++L PL ++ IT
Sbjct: 7 NTEVEKLLDRLPAEIVYTIKTTFEENLHEICEIKINL-NCPLIVIGKREYVFESLIITKE 65
Query: 131 HIEHATSQV--------------GDFAVD--NRAGIS-RTLHRISAIRNRKGAIIGLTCR 173
+ S++ G F VD +R G++ + + + +I GL R
Sbjct: 66 ILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRVGVAGKFTFENGSKQGFVNSISGLNIR 125
Query: 174 VGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------YKK 222
+ + V +L+ V++ + L I PPG GKTT++R I R+L++
Sbjct: 126 ISKTVRIEPERILKHAVKENLVSIYNTLIISPPGCGKTTLLRNIVRILSSGEGILAGRGF 185
Query: 223 RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
RV+++D SEI + D GI R V + + + ++ AV + PQ+I +DE+G+
Sbjct: 186 RVVVIDERSEICMVDNDRREIGI----RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGS 241
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ +A ++ G++++AT H +++++ M
Sbjct: 242 PSDYLAVCEASKMGVKIIATMHAESVKDIYM 272
>gi|225174900|ref|ZP_03728897.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
gi|225169540|gb|EEG78337.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
Length = 341
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 99 ELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAV-------------- 144
+L E+ + GR L R SG+ + +T ++ + ++++
Sbjct: 52 KLEEIRLRAGRPLLVRTGSGETQVGRDMVTAADLQSVLLLITEYSLYARDEELKRGYLAL 111
Query: 145 --DNRAG-ISRTL---HRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGAS--- 194
+RAG + RT+ + +R+ I G+ R+ R V G+ LL L
Sbjct: 112 PGGHRAGFVGRTVLEGGEVKLLRD----ISGINIRIARQVLGAGKQLLPSLYCQKTRRVR 167
Query: 195 -LLFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGN 246
L I P GKTT++R++AR+ N V IVD SEI G +P +G
Sbjct: 168 HTLIISAPQAGKTTVLRDLARLFGNGDAASGRPAFNVGIVDERSEIAGCYQGVPQLDVG- 226
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R V + + + ++ V + PQ++V DE+G +A A G ++ATAHG +
Sbjct: 227 -LRSDVLDGCPKAEGMMMLVRSMSPQIVVTDELGRPEDARAVEEAVNTGASILATAHGQS 285
Query: 307 IENLIMNPSLEMLI 320
+ L PSL L+
Sbjct: 286 MTELFRRPSLAYLL 299
>gi|312134806|ref|YP_004002144.1| aaa atpase [Caldicellulosiruptor owensensis OL]
gi|311774857|gb|ADQ04344.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
Length = 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 36/271 (13%)
Query: 73 DIELGRLLALLPEEM--RIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH 130
+ E+ +LL LP E+ I+ + L+E+ E+ ++L PL ++ IT
Sbjct: 7 NTEVEKLLDRLPAEIVYTIKTTFEENLHEICEIKINL-NCPLIVIGKREYVFESLIITKE 65
Query: 131 HIEHATSQV--------------GDFAVD--NRAGIS-RTLHRISAIRNRKGAIIGLTCR 173
+ S++ G F VD +R G++ + + + +I GL R
Sbjct: 66 ILNKCISRLTNNSLFTYEKNILQGYFTVDGGHRVGVAGKFTFENGSKQGFVNSISGLNIR 125
Query: 174 VGRAVS-GSANLLQDLVQDGA----SLLFIGPPGVGKTTIIREIARVLAND------YKK 222
+ + V +L+ V++ + L I PPG GKTT++R I R+L++
Sbjct: 126 ISKTVRIEPERILKHAVKENLDSIYNTLIISPPGCGKTTLLRNIVRILSSGEGILAGRGF 185
Query: 223 RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
RV+++D SEI + D GI R V + + + ++ AV + PQ+I +DE+G+
Sbjct: 186 RVVVIDERSEICMVDNDRREIGI----RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGS 241
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIM 312
+ +A ++ G++++AT H +++++ M
Sbjct: 242 PSDYLAVCEASKMGVKIIATMHAESVKDIYM 272
>gi|255280238|ref|ZP_05344793.1| stage III sporulation protein AA [Bryantella formatexigens DSM
14469]
gi|255269329|gb|EET62534.1| stage III sporulation protein AA [Marvinbryantia formatexigens DSM
14469]
Length = 381
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGGNG-DIPHPGIGNARRM 250
L I PP GKTT++R++ R +++ V +VD SEIGG+ +P +G R
Sbjct: 199 LIISPPRCGKTTLLRDLIRQISDGTASFPGVTVGVVDERSEIGGSYLGVPQNDLGI--RT 256
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V + + + ++ + P+VI +DEIG + A ++ G +L+AT HG +IE++
Sbjct: 257 DVLDCCPKAEGMMMLIRAMSPRVIAVDEIGDYRDIRAIESVIHCGCRLLATVHGDSIEDV 316
Query: 311 IMNPSLEMLI 320
P L+ L+
Sbjct: 317 QRRPLLQKLV 326
>gi|423082410|ref|ZP_17071002.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
gi|423087822|ref|ZP_17076208.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357544136|gb|EHJ26142.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357548736|gb|EHJ30596.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
Length = 322
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAN---DYK- 221
L RV R + G ++ + + G + L I PP GKTT+IR+I R L+N DY
Sbjct: 128 LNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNEDYGF 187
Query: 222 --KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+V +VD +EI G IP +G R + + + + + + P VIV DE
Sbjct: 188 KGLKVALVDERNEIAGAYLGIPQMDVG--IRTDIIETCPKDLGITMLLRSMSPNVIVTDE 245
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
IG++ E A T GI L+ T HG +I+++ L L+
Sbjct: 246 IGSEKEIKALYTALNGGIGLITTVHGDSIDDIQNRKELNRLL 287
>gi|291550239|emb|CBL26501.1| stage III sporulation protein AA [Ruminococcus torques L2-14]
Length = 314
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLA--NDYK 221
I L R+ V G A+ L + + + L I PP GKTT+IR++ R ++ N+Y
Sbjct: 121 ISSLNVRISHEVLGCADALIPYITENKQICHTLIISPPCCGKTTLIRDLIRQISDGNEYI 180
Query: 222 K--RVMIVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
K V +VD SE+GG + GI R + + + + +I + + P+VI +
Sbjct: 181 KGCSVGVVDERSELGGC----YLGIAQNHLGTRTDILDCCPKAEGMIMLIRSMAPRVIAV 236
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIGT + A Q G +L+A+ H + ++ P L LI
Sbjct: 237 DEIGTSEDIHAIEYAMQCGCRLIASVHSLDMDEASKKPILGDLI 280
>gi|338812834|ref|ZP_08624987.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
gi|337275133|gb|EGO63617.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
Length = 336
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 138 QVGDFAVD--NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQD 191
Q+G F V+ +R G++ ++ A++N I L R+ R + G+AN++ V
Sbjct: 100 QMGYFTVEGGHRIGVAGQAILESGQLKALKN----ISSLNIRIARPIPGAANIIMPYVIQ 155
Query: 192 G----ASLLFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGN-GDIP 240
G + L I PP GKTT++R++ R L++ + +V +VD SEI +P
Sbjct: 156 GHNKVYNTLIISPPRCGKTTVLRDLTRQLSSGVSQYGFAGVQVGLVDERSEIAACYQGVP 215
Query: 241 HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
+G R+ + + + ++ + + PQVIV DE+G++ + A + G+ ++A
Sbjct: 216 TVEVGP--RVDILDGCPKAIGMLMLIRSMSPQVIVTDELGSEEDVRAVNEALHAGVSVIA 273
Query: 301 TAHGVTIENLIMNPSLEMLI 320
+ HG +++ P LI
Sbjct: 274 SIHGQNATDILHRPCSSELI 293
>gi|261417733|ref|YP_003251415.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|319767455|ref|YP_004132956.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
gi|261374190|gb|ACX76933.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|317112321|gb|ADU94813.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
Length = 306
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS--LLFIGPPGVGKTTIIREIA 213
++ AIR+ + R+ + G A L V DG + IG P GKTT++R+ A
Sbjct: 102 KVKAIRD----VSSFNIRIAKEQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAA 157
Query: 214 RVLANDYKK----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
R++++ + +V IVD SEI G IP G R+ V ++ + + ++ + +
Sbjct: 158 RLISSGTGRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRS 215
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
P V+++DEIG + ++ A A G+ + T HG I+++ P+L
Sbjct: 216 MSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPTL 263
>gi|304316750|ref|YP_003851895.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778252|gb|ADL68811.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 333
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 19/157 (12%)
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLF----IGPPGVGKTTIIREIARVLAN-----D 219
G R+ R G+++ + + ++++ I PP GKTT++R+IAR ++N D
Sbjct: 130 GFNYRIMRQCIGASDEIMKYIIKYPNIVYNTLIISPPQCGKTTLLRDIARNISNGMADLD 189
Query: 220 YK-KRVMIVDTSSEIG----GNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+ + V I+D SEI GN P +G R V +S +H ++ + + P+VI
Sbjct: 190 FNGENVSIIDERSEIAACFKGN---PQNDVG--YRTDVLDSCPKHIGILMMIRSMSPKVI 244
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
+ DEIG + +A G+ ++ T HG IE+++
Sbjct: 245 ITDEIGKIEDILAIHEALNAGVSIITTVHGKDIEDIM 281
>gi|390453349|ref|ZP_10238877.1| stage III sporulation protein AA [Paenibacillus peoriae KCTC 3763]
Length = 331
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLA---- 217
I R+ RA+ G A+ + V D S L + PP GKTT++R++AR L+
Sbjct: 120 ISSFNVRIARAIPGVADRILPYVADQKSGKVRHTLILSPPQHGKTTLLRDLARQLSYGGV 179
Query: 218 --NDYKK---RVMIVDTSSEIGGNGDIPH---PGIGNARRMQVPNSEMQHKVLIEAVENH 269
N ++ +V I+D SEI G+ H PG R V + + + ++ + +
Sbjct: 180 GSNGGRRSGLKVGIIDERSEIAGS----HKGIPGFDVGPRTDVLDGCPKAEGMMMMIRSM 235
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
P V+++DEIG +A A GI ++A+AHG + + +L L G
Sbjct: 236 SPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRSALAGLTAG 288
>gi|433654894|ref|YP_007298602.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293083|gb|AGB18905.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 333
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 19/157 (12%)
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLF----IGPPGVGKTTIIREIARVLAN-----D 219
G R+ R G+++ + + ++++ I PP GKTT++R+IAR ++N D
Sbjct: 130 GFNYRIMRQCIGASDEIMKYIIKYPNIVYNTLIISPPQCGKTTLLRDIARNISNGMADLD 189
Query: 220 YK-KRVMIVDTSSEIG----GNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+ + V I+D SEI GN P +G R V +S +H ++ + + P+VI
Sbjct: 190 FNGENVSIIDERSEIAACFKGN---PQNDVG--YRTDVLDSCPKHIGILMMIRSMSPKVI 244
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
+ DEIG + +A G+ ++ T HG IE+++
Sbjct: 245 ITDEIGKIEDILAIHEALNAGVSIITTVHGKDIEDIM 281
>gi|326790836|ref|YP_004308657.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
gi|326541600|gb|ADZ83459.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
Length = 314
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDY----KKRVMIVDTSSEIGGN-GDIPHPGIGNARRM 250
L I PPG GKTT++R++ R L+ + V +VD SEI +P +G+ R
Sbjct: 153 LIISPPGCGKTTLLRDMIRYLSEGFCGYGPYTVGVVDERSEIAACYQGVPQNRMGS--RT 210
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V + + + + + + PQVI +DEIG + A I G+ L+ T HG IE+
Sbjct: 211 DVLDGCPKVEGMRMLLRSMAPQVIAVDEIGKADDCTALEEILNVGVSLLCTVHGKNIEDC 270
Query: 311 IMNPSLEMLI 320
+ P L+ L+
Sbjct: 271 LRRPILKELL 280
>gi|293115588|ref|ZP_05792179.2| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
gi|292808949|gb|EFF68154.1| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
Length = 303
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 113/257 (43%), Gaps = 34/257 (13%)
Query: 79 LLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQ 138
++ LP++++ + H + ++ E+ + + R +F + +T I+ +
Sbjct: 16 VINYLPKDIKNVIETHSDKDKITEIRLRINRPLEVKFRCSCCFIDKIIVTKTTIKEIMDK 75
Query: 139 VGDFAV----------------DNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAV 178
+ ++++ NR GI ++ ++N I L RV +
Sbjct: 76 ICNYSLYAYEDDIKRGFITVKGGNRVGICGKAVIENGHVTTLKN----ISSLNIRVANEI 131
Query: 179 SGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKKR---VMIVDTSSE 232
G + D S+ + + PPG GKTT++R+I R+L++ Y R + ++D +E
Sbjct: 132 KGCGEQYIKYITDNNSICNTIIVSPPGCGKTTLLRDIIRLLSDGYGNRGFNISVIDERNE 191
Query: 233 IGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTI 291
I IP +G + + N + + +I A+ + P++I +DEIG+ + +
Sbjct: 192 ISATDLGIPENDVGMRTDVMINN---KTEGIIMALRSMAPEIIAVDEIGSDKDINVLNKA 248
Query: 292 AQRGIQLVATAHGVTIE 308
G +++A+ H +E
Sbjct: 249 ITCGCKILASIHADNLE 265
>gi|254974727|ref|ZP_05271199.1| stage III sporulation protein AA [Clostridium difficile QCD-66c26]
gi|255092116|ref|ZP_05321594.1| stage III sporulation protein AA [Clostridium difficile CIP 107932]
gi|255313853|ref|ZP_05355436.1| stage III sporulation protein AA [Clostridium difficile QCD-76w55]
gi|255516534|ref|ZP_05384210.1| stage III sporulation protein AA [Clostridium difficile QCD-97b34]
gi|255649634|ref|ZP_05396536.1| stage III sporulation protein AA [Clostridium difficile QCD-37x79]
gi|260682798|ref|YP_003214083.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260686396|ref|YP_003217529.1| stage III sporulation protein AA [Clostridium difficile R20291]
gi|306519751|ref|ZP_07406098.1| stage III sporulation protein AA [Clostridium difficile QCD-32g58]
gi|384360380|ref|YP_006198232.1| stage III sporulation protein AA [Clostridium difficile BI1]
gi|260208961|emb|CBA61998.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260212412|emb|CBE03268.1| stage III sporulation protein AA [Clostridium difficile R20291]
Length = 322
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAN---D 219
I L RV R + G ++ + + G + L I PP GKTT+IR+I R L+N D
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 220 YK---KRVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
Y +V +VD +EI G +P +G R + + + + + + P VIV
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGVPQMDVG--IRTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG++ E A T GI L+ T HG +I+++ L L+
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDIQNRKELNRLL 287
>gi|260588113|ref|ZP_05854026.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|331082319|ref|ZP_08331445.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541640|gb|EEX22209.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|330400805|gb|EGG80406.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
Length = 323
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGGNGD-IPHPGIGNARRM 250
L I PP GKTT++R++ R ++N + V +VD SEI G+ IP +G R
Sbjct: 154 LIISPPRCGKTTLLRDLIRQVSNGNRYMPGVSVGVVDERSEIAGSYQGIPQNDLGI--RT 211
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V + + + ++ + + P+V+ +DE+G + A ++ G +L AT HG +IE++
Sbjct: 212 DVLDCCPKAEGMMMLIRSMSPEVVAVDELGDYEDIHAIESVIHCGCKLFATVHGSSIEDI 271
Query: 311 IMNPSLEMLI 320
P L+ L+
Sbjct: 272 KRKPLLQRLM 281
>gi|255655197|ref|ZP_05400606.1| stage III sporulation protein AA [Clostridium difficile QCD-23m63]
gi|296451182|ref|ZP_06892923.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296880466|ref|ZP_06904428.1| stage III sporulation protein AA [Clostridium difficile NAP07]
gi|296260003|gb|EFH06857.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296428420|gb|EFH14305.1| stage III sporulation protein AA [Clostridium difficile NAP07]
Length = 322
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLAN---DYK- 221
L RV R + G ++ + + G + L I PP GKTT+IR+I R L+N DY
Sbjct: 128 LNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNEDYGF 187
Query: 222 --KRVMIVDTSSEIGGNG-DIPHPGIG-NARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+V +VD +EI G +P +G ++ ++ +L+ ++ P VIV D
Sbjct: 188 KGLKVALVDERNEIAGAYLGVPQMDVGIRTDIIETCPKDLGITMLLRSMS---PNVIVTD 244
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG++ E A T GI L+ T HG +I+++ L L+
Sbjct: 245 EIGSEKEIKALYTALNGGIGLITTVHGDSIDDIQNRKELNRLL 287
>gi|210615799|ref|ZP_03290780.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
gi|210150135|gb|EEA81144.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
Length = 317
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 160 IRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVL 216
I+N K I + RV V AN + + + L I PP GKTT++R++ R +
Sbjct: 117 IKNMK-YISSINIRVSHEVLDCANKIFPYITYNKQMYHTLIISPPRCGKTTLLRDVIRQI 175
Query: 217 A--NDYKK--RVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
+ N + K V +VD SE+GG + +G R + + + +I + + P
Sbjct: 176 SDGNRWIKGCTVGVVDERSELGGCYLGVIQNNLG--MRTDILDRCPKADGMIMLIRSMAP 233
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
QV+ +DEIG K + A G +++ATAHG ++E + P E LI
Sbjct: 234 QVVAVDEIGAKEDVHAIEYAMHCGCKMLATAHGDSMEEICKKPIFEKLI 282
>gi|169831169|ref|YP_001717151.1| ATPase AAA [Candidatus Desulforudis audaxviator MP104C]
gi|169638013|gb|ACA59519.1| AAA ATPase [Candidatus Desulforudis audaxviator MP104C]
Length = 332
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 15/187 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGA----SLLFIGP 200
+R G++ R + A+R K + G+ R+ R V G+A+ + + G+ + L I P
Sbjct: 110 HRVGLAGRVVTDGGAVRTMK-HLSGVNFRISREVPGAADRVLPWLVHGSRATYNTLIISP 168
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
PG GKTT++R++ R + + V +VD SEI G +P +G R V
Sbjct: 169 PGCGKTTLLRDLVRQFSAGVPRLGFAGLTVGVVDERSEIAGCYRGVPQLDVGP--RTDVL 226
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ + + ++ + P VI DEIG + + A + G++++ATAH +++ L
Sbjct: 227 DGCPKAEGMMMLLRAFSPDVIATDEIGRREDVTALEEMLNAGVKILATAHAASLDELRGR 286
Query: 314 PSLEMLI 320
P L ++
Sbjct: 287 PVLRYIL 293
>gi|304407059|ref|ZP_07388713.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
gi|304344046|gb|EFM09886.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
Length = 357
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 167 IIGLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIREIARVL----- 216
I G R+ R V+G+A+ LL + AS L +G P GKTT IR++AR +
Sbjct: 122 IGGFNVRIARDVAGAADSTLPLLLDRTRRSIASTLVVGAPRQGKTTFIRDLARSISYGRW 181
Query: 217 -----ANDYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHM 270
A ++V IVD SEI + +P +G R V ++ + + ++ + +
Sbjct: 182 RSTAAAGWPGRKVGIVDERSEIAASVRGVPTFDVGP--RTDVMDACPKAEGMMMMIRSMS 239
Query: 271 PQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
P+V+++DEIG + + A + G+ ++ATAH + P++ L+
Sbjct: 240 PEVLIVDEIGREEDVEAIREAVRAGVSVIATAHAGDWQEAAARPAIRRLL 289
>gi|433542466|ref|ZP_20498893.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
gi|432186277|gb|ELK43751.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
Length = 258
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYK-- 221
I R+ R G+A + + +G S L I PP GKTT++R++AR L+ +
Sbjct: 59 ITSFNIRIAREKKGAAQKVMPYLFEGGKVLSTLVISPPQCGKTTLLRDMARSLSYGSEWS 118
Query: 222 --KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
++V IVD SE+ G +P +G R V ++ + ++ + + P V+++DE
Sbjct: 119 SSRKVGIVDERSELAGCLQGVPQRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDE 176
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+G + A G+ ++ +AHG I+ + P L L+
Sbjct: 177 VGRAEDGDAVWEAIHAGVAVICSAHGADIQEVARRPMLGNLV 218
>gi|375309142|ref|ZP_09774423.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
gi|375078451|gb|EHS56678.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
Length = 331
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLA---- 217
I R+ RA+ G A+ + V D S L + PP GKTT++R++AR L+
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADQKSGKIRHTLILSPPQHGKTTLLRDLARQLSYGGV 179
Query: 218 --NDYKK---RVMIVDTSSEIGGNGDIPH---PGIGNARRMQVPNSEMQHKVLIEAVENH 269
N ++ +V I+D SEI G+ H PG R V + + + ++ + +
Sbjct: 180 GSNGGRRSGLKVGIIDERSEIAGS----HKGIPGFDVGPRTDVLDGCPKAEGMMMMIRSM 235
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
P V+++DEIG +A A GI ++A+AHG + + +L L G
Sbjct: 236 SPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRSALAGLTAG 288
>gi|410460620|ref|ZP_11314295.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
gi|409926878|gb|EKN64030.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
Length = 312
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLA------N 218
I R+ + G A+ L + G L + GPP GKTT++R++AR+++ N
Sbjct: 111 ITSYNIRIAKEKVGIADPLTPYLYRGRWLNTIIYGPPQTGKTTLLRDMARMMSTGSYDSN 170
Query: 219 DYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+V IVD SEI G IP G R+ V ++ + + ++ + + P ++V+D
Sbjct: 171 IPSFKVGIVDERSEIAGCVKGIPQHQFGP--RIDVLDACPKAEGMMMLIRSMSPDILVVD 228
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
EIG + A G+ L + HG ++E+L PS++ L+
Sbjct: 229 EIGRMEDTEAILEAVNAGVALFISVHGSSMEDLYKRPSIKPLM 271
>gi|317128413|ref|YP_004094695.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
gi|315473361|gb|ADU29964.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
Length = 310
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQ---DGASLLFIGPPGVGKTTIIREIARVLANDYKKR 223
I R+ R G A +Q + L IGPP GKTT++R++AR ++ K R
Sbjct: 114 ISSFNIRIARQKQGVAYAYLPYIQRRGNWCHTLIIGPPKSGKTTLLRDLAREISIGSKSR 173
Query: 224 ------VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
V I+D SEI G+ +P G ++ + ++ + + L+ + + P+V+++
Sbjct: 174 KIEPKNVGIIDERSEIAGSVKGVPQHDFGV--KIDILDACPKAEGLMMMIRSMSPEVLIV 231
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG K + A G+ + A+ HG + ++ P++ LI
Sbjct: 232 DEIGRKEDCEAIMEAVHAGVTIFASVHGENLNDVKSRPTIARLI 275
>gi|333924296|ref|YP_004497876.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749857|gb|AEF94964.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 323
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGP 200
+R GI+ + L ++N K I G R+ RA+ G A+ +L L+ + + P
Sbjct: 103 HRVGITGKVLTEQGRVKNIK-YIAGFNFRISRALVGVADKVLPYLISPEGRFYHTMLVSP 161
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
P GKTT++R++ R L+ + V +VD SEI G +P IG R V
Sbjct: 162 PRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 219
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
++ + ++ + + PQVI DEIG + A + G++++ T HG ++E L
Sbjct: 220 DACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLEELTDR 279
Query: 314 PSLEML 319
P+L+ L
Sbjct: 280 PALQYL 285
>gi|303287636|ref|XP_003063107.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455743|gb|EEH53046.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 140
Score = 59.7 bits (143), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 550 SEKIDALEEARVAIEQVVIPKGESVELLPRPSYILSIQIDLIR-KYQLHYQRVGKEPDAR 608
+E+ DALEE R+A+EQ+VIP E VELLPR + +Q ++I+ +Y+L ++ G AR
Sbjct: 71 AEEADALEEVRMAVEQLVIPHQEPVELLPRADRVRRMQAEVIQGEYRLKHEECGDGAAAR 130
Query: 609 LRILP 613
++ILP
Sbjct: 131 IKILP 135
>gi|114566101|ref|YP_753255.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337036|gb|ABI67884.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 313
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 173 RVGRAVSGSA-NLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDYKK----RVM 225
R+ R G A +L ++ G + L I PP GKTTI+R+IAR ++ +
Sbjct: 133 RLAREKKGCARTILPHIISTGTIVNTLIISPPRCGKTTILRDIARSISTGSSACPPHNIA 192
Query: 226 IVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
I+D SEI G H G+ R V ++ + ++ A+ + PQV++ DEIG K
Sbjct: 193 IIDERSEIAGT----HRGLAQLDVGIRSDVLDACPKSWGMMMAIRSLSPQVLIADEIGRK 248
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTV 342
+ A G+ ++ + H +E L P ++ L+ + A R GV +
Sbjct: 249 EDVEALQECVNAGVAVICSIHARNLEELSKRPLIKKLL---------SQGAFRLGV--VL 297
Query: 343 LERKGPSTF 351
R GP T
Sbjct: 298 SRRNGPGTV 306
>gi|224114563|ref|XP_002316796.1| predicted protein [Populus trichocarpa]
gi|222859861|gb|EEE97408.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 30/34 (88%)
Query: 260 KVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
+V IE VENHMPQV VIDEIGTKLEAMA STIAQ
Sbjct: 27 RVFIEEVENHMPQVSVIDEIGTKLEAMAVSTIAQ 60
>gi|291545427|emb|CBL18535.1| stage III sporulation protein AA [Ruminococcus sp. SR1/5]
Length = 310
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKK----RVMIVDTSSEIGG-NGDIPHPGIGNARRM 250
L + PP GKTT++R+I R ++N + V +VD SE+ G IP +G R
Sbjct: 148 LIVSPPRCGKTTLLRDIIRQMSNGWGNISGVTVGVVDERSELAGCYQGIPQNDLG--MRT 205
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ + + + + + + P V+ +DE+G + + A ++ G +L+ATAHG ++E
Sbjct: 206 DILDGCPKAEGMQMLIRSMSPVVVAVDELGKEEDFKAVESVIHCGCRLIATAHGASMEET 265
Query: 311 IMNPSLEML 319
+ P L
Sbjct: 266 LSQPFFRKL 274
>gi|365842271|ref|ZP_09383300.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
gi|364576112|gb|EHM53459.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
Length = 305
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 170 LTCRVGRAVSG-SANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDYKK---R 223
L RV R V G SA +L L G S L + PPG GKTT++R++ R +++ R
Sbjct: 124 LAIRVAREVPGLSAAVLDRLWSGGVLQSTLLLSPPGGGKTTLLRDLIRAVSDGEGGPALR 183
Query: 224 VMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
V + D E+ G+ P IG R+ V + + L+ + PQV+ DEI
Sbjct: 184 VGVADERGELAAMYQGE-PQFSIG--RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITA 240
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKT 341
+A A A G+ L+ TAH ++E L P L+ DE RR V
Sbjct: 241 PEDAAALEMAANCGVSLLCTAHAGSLEELKARPLYRRLL---------DEGLFRRLV--- 288
Query: 342 VLERKG 347
++ER G
Sbjct: 289 IIERAG 294
>gi|334341607|ref|YP_004546587.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
gi|334092961|gb|AEG61301.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
Length = 337
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN--LLQDLVQDGA--SLLFIGP 200
+R GI+ + L ++N K I G R+ RAV G A+ L + DG + + P
Sbjct: 117 HRVGITGKVLTEQGRVKNIK-YISGFNFRISRAVPGVADRVLPYLIAPDGKFYHTMLVSP 175
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
P GKTT++R++ R L+ + V +VD SEI G +P +G R V
Sbjct: 176 PRCGKTTLLRDLIRRLSEGVPELAFPGVNVGVVDERSEIAGCYRGVPQRDVGP--RTDVL 233
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
++ + ++ + + P VI DEIG + + A + G++++ T HG ++E L
Sbjct: 234 DACPKAAGMMMLLRSMGPVVIATDEIGRQEDVAALEEVLNAGVKVLTTVHGSSLEELADR 293
Query: 314 PSLEML 319
P+L+ L
Sbjct: 294 PALQYL 299
>gi|323702758|ref|ZP_08114418.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
gi|323532275|gb|EGB22154.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
Length = 323
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGP 200
+R GI+ + L ++N K I G R+ RA+ G A+ +L L+ + + P
Sbjct: 103 HRVGITGKVLTEQGRVKNIK-YISGFNFRISRALVGVADKVLPYLISPEGRFYHTMLVSP 161
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
P GKTT++R++ R L+ + V +VD SEI G +P IG R V
Sbjct: 162 PRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 219
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
++ + ++ + + PQVI DEIG + A + G++++ T HG ++E L
Sbjct: 220 DACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLEELTDR 279
Query: 314 PSLEML 319
P+L+ L
Sbjct: 280 PALQYL 285
>gi|333897006|ref|YP_004470880.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112271|gb|AEF17208.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 334
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASL----LFIGPPGVGKTTIIREIARVLAND----- 219
GL R+ R GS++ + + + L I PP GKTT+IR+IAR ++N
Sbjct: 130 GLNYRIMRQCIGSSDEIMRYIVKYPEVVNNTLIISPPQCGKTTLIRDIARNISNGMPELN 189
Query: 220 -YKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
+ ++V IVD SEI IP +G R V + +H ++ + + P+VI+ D
Sbjct: 190 FHGEKVSIVDERSEIAACFKGIPQNDVG--YRTDVLDLCPKHIGILMMIRSMSPKVIITD 247
Query: 278 EIGTKLEAMAASTIA-QRGIQLVATAHGVTIENL 310
EIG K+E +A+ A G+ ++ T HG +E++
Sbjct: 248 EIG-KVEDIASIHEALNAGVSIITTVHGNDVEDV 280
>gi|373115236|ref|ZP_09529412.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670528|gb|EHO35607.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
Length = 305
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 170 LTCRVGRAVSG-SANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDYKK---R 223
L RV R V G SA +L L G S L + PPG GKTT++R++ R +++ R
Sbjct: 124 LAIRVAREVPGLSAAVLDRLWSGGVLQSTLLLSPPGGGKTTLLRDLIRAVSDGEGGPALR 183
Query: 224 VMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
V + D E+ G+ P IG R+ V + + L+ + PQV+ DEI
Sbjct: 184 VGVADERGELAAMYQGE-PQFSIG--RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITA 240
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+A A A G+ L+ TAH ++E L P L+
Sbjct: 241 PEDAAALEMAANCGVSLLCTAHAGSLEELKARPLYRRLL 279
>gi|302389879|ref|YP_003825700.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
gi|302200507|gb|ADL08077.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
Length = 341
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQD--GASL--LFIGPPGVGKTTIIREIARVLANDYKK 222
I G R+ R V G+A+ V D G L + + PP GKTT++R++ R L++ +
Sbjct: 134 ISGFNIRIAREVLGAADEALRFVIDEKGEFLNTMILSPPKAGKTTLLRDLIRQLSSGNPR 193
Query: 223 ------RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
+V +VD SEI + +P +G R V + + + ++ + + P +I
Sbjct: 194 LGLKGFKVGVVDERSEIACCYEGVPQNDVGI--RTDVLDGCPKARGIMMLLRSMSPDIIA 251
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
DEIG + A G++L+ TAHG +E++ P+L LIG
Sbjct: 252 TDEIGRTEDVEAMEEALNAGVKLLTTAHGADLEDVGRRPTLRKLIG 297
>gi|410667979|ref|YP_006920350.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
gi|409105726|gb|AFV11851.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
Length = 330
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLANDYKK-- 222
L R+ RAV GSA L V D + L + PP GKTT++R+I R L+ +
Sbjct: 132 LNFRIARAVPGSARPLLPYVLDFRNKRPYHTLLVSPPCAGKTTLLRDIIRSLSYGIPELH 191
Query: 223 ----RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVID 277
V +VD E+ +P +G R+ V + + +I + + PQVI D
Sbjct: 192 FPALSVGVVDERCELAACYQGVPQHDLGP--RVDVLDRCPKAAGMIILLRSMAPQVIATD 249
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRG 337
EIG + A + G+ ++AT H + E L P L+ ++ ++R
Sbjct: 250 EIGRCEDINAIWEMLYTGVSILATVHASSWEELERRPYLQDVV-------------NKRV 296
Query: 338 VQKTVL--ERKGPST 350
Q+ V RKGP T
Sbjct: 297 FQRYVFLSRRKGPGT 311
>gi|339629557|ref|YP_004721200.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|379007324|ref|YP_005256775.1| hypothetical protein [Sulfobacillus acidophilus DSM 10332]
gi|339287346|gb|AEJ41457.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|361053586|gb|AEW05103.1| hypothetical protein Sulac_1606 [Sulfobacillus acidophilus DSM
10332]
Length = 292
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 166 AIIGLTCRVGRAVSG-SANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
A+ GL R RA + ++++ + S L GPP GKTT +R++ R+ +N RV
Sbjct: 114 AVTGLNFRRARAFTDIGLSVMEAVGSPYGSWLLAGPPRSGKTTFLRDLIRLWSNR-GLRV 172
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
+++D EI G V + + + A+ P VI +DEIG+ E
Sbjct: 173 VVIDERLEIAGGSQSEGFSFDVGLHTDVLEAWPKLAGISVAIRTLGPDVIAVDEIGSVDE 232
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
A S Q G+ ++AT H +L M P +
Sbjct: 233 LAAVSRARQAGVTVLATVHARDWHDLEMRPEWQ 265
>gi|420156698|ref|ZP_14663538.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
gi|394756708|gb|EJF39767.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
Length = 337
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 173 RVGRAVSGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYK---KRVMIV 227
RV R +SG+A+ + LV + +L G P GKTTI+R++AR LA +++ +V
Sbjct: 134 RVARQISGAADEVLSLVGEEIVQGVLLAGAPSTGKTTILRDLARQLAGGGTLPPRKITVV 193
Query: 228 DTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEA 285
D E+ G GD + +G + + + + +++A+ + P+VI+ DE+G++ E
Sbjct: 194 DERGELAGVYRGDAQND-LGCC--CDILDGYPKSQGILQAIRSLSPEVILCDELGSERET 250
Query: 286 MAASTIAQRGIQLVATAHGVT 306
A + G+ L+ + H +
Sbjct: 251 AAVEEVVNAGVSLIVSVHAAS 271
>gi|312110267|ref|YP_003988583.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|423719293|ref|ZP_17693475.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215368|gb|ADP73972.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|383368196|gb|EID45471.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 308
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 173 RVGRAVSGSANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDY------KKRV 224
R+ + G A L V DG + + IG P GKTT++R+ AR+++ ++V
Sbjct: 115 RIAKQKIGIAEPLVPYVYDGRWHNTMIIGSPQTGKTTLLRDAARMISTGILARHIPSQKV 174
Query: 225 MIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
IVD SEI G IP +GN R+ V ++ + + ++ + + P V+++DEIG
Sbjct: 175 GIVDERSEIAGCVKGIPQFQLGN--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSE 232
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVL 343
+ A G+ + T HG ++++ P+L ++ ++ R V+ T
Sbjct: 233 DGAAILEAVNAGVCIWTTVHGRNRKDVLQRPTLRPIM---------EQGVFERFVELT-- 281
Query: 344 ERKGPSTFSC 353
+GP T C
Sbjct: 282 NERGPGTVRC 291
>gi|336434712|ref|ZP_08614434.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008491|gb|EGN38507.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
Length = 313
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGNGDIPHPGIGN---AR 248
L I PP GKTT+IR++ R ++ N Y K V +VD SE+GG + GI
Sbjct: 152 LIISPPCCGKTTLIRDMIRQISDGNAYVKGCTVGVVDERSELGGC----YLGIAQNDIGM 207
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + + + +I + + P+V+ IDEIG + E A G +L+A+ HG +E
Sbjct: 208 RTDILDCCPKAEGMILLIRSMAPRVLAIDEIGGEEEIRALEYAMHCGCKLIASVHGSDLE 267
Query: 309 NLIMNPSLEMLI 320
+ P ++ LI
Sbjct: 268 EISERPGVKELI 279
>gi|166030404|ref|ZP_02233233.1| hypothetical protein DORFOR_00065 [Dorea formicigenerans ATCC
27755]
gi|166029762|gb|EDR48519.1| stage III sporulation protein AA [Dorea formicigenerans ATCC 27755]
Length = 316
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGNGDIPHPGIGNAR--- 248
L + PPG GKTT++R++ R ++ N++ K V +VD SEI G + G+
Sbjct: 147 LLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGC----YRGVAQNHLGI 202
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R V + + + +I + + P+VI +DEIG + A G +++ATAH ++E
Sbjct: 203 RTDVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMIATAHADSME 262
Query: 309 NLIMNPSLEMLI 320
L P + LI
Sbjct: 263 ELQKKPVFDRLI 274
>gi|160880656|ref|YP_001559624.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
gi|160429322|gb|ABX42885.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
Length = 322
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAN-------- 218
+ R+ V G ANL+ + S+ L I PPG GKTT++R++ R L++
Sbjct: 126 INIRLSHQVKGCANLVMPYILRDNSIYHTLIISPPGCGKTTLLRDVIRQLSDGEQDTKGG 185
Query: 219 DYKKR--VMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
Y++ V +VD SEI P +G R V + + K ++ + + P V+
Sbjct: 186 SYREGIPVGVVDERSEIAACYMGTPQNDLG--IRTDVLDCCPKAKGMMLLIRSMSPSVLA 243
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+DEIG + A GI+++AT HG TI+ + P L LI
Sbjct: 244 VDEIGLGEDIEAIHYAMGCGIKMIATVHGGTIDEVRDKPLLGELI 288
>gi|336234728|ref|YP_004587344.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361583|gb|AEH47263.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
Length = 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 173 RVGRAVSGSANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIARVLANDY------KKRV 224
R+ + G A L V DG + + IG P GKTT++R+ AR+++ ++V
Sbjct: 115 RIAKQKIGIAEPLVPYVYDGRWHNTMIIGSPQTGKTTLLRDAARMISTGILARHIPSQKV 174
Query: 225 MIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
IVD SEI G IP +GN R+ V ++ + + ++ + + P V+++DEIG
Sbjct: 175 GIVDERSEIAGCVKGIPQFQLGN--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSE 232
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVL 343
+ A G+ + T HG ++++ P+L ++ ++ R V+ T
Sbjct: 233 DGEAILEAVNAGVCIWTTVHGRNRKDVLQRPTLRPIM---------EQGVFERFVELT-- 281
Query: 344 ERKGPSTFSC 353
+GP T C
Sbjct: 282 NERGPGTVRC 291
>gi|402571564|ref|YP_006620907.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
gi|402252761|gb|AFQ43036.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
Length = 356
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 167 IIGLTCRVGRAVSG-SANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYKK 222
I L R+ R + G S +L L+ L L I PP GKTT++R++ R ++N K
Sbjct: 160 ISSLNLRIARDIQGQSLKILPLLLNSAGQLYHTLLISPPRAGKTTLLRDLIRSISNGVPK 219
Query: 223 ------RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
V +VD E+ G IP +G R V + + + V + PQV+
Sbjct: 220 LRLEGQTVGVVDERGELAGMWQGIPTYDLG--LRTDVLDGCPKASGMSMMVRSMSPQVLA 277
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHR 335
+DE+G + +A + + G+++++TAH T+E P + L+ D+E
Sbjct: 278 VDELGHAEDVVAINDALRTGVRILSTAHAGTLEEARSRPIITHLL---------DQEVFE 328
Query: 336 RGVQKTVLERK-GPSTF 351
R V VL R+ GP T
Sbjct: 329 RLV---VLSRRHGPGTL 342
>gi|346306473|ref|ZP_08848629.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
gi|345897847|gb|EGX67744.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
Length = 316
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGNGDIPHPGIGNAR--- 248
L + PPG GKTT++R++ R ++ N++ K V +VD SEI G + G+
Sbjct: 147 LLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGC----YRGVAQNHLGI 202
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R V + + + +I + + P+VI +DEIG + A G +++ATAH ++E
Sbjct: 203 RTDVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMLATAHADSME 262
Query: 309 NLIMNPSLEMLI 320
L P + LI
Sbjct: 263 ELQKKPVFDRLI 274
>gi|310642679|ref|YP_003947437.1| stage III sporulation protein aa [Paenibacillus polymyxa SC2]
gi|386041735|ref|YP_005960689.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
gi|309247629|gb|ADO57196.1| Stage III sporulation protein AA [Paenibacillus polymyxa SC2]
gi|343097773|emb|CCC85982.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
Length = 331
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLANDYK 221
I R+ RA+ G A+ + V D S L + PP GKTT++R++AR L+
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRKSGMIRHTLILSPPQHGKTTLLRDLARQLSYGGM 179
Query: 222 K---------RVMIVDTSSEIGGNGDIPH---PGIGNARRMQVPNSEMQHKVLIEAVENH 269
K +V I+D SEI G+ H PG R + + + + ++ + +
Sbjct: 180 KSNGGRRNGLKVGIIDERSEIAGS----HKGIPGFDVGPRTDILDGCPKAEGMMMMIRSM 235
Query: 270 MPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
P V+++DEIG +A A GI ++A+AHG
Sbjct: 236 SPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHG 270
>gi|121534513|ref|ZP_01666336.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
gi|121307006|gb|EAX47925.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
Length = 349
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 173 RVGRAVSGSANLLQDLV--QDG--ASLLFIGPPGVGKTTIIREIARVLANDYKK------ 222
R+ R V G A+ L + DG S L I PP GKTT++R+I R L++ ++
Sbjct: 150 RLAREVKGCADPLMPYLIGPDGRLYSTLLISPPRCGKTTLLRDIIRQLSSGVRQLNFSGV 209
Query: 223 RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
+V +VD SEI +P +G R+ V + + L+ + + PQV+V DE+G
Sbjct: 210 QVGLVDERSEIAACVSGVPTMDLGP--RVDVLDGCPKASGLLMLLRSMAPQVLVTDELGR 267
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+A A G+ +VAT HG I + P + LI
Sbjct: 268 GEDAAAIQEALHAGVVVVATVHGRDIAGIAQRPYVGELI 306
>gi|414154684|ref|ZP_11411001.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453515|emb|CCO08905.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 146 NRAGIS-RTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LFIGP 200
+R GI+ + L +R+ K I G R+ RA+ G A+ +L L+ + + P
Sbjct: 117 HRVGITGKVLTDQGVVRHIK-YISGFNLRISRAIKGVADRVLPYLISPTGKFYHTVLVSP 175
Query: 201 PGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVP 253
P GKTT++R++ R L+ + V +VD SEI G IP +G R V
Sbjct: 176 PRCGKTTLLRDLVRRLSEGIPELGWPGSNVGVVDERSEIAGCYRGIPQQDVGP--RTDVL 233
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
++ + ++ + + P VI DEIG + + A + G++++ T HG ++ L
Sbjct: 234 DACPKAAGMMMLLRSMGPAVIATDEIGRREDVAALEEVLHAGVKVLTTVHGGSLAELADR 293
Query: 314 PSLEML 319
P+L+ L
Sbjct: 294 PALQYL 299
>gi|154502445|ref|ZP_02039505.1| hypothetical protein RUMGNA_00258 [Ruminococcus gnavus ATCC 29149]
gi|336434239|ref|ZP_08614039.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796841|gb|EDN79261.1| stage III sporulation protein AA [Ruminococcus gnavus ATCC 29149]
gi|336014282|gb|EGN44138.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
Length = 313
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 173 RVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGKTTIIREIARVLA--NDYKK--RVM 225
R+ + G A+ L ++ ++ L I PP GKTT+IR++ R ++ N + K V
Sbjct: 126 RMSHEIPGCADRLLPMITKNREVCHTLVISPPCGGKTTLIRDLIRQISDGNAHVKGCTVG 185
Query: 226 IVDTSSEIGGNGDIPHPGIGN---ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
+VD SEIGG + G+ R + + + + +I + + P+V+ +DEIG +
Sbjct: 186 VVDERSEIGGC----YLGVAQNHLGSRTDILDCCPKAEGMIMLIRSMSPRVLAVDEIGAQ 241
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
E A Q G +L+A+ HG ++ + P L L+
Sbjct: 242 EEIRAVEYAMQCGCKLIASVHGNSMAEIASKPGLGELV 279
>gi|218132216|ref|ZP_03461020.1| hypothetical protein BACPEC_00073 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992875|gb|EEC58875.1| stage III sporulation protein AA [[Bacteroides] pectinophilus ATCC
43243]
Length = 299
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYK----KRVM 225
RV + G A + + + + L I PPG GKTT++R++ R ++N + V
Sbjct: 120 RVAHQIRGCAASVYGFIHNSTQIENTLIISPPGCGKTTMLRDLIRQISNGNSYYEGQTVG 179
Query: 226 IVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+VD SEI NG P +G R V + + + ++ V + P+VI +DEI T
Sbjct: 180 VVDERSEIAACYNGR-PQNDLG--IRTDVLDCCPKAEGMVMLVRSMSPRVIAVDEIATPD 236
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIG 321
+ A + G ++ATAH + L P L+
Sbjct: 237 DIEAVRYVMNCGCSIIATAHAYNADELRQKPQFAELLA 274
>gi|153855227|ref|ZP_01996393.1| hypothetical protein DORLON_02407 [Dorea longicatena DSM 13814]
gi|149752226|gb|EDM62157.1| stage III sporulation protein AA [Dorea longicatena DSM 13814]
Length = 317
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDY--KKRVMIVDTSSEIGG---NGDIPHPGIGNAR 248
L + PPG GKTT++R++ R ++ N + V +VD SEIGG H GI
Sbjct: 150 LIVSPPGCGKTTMLRDLIRQISEGNSWIPGLAVGVVDERSEIGGCYMGVAQNHLGI---- 205
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + + + +I + + PQVI +DEIGT + A G +++AT H ++E
Sbjct: 206 RTDILDGCPKAEGMIMLIRSMGPQVIAVDEIGTPEDVHAIEYAMHCGCKMLATVHAESME 265
Query: 309 NLIMNPSLEMLIG 321
L P +IG
Sbjct: 266 ELRKKPLFNRMIG 278
>gi|390935036|ref|YP_006392541.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570537|gb|AFK86942.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 334
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 167 IIGLTCRVGRAVSGSANLLQ-------DLVQDGASLLFIGPPGVGKTTIIREIARVLAND 219
I G R+ R GS++ + D+V + L I PP GKTT+IR+IAR ++N
Sbjct: 128 ISGFNYRIMRQCIGSSDEIMRYIVKYPDVVNN---TLIISPPQCGKTTLIRDIARNISNG 184
Query: 220 Y------KKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQ 272
++V IVD SEI IP +G R V + +H ++ + + P+
Sbjct: 185 MPELNFQGEKVSIVDERSEIAACFKGIPQNDVG--YRTDVLDLCPKHIGILMMIRSMSPK 242
Query: 273 VIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
VI+ DEIG + + G+ ++ T HG IE++
Sbjct: 243 VIITDEIGKVEDISSIHEALNAGVSIITTVHGNGIEDV 280
>gi|333979376|ref|YP_004517321.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822857|gb|AEG15520.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 336
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLV----QDGASLLFIGPPGVGKTTIIREIARVLANDYK 221
I L R+ R V G A LL L+ + L PP GKTT++R+I R L+N
Sbjct: 138 ISSLNIRISREVPGLATPLLPHLIDRRLKSIYHTLIFSPPRCGKTTLLRDIIRQLSNGAP 197
Query: 222 K------RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+ V +VD SE+ G +P +G R V + + + +I + + PQVI
Sbjct: 198 ELDLPGLTVGVVDERSELAGCYRGVPQRDVGV--RTDVLDGCPKAEGMIMLLRSMAPQVI 255
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
DEIG + A + G++++ T HG ++ L P+L+ L
Sbjct: 256 ATDEIGRDEDIAALEEVFHAGVRVLVTVHGASLAELAARPALQHL 300
>gi|355672461|ref|ZP_09058391.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
gi|354815162|gb|EHE99758.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
Length = 328
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 173 RVGRAVSGSANLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK-------R 223
RV + G A+ + D + L L I PP GKTT++R+I R ++N +
Sbjct: 134 RVAHEILGCADPVMDYLYMDRFLNTLIISPPRCGKTTLLRDIIRQVSNGRSRDRWIPGMS 193
Query: 224 VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTK 282
V +VD SE+ IP +G R V + + + ++ V P VI +DEIG++
Sbjct: 194 VGVVDERSELAACYQGIPQNDLGV--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSR 251
Query: 283 LEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+ A + G L AT HG ++E++ P + L+
Sbjct: 252 QDMEAIEYVRNCGCSLAATIHGNSLEDIRQKPCMGELL 289
>gi|357012942|ref|ZP_09077941.1| stage III sporulation protein AA [Paenibacillus elgii B69]
Length = 328
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDGAS----LLFIGPPGVGKTTIIREIARVLA---- 217
+ G R+ R +A +L L++ G L + PP GKTT++R++AR+L
Sbjct: 122 VSGFNVRLAREWKNAAKPVLPYLLEPGGERVYRTLIVSPPQQGKTTLVRDLARLLGTGGA 181
Query: 218 -NDYKK--RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQV 273
N ++ ++ IVD SEI +P +G R V + + + ++ + + P+V
Sbjct: 182 DNGLRRSFKIGIVDERSEIAACVKGVPRFDVGY--RTDVLDGCPKAEGMMMMIRSMSPEV 239
Query: 274 IVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
++ DEIG +A+A G+ ++ATAHG L P L L+
Sbjct: 240 LIADEIGRAEDALAIHEALHAGVGVIATAHGRDAAELKRRPILRELL 286
>gi|283797254|ref|ZP_06346407.1| stage III sporulation protein AA [Clostridium sp. M62/1]
gi|291075104|gb|EFE12468.1| stage III sporulation protein AA [Clostridium sp. M62/1]
Length = 427
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 162 NRKGAIIGLTC---RVGRAVSGSAN-LLQDLV-QDGASL---LFIGPPGVGKTTIIREIA 213
+R AI +TC RV R + G ++ +L L+ +D L L + PP GKTT++R++
Sbjct: 169 SRVKAIKPVTCLNVRVARQIRGCSDSVLPYLIDRDRGELYPVLILSPPCCGKTTLLRDLV 228
Query: 214 RVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVEN 268
R +++ K V IVD SEI I +G R V + + + ++ + +
Sbjct: 229 RKISDGCGYMEGKTVGIVDERSEIAACFQGIAQNDVGM--RSDVLDGCPKAQGMMMLIRS 286
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
PQV+ +DEIG + + A A G L+ATAHG + +++ P+ L
Sbjct: 287 MAPQVLAVDEIGGREDLEALRYAAGCGCSLIATAHGTSYQDVEAKPAFRELF 338
>gi|83590379|ref|YP_430388.1| hypothetical protein Moth_1536 [Moorella thermoacetica ATCC 39073]
gi|83573293|gb|ABC19845.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 350
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 169 GLTCRVGRAVSGSA-NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKK--- 222
GL R+ R + G A +L+ L++ G L L + PP GKTT++R++ R+L+ +
Sbjct: 149 GLNLRLARDIPGCARSLIPYLLEGGRPLHTLILSPPRCGKTTLLRDLIRLLSTGVPELKF 208
Query: 223 ---RVMIVDTSSEIGGNG-DIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
V +VD SEI G +P +G R V + + ++ + + P+VI DE
Sbjct: 209 SGVNVGVVDERSEIAGCWLGVPQLEVGP--RTDVLDRCPKAAGMLMLLRSMGPEVIATDE 266
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
IG E A + G+ ++A+ H ++E L P L+
Sbjct: 267 IGRPEELAALQDVLHAGVTMLASVHAGSLEELQHRPGWGPLL 308
>gi|239827682|ref|YP_002950306.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
gi|239807975|gb|ACS25040.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
Length = 308
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 35/255 (13%)
Query: 95 PELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVH---HIEHATSQVGDFAVD------ 145
P +E IE + +PL G Q+T H+ + SQ +A++
Sbjct: 21 PSWHEQIEEIRVRVLRPLEVIVKGKAHFLPYQVTSEDGIHLLNKLSQYSIYAIEEELKRG 80
Query: 146 -------NRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG-- 192
+R G++ + + AIR+ + R+ + G A L V +G
Sbjct: 81 FITVQGGHRVGLAGKVVTDGGSVKAIRH----VTSFNIRIAKQRIGIAEPLLPYVYNGRW 136
Query: 193 ASLLFIGPPGVGKTTIIREIARVLANDYK------KRVMIVDTSSEIGGN-GDIPHPGIG 245
+ + IG P GKTT++R+ AR+++ ++V IVD SEI G IP +G
Sbjct: 137 YNTMIIGSPQTGKTTLLRDAARMISMGINEKHIPSQKVGIVDERSEIAGCVKGIPQFELG 196
Query: 246 NARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
N R+ V ++ + + ++ + + P V+++DEIG ++ A G+ + T HG
Sbjct: 197 N--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRAEDSEAILEAVNAGVCIWTTVHGR 254
Query: 306 TIENLIMNPSLEMLI 320
+++ P+L +I
Sbjct: 255 KWKDVFQRPTLRPII 269
>gi|295093404|emb|CBK82495.1| stage III sporulation protein AA [Coprococcus sp. ART55/1]
Length = 310
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSG-SANLLQDLVQDGASL--LFIGPPGVGKTTIIREI 212
RI IR+ I L RV + G S ++L + DG + L + P GKTT++R+I
Sbjct: 115 RIKCIRH----ISFLNIRVAHEIKGCSGDVLPYIYSDGKLMNTLIVSAPCHGKTTLLRDI 170
Query: 213 ARVLANDYKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMP 271
RV++ D V +VD SEI +P +G R V + + ++ V P
Sbjct: 171 IRVVS-DGGMTVGVVDERSEIAACYKGVPQNDVG--MRTDVLDCCPKASGMMMLVRTMAP 227
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+I +DEIG + + A + G +L+ATAHG +++++
Sbjct: 228 DLIAVDEIGGQQDVDAIFGVINCGCRLLATAHGYSMDDV 266
>gi|205374061|ref|ZP_03226861.1| mutants block sporulation after engulfment [Bacillus coahuilensis
m4-4]
Length = 294
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKK-----RVMIVDTSSEIGGN-GDIPHPG 243
Q + IGPP GKTT++R++AR +++ + +V IVD SEI G +P
Sbjct: 134 QKWKHTMIIGPPQSGKTTLLRDLARFVSSGNGQGIPSFKVGIVDERSEIAGCVKGVPQLE 193
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
+GN R+ V + + + ++ + + P V+V+DEIG K + A G+ L+ + H
Sbjct: 194 LGN--RVDVLDGCPKVEGMMMLIRSMSPDVLVVDEIGRKEDGDAILEAVNAGVTLMMSIH 251
Query: 304 GVTIENL 310
G +++++
Sbjct: 252 GSSLQDV 258
>gi|158320654|ref|YP_001513161.1| sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
gi|158140853|gb|ABW19165.1| Sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
Length = 351
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSA-NLLQDLVQDG 192
H VG +DN GI RTL S GL R+ R G A +L ++
Sbjct: 125 HRIGIVGKVLLDNN-GI-RTLKNYS----------GLNIRISREKLGVATGVLPHIINAK 172
Query: 193 ASL---LFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIGGN-GDIPHP 242
L L + PP GKTT++R++ R+++ N +V +VD SE+G +P
Sbjct: 173 GELMNTLIVSPPQCGKTTLLRDVIRMVSTGVPHMNFRGLKVGVVDERSELGACFQGVPQN 232
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R + +S + + ++ + PQVI DEIG + + +A GI+L+ T
Sbjct: 233 DLG--PRTDILDSCPKAEGIMMLIRAMSPQVIATDEIGREEDMIAIDEAIMAGIKLITTV 290
Query: 303 HGVTIENLI 311
H ++EN++
Sbjct: 291 HSRSLENIL 299
>gi|336421575|ref|ZP_08601732.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000459|gb|EGN30609.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
Length = 312
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQ------ITVHH 131
R+L +LP +RI + + YE ++ + KPL G+ + Q +T
Sbjct: 5 RILNVLPRSVRILIHKEQLQYEHLQEIKLRVEKPLLLIYRGEELILGGQRGKPYMVTKED 64
Query: 132 IEHATSQVGDFAV----------------DNRAGIS-RTLHRISAIRNRKGAIIGLTCRV 174
+ + ++++ +R G++ + + ++N K I + R+
Sbjct: 65 VREMLEYISNYSLYAYEQEMKQGFITIEGGHRVGMTGQAIIENGKVKNLK-HISSVNVRM 123
Query: 175 GRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIV 227
V G A+ + + SL L I PP GKTT++R++ R ++ ND+ + V +V
Sbjct: 124 SHEVLGCADKVFPYITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVV 183
Query: 228 DTSSEIGG---NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
D SEIGG H GI R V + + + +I + + P+VI +DEIG+ +
Sbjct: 184 DERSEIGGCYMGVAQNHLGI----RTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAED 239
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A G +++AT H ++E L P L+ +I
Sbjct: 240 VHAIEYAMHCGCKMLATVHAGSMEELRKKPLLDQMI 275
>gi|431794356|ref|YP_007221261.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784582|gb|AGA69865.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 349
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 147 RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSA-NLLQDLVQDGASL---LFIGPPG 202
+ G +TL ISA L RV +AV G A ++L L++ SL L + PP
Sbjct: 137 KQGQVQTLKHISA----------LNIRVAKAVEGKAEHILPKLLKRDGSLYHTLILSPPR 186
Query: 203 VGKTTIIREIARVLAND------YKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNS 255
GKTT++R++ + +++ + V +VD E+ G IP +G R + +
Sbjct: 187 AGKTTLLRDLIQKISDGSPTLHTQGQTVGVVDERRELAGMWQGIPAYNLGY--RTDILDG 244
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ + + + PQVI +DE+G + A + G+++++TAH + +E + P+
Sbjct: 245 CPKRMGINMLIRSMSPQVIAVDELGHPEDVEAVLDALRTGVKILSTAHALNLEEALSRPT 304
Query: 316 LEML 319
L +L
Sbjct: 305 LRVL 308
>gi|442804014|ref|YP_007372163.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739864|gb|AGC67553.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 369
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 156 RISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV----QDGASLLFIGPPGVGKTTIIRE 211
RI IR+ I L R+ R + G + + + +D + L I PPG+GKTT++R+
Sbjct: 124 RIINIRD----ISSLNIRIAREIIGFGDGVVKSIFRNRRDIYNTLIISPPGMGKTTLLRD 179
Query: 212 IARVLANDYKK-----RVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEA 265
I R +++ + V +VD SEI +P +G R V N + + +
Sbjct: 180 IIRSVSSGVENIFDGLNVGVVDERSEIAACYRGVPQNNLG--YRTDVINGINKKEGMEIL 237
Query: 266 VENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
+ + P+VI +DE+G + + G++++ATAHG + +L
Sbjct: 238 LRSMSPRVIAVDELGNPDDVYTVLKVMNAGVRILATAHGFDVASL 282
>gi|357038632|ref|ZP_09100429.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359424|gb|EHG07186.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
Length = 350
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 169 GLTCRVGRAVSGSAN-----LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY--- 220
GL RV R + G+A+ L+ V + + PP GKTT++R++ R ++N
Sbjct: 150 GLNIRVCREIKGAADGLIKHLIDRKVNNVYHTVIFSPPRCGKTTLLRDLVRQVSNGVPGL 209
Query: 221 ---KKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
+ V +VD SEI G + +P +G R V + + + ++ + P VIV
Sbjct: 210 HFAGRTVGVVDERSEIAGCHRGVPQMDVGV--RTDVLDGCPKAQGMMILLRAMSPDVIVT 267
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG + A + G++++ T HG ++ L P+L+ ++
Sbjct: 268 DEIGRMEDIHALEEVFNAGVRVIVTIHGSSLRELTNRPALKYML 311
>gi|323485467|ref|ZP_08090813.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323694458|ref|ZP_08108628.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|355628505|ref|ZP_09049787.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
gi|323401115|gb|EGA93467.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323501446|gb|EGB17338.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|354819754|gb|EHF04192.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
Length = 330
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGAS-----LLFIGPPGVGKTTIIREIARVLAND----- 219
L R+ V G A+ + + D + L I PP GKTT++R+I R ++
Sbjct: 134 LNIRLSHQVRGCADKIMPYLYDDKTGEFLHTLIISPPRCGKTTLLRDIVRQASDGGSSGK 193
Query: 220 ---YKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
K V +VD SEIG IP +G R + + + ++ + + P V+
Sbjct: 194 RVRAGKTVGVVDERSEIGACFQGIPQNDVG--LRTDILDCCPKAAGMMMLIRSMAPDVVA 251
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+DEIG + A + G +++AT HG ++E++ P
Sbjct: 252 VDEIGGDPDLEALRCVMNCGCRILATVHGTSMEDIRNKPGF 292
>gi|295695388|ref|YP_003588626.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
gi|295410990|gb|ADG05482.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
Length = 348
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDG----ASLLFIGPPGVGKTTIIREIARVLA-NDYK 221
I GL R+ + V G + +L + DG AS L + PP GKTT++R++A L+ +
Sbjct: 139 ITGLNFRIAKPVVGVSRVLAPWLIDGMCRPASTLILSPPQCGKTTLLRDLAYHLSIGAWH 198
Query: 222 KRV-----MIVDTSSEIGGNGDIPH-PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
RV +VD SE+ G H +G R V + + + ++ V + P+V++
Sbjct: 199 PRVPPLKVAVVDERSELAGTFQGRHYHDLGP--RTDVLDGCPKAEGMMMMVRSMSPEVLI 256
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGG 322
DE+G + A G+ ++A+AH ++++ P+L L+ G
Sbjct: 257 TDEVGGAADIAALMEAVGSGVVVLASAHAASLDDAESRPALRPLLEG 303
>gi|219669535|ref|YP_002459970.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
gi|219539795|gb|ACL21534.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
Length = 361
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 167 IIGLTCRVGRAVSGSANLL--QDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA----- 217
I L R+ +AV G A L+ + L ++G L + PP GKTT++R++ R L+
Sbjct: 157 ISALNIRLAKAVEGKAELILPKLLTKEGTLHHTLILSPPRAGKTTLLRDLIRRLSDGSPA 216
Query: 218 -NDYKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
N + V +VD E+ G IP +G R + + + + + + PQV+
Sbjct: 217 LNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTDILDGCPKRMGINMLIRSMAPQVVA 274
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+DE+G + A + G+++++TAH T+ + P+L+ L
Sbjct: 275 VDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRRPTLKAL 318
>gi|261366974|ref|ZP_05979857.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
gi|282571092|gb|EFB76627.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
Length = 296
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 119 DFSLSDCQITVHHIEHATSQVGDFAV--DNRAGISRTLHRISAIRNRKGAIIGLTCRVGR 176
D L C+ +V+ E SQ G F + NR G++ HR + I L RV R
Sbjct: 72 DCFLQLCRYSVYAYEEELSQ-GFFTIRGGNRIGVAG--HRCTGGFT---TITSLNLRVAR 125
Query: 177 AVSGS--ANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIG 234
++ A + + L LL G PG GKTT +R + R L +D + V +VD E+
Sbjct: 126 WLTCDLPAPVCEYLTTGSGGLLVAGAPGSGKTTFLRTLVRYL-SDTDEIVCVVDERGELM 184
Query: 235 GNGDIPHPGIGNA-RRMQVPNSEMQHKVLIEAVENHM----PQVIVIDEIGTKLEAMAAS 289
+ D G A +R+ V E ++ + P+ IV DE+GT + A
Sbjct: 185 MSDD------GQAQQRLPVCCDVYTRCSKAEGIQMALRCMNPRYIVCDELGTTADTAAVE 238
Query: 290 TIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
GI +A+ H + + L P L L
Sbjct: 239 RGVASGICFLASVHCDSPQALQKKPQLARLC 269
>gi|423073519|ref|ZP_17062258.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
gi|361855597|gb|EHL07560.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
Length = 361
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 167 IIGLTCRVGRAVSGSANLL--QDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA----- 217
I L R+ +AV G A L+ + L ++G L + PP GKTT++R++ R L+
Sbjct: 157 ISALNIRLAKAVEGKAELILPRLLTKEGTLHHTLILSPPRAGKTTLLRDLIRRLSDGSPA 216
Query: 218 -NDYKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
N + V +VD E+ G IP +G R + + + + + + PQV+
Sbjct: 217 LNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTDILDGCPKRMGINMLIRSMAPQVVA 274
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+DE+G + A + G+++++TAH T+ + P+L+ L
Sbjct: 275 VDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRRPTLKAL 318
>gi|325290033|ref|YP_004266214.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
gi|324965434|gb|ADY56213.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
Length = 344
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 149 GISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGK 205
G R+L ISA L R+ + G LLQ L+ +D + L I PP GK
Sbjct: 133 GSVRSLKHISA----------LNIRIAHELEGETKLLQYLLDQEKDICNTLIISPPRAGK 182
Query: 206 TTIIREIARVLANDYK------KRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQ 258
TT++R + + L+N + V +VD EI G IP +G R + + +
Sbjct: 183 TTVLRMLIKTLSNGLPAIQLAGQPVGVVDERGEIAGIWQGIPAFDLGI--RTDILDRTPK 240
Query: 259 HKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEM 318
+ + + P V+ +DE+G + + + G++++ATAH +IE + +
Sbjct: 241 ALGIAMLIRSMSPSVVAVDELGAPEDVRSLEDAVRCGVKIIATAHAGSIEEIRERKQING 300
Query: 319 LIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTF 351
L+ +++ RR V + RKGP T
Sbjct: 301 LL---------EQKVFRRIV--LLSRRKGPGTL 322
>gi|421836386|ref|ZP_16270884.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
gi|409741749|gb|EKN41434.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
Length = 241
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 14/123 (11%)
Query: 170 LTCRVGRAVSGSANLLQD-LVQDGASL--LFIGPPGVGKTTIIREIARVLA------NDY 220
L R+ R + ++ L+ +V++G L + I PP GKTTIIR+I++ ++ N
Sbjct: 112 LNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGVDALNLK 171
Query: 221 KKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
K+V ++D SEI G NG +P +G R V ++ + + ++ A+ + P+VI+ DE
Sbjct: 172 GKKVSVIDERSEIAGSYNG-VPQLDVG--LRTDVLDNCPKSEGIVMAIRSMAPEVIICDE 228
Query: 279 IGT 281
IGT
Sbjct: 229 IGT 231
>gi|354558158|ref|ZP_08977414.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548883|gb|EHC18327.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
Length = 337
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 167 IIGLTCRVGRAVSGSA-NLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDYK- 221
I GL R+ +SG A +L L++ SL L + PP GKTT++R++ R +++
Sbjct: 140 ISGLNIRLALEISGQAPQILPRLIRADGSLYHTLILSPPRAGKTTLLRDLIRCISDGVPN 199
Query: 222 -----KRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
+ V +VD EI G HP R + + + + + + P+V+ +
Sbjct: 200 LSLKGQTVGVVDERGEIAGMWQ-GHPSYNLGCRTDILDGCPKAIGMSMLIRSMSPRVVAV 258
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRR 336
DE+G + A + G+ +++TAH + E P L+ L
Sbjct: 259 DELGHPQDVEAVLDALRTGVSVLSTAHAESGEEAKKRPVLKALFAS-------------- 304
Query: 337 GVQKTVL---ERKGPSTFSCAVEIVSKTELR 364
GV + ++ RKGP T ++ ++ ELR
Sbjct: 305 GVFERLVILSRRKGPGTVESIFDLKNQLELR 335
>gi|374993713|ref|YP_004969212.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
gi|357212079|gb|AET66697.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
Length = 353
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 146 NRAGISRT---LH-RISAIRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL---LF 197
NR GI+ LH I I++ I L R+ R +SG A+ +L L+ D ++ L
Sbjct: 137 NRVGITGKIILLHGNIQTIKH----ISSLNLRIARDISGLASKILPLLLSDDGNVRHTLI 192
Query: 198 IGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGNGD-IPHPGIGNARRM 250
I PP GKTT +R++ R ++N + V +VD E+ G +P +G +
Sbjct: 193 ISPPRAGKTTFLRDLIRSISNGVPQIGLRGLTVGVVDERGELAGMWQGVPTYDLG--LQT 250
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR-GIQLVATAHGVTIEN 309
+ +S + L V + PQV+ +DEIG ++ +AA T A R G++++ TAH + E
Sbjct: 251 DIMDSCPKASGLSMLVRSMSPQVVAMDEIG-HMDDVAAITDALRTGVRILCTAHASSFEE 309
Query: 310 LIMNPSLEMLI 320
P++ L+
Sbjct: 310 AHRRPAIAALL 320
>gi|317122021|ref|YP_004102024.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315592001|gb|ADU51297.1| AAA ATPase [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 21/151 (13%)
Query: 167 IIGLTCRVGRAVSG-SANLLQDLVQDG------ASLLFIGPPGVGKTTIIREIARVLAND 219
+ GL R RAV G +A LL LV+ G AS L +GPP GKTT++R++AR+
Sbjct: 175 VRGLVIRRARAVEGCAAPLLPWLVERGRAGPRLASTLLLGPPASGKTTLLRDLARLAGTG 234
Query: 220 YK-----KRVMIVDTSSEI--GGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQ 272
+RV +VD E+ GG D+ R + + Q +++ A+ P+
Sbjct: 235 LPGRLTAQRVAVVDERGELAAGGAFDL------GPRTAVLEHCPKQAGIVL-ALRALSPE 287
Query: 273 VIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
V++ DE+G +A+A + + G+ +VATAH
Sbjct: 288 VLITDELGGPGDAVAVADAVRAGVTVVATAH 318
>gi|225570621|ref|ZP_03779646.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
gi|225160634|gb|EEG73253.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
Length = 316
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIVDTSSEIGGNGDIPHPGIGN---AR 248
L I PP GKTT++R++ R ++ N + K V +VD SEIGG + G+
Sbjct: 148 LIISPPRCGKTTLLRDMIRQISDGNAWVKGMSVGVVDERSEIGGC----YMGVAQNHLGM 203
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R V + + + +I + + P+V+ +DEIG + A G +L+A+ HG ++E
Sbjct: 204 RTDVLDCCPKAEGMIMLIRSMSPEVVAVDEIGAAEDVHAVEYAMHCGCKLLASIHGASME 263
Query: 309 NLIMNPSLEMLI 320
+ P L L+
Sbjct: 264 EIRKKPLLGRLV 275
>gi|331084722|ref|ZP_08333810.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410816|gb|EGG90238.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGNGDIPHPGIGNAR--- 248
L I PPG GKTT++R++ R +++ + + V +VD SE+G H GI
Sbjct: 152 LIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGAC----HLGIAQNELGI 207
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + + + ++ + + P+++ +DEIG + A G +++AT HG ++
Sbjct: 208 RTDILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRMLATVHGTSMA 267
Query: 309 NLIMNPSLEMLI 320
+ P L+ LI
Sbjct: 268 EVQKKPVLQQLI 279
>gi|89895121|ref|YP_518608.1| hypothetical protein DSY2375 [Desulfitobacterium hafniense Y51]
gi|89334569|dbj|BAE84164.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 330
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 167 IIGLTCRVGRAVSGSANLL--QDLVQDGA--SLLFIGPPGVGKTTIIREIARVLA----- 217
I L R+ +AV G A L+ + L ++G L + PP GKTT++R++ R L+
Sbjct: 126 ISALNIRLAKAVEGKAELILPRLLTKEGTLHHTLILSPPRAGKTTLLRDLIRRLSDGSPA 185
Query: 218 -NDYKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
N + V +VD E+ G +P +G R + + + + + + PQV+
Sbjct: 186 LNLPGQTVGVVDERRELAGMWQGVPAYNLGC--RTDILDGCPKRMGINMLIRSMAPQVVA 243
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML 319
+DE+G + A + G+++++TAH T+ + P+L+ L
Sbjct: 244 VDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRRPTLKAL 287
>gi|167758077|ref|ZP_02430204.1| hypothetical protein CLOSCI_00415 [Clostridium scindens ATCC 35704]
gi|167663974|gb|EDS08104.1| stage III sporulation protein AA [Clostridium scindens ATCC 35704]
Length = 312
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 78 RLLALLPEEMRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQ------ITVHH 131
R+L +LP +RI + + YE ++ + KPL G+ + Q +T
Sbjct: 5 RILNVLPRSVRILIHKEQLQYEHLQEIKLRVEKPLLLIYRGEELILGGQRGKPYMVTKED 64
Query: 132 IEHATSQVGDFAV----------------DNRAGIS-RTLHRISAIRNRKGAIIGLTCRV 174
+ + ++++ +R G++ + + ++N K I + R+
Sbjct: 65 VREMLEYISNYSLYAYEQEMKQGFITIEGGHRVGMTGQAIIENGKVKNLK-HISSVNVRM 123
Query: 175 GRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLA--NDYKK--RVMIV 227
V G A+ + + SL L I PP GKTT++R++ R ++ ND+ + V +V
Sbjct: 124 SHEVLGCADKVFPHITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVV 183
Query: 228 DTSSEIGG---NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE 284
D SEIGG H GI R V + + + +I + + P+VI +DEIG+ +
Sbjct: 184 DERSEIGGCYMGVAQNHLGI----RTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAED 239
Query: 285 AMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
A G +++AT H ++E L P L+ +I
Sbjct: 240 VHAIEYAMHCGCKMLATVHAGSMEELRKKPLLDRMI 275
>gi|325661685|ref|ZP_08150308.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471938|gb|EGC75153.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGNGDIPHPGIGNAR--- 248
L I PPG GKTT++R++ R +++ + + V +VD SE+G H G+
Sbjct: 152 LIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGAC----HLGVAQNELGI 207
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + + + ++ + + P+++ +DEIG + A G +++AT HG ++
Sbjct: 208 RTDILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRMLATVHGTSMA 267
Query: 309 NLIMNPSLEMLI 320
+ P L+ LI
Sbjct: 268 EVQKKPVLQQLI 279
>gi|392426588|ref|YP_006467582.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
gi|391356551|gb|AFM42250.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
Length = 340
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 167 IIGLTCRVGRAVSG-SANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLANDY-- 220
I L R+ R G S +L + + +L L I P GKTT++R++ R+++N
Sbjct: 146 ISSLNVRLARDYQGHSLRVLPKICRKDGTLYHTLVISAPRAGKTTLLRDLIRLISNGVPQ 205
Query: 221 ----KKRVMIVDTSSEIGG-NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIV 275
+ V ++D E+ G N +P +G R V + + + + + PQV+V
Sbjct: 206 MGLEGQSVGVIDERGELAGMNKGLPSYNLGC--RTDVLDGCPKVYGMTMLIRSMAPQVVV 263
Query: 276 IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+DE+G E A + G++++ TAH ++E P+L L+
Sbjct: 264 MDELGHHDEIEALKDALRTGVRILCTAHASSLEEAKTRPTLSYLL 308
>gi|147677501|ref|YP_001211716.1| hypothetical protein PTH_1166 [Pelotomaculum thermopropionicum SI]
gi|146273598|dbj|BAF59347.1| Uncharacterized protein conserved in bacteria [Pelotomaculum
thermopropionicum SI]
Length = 329
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 173 RVGRAVSGSANLLQDLVQD--GASL---LFIGPPGVGKTTIIREIARVLANDYKK----- 222
R+ R V G+A + V D G S+ + + PP GKTT++R++ R ++N
Sbjct: 135 RICREVKGAATKVLPYVIDRHGGSIYHTVLVSPPRCGKTTMLRDMVRQISNGIPALGFPG 194
Query: 223 -RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIG 280
V +VD SEI G +P +G R V + + + ++ + + P+VI DEIG
Sbjct: 195 LTVGLVDERSEIAGCYRGVPKLDVGI--RTDVLDGCPKAEGMMMLLRSMSPRVIAADEIG 252
Query: 281 TKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 316
+ + A + G++++ TAHG ++ L P+L
Sbjct: 253 RQEDVDALEEVLNAGVKVLITAHGSSLAELAERPAL 288
>gi|374579571|ref|ZP_09652665.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
gi|374415653|gb|EHQ88088.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
Length = 354
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLLF----IGPPGVGKTTIIREIARVLANDYKK--- 222
L R+ R V G + L+ D +F I PP GKTT++R++ R ++N +
Sbjct: 163 LNLRIARDVPGLGLKILPLLLDEEGGIFHTLLISPPRAGKTTLLRDLIRSISNGVPQLGL 222
Query: 223 ---RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
V +VD E+ G +P +G R + + + + + V + PQV+ +DE
Sbjct: 223 RGQTVGVVDERGELAGMWQGVPTYDLGY--RTDILDGCPKARGMSIMVRSMSPQVLAVDE 280
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
+G + + +A + + G+Q+++TAH TIE P + L+
Sbjct: 281 LGHREDVIAIADALRTGVQILSTAHAGTIEEARSRPVISNLL 322
>gi|167770749|ref|ZP_02442802.1| hypothetical protein ANACOL_02095 [Anaerotruncus colihominis DSM
17241]
gi|167667344|gb|EDS11474.1| putative stage III sporulation protein AA [Anaerotruncus
colihominis DSM 17241]
Length = 318
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 119 DFSLSDCQITVHHIEHATSQVGDFAV--DNRAGISRTL----HRISAIRNRKGAIIGLTC 172
D +S C VH + + G AV +RAG++ T ++++R+ I +
Sbjct: 79 DCFVSLCGWAVHSHQREMAD-GYIAVRGGHRAGVAATAVVEDGLVASVRD----ITSINL 133
Query: 173 RVGRAVSGSAN-LLQDLVQD-GASLLFIGPPGVGKTTIIREIARVLAND----YKKRVMI 226
R+ R + G A+ L++ D LL G P GKTT++R++AR L++ Y+K V +
Sbjct: 134 RIAREIFGCADQLIRGYFMDRPCGLLLAGAPASGKTTLLRDLARQLSSGTPGVYRK-VCV 192
Query: 227 VDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEA 285
VD S EIG + G + +G + + K L A+ P++I+ DEI T+ E
Sbjct: 193 VDESGEIGASSGGLIQNDLGPC--CDLLAGYPKAKGLQIAIRYLSPEIIICDEIATEAEI 250
Query: 286 MAASTIAQRGIQLVATAHGVTIENL 310
A + G+ +V + H + E L
Sbjct: 251 EAVAAAVNSGVAVVTSVHAASFEEL 275
>gi|325680699|ref|ZP_08160237.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
gi|324107479|gb|EGC01757.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
Length = 294
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 173 RVGRAVSGSAN--LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTS 230
RV R V G A+ + +S+L G P GKTTI+R++ R+ Y R ++D
Sbjct: 118 RVPREVKGCASDIFCKCFSDRPSSVLIFGAPSSGKTTILRDLTRMCGMVY--RTTLIDER 175
Query: 231 SEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAAST 290
E+ + P V + + + AV PQ+IV DEIG+ + ++ +
Sbjct: 176 GELAAV-YLGRPMNDVGLLTDVFDKYPRKNAIETAVRVMSPQIIVCDEIGSSEDVLSLTY 234
Query: 291 IAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGVQNVTL 328
G++LV + H + E L ++ E+L G+ + T+
Sbjct: 235 ALDSGVKLVCSCHCDSFEELNSKANICELLSAGIFDYTV 273
>gi|345019757|ref|ZP_08783370.1| stage III sporulation protein AA [Ornithinibacillus scapharcae
TW25]
Length = 328
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYK----KRVMIVDTSSEIGGN-GDIPHPGIGNARRM 250
L +G P GKTT+IR+I R++++ +K K+V +VD SEI IP +G RR
Sbjct: 141 LIVGSPQSGKTTLIRDIIRIISSGWKTIPPKKVGVVDERSEIAACLKGIPQHNLG--RRT 198
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V ++ + + ++ + + P+++V+DEIG+ + A G+ ++ T HG T++ L
Sbjct: 199 DVLDACPKAEGMMMMIRSMSPEILVVDEIGSDKDVQALMNAINAGVTVICTIHGQTLDEL 258
Query: 311 IMNPSL 316
PS+
Sbjct: 259 KKRPSI 264
>gi|418035514|ref|ZP_12673971.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690503|gb|EHE90451.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 333
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 35/296 (11%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 20 MLEEAVRIRASDIFFLPKKGGYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 79
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D +D
Sbjct: 80 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFRDLVD 136
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+ A
Sbjct: 137 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAGA 194
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 195 R--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKST 246
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + +KGP +C +++ S+ +L
Sbjct: 247 YQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGKKGP---ACLLDLASREDL 294
>gi|104773768|ref|YP_618748.1| competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513772|ref|YP_812678.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|103422849|emb|CAI97507.1| Putative competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093087|gb|ABJ58240.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 323
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 35/296 (11%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 10 MLEEAVRIRASDIFFLPKKGGYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 69
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D +D
Sbjct: 70 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFRDLVD 126
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+ A
Sbjct: 127 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAGA 184
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 185 R--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKST 236
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + +KGP +C +++ S+ +L
Sbjct: 237 YQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGKKGP---ACLLDLASREDL 284
>gi|335356398|ref|ZP_08548268.1| type II secretion system protein E [Lactobacillus animalis KCTC
3501]
Length = 324
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 102 EVVMDLGRKPLARFP-SGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAI 160
E+ + +K LA F D LS EH Q+G A + G + R S +
Sbjct: 43 ELTFEQAQKLLAFFKFKADMMLS---------EHRRPQLG--AWQQKIGKQQLYLRFSTV 91
Query: 161 RN---RKGAIIGL-----TCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREI 212
+ R+ +I L + + V LL+ Q ++F GP G GKTT + ++
Sbjct: 92 GDFLGRESMVIRLIYPLKSVKYQYLVPEQWTLLEQACQKRGLVIFAGPMGSGKTTAMYQL 151
Query: 213 ARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMP 271
A+ N +++VM ++ EI + + ++QV P ++M + L++A H P
Sbjct: 152 AK---NQKQQQVMCIEDPIEIREDSFL---------QVQVNPKAQMDYSTLLKAALRHHP 199
Query: 272 QVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
+ ++ EI + A A T A G +++T H + +I
Sbjct: 200 DIFIVGEIRDRQTARAVLTAALSGHLVLSTLHATSAYGVI 239
>gi|392394445|ref|YP_006431047.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525523|gb|AFM01254.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 359
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 25/197 (12%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLL--QDLVQD 191
H G+ + N G +TL ISA L R+ +AV G A L+ + L ++
Sbjct: 134 HRVGITGEAIMKN--GEVQTLKHISA----------LNIRLAKAVEGRAELILPKLLTKE 181
Query: 192 GA--SLLFIGPPGVGKTTIIREIARVLA------NDYKKRVMIVDTSSEIGGNGD-IPHP 242
GA L + PP GKTT++R++ R L+ N + V +VD E+ G IP
Sbjct: 182 GALHHTLILSPPRGGKTTLLRDLIRRLSDGSPGLNLPGQTVGVVDERRELAGMWQGIPAY 241
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+G R + + + + + + PQV+ +DE+G + A + G+++++TA
Sbjct: 242 NLGC--RTDILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTA 299
Query: 303 HGVTIENLIMNPSLEML 319
H ++ + P+L L
Sbjct: 300 HASNMDEALKRPTLRSL 316
>gi|218289649|ref|ZP_03493869.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240299|gb|EED07482.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
Length = 335
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL-----LFIGPPGVGKTTIIREIARVLA---- 217
+ L R+ R G+A + + D AS L + PP GKTT++R++AR +
Sbjct: 133 VTSLNVRISRDHPGAAAAVLPSLYDRASRRPLSSLIVSPPQCGKTTLVRDVARRFSYGDF 192
Query: 218 --NDYKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+D+ +V ++D SEI G+ D +P +G R V + + + ++ A+ + P V+
Sbjct: 193 APDDHGLKVAVIDERSEIAGSVDGVPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVV 250
Query: 275 VIDEIGTKLEAMA 287
V DEIG +A A
Sbjct: 251 VTDEIGRMEDAEA 263
>gi|347532101|ref|YP_004838864.1| stage III sporulation protein AA [Roseburia hominis A2-183]
gi|345502249|gb|AEN96932.1| stage III sporulation protein AA [Roseburia hominis A2-183]
Length = 316
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 196 LFIGPPGVGKTTIIREIARVL----ANDYKKRVMIVDTSSEIGG-NGDIPHPGIGNARRM 250
L + PPG+GKTT +R++ R L A +V +VD SEI + IP +G R
Sbjct: 157 LMLSPPGIGKTTFLRDLIRQLSAGDAGAPGMKVGVVDERSEIAACHLGIPQNDLGP--RT 214
Query: 251 QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V + + + + + + PQ++ +DE+G K + A G +++ T H ++ L
Sbjct: 215 DVLDGCKKTEGIRMLLRSMSPQILAVDELGGKEDFAAVKQALCCGCRVLGTVHAGCVQEL 274
Query: 311 IMNPSLEMLI 320
+ P L+ +
Sbjct: 275 LDKPYLQACV 284
>gi|94311600|ref|YP_584810.1| hypothetical protein Rmet_2668 [Cupriavidus metallidurans CH34]
gi|93355452|gb|ABF09541.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 303
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 184 LLQDLVQDG-ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP 242
L + L+ DG A ++F GPPG GK+ REIAR+ D + RV V HP
Sbjct: 49 LTEALLADGFAGVVFSGPPGTGKSRYAREIARLFVEDDEARVFYVQF-----------HP 97
Query: 243 GIGNARRMQ--VPNSE----MQHKVLIEAV----ENHMPQVIVIDEIGTK------LEAM 286
G M+ VP S + KV ++A E P V+VIDE+ EA+
Sbjct: 98 GYQYEDFMESFVPTSSGGFAPKDKVFLQACRRASEVDGPVVLVIDELSRTDVVRVFGEAL 157
Query: 287 AASTIAQRGIQL-VATAHGVTI-ENLIMNPSLEMLIGGVQNVTLGDEEAHRR 336
++RG+ +A+ +I NLIM ++ GV+ + L E R
Sbjct: 158 TYLEKSKRGLSFQLASGRTTSIPNNLIMLATMNPWDRGVEEMDLALERRFAR 209
>gi|418029142|ref|ZP_12667690.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690860|gb|EHE90802.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 323
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 35/296 (11%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 10 MLEEAVRIRASDIFFLPKKGGYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 69
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D +D
Sbjct: 70 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFRDLVD 126
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+ A
Sbjct: 127 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNTGA 184
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 185 R--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKST 236
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + +KGP +C +++ S+ +L
Sbjct: 237 YQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGKKGP---ACLLDLASREDL 284
>gi|345861748|ref|ZP_08814000.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
gi|344325141|gb|EGW36667.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
Length = 315
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 170 LTCRVGRAVSGSANLLQDLV--QDG--ASLLFIGPPGVGKTTIIREIARVLANDYKK--- 222
L R+ R + G + L+ DG A L I PP GKTT++R++ R+++N +
Sbjct: 124 LNLRIARDIPGRGLKILPLLLGADGTFAHTLLISPPRAGKTTLLRDLIRLISNGVPQLGL 183
Query: 223 ---RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
V +VD E+ G +P +G R V + + + V + PQVI +DE
Sbjct: 184 MGLTVGVVDERGELAGMWQGVPTYNLG--YRTDVLDGCPKATGMNMIVRSMAPQVIAMDE 241
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGV 338
+G + A + G+++++TAH +IE P L L+ D+ A R V
Sbjct: 242 LGHADDVNALMDALRTGVRILSTAHASSIEEARNRPILAHLL---------DQGAFERLV 292
Query: 339 QKTVLERK-GPST 350
VL R+ GP T
Sbjct: 293 ---VLSRRHGPGT 302
>gi|410657082|ref|YP_006909453.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|410660119|ref|YP_006912490.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
gi|409019437|gb|AFV01468.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|409022475|gb|AFV04505.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
Length = 352
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGNGD-IPHPGIGNAR 248
L + PP GKTT++R + + L+N + V +VD SEI G IP +G
Sbjct: 181 LLVSPPRAGKTTMLRFLVKNLSNGVPQLNLKGHTVGVVDERSEIAGMWQGIPSFDLGC-- 238
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R V + + + LI + + P+V+ +DE+G + +A A + G++++AT H +++
Sbjct: 239 RTDVLDRCPKAQGLIMLIRSMAPEVVAVDELGGREDAAALGEAVRCGVKILATVHAGSLD 298
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER-KGPSTFSCAVEIVSKTEL 363
L L L+ + E R V VL R GP T ++ S L
Sbjct: 299 ELQKRAHLRELL---------NRETFERIV---VLSRANGPGTVETVYDMASGVNL 342
>gi|385815392|ref|YP_005851783.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325125429|gb|ADY84759.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 10 MLEEAVRIRASDIFFLPKKGGYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 69
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D +D
Sbjct: 70 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFRDLVD 126
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+ A
Sbjct: 127 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAGA 184
Query: 248 RRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
R + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 185 R--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKST 236
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + KGP +C +++ S+ +L
Sbjct: 237 YQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGEKGP---ACLLDLASREDL 284
>gi|257439784|ref|ZP_05615539.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
gi|257197804|gb|EEU96088.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 194 SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP 253
+L +G PG GKTT++R IAR L +K + ++D E+ G + + V
Sbjct: 182 GMLLVGEPGSGKTTLLRSIARELVRQ-QKILSVIDERREL-------FAGNTHGEALDVL 233
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ + + A+ PQVI++DE+G E A G+ +AT H T E M
Sbjct: 234 AGLPKGQAVQMALRTLSPQVILLDELGGLDEVTALEQGLFSGVDFIATLHAATPEEATMR 293
Query: 314 PSLEMLI 320
P ++ L+
Sbjct: 294 PQVKYLM 300
>gi|413937507|gb|AFW72058.1| hypothetical protein ZEAMMB73_092056 [Zea mays]
Length = 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 450 LIRLYVYGILEATVVQLIKQLQMDDAVQLTDNISEADALLALHSKLKKNSGIQAAAKSHD 509
++ +Y Y I EA ++Q+ + DD + +T ++ AD + A ++K+N I AAK H
Sbjct: 63 VLHVYTYQISEAGILQVATMMGFDDELDVTYDVGAADVIHAASFEMKQNHWIHTAAKYHK 122
Query: 510 IPIYATKTSSLVQITKALR 528
+P+ KT+ +VQ+ KA+R
Sbjct: 123 LPV---KTNMMVQV-KAIR 137
>gi|336427118|ref|ZP_08607122.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009971|gb|EGN39958.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 319
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
Query: 160 IRNRKGAIIGLTCRVGRAVSGSAN-LLQDLVQDGASL--LFIGPPGVGKTTIIREIARVL 216
IRN K I + R+ + G+A+ +L L ++G L L I PPG GKTT++R+I R +
Sbjct: 118 IRNIK-HISCINIRISHEIKGAADTVLPFLYREGRFLNTLIISPPGCGKTTLLRDIIRQV 176
Query: 217 A--NDYKKRVM--IVDTSSEIGGNGDIPHPGIGNAR-----RMQVPNSEMQHKVLIEAVE 267
+ N Y V IVD SEI G+ G A+ R + +S + + ++ +
Sbjct: 177 SDGNPYGGGVTVGIVDERSEIAGSFQ------GRAQNDVGLRTDILDSCPKAEGMMLLIR 230
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
+ P+VI +DE+G++ + A + G ++AT H
Sbjct: 231 SMAPKVIGVDELGSEEDIDAMKKVLSCGCAILATIH 266
>gi|225375604|ref|ZP_03752825.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
gi|225212583|gb|EEG94937.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
Length = 309
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAND---- 219
I+ L R+ G A + L++ S+ L + PG GKTT++R+ R L+N
Sbjct: 117 IMFLNIRIAHEKCGCARKILPLIRQRDSIYNTLILSMPGAGKTTLLRDSIRALSNGEAYG 176
Query: 220 YKKRVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDE 278
+ +V +VD SEI + +P +G R V + + + + + + PQ+I +DE
Sbjct: 177 IRLKVCVVDERSEIAASFHGVPQNDMGP--RTDVMDGCGKAEGMQLLIRSMSPQIIAVDE 234
Query: 279 IGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLE 317
+G + + A G +++ T H ++ L P L+
Sbjct: 235 LGAESDFYAVEQALNCGSRVLGTIHAGNMKELSEKPYLK 273
>gi|410584372|ref|ZP_11321475.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
gi|410504307|gb|EKP93818.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
Length = 403
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 167 IIGLTCRVGRAVSGSAN-LLQDLVQDG------ASLLFIGPPGVGKTTIIREIARVLAND 219
+ GL R R VSG A LL LV+ AS L IG P GKTT++R++AR+ +
Sbjct: 202 VRGLVIRRARPVSGCATPLLPYLVEPARPGPCLASTLLIGAPASGKTTLLRDLARLASAG 261
Query: 220 YK-----KRVMIVDTSSEI--GGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQ 272
+RV +VD E+ GG D+ R V + + A+ P+
Sbjct: 262 VPGTLAGRRVAVVDERGELAAGGAFDL-------GPRTAVLEHCPKEAGIPLALRALSPE 314
Query: 273 VIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
V+V DE+G +A A + G+ +VATAH ++ +L
Sbjct: 315 VLVTDELGGPHDAAAVAEAVHAGVTVVATAHAGSVADL 352
>gi|348667946|gb|EGZ07771.1| hypothetical protein PHYSODRAFT_250107 [Phytophthora sojae]
Length = 296
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 99 ELIEVVMDLGRKPLARFPSGD---FSLSDCQITVHHIEHATSQVGD---FAVDNRAGISR 152
+L++V +D+GR P S + I+ S +G DNRAGI R
Sbjct: 140 KLVDVCLDVGRVPYVYTGKKQRVVLSKHGATVAKDTIDEILSNLGGEMRIGDDNRAGIGR 199
Query: 153 TLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQ 190
LHRIS +R++ + GL RVGRA+ + +L D Q
Sbjct: 200 QLHRISVMRSKTDEVYGLPMRVGRALRNATCVLTDQQQ 237
>gi|160945210|ref|ZP_02092436.1| hypothetical protein FAEPRAM212_02729 [Faecalibacterium prausnitzii
M21/2]
gi|158442941|gb|EDP19946.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii M21/2]
Length = 302
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 143 AVDNRAGISRTLHRISAIRNRKGAIIGL------TCRVGRA--VSGSANLLQDLVQDGAS 194
AV NR G++ R+G I L R+ R+ + L + L Q
Sbjct: 105 AVGNRVGVA------GQFVQREGQCIALQKVTSLNLRIARSCVIPLPPALDKLLEQHFTG 158
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP-----GIGNARR 249
LL +G PG GKTT++R IAR LA + ++ V ++D E+ P G+ AR
Sbjct: 159 LLVVGEPGSGKTTLLRTIARTLA-ERQRLVAVIDERGELFPPEGPLPPLERIGGVDKARA 217
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
+Q+ A+ PQVI++DE+G+ E MA G+ +A+ H
Sbjct: 218 VQM------------ALRTLAPQVILLDELGSLEETMALEQGFFSGVDFIASIHAPDAAQ 265
Query: 310 LIMNPSLEMLI 320
P ++ L+
Sbjct: 266 AQCRPQVQALL 276
>gi|78044260|ref|YP_360826.1| sporulation protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996375|gb|ABB15274.1| putative sporulation protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 315
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 167 IIGLTCRVGRAVSGSA-NLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYKK 222
+ + R+ R + G A ++ L+ + L + PP GKTT++R++AR+ AN +
Sbjct: 118 VCSINIRIAREIKGVAEKIVPYLINKNGEPVNTLILSPPRSGKTTMLRDLARIFANGSAQ 177
Query: 223 ------RVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
V IVD SEI P + R V + + + +I + + P++IV
Sbjct: 178 IGIPGIPVGIVDERSEIAACYK-GEPQLDVGIRADVLDGCPKAQGMIILLRSMAPKLIVT 236
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
DEIG + + A +A G+ + +AH +++L P
Sbjct: 237 DEIGREEDVGALIEVANAGVAVFTSAHARDMDDLKKRP 274
>gi|336396013|ref|ZP_08577412.1| competence protein [Lactobacillus farciminis KCTC 3681]
Length = 322
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 108 GRKPLARFPSGDFSLSDCQITVHHI---------EHATSQVG--DFAVDNRAGISRTLHR 156
R L + D + + + ++++ E +Q G +F NR + R
Sbjct: 35 ARNALQTYTVADLTTEETTMIMNYLKFNSGLDISERRRAQKGSFNFMYQNR----QIFIR 90
Query: 157 ISAI---RNRKGAIIGLTCRVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGKTTIIR 210
+SA+ +NR+ +I L S ++++L+ + +LF GP G GKT+++
Sbjct: 91 VSAVGDFKNRESMVIRLIYPQELVSPISEEIVENLLPIAKQKGMMLFAGPMGSGKTSLMY 150
Query: 211 EIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE--MQHKVLIEAVEN 268
+ R L+ YKKRVM ++ EI + + ++QV N E M ++ LI+
Sbjct: 151 ALTRQLS--YKKRVMCIEDPIEIVEDSFL---------QLQV-NEEAGMTYEELIKTTLR 198
Query: 269 HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
H P +++I EI A A A G +++T HG
Sbjct: 199 HRPGILIIGEIRDAKTAQQAIRAAICGYTVMSTIHG 234
>gi|313123375|ref|YP_004033634.1| type ii secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312279938|gb|ADQ60657.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 323
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 37/297 (12%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 10 MLEEAVRIRASDIFFLPKKGSYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 69
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D +D
Sbjct: 70 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFRDLVD 126
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+
Sbjct: 127 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFF-------- 176
Query: 248 RRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
+ QV + + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 177 -QAQVNAGAGISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKS 235
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + KGP +C +++ S+ +L
Sbjct: 236 TYQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGEKGP---ACLLDLASREDL 284
>gi|260893532|ref|YP_003239629.1| stage III sporulation protein AA [Ammonifex degensii KC4]
gi|260865673|gb|ACX52779.1| stage III sporulation protein AA [Ammonifex degensii KC4]
Length = 323
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 170 LTCRVGRAVSGSAN-LLQDLVQDG----ASLLFIGPPGVGKTTIIREIARVLANDYKK-- 222
L R+ R + G A L L+Q L + PP GKTT +R++ R +
Sbjct: 127 LNLRIAREIKGVATPFLPYLIQGNPPRVCHTLIVSPPRGGKTTFLRDLVRHFSWGLPALG 186
Query: 223 ----RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQH-KVLIEAVENHMPQVIVI 276
V +VD E+ +P IG + S+++ ++L+ A P+VI +
Sbjct: 187 FPGATVGLVDERGEVAACFRGVPQLDIGPRTDVLSNCSKVEGIRLLLRA---FAPEVIAM 243
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEML--IGGVQNVTLGDEEAH 334
DE+G E A G++++AT H ++E L P L +G V+ L
Sbjct: 244 DEVGRAEEVRAVEDALNAGVRVIATVHAGSLEELNRRPFFRFLSRLGVVERFVLLSRRGA 303
Query: 335 RRGVQKTVLERKG 347
RR Q TVL+ +G
Sbjct: 304 RR--QVTVLDGEG 314
>gi|430750198|ref|YP_007213106.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
gi|430734163|gb|AGA58108.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
Length = 331
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 173 RVGRAVSGSANLLQDLVQDGA-----SLLFIGPPGVGKTTIIREIARVL---------AN 218
RV R V G+A L + D A S L + PP GKTT++R+I R + A
Sbjct: 128 RVARDVRGAAARLLPHIADRARRSLMSTLIVAPPQQGKTTMLRDIIRSVSYGSWPMPEAR 187
Query: 219 DYKKR-VMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVI 276
D+ R V +VD SEI +P +G R V ++ + + ++ + + P+++
Sbjct: 188 DWPARKVGVVDERSEIAACVRGVPVFDVGP--RTDVLDACPKAEGMMMLLRSMSPELLAA 245
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
DEIG +A A A G+ ++ATAH +++ ++ LI
Sbjct: 246 DEIGRPEDAEAIREAAHAGVPVIATAHASDLQDARGRTAIRRLI 289
>gi|384135427|ref|YP_005518141.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289512|gb|AEJ43622.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 337
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL-----LFIGPPGVGKTTIIREIARVLA-NDY 220
+ L R+ R G+A + + D S L + PP GKTT++R++AR L+ D+
Sbjct: 135 VTSLNVRISRDHPGAAASVLPFLYDRVSRRPLSSLIVSPPQCGKTTLVRDVARRLSYGDF 194
Query: 221 KK-----RVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
+V ++D SEI G+ D IP +G R V + + + ++ A+ + P V+
Sbjct: 195 APDNPGLKVAVIDERSEIAGSVDGIPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVV 252
Query: 275 VIDEIGTKLEAMA 287
V DEIG +A A
Sbjct: 253 VTDEIGRMEDAEA 265
>gi|300813117|ref|ZP_07093495.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300495958|gb|EFK31102.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 323
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 37/297 (12%)
Query: 82 LLPEEMRIRVSE-----HPELYELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ +Y+L DL +P +G+ + Q + EH
Sbjct: 10 MLEEAVRIRASDIFFLPKKGIYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 69
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G L R+ A+ S D D
Sbjct: 70 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGED-SLVIRIIYALGESRYFFPDQFGDLVD 126
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+AR L+ K VM ++ E+
Sbjct: 127 LCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFF-------- 176
Query: 248 RRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
+ QV + + + L++A H P ++I EI + A A A G ++AT H +
Sbjct: 177 -QAQVNAGAGISYASLLKAALRHRPDALIIGEIRDEETAHLAVDAALSGHLVLATVHAKS 235
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + +KGP +C +++ S+ +L
Sbjct: 236 TYQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGKKGP---ACLLDLASREDL 284
>gi|258511760|ref|YP_003185194.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478486|gb|ACV58805.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 334
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL-----LFIGPPGVGKTTIIREIARVLAN--- 218
+ L R+ R G+A + + D S L + PP GKTT++R++AR +
Sbjct: 132 VTSLNVRISRDHPGAAASVMPFLYDRVSRRPLSSLIVSPPQCGKTTLVRDVARRFSYGDF 191
Query: 219 ---DYKKRVMIVDTSSEIGGNGD-IPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVI 274
D +V ++D SEI G+ D IP +G R V + + + ++ A+ + P V+
Sbjct: 192 ALVDPGLKVAVIDERSEIAGSVDGIPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVV 249
Query: 275 VIDEIGTKLEAMA 287
V DEIG +A A
Sbjct: 250 VTDEIGRMEDAEA 262
>gi|150390255|ref|YP_001320304.1| sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
gi|149950117|gb|ABR48645.1| Sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
Length = 346
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 155 HRIS----AIRNRKGA-----IIGLTCRVGRAVSGSA-NLLQDLVQDGASLL---FIGPP 201
HRI A++++ G GL RV R G A LL L+ +L + PP
Sbjct: 119 HRIGIVGKAVKDKTGVKTLKDFTGLNIRVAREKKGIALPLLSHLIDHNHEMLNTLIVSPP 178
Query: 202 GVGKTTIIREIARVLANDYKK------RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPN 254
GKTT++R+I R ++ ++ +V +VD SEI + + +G R V +
Sbjct: 179 QCGKTTLLRDIIRNISRGVEEISLKGHKVGVVDERSEIAASFQGVAQNDLG--PRTDVLD 236
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
+ + ++ + P VI DEIG + MA GI+L+ T HG +++ ++
Sbjct: 237 ACPKAIGMMMLIRAMSPDVIATDEIGRHEDGMAIEEAIMAGIKLITTVHGNSLDEIL 293
>gi|268608458|ref|ZP_06142185.1| stage III sporulation protein AA [Ruminococcus flavefaciens FD-1]
Length = 330
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 14/185 (7%)
Query: 140 GDFAVDN--RAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLF 197
G F ++N R GIS T +++ I + R+ R V G L G SL+
Sbjct: 97 GCFVLENGVRVGISGTFSEGGKLKD----ISSMNFRIARQVIGCGEELFSSTC-GRSLII 151
Query: 198 IGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG--NGDIPHPGIGNARRMQVPNS 255
G GKTTI+R++ R+ N K ++D+ +EI G P +G +
Sbjct: 152 CGAVNSGKTTILRDLCRLYGNAVK--CTLIDSRNEIAAVIKGK-PANDVGML--TDIITG 206
Query: 256 EMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPS 315
+ +H +I AV P I DEI + A G++ +AT H ++E L+
Sbjct: 207 KSRHDGIISAVRTLSPGYIFCDEIADSSDTEAIREGIGCGVKFIATIHADSVEELLRRSV 266
Query: 316 LEMLI 320
+ L+
Sbjct: 267 VRTLL 271
>gi|422845361|ref|ZP_16892071.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684533|gb|EGD26697.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 333
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 129/297 (43%), Gaps = 37/297 (12%)
Query: 82 LLPEEMRIRVSEHPEL-----YELIEVVMDLGRKPLARFPSGD--FSLSDCQITVHHIEH 134
+L E +RIR S+ L Y+L DL +P +G+ + Q + EH
Sbjct: 20 MLEEAVRIRASDIFFLPKKGSYKLRLRAGDLEERPSLTREAGNELINWFKYQAEMDIAEH 79
Query: 135 ATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGAS 194
QVG AV N AG L R+S++ + +G + L R+ A+ S D +D
Sbjct: 80 RRPQVGSMAV-NLAGQDYWL-RLSSVGDYRGEDL-LVIRIIYALGESRYFFPDQFRDLVG 136
Query: 195 LLFI-------GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L ++ GP G GKTT + E+ R L+ K VM ++ E+
Sbjct: 137 LCWLRGMIVTSGPTGSGKTTTMYELPRKLSQ--TKMVMTIEDPVEVYEESFF-------- 186
Query: 248 RRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
+ QV + + + L++A H P V++I EI + A A A G ++AT H +
Sbjct: 187 -QAQVNAGAGISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAKS 245
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTEL 363
I LE L GV+N L + Q+ + KGP +C +++ S+ +L
Sbjct: 246 TYQTI--SRLESL--GVKNNELVNCLTA-VSYQRLLPGEKGP---ACLLDLASREDL 294
>gi|385840145|ref|YP_005863469.1| ComG operon protein 1 [Lactobacillus salivarius CECT 5713]
gi|300214266|gb|ADJ78682.1| ComG operon protein 1 [Lactobacillus salivarius CECT 5713]
Length = 327
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ ++F GP G GKTT + +AR LAN+ K VM ++ E I P
Sbjct: 125 LQKACIKNGLIVFSGPMGSGKTTTMYNLARKLANE--KHVMSIEDPIE------IYEP-- 174
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
N ++QV N ++M + L++ H P V +I EI + A A A G ++ T H
Sbjct: 175 -NFLQLQVNNKAQMSYSELLKVALRHHPDVFLIGEIRDNMTAKVAINAALSGHLILTTVH 233
Query: 304 G 304
Sbjct: 234 A 234
>gi|167750486|ref|ZP_02422613.1| hypothetical protein EUBSIR_01462 [Eubacterium siraeum DSM 15702]
gi|167656637|gb|EDS00767.1| putative stage III sporulation protein AA [Eubacterium siraeum DSM
15702]
Length = 303
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 173 RVGRAVSGSANLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDT 229
R+ R G+A L L + LL +G GKTTI+R++ R + + RV ++D
Sbjct: 125 RIARQHYGAARDLLPLFESKCRSRGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDE 182
Query: 230 SSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
EI NG P + V + + +I AV P IV DE+G E++
Sbjct: 183 RQEIAAVYNGK---PCLDVGLMTDVFSGYGKSDGIIRAVRCMSPDYIVTDELGADAESIR 239
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI--GGVQNVTLGDEEAHR 335
+ G L+ TAH +IE N + +I G +Q++ L ++HR
Sbjct: 240 QAV--NSGSGLIMTAHADSIEEAYRNEGIRTVIDSGAIQHIAL--VQSHR 285
>gi|425054795|ref|ZP_18458297.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
gi|403035104|gb|EJY46509.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
Length = 334
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDF------AVDNRAGISRTLHRIS 158
MD+G K A+ + +SL ++ + S VGD+ + GIS TLHR
Sbjct: 90 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDYLQRESLVIRLLYGISETLHRCF 144
Query: 159 AIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN 218
+ R+ A +LQ + G LF GP G GKT+++ LA
Sbjct: 145 SSRD------------------FATILQKTARRGL-YLFSGPVGSGKTSLMYR----LAL 181
Query: 219 DYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVID 277
K++V+ ++ EI P ++Q+ P + L++ H P +++I
Sbjct: 182 KEKRQVITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIG 232
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
EI + A AA A G ++ AT H +E ++
Sbjct: 233 EIRDESTAHAAVRAALTGHRVFATVHARNLEGTLIR 268
>gi|291557678|emb|CBL34795.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
V10Sc8a]
Length = 303
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 173 RVGRAVSGSANLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDT 229
R+ R G+A L L + LL +G GKTTI+R++ R + + RV ++D
Sbjct: 125 RIARQHYGAARDLLPLFESKCRSRGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDE 182
Query: 230 SSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
EI NG P + V + + +I AV P IV DE+G E++
Sbjct: 183 RQEIAAVYNGK---PCLDVGLMTDVFSGYGKTDGIIRAVRCMSPDYIVTDELGADAESIK 239
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI--GGVQNVTLGDEEAHR 335
+ G L+ TAH +IE N + +I G +Q++ L ++HR
Sbjct: 240 QAV--NSGSGLIMTAHADSIEEAYRNEGIRTVIDSGAIQHIAL--VQSHR 285
>gi|227891632|ref|ZP_04009437.1| competence protein ComGA [Lactobacillus salivarius ATCC 11741]
gi|417787947|ref|ZP_12435630.1| late competence protein ComGA, access of DNA to ComEA
[Lactobacillus salivarius NIAS840]
gi|418961039|ref|ZP_13512926.1| ComG operon protein 1 [Lactobacillus salivarius SMXD51]
gi|227866548|gb|EEJ73969.1| competence protein ComGA [Lactobacillus salivarius ATCC 11741]
gi|334308124|gb|EGL99110.1| late competence protein ComGA, access of DNA to ComEA
[Lactobacillus salivarius NIAS840]
gi|380344706|gb|EIA33052.1| ComG operon protein 1 [Lactobacillus salivarius SMXD51]
Length = 327
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ ++F GP G GKTT + +AR LAN+ K VM ++ E I P
Sbjct: 125 LQKACIKNGLIVFSGPMGSGKTTTMYNLARKLANE--KHVMSIEDPIE------IYEP-- 174
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
N ++QV N ++M + L++ H P V +I EI + A A A G ++ T H
Sbjct: 175 -NFLQLQVNNKAQMSYSELLKVALRHHPDVFLIGEIRDNMTAKVAINAALSGHLILTTVH 233
Query: 304 G 304
Sbjct: 234 A 234
>gi|421074477|ref|ZP_15535509.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
gi|392527518|gb|EIW50612.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
Length = 333
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLV--QDGASL--LFIGPPGVGKTTIIREIARVLA---N 218
+I GL R+ R V G A+ + + ++G L L I PP GKTTI+R++ R ++ N
Sbjct: 133 SINGLNIRLAREVKGCADQIIPYIITKEGQVLNTLIISPPRCGKTTILRDLIRQISMGSN 192
Query: 219 DYKKR-VMIVDTSSEIGGNGDIPHPGIGNAR---RMQVPNSEMQHKVLIEAVENHMPQVI 274
YK V +VD SEI GI R V ++ + ++ + + P V+
Sbjct: 193 IYKGLPVGVVDERSEIAA----CKSGISTVDLGIRTDVLDNCPKAMGMLMLIRSMSPAVV 248
Query: 275 VIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNP 314
DE+G + A G+ +V T HG + L+ P
Sbjct: 249 ATDELGRAEDIHAVREALNAGVSVVTTVHGKDLSELLHRP 288
>gi|417810680|ref|ZP_12457359.1| competence protein ComGA [Lactobacillus salivarius GJ-24]
gi|335349476|gb|EGM50976.1| competence protein ComGA [Lactobacillus salivarius GJ-24]
Length = 265
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ ++F GP G GKTT + +AR LAN+ K VM ++ E I P
Sbjct: 63 LQKACIKNGLIVFSGPMGSGKTTTMYNLARKLANE--KHVMSIEDPIE------IYEP-- 112
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
N ++QV N ++M + L++ H P V +I EI + A A A G ++ T H
Sbjct: 113 -NFLQLQVNNKAQMSYSELLKVALRHHPDVFLIGEIRDNMTAKVAINAALSGHLILTTVH 171
Query: 304 G 304
Sbjct: 172 A 172
>gi|291525262|emb|CBK90849.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
DSM 17629]
gi|291529279|emb|CBK94865.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
M104/1]
Length = 313
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAN--DYK 221
I L R+ + A L ++D S+ L I PG GKTT +R+ R+L++ D K
Sbjct: 104 IASLNIRIAHQIRDVAMPLMPYIRDENSIYNTLVISRPGEGKTTFLRDCIRILSDGCDGK 163
Query: 222 K--RVMIVDTSSEIGGNG-DIPHPGIGNARRM--QVPNSEMQHKVLIEAVENHMPQVIVI 276
+V +VD SEI + IGN+ + P S + ++L+ ++ P VI +
Sbjct: 164 NALKVSVVDERSEIAACYLGVAQNDIGNSSDVLDNCPKS-LGMRMLLRSMS---PDVIAV 219
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
DE+G + + A + + GI+++ + HG ++L
Sbjct: 220 DELGGESDIEALNQLVSCGIRILGSVHGTNADDL 253
>gi|90961401|ref|YP_535317.1| ComG operon protein 1 [Lactobacillus salivarius UCC118]
gi|90820595|gb|ABD99234.1| ComG operon protein 1 [Lactobacillus salivarius UCC118]
Length = 327
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ ++F GP G GKTT + +AR LAN+ K VM ++ E I P
Sbjct: 125 LQKACIKNGLIVFSGPMGSGKTTTMYNLARKLANE--KHVMSIEDPIE------IYEP-- 174
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
N ++QV N ++M + L++ H P + +I EI + A A A G ++ T H
Sbjct: 175 -NFLQLQVNNKAQMSYSELLKVALRHHPDIFLIGEIRDNMTAKVAINAALSGHLILTTVH 233
Query: 304 G 304
Sbjct: 234 A 234
>gi|366086384|ref|ZP_09452869.1| type II secretory pathway/competence component,AtPase
[Lactobacillus zeae KCTC 3804]
Length = 289
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDL---- 188
EH Q+G F + + R L ++ R R+ ++ L + A G+ LL L
Sbjct: 66 EHRRVQLGAFYQEAPSVFLR-LSSVADYRGRESLVVRLISGIPDA-DGARQLLDRLMSVL 123
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 124 LQRRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|365134919|ref|ZP_09343478.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613246|gb|EHL64764.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 308
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNA 247
L G LL G PG GKTT++R + L+ +K +VD EI P G
Sbjct: 148 LCAPGVGLLIAGAPGSGKTTLLRAVLAELSAAGRK-TAVVDERFEIA-----PVEQSGFC 201
Query: 248 RRM----QVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
R+ V + +H + A+ P VIV DE+G + A + A G+ LV T H
Sbjct: 202 TRLPQHCDVLSGYPKHIGMQHALRALAPDVIVCDEVGAMEDIAAITQAANAGVGLVVTIH 261
Query: 304 GVTIENLIMNPSLEMLI 320
E L P L+
Sbjct: 262 APDAETLRRRPQYTALL 278
>gi|238924594|ref|YP_002938110.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
gi|238876269|gb|ACR75976.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
Length = 313
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 167 IIGLTCRVGRAVSGSANLLQDLVQDGASL---LFIGPPGVGKTTIIREIARVLAN--DYK 221
I L R+ + A L ++D S+ L I PG GKTT +R+ R+L++ D K
Sbjct: 104 IASLNIRIAHQIRDVAMPLMPYIRDENSIYNTLVISRPGEGKTTFLRDCIRILSDGCDGK 163
Query: 222 K--RVMIVDTSSEIGGNG-DIPHPGIGNARRM--QVPNSEMQHKVLIEAVENHMPQVIVI 276
+V +VD SEI + IGN+ + P S + ++L+ ++ P VI +
Sbjct: 164 NALKVSVVDERSEIAACYLGVAQNDIGNSSDVLDNCPKS-LGMRMLLRSMS---PDVIAV 219
Query: 277 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
DE+G + + A + + GI+++ + HG ++L
Sbjct: 220 DELGGEGDIEALNQLVSCGIRILGSVHGTNADDL 253
>gi|301300042|ref|ZP_07206264.1| type II/IV secretion system protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852360|gb|EFK80022.1| type II/IV secretion system protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 280
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ ++F GP G GKTT + +AR LAN+ K VM ++ E I P
Sbjct: 125 LQKACIKNGLIVFSGPMGSGKTTTMYNLARKLANE--KHVMSIEDPIE------IYEP-- 174
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
N ++QV N ++M + L++ H P + +I EI + A A A G ++ T H
Sbjct: 175 -NFLQLQVNNKAQMSYSELLKVALRHHPDIFLIGEIRDNMTAKVAINAALSGHLILTTVH 233
Query: 304 G 304
Sbjct: 234 A 234
>gi|418070274|ref|ZP_12707549.1| type II secretory pathway/competence component,AtPase
[Lactobacillus rhamnosus R0011]
gi|357539694|gb|EHJ23711.1| type II secretory pathway/competence component,AtPase
[Lactobacillus rhamnosus R0011]
Length = 289
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + + L ++ R R+ ++ L + A G+ LL L+
Sbjct: 66 EHRRVQLGAF-YHRDSNVFLRLSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 123
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI +
Sbjct: 124 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|406915711|gb|EKD54764.1| hypothetical protein ACD_60C00045G0003 [uncultured bacterium]
Length = 760
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 59/236 (25%)
Query: 52 SKFSSVLFSDSRVSYSVNDDFDIELGRLLALLPEEMRIRVSEHPELYELIEVVMDLGRKP 111
+K S+ SD R+ D D E+G LLPE R ++ +H ++ +++
Sbjct: 389 AKLSARYISDRRLPDKALDLVD-EVGAYQYLLPEANRKKIIDHTDIEKVV--------AK 439
Query: 112 LARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLT 171
+AR P + S SD +I ++R L + ++ +G
Sbjct: 440 IARIPERNVSTSDREIL-------------------KNLTRDLKMMIFGQDEAVETLGAA 480
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLA--------NDYKKR 223
R+ R SG L+D V+ S LFIGP GVGKT + +++A+ L ++Y +R
Sbjct: 481 VRLSR--SG----LRDPVKPIGSFLFIGPTGVGKTEVSKQLAKQLGIELIRFDMSEYMER 534
Query: 224 VMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
+ S IG P +G + +L EAV H V+++DEI
Sbjct: 535 HTV---SRLIGA----PPGYVGYD----------EGGLLTEAVNKHPHSVVLLDEI 573
>gi|257888127|ref|ZP_05667780.1| type II/IV secretion system protein [Enterococcus faecium
1,141,733]
gi|257824181|gb|EEV51113.1| type II/IV secretion system protein [Enterococcus faecium
1,141,733]
Length = 317
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 73 MDIGEKRKAQLGALTYSLEKQKVRLQ-----LSSVGDY-LQRESLVIRLLYGISETPHR- 125
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA K++V
Sbjct: 126 -------CFNSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLIR 251
>gi|423078974|ref|ZP_17067649.1| type II/IV secretion system protein [Lactobacillus rhamnosus ATCC
21052]
gi|357548431|gb|EHJ30295.1| type II/IV secretion system protein [Lactobacillus rhamnosus ATCC
21052]
Length = 326
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + + L ++ R R+ ++ L + A G+ LL L+
Sbjct: 103 EHRRVQLGAF-YHRDSNVFLRLSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 160
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI P
Sbjct: 161 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEIN------QPQF---L 209
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 210 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 266
>gi|227552646|ref|ZP_03982695.1| competence protein ComGA [Enterococcus faecium TX1330]
gi|424764284|ref|ZP_18191727.1| ComG operon protein 1 family protein [Enterococcus faecium
TX1337RF]
gi|227178272|gb|EEI59244.1| competence protein ComGA [Enterococcus faecium TX1330]
gi|402419853|gb|EJV52126.1| ComG operon protein 1 family protein [Enterococcus faecium
TX1337RF]
Length = 334
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 90 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHR- 142
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA K++V
Sbjct: 143 -------CFNSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 187
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 188 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 238
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 239 TAHAAVRAALTGHRVFATVHARNLEGTLIR 268
>gi|293378664|ref|ZP_06624823.1| type II/IV secretion system protein [Enterococcus faecium PC4.1]
gi|431040317|ref|ZP_19492824.1| competence protein ComGA [Enterococcus faecium E1590]
gi|431750911|ref|ZP_19539605.1| competence protein ComGA [Enterococcus faecium E2620]
gi|431758285|ref|ZP_19546913.1| competence protein ComGA [Enterococcus faecium E3083]
gi|292642704|gb|EFF60855.1| type II/IV secretion system protein [Enterococcus faecium PC4.1]
gi|430562169|gb|ELB01422.1| competence protein ComGA [Enterococcus faecium E1590]
gi|430616169|gb|ELB53093.1| competence protein ComGA [Enterococcus faecium E2620]
gi|430617948|gb|ELB54812.1| competence protein ComGA [Enterococcus faecium E3083]
Length = 309
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 65 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA K++V
Sbjct: 118 -------CFNSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLIR 243
>gi|258507982|ref|YP_003170733.1| type II secretory pathway/competence component,AtPase
[Lactobacillus rhamnosus GG]
gi|385827664|ref|YP_005865436.1| type II secretion system protein [Lactobacillus rhamnosus GG]
gi|257147909|emb|CAR86882.1| Type II secretory pathway/competence component,ATPase
[Lactobacillus rhamnosus GG]
gi|259649309|dbj|BAI41471.1| type II secretion system protein [Lactobacillus rhamnosus GG]
Length = 289
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + + + L ++ R R+ ++ L + A G+ LL L+
Sbjct: 66 EHRRVQLGAFYHPD-SNVFLRLSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 123
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI +
Sbjct: 124 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|385834893|ref|YP_005872667.1| ATPase associated with various cellular activities family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|355394384|gb|AER63814.1| ATPase associated with various cellular activities family protein
[Lactobacillus rhamnosus ATCC 8530]
Length = 289
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + R L ++ R R+ ++ L + A G+ LL L+
Sbjct: 66 EHRRVQLGAFYHPDSDVFLR-LSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 123
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI +
Sbjct: 124 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|431763750|ref|ZP_19552299.1| competence protein ComGA [Enterococcus faecium E3548]
gi|430622123|gb|ELB58864.1| competence protein ComGA [Enterococcus faecium E3548]
Length = 309
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 65 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA K++V
Sbjct: 118 -------CFNSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLIR 243
>gi|257896982|ref|ZP_05676635.1| type II/IV secretion system protein [Enterococcus faecium Com12]
gi|257833547|gb|EEV59968.1| type II/IV secretion system protein [Enterococcus faecium Com12]
Length = 317
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 73 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHR- 125
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA K++V
Sbjct: 126 -------CFNSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLIR 251
>gi|291530816|emb|CBK96401.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
70/3]
Length = 303
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 173 RVGRAVSGSANLLQDLVQDGA---SLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDT 229
R+ R G+A L L + LL +G GKTTI+R++ R + + RV ++D
Sbjct: 125 RIARQHYGAARDLLPLFESECRSRGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDE 182
Query: 230 SSEIGG--NGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
EI NG P + V + + +I AV P IV DE+G +A +
Sbjct: 183 RQEIAAVYNGK---PCLDVGLMTDVFSGYGKSDGIIRAVRCMSPDYIVTDELGA--DAKS 237
Query: 288 ASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI--GGVQNVTLGDEEAHR 335
G L+ TAH +IE N + +I G +Q++ L ++HR
Sbjct: 238 IRQAVNSGSGLIMTAHADSIEEAYRNEGIRTVIDSGAIQHIAL--VQSHR 285
>gi|392377944|ref|YP_004985103.1| chaperone [Azospirillum brasilense Sp245]
gi|356879425|emb|CCD00337.1| chaperone [Azospirillum brasilense Sp245]
Length = 874
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 103 VVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDN--RAGISRTLHRISAI 160
++ DL R+ GD + + +T HI S+ VD + LH A+
Sbjct: 507 ILPDLERQLKEAEAQGDQRMLEEAVTAEHIAAVVSRWTGIPVDKMLEGEREKLLHMEGAL 566
Query: 161 RNR----KGAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVL 216
R R AI+ ++ V RA +G LQD + S LF+GP GVGKT + + +A L
Sbjct: 567 RQRVIGQDEAIVAVSNAVRRARAG----LQDPNRPMGSFLFLGPTGVGKTELTKALAEFL 622
Query: 217 ANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQV 273
+D + M+ SE + AR + P + ++ L EAV QV
Sbjct: 623 FDD--EHAMVRIDMSEFMEKHSV-------ARLIGAPPGYVGYEEGGSLTEAVRRRPYQV 673
Query: 274 IVIDEI 279
I+ DE+
Sbjct: 674 ILFDEV 679
>gi|229551835|ref|ZP_04440560.1| competence protein ComGA [Lactobacillus rhamnosus LMS2-1]
gi|229314779|gb|EEN80752.1| competence protein ComGA [Lactobacillus rhamnosus LMS2-1]
Length = 314
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + R L ++ R R+ ++ L + A G+ LL L+
Sbjct: 91 EHRRVQLGAFYHPDSDVFLR-LSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 148
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI P
Sbjct: 149 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEIN------QPQF---L 197
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 198 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 254
>gi|199597323|ref|ZP_03210754.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus rhamnosus HN001]
gi|199591839|gb|EDY99914.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus rhamnosus HN001]
Length = 289
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + R L ++ R R+ ++ L + A G+ LL L+
Sbjct: 66 EHRRVQLGAFYHPDSDVFLR-LSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 123
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI +
Sbjct: 124 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNPEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|339320222|ref|YP_004679917.1| ATP-dependent chaperone ClpB [Candidatus Midichloria mitochondrii
IricVA]
gi|338226347|gb|AEI89231.1| ATP-dependent chaperone ClpB [Candidatus Midichloria mitochondrii
IricVA]
Length = 862
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A++ ++ V R+ +G L D + S LF+GP GVGKT + + +A+ L ND KK ++
Sbjct: 574 AVVAVSNAVRRSRAG----LSDQDKPIGSFLFLGPTGVGKTELAKALAQFLFND-KKAIV 628
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
VD S + + AR + P + H+ VL EAV Q+I++DEI
Sbjct: 629 RVDMSECMEKH--------SVARLIGAPPGYVGHEEGGVLTEAVRRRPYQIILLDEI 677
>gi|392960834|ref|ZP_10326299.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|421054408|ref|ZP_15517376.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|421057110|ref|ZP_15520000.1| stage III sporulation protein AA [Pelosinus fermentans B3]
gi|421067733|ref|ZP_15529177.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|421071270|ref|ZP_15532390.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392440766|gb|EIW18426.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|392447186|gb|EIW24440.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392448088|gb|EIW25292.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|392454731|gb|EIW31553.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|392463665|gb|EIW39564.1| stage III sporulation protein AA [Pelosinus fermentans B3]
Length = 333
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 134 HATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--QD 191
H G +D AG +TL I+ GL R+ R V G A+ + + ++
Sbjct: 113 HRIGLTGQAIID--AGEVKTLKNIN----------GLNIRLAREVKGCADQIIPYIITKE 160
Query: 192 GASL--LFIGPPGVGKTTIIREIARVLANDYKKR----VMIVDTSSEIGGNGDIPHPGIG 245
G L L I PP GKTTI+R++ R ++ K V +VD SEI GI
Sbjct: 161 GQVLNTLIISPPRCGKTTILRDLIRQISMGSKIYKGLPVGVVDERSEIAA----CKSGIS 216
Query: 246 NAR---RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
R V ++ + ++ + + P V+ DE+G + A G+ +V T
Sbjct: 217 TVDLGIRTDVLDNCPKAMGMLMLIRSMSPAVVATDELGRAEDIHAVREALNAGVSVVTTV 276
Query: 303 HGVTIENLIMNPSLEMLI 320
HG + L+ P + L+
Sbjct: 277 HGKDLNELLHRPYIGELL 294
>gi|323339504|ref|ZP_08079782.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|417972857|ref|ZP_12613743.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
gi|323093073|gb|EFZ35667.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|346330774|gb|EGX99007.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
Length = 328
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 137 SQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL 196
S VGDF ++ + + R +++ + +K I R+ A Q +L
Sbjct: 90 STVGDF-LNRESLVVRLIYQEELQKTKKCFYIDQWDRLFSAC-----------QKRGLIL 137
Query: 197 FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE 256
GP G GKTT + E+AR + + K++M ++ EI R +QV +E
Sbjct: 138 LSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVEIA-----------EPRFLQVQVNE 183
Query: 257 ---MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
M + L++ H P V +I EI +L A A A G +++T H ++
Sbjct: 184 KAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHATSV 237
>gi|335997578|ref|ZP_08563492.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
gi|335350261|gb|EGM51758.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
Length = 328
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q +L GP G GKTT + E+AR + + K++M ++ EI R
Sbjct: 130 CQKRGLILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVEIA-----------EPR 175
Query: 249 RMQVPNSE---MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGV 305
+QV +E M + L++ H P V +I EI +L A A A G +++T H
Sbjct: 176 FLQVQVNEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHAT 235
Query: 306 TI 307
++
Sbjct: 236 SV 237
>gi|295100821|emb|CBK98366.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 293
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 185 LQDLVQDG-ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPG 243
L+D++Q +L +G P GKTT++R +AR LA + V ++D EI + +
Sbjct: 138 LRDILQQRFIGMLLMGEPDSGKTTLLRGVARELAKQ-NRAVAVIDERREIFPSEE----- 191
Query: 244 IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
A + + + + + + A+ PQVI++DE+G E A G++ +AT H
Sbjct: 192 -SAALPLDILSGIPKGQAVQMALRTLSPQVILLDELGGMDELYALEQGLFSGVEFIATLH 250
Query: 304 GVTIENLIMNPSLEML 319
+ E P ++ L
Sbjct: 251 AASWEEAARRPQVQYL 266
>gi|347525904|ref|YP_004832652.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
gi|345284863|gb|AEN78716.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
Length = 328
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 137 SQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDGASLL 196
S VGDF ++ + + R +++ + +K I R+ A Q +L
Sbjct: 90 STVGDF-LNRESLVVRLIYQEELQKTKKCFYIDQWDRLFSAC-----------QKRGLIL 137
Query: 197 FIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE 256
GP G GKTT + E+AR + + K++M ++ EI R +QV +E
Sbjct: 138 LSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVEIA-----------EPRFLQVQVNE 183
Query: 257 ---MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
M + L++ H P V +I EI +L A A A G +++T H ++
Sbjct: 184 KAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHATSV 237
>gi|410078782|ref|XP_003956972.1| hypothetical protein KAFR_0D01900 [Kazachstania africana CBS 2517]
gi|372463557|emb|CCF57837.1| hypothetical protein KAFR_0D01900 [Kazachstania africana CBS 2517]
Length = 1261
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D KK + DI +G A R
Sbjct: 388 VLFHGPPGTGKTLVARALAASCSSDSKKITFF------MRKGADILSKWVGEAER----- 436
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 437 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 478
>gi|390596936|gb|EIN06337.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 813
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLANDY-----KKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R++A + KKRV+ +D ++ + G+G R
Sbjct: 124 VLIGPPGVGKTAILEGLASRIVAGEVPESLQKKRVLSIDLAAIMAGSG----------VR 173
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
Q E + K LI+ +E+ +I IDE+ T + A G
Sbjct: 174 GQF---EEKFKALIKDIEDESGNIICFIDEVHTLFN--------------LGKAEGSIDA 216
Query: 309 NLIMNPSLE---MLIGGVQ----NVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVS-- 359
++ P+L L+G T+G + A R Q +E PS S + I+
Sbjct: 217 GQMIKPALARGLQLVGATTPDEYRKTIGKDAALERRFQPVTIEE--PSVAST-ISILRGL 273
Query: 360 KTELRVHHSLEATVDAILSGRI 381
KT VHH +E + A+++ +
Sbjct: 274 KTRYEVHHGVEISDGALVTAAV 295
>gi|365904734|ref|ZP_09442493.1| ComG operon protein 1 [Lactobacillus versmoldensis KCTC 3814]
Length = 322
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 156 RISAI---RNRKGAIIGLTCRVGRAVSGSANLLQDLV---QDGASLLFIGPPGVGKTTII 209
RIS++ NR+ +I L G +LL L+ Q ++F GP G GKT+++
Sbjct: 90 RISSVGDFLNRESMVIRLIYPQGDFTEHEIDLLNYLLPIAQRKGMMIFSGPMGSGKTSLM 149
Query: 210 REIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSE--MQHKVLIEAVE 267
+AR + ++K+VM ++ EI + ++QV NSE M ++ L++
Sbjct: 150 YSLARQIG--HRKKVMCIEDPIEIVEEDFL---------QLQV-NSEAGMTYEELVKTSL 197
Query: 268 NHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
H P++++I EI A A + G + T HG
Sbjct: 198 RHRPELLIIGEIRDAQTAKQAIQASLCGYTIFTTIHG 234
>gi|443925216|gb|ELU44103.1| DNA replication factor [Rhizoctonia solani AG-1 IA]
Length = 302
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ NDYKK+++ ++ S + G
Sbjct: 67 LLFYGPPGTGKTSTIVAVARRIYGNDYKKQILELNASDDRG 107
>gi|167587838|ref|ZP_02380226.1| flagellar biosynthesis regulator FlhF [Burkholderia ubonensis Bu]
Length = 365
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 124 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 183
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A +Q+ SE+++K VLI+ + V D+I A+T QR
Sbjct: 184 LGVPVHAVKDAGDLQLALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANTPVQR 240
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ + + L G + +T DE H GV TV+
Sbjct: 241 LLLLNATSHGDTLNEVVQAYRSAAGHPDAASAELAGCI--LTKLDEATHLGGVLDTVIRY 298
Query: 346 KGP 348
K P
Sbjct: 299 KLP 301
>gi|365760497|gb|EHN02213.1| Yta7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1386
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 454 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 502
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P VI DEI +K E + AS ++
Sbjct: 503 ---QLRLLFEEAKKHQPSVIFFDEIDGLAPVRSSKQEQIHASIVS 544
>gi|50302983|ref|XP_451429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640560|emb|CAH03017.1| KLLA0A09823p [Kluyveromyces lactis]
Length = 1319
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A +N+ +K + + DI +G A R
Sbjct: 441 VLFHGPPGTGKTLMARALAASCSNEKRKITFFMRKGA------DILSKWVGEAER----- 489
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI 279
Q ++L E + H P +I DEI
Sbjct: 490 ---QLRLLFEEAKKHQPAIIFFDEI 511
>gi|448428968|ref|ZP_21584513.1| type II secretion system protein E [Halorubrum terrestre JCM 10247]
gi|448449834|ref|ZP_21591929.1| type II secretion system protein E [Halorubrum litoreum JCM 13561]
gi|448510828|ref|ZP_21616041.1| type II secretion system protein E [Halorubrum distributum JCM
9100]
gi|448523687|ref|ZP_21618874.1| type II secretion system protein E [Halorubrum distributum JCM
10118]
gi|445675343|gb|ELZ27874.1| type II secretion system protein E [Halorubrum terrestre JCM 10247]
gi|445695582|gb|ELZ47684.1| type II secretion system protein E [Halorubrum distributum JCM
9100]
gi|445700760|gb|ELZ52751.1| type II secretion system protein E [Halorubrum distributum JCM
10118]
gi|445812600|gb|EMA62591.1| type II secretion system protein E [Halorubrum litoreum JCM 13561]
Length = 577
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ I++ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIIVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRSDDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVEIVSKTE 362
+S A E V T+
Sbjct: 453 DYSSAFEWVPDTD 465
>gi|448480604|ref|ZP_21604677.1| type II secretion system protein E [Halorubrum arcis JCM 13916]
gi|445822145|gb|EMA71919.1| type II secretion system protein E [Halorubrum arcis JCM 13916]
Length = 577
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ I++ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIIVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRSDDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVEIVSKTE 362
+S A E V T+
Sbjct: 453 DYSSAFEWVPDTD 465
>gi|392593614|gb|EIW82939.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 635
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 176 RAVSGSANLLQDLVQDGA--SLLFIGPPGVGKTTIIREIAR 214
R ++GS +LL +L ++G+ SL+F GPPG GKTT+ R +AR
Sbjct: 144 RHLTGSDSLLMNLAENGSLGSLIFWGPPGCGKTTLSRLLAR 184
>gi|256272659|gb|EEU07636.1| Yta7p [Saccharomyces cerevisiae JAY291]
Length = 1379
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|313679507|ref|YP_004057246.1| ATP-dependent proteinase [Oceanithermus profundus DSM 14977]
gi|313152222|gb|ADR36073.1| ATP-dependent proteinase [Oceanithermus profundus DSM 14977]
Length = 808
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
V G LLF+GPPGVGKT+I + IAR L Y
Sbjct: 353 VNKGPILLFVGPPGVGKTSIAKSIARALGRKY 384
>gi|334137167|ref|ZP_08510612.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
gi|333605365|gb|EGL16734.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
Length = 397
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 223 RVMIVDTSSEIGGN-GDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT 281
+V IVD SEI + +P +G R V ++ + + ++ + + P+V+++DEIG
Sbjct: 243 KVGIVDERSEIAASERGVPRFDLGP--RTDVLDACPKAEGMMMMIRSMSPEVLIVDEIGR 300
Query: 282 KLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL-EMLIGGV--QNVTLGDEEAHRRGV 338
+A A GI+++ATAHG + ++ P L E+L GV + V LG A R V
Sbjct: 301 HEDAEAIREALHAGIRIIATAHGRDLGDVKRRPVLRELLESGVFGRYVILGRSAAGGRLV 360
Query: 339 Q 339
Q
Sbjct: 361 Q 361
>gi|6321709|ref|NP_011786.1| Yta7p [Saccharomyces cerevisiae S288c]
gi|1729862|sp|P40340.2|TBP7_YEAST RecName: Full=Tat-binding homolog 7
gi|1323491|emb|CAA97300.1| YTA7 [Saccharomyces cerevisiae]
gi|1556439|emb|CAA69201.1| yta7 [Saccharomyces cerevisiae]
gi|190406728|gb|EDV09995.1| hypothetical protein SCRG_00757 [Saccharomyces cerevisiae RM11-1a]
gi|285812458|tpg|DAA08358.1| TPA: Yta7p [Saccharomyces cerevisiae S288c]
gi|392299524|gb|EIW10618.1| Yta7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1379
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|207344897|gb|EDZ71886.1| YGR270Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1378
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 449 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 497
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 498 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 539
>gi|1272680|emb|CAA56963.1| YTA7 [Saccharomyces cerevisiae]
Length = 1379
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|328950168|ref|YP_004367503.1| anti-sigma H sporulation factor LonB [Marinithermus hydrothermalis
DSM 14884]
gi|328450492|gb|AEB11393.1| anti-sigma H sporulation factor, LonB [Marinithermus hydrothermalis
DSM 14884]
Length = 824
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
+ RA G + ++ V G LLF+GPPGVGKT+I + IAR L Y
Sbjct: 354 LKADRAARG--EIPKEEVNRGPILLFVGPPGVGKTSIAKSIARALGRKY 400
>gi|167628405|ref|YP_001678904.1| stage iii sporulation protein aa [Heliobacterium modesticaldum
Ice1]
gi|167591145|gb|ABZ82893.1| stage iii sporulation protein aa [Heliobacterium modesticaldum
Ice1]
Length = 137
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 262 LIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
L+ + + PQV+ DEIG + + +A G+ L+ATAHG E L+ P LE ++
Sbjct: 35 LLRLLRSMGPQVLATDEIGREEDVLAIEEAVHSGVTLLATAHGRNREELLTRPGLERML 93
>gi|151943542|gb|EDN61853.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 1378
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|323308901|gb|EGA62134.1| Yta7p [Saccharomyces cerevisiae FostersO]
Length = 1378
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|349578470|dbj|GAA23636.1| K7_Yta7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1378
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|259146771|emb|CAY80028.1| Yta7p [Saccharomyces cerevisiae EC1118]
Length = 1379
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGA------DILSKWVGEAER----- 498
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 499 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 540
>gi|42523611|ref|NP_968991.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus HD100]
gi|81617154|sp|Q6ML73.1|LON1_BDEBA RecName: Full=Lon protease 1; AltName: Full=ATP-dependent protease
La 1
gi|39575817|emb|CAE79984.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus HD100]
Length = 793
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDY 220
Q G+ L+FIGPPGVGKT++ + IAR L Y
Sbjct: 345 QQGSILMFIGPPGVGKTSLGKSIARALGKKY 375
>gi|392565350|gb|EIW58527.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 353
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ NDY+K+++ ++ S + G
Sbjct: 70 LLFYGPPGTGKTSTILAVARRIYGNDYRKQILELNASDDRG 110
>gi|374321738|ref|YP_005074867.1| recombination factor protein RarA [Paenibacillus terrae HPL-003]
gi|357200747|gb|AET58644.1| recombination factor protein RarA [Paenibacillus terrae HPL-003]
Length = 441
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 180 GSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
G +LQD++++ +S++F GPPGVGKTT +A+++AN K + +D S+ G
Sbjct: 35 GPGKVLQDMIKNDQVSSMIFWGPPGVGKTT----LAKIIANQTKSK--FIDFSAVTSGIK 88
Query: 238 DI 239
DI
Sbjct: 89 DI 90
>gi|260822034|ref|XP_002606408.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
gi|229291749|gb|EEN62418.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
Length = 997
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L+ +Y + +GG D+ I RR
Sbjct: 568 GKILCFYGPPGVGKTSIARSIARALSREYFR--------FSVGGMTDVAE--IKGHRRTY 617
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M KV+ ++ + P V++ +D+IG + +S +
Sbjct: 618 V--GAMPGKVIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 659
>gi|448495753|ref|ZP_21610198.1| type II secretion system protein E [Halorubrum californiensis DSM
19288]
gi|445687846|gb|ELZ40121.1| type II secretion system protein E [Halorubrum californiensis DSM
19288]
Length = 569
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ IV+ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIVVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRADDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVEIVSKTE 362
++ A E V ++
Sbjct: 453 DYASAFEWVPDSD 465
>gi|339483576|ref|YP_004695362.1| flagellar biosynthetic protein FlhF [Nitrosomonas sp. Is79A3]
gi|338805721|gb|AEJ01963.1| flagellar biosynthetic protein FlhF [Nitrosomonas sp. Is79A3]
Length = 429
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------ 238
D+++ G IGP GVGKTT ++A V+ + K ++ S IGG+
Sbjct: 191 DMIEKGGVYALIGPTGVGKTTTTAKLAARCVIRHGADKVALLTTDSYRIGGHEQLRIYGQ 250
Query: 239 ---IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQ 293
IP I + +Q+ SE+ +H VLI+ V +V ++I T L T +
Sbjct: 251 LLGIPVRNIKDTDDLQLTLSELKNKHMVLIDTVGMSQRDQMVAEQI-TMLS--NCGTDVK 307
Query: 294 RGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGP 348
R + L A ++G T++ +I + G + +T DE A V V+ RK P
Sbjct: 308 RMLILSAASNGKTLDEVISAHQKSGIYGCI--ITKVDEAASLGVVLDVVIRRKLP 360
>gi|448432608|ref|ZP_21585664.1| type II secretion system protein E [Halorubrum tebenquichense DSM
14210]
gi|445686864|gb|ELZ39168.1| type II secretion system protein E [Halorubrum tebenquichense DSM
14210]
Length = 566
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ I++ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIIVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRSDDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVEIVSKTE 362
+S A E V ++
Sbjct: 453 DYSSAFEWVPDSD 465
>gi|421769431|ref|ZP_16206138.1| Late competence protein ComGA, access of DNA to ComEA
[Lactobacillus rhamnosus LRHMDP2]
gi|421772286|ref|ZP_16208942.1| Late competence protein ComGA, access of DNA to ComEA
[Lactobacillus rhamnosus LRHMDP3]
gi|411183854|gb|EKS50989.1| Late competence protein ComGA, access of DNA to ComEA
[Lactobacillus rhamnosus LRHMDP3]
gi|411184562|gb|EKS51694.1| Late competence protein ComGA, access of DNA to ComEA
[Lactobacillus rhamnosus LRHMDP2]
Length = 289
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLV--- 189
EH Q+G F + + + L ++ R R+ ++ L + A G+ LL L+
Sbjct: 66 EHRRVQLGAFYHPD-SNVFLRLSSVADFRGRESLVVRLISGIPDA-QGARQLLDRLMSIL 123
Query: 190 -QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
Q L GP G GKTT++ ++A LA K V+ ++ EI +
Sbjct: 124 TQRRGMLTLAGPTGSGKTTLLYQLATRLAAS--KMVLSIEDPVEINQPQFL--------- 172
Query: 249 RMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV + +EM + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 QLQVNSEAEMSYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|403728784|ref|ZP_10948251.1| putative ATPase [Gordonia rhizosphera NBRC 16068]
gi|403203296|dbj|GAB92582.1| putative ATPase [Gordonia rhizosphera NBRC 16068]
Length = 273
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 187 DLVQDGASLLFI-GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNG 237
DLV DGA LL + G PG GKT +A V+A D K V+++ + I GNG
Sbjct: 6 DLVADGAPLLLLHGDPGTGKTATAHSLAGVIATDLAKPVVLIILNERIRGNG 57
>gi|366994133|ref|XP_003676831.1| hypothetical protein NCAS_0E04050 [Naumovozyma castellii CBS 4309]
gi|342302698|emb|CCC70475.1| hypothetical protein NCAS_0E04050 [Naumovozyma castellii CBS 4309]
Length = 1329
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 434 VLFHGPPGTGKTLMARALAASCSSDTRKITFFMRKGA------DILSKWVGEAER----- 482
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 483 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 524
>gi|393240465|gb|EJD47991.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 348
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ NDYK++++ ++ S + G
Sbjct: 66 LLFYGPPGTGKTSTILAVARRIYGNDYKRQILELNASDDRG 106
>gi|194468353|ref|ZP_03074339.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
gi|194453206|gb|EDX42104.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
Length = 325
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 32/236 (13%)
Query: 80 LALLPEE--MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
L +LP + ++ ++ L+ +V D G+ RF S +D ++ EH
Sbjct: 19 LYILPHDRYYQLSLAIKETLFPFKQVTRDYGQ----RFISYLKYCADMAVS----EHRRP 70
Query: 138 QVGDFAVDN-RAGISRTLHRISAIRNRKGAIIGLT-----CRVGRAVSGSANLLQDLVQD 191
Q+G F I+ L + + R+ +I V ++LQ+ Q
Sbjct: 71 QLGAFKFTYAHQKINLRLSSVGDYQGRESLVIRFIYPLNDISFNFLVPHQWDILQEYRQQ 130
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
+LF GP G GKTT + ++AR L K+ V+ ++ EI HPG +Q
Sbjct: 131 RGLILFAGPMGAGKTTTMYQLARQLLP--KQVVLTIEDPVEID------HPGF-----IQ 177
Query: 252 VPNSE---MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
+ +E M ++ L++ H P V +I EI A + A G ++ T H
Sbjct: 178 LQINELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|448538003|ref|ZP_21622750.1| type II secretion system protein E [Halorubrum hochstenium ATCC
700873]
gi|445701511|gb|ELZ53489.1| type II secretion system protein E [Halorubrum hochstenium ATCC
700873]
Length = 566
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ I++ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIIVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRSDDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVEIVSKTE 362
+S A E V ++
Sbjct: 453 DYSSAFEWVPDSD 465
>gi|393234170|gb|EJD41735.1| hypothetical protein AURDEDRAFT_90024 [Auricularia delicata
TFB-10046 SS5]
Length = 767
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 117 SGDFSLSDCQITVHHIEHATSQVGDFAVDN--RAGISRTLHRISAIRNRKGAIIGLTCRV 174
SG+F + ++T + ++ V + R + +H A+R R + +V
Sbjct: 393 SGEFEMLHGRVTSDDVARVVARATGVPVQSLMRGEREKLVHMEDALRQRVVGQDHVVAQV 452
Query: 175 GRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTS 230
AV S LQ+ + AS LF+GP GVGKT + + +A L +D K+ ++ ++ +
Sbjct: 453 SDAVRISRAGLQNPSRPIASFLFMGPTGVGKTELTKALAEFLYDDEKRGLITINMT 508
>gi|367006550|ref|XP_003688006.1| hypothetical protein TPHA_0L02210 [Tetrapisispora phaffii CBS 4417]
gi|357526312|emb|CCE65572.1| hypothetical protein TPHA_0L02210 [Tetrapisispora phaffii CBS 4417]
Length = 1400
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + + DI +G A R
Sbjct: 470 VLFHGPPGTGKTLMARALAASCSSDTRKITFFMRKGA------DILSKWVGEAER----- 518
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 519 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 560
>gi|431468393|ref|ZP_19514422.1| competence protein ComGA [Enterococcus faecium E1630]
gi|431760968|ref|ZP_19549559.1| competence protein ComGA [Enterococcus faecium E3346]
gi|430584070|gb|ELB22421.1| competence protein ComGA [Enterococcus faecium E1630]
gi|430623247|gb|ELB59947.1| competence protein ComGA [Enterococcus faecium E3346]
Length = 309
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGALTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT++I LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLIYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|403415842|emb|CCM02542.1| predicted protein [Fibroporia radiculosa]
Length = 358
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ NDY+K+++ ++ S + G
Sbjct: 75 LLFYGPPGTGKTSTILAVARRIYGNDYRKQILELNASDDRG 115
>gi|293556285|ref|ZP_06674870.1| ComG operon protein 1 [Enterococcus faecium E1039]
gi|291601544|gb|EFF31811.1| ComG operon protein 1 [Enterococcus faecium E1039]
Length = 285
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 41 MDIGEKRKAQLGALTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 93
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT++I LA + K +V
Sbjct: 94 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLIYR----LALEEKLQV 138
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 139 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 189
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 190 TAHAAVRAALTGHRVFATVHARNLEGTLVR 219
>gi|444367330|ref|ZP_21167286.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
cenocepacia K56-2Valvano]
gi|443603064|gb|ELT71093.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
cenocepacia K56-2Valvano]
Length = 384
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 148 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 207
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I A+ QR
Sbjct: 208 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANAPVQR 264
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 265 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 319
Query: 348 P 348
P
Sbjct: 320 P 320
>gi|227544184|ref|ZP_03974233.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|338204136|ref|YP_004650281.1| competence protein [Lactobacillus reuteri SD2112]
gi|227185820|gb|EEI65891.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|336449376|gb|AEI57991.1| competence protein [Lactobacillus reuteri SD2112]
Length = 325
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 80 LALLPEE--MRIRVSEHPELYELIEVVMDLGRKPLARFPSGDFSLSDCQITVHHIEHATS 137
L +LP + ++ +S L+ +V D G+ RF S ++ ++ EH
Sbjct: 19 LYILPHDRYYQLSLSIKGTLFPFKQVTRDYGQ----RFISYLKYCANMAVS----EHRRP 70
Query: 138 QVGDFAVDN-RAGISRTLHRISAIRNRKGAIIGLT-----CRVGRAVSGSANLLQDLVQD 191
Q+G F I+ L + + R+ +I R V +LQ Q
Sbjct: 71 QLGAFKFTYAHQKINLRLSSVGDYQGRESLVIRFIYPLNDIRFNFLVPHQWEILQKYRQQ 130
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
+LF GP G GKTT + ++AR L K+ V+ ++ EI HPG ++Q
Sbjct: 131 RGLILFAGPMGAGKTTTMYQLARQLLP--KQIVLTIEDPVEID------HPGF---IQLQ 179
Query: 252 VPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
V + M ++ L++ H P V +I EI A + A G ++ T H
Sbjct: 180 VNELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|404329323|ref|ZP_10969771.1| recombination factor protein RarA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 449
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 176 RAVSGSANLLQDLVQ--DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
R + G +L+ L+ + ASL+F GPPGVGKTT+ R IAR K + ++ S+
Sbjct: 35 RQLLGEGKVLRTLIDQDEAASLIFWGPPGVGKTTLARIIAR------KTKAAFINFSAVT 88
Query: 234 GGNGDI 239
G DI
Sbjct: 89 SGIKDI 94
>gi|430834076|ref|ZP_19452086.1| competence protein ComGA [Enterococcus faecium E0679]
gi|430485976|gb|ELA62857.1| competence protein ComGA [Enterococcus faecium E0679]
Length = 309
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGALTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT++I LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLIYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|430746450|ref|YP_007205579.1| ATP-dependent protease La [Singulisphaera acidiphila DSM 18658]
gi|430018170|gb|AGA29884.1| ATP-dependent protease La [Singulisphaera acidiphila DSM 18658]
Length = 852
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
G LLFIGPPGVGKT+I + IAR L Y + +
Sbjct: 383 GPILLFIGPPGVGKTSIAKSIARALGRKYVRAAL 416
>gi|444364499|ref|ZP_21164816.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
cenocepacia BC7]
gi|443592854|gb|ELT61629.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
cenocepacia BC7]
Length = 373
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 137 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 196
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I A+ QR
Sbjct: 197 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANAPVQR 253
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 254 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 308
Query: 348 P 348
P
Sbjct: 309 P 309
>gi|148543788|ref|YP_001271158.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|184153194|ref|YP_001841535.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227363232|ref|ZP_03847364.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|325682160|ref|ZP_08161678.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
gi|148530822|gb|ABQ82821.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|183224538|dbj|BAG25055.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227071688|gb|EEI09979.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|324978804|gb|EGC15753.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
Length = 325
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 133 EHATSQVGDFAVDN-RAGISRTLHRISAIRNRKGAIIGLT-----CRVGRAVSGSANLLQ 186
EH Q+G F I+ L + + R+ +I R V +LQ
Sbjct: 66 EHRRPQLGAFKFTYAHQKINLRLSSVGDYQGRESLVIRFIYPLNDIRFNFLVPHQWEILQ 125
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
Q +LF GP G GKTT + ++AR L K+ V+ ++ EI HPG
Sbjct: 126 KYRQQRGLILFAGPMGAGKTTTMYQLARQLLP--KQIVLTIEDPVEID------HPGF-- 175
Query: 247 ARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV + M ++ L++ H P V +I EI A + A G ++ T H
Sbjct: 176 -IQLQVNELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|357636533|ref|ZP_09134408.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
gi|357584987|gb|EHJ52190.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
Length = 313
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 196 LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-PN 254
LF GP G GKTT++ +IAR + K+++ ++ EI N ++Q+ N
Sbjct: 136 LFSGPVGSGKTTLMYQIAR--EKFFNKQIITIEDPVEIKE---------ANMLQLQLNEN 184
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN----- 309
M + LI+ H P +++I EI + A A + G+ +++T H +I
Sbjct: 185 IGMTYDSLIKLSLRHRPDILIIGEIRDRETARAVIRASLTGVLVMSTVHAKSIPGVYARL 244
Query: 310 --LIMNPS-LEMLIGGV 323
L +NP LE +GG+
Sbjct: 245 LELGVNPKELENTLGGI 261
>gi|363752763|ref|XP_003646598.1| hypothetical protein Ecym_4769 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890233|gb|AET39781.1| hypothetical protein Ecym_4769 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1339
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A + D +K + + DI +G A R
Sbjct: 460 VLFHGPPGTGKTLMARALAVSCSTDKRKITFFMRKGA------DILSKWVGEAER----- 508
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 509 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 550
>gi|365983044|ref|XP_003668355.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
gi|343767122|emb|CCD23112.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
Length = 1348
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A ++D +K + DI +G A R
Sbjct: 452 VLFHGPPGTGKTLMARALAASCSSDSQKITFF------MRKGADILSKWVGEAER----- 500
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 501 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 542
>gi|254246772|ref|ZP_04940093.1| Flagellar GTP-binding protein [Burkholderia cenocepacia PC184]
gi|124871548|gb|EAY63264.1| Flagellar GTP-binding protein [Burkholderia cenocepacia PC184]
Length = 421
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 185 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 244
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I A+ QR
Sbjct: 245 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANAPVQR 301
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 302 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 356
Query: 348 PSTF 351
P +
Sbjct: 357 PVHY 360
>gi|391326181|ref|XP_003737599.1| PREDICTED: replication factor C subunit 4-like [Metaseiulus
occidentalis]
Length = 320
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 183 NLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVL-ANDYKKRVMIVDTSSEIGGNGDI 239
++L+ +Q G LLF GPPG GKT+ I +AR L N+++++V+ ++ S E G + +
Sbjct: 30 SVLKKCLQSGDLPHLLFFGPPGTGKTSTILALARDLYGNEFRQKVLELNASDERGIS--V 87
Query: 240 PHPGIGNARRMQVPNSEMQHKVLI 263
+ N +M +++++++I
Sbjct: 88 IREKVKNFSQMTANQGKIRYRIVI 111
>gi|402564987|ref|YP_006614332.1| flagellar biosynthesis regulator FlhF [Burkholderia cepacia GG4]
gi|402246184|gb|AFQ46638.1| flagellar biosynthesis regulator FlhF [Burkholderia cepacia GG4]
Length = 581
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 345 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 404
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + + D+IG A+ QR
Sbjct: 405 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRALSDQIGM---LHGANAPVQR 461
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 462 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 516
Query: 348 P 348
P
Sbjct: 517 P 517
>gi|170101098|ref|XP_001881766.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643121|gb|EDR07374.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 768
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLAND-----YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R++A + + KRV+ +D S+ + G+G R
Sbjct: 73 VLIGPPGVGKTAILEGLASRIVAKEVPESLHNKRVLSIDLSAIMAGSGI----------R 122
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
Q E + K L+ +E+ QVI IDE+ T + + G
Sbjct: 123 GQF---EEKFKALLRDIEDEGRQVICFIDEVHTLFN--------------LGKSEGSIDA 165
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK-TVLERK------GPSTFSCAVEIVS-- 359
++ P+L G+Q V + +R+ + K LER+ T S + I+
Sbjct: 166 GQMIKPALAR---GLQLVGATTPDEYRKTISKDAALERRFQPVTIDEPTVSSTISILRGL 222
Query: 360 KTELRVHHSLEATVDAILSGRI 381
K VHH +E + A+++ +
Sbjct: 223 KPRYEVHHGVEISDGALVTAAV 244
>gi|346471367|gb|AEO35528.1| hypothetical protein [Amblyomma maculatum]
Length = 358
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIG 234
D +LLF GPPG GKT+ I +AR L D YK R++ ++ S E G
Sbjct: 64 DLPNLLFYGPPGTGKTSTILALARELFGDMYKSRILELNASDERG 108
>gi|426404084|ref|YP_007023055.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860752|gb|AFY01788.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 770
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G+ L+FIGPPGVGKT++ + IAR L +Y
Sbjct: 324 GSILMFIGPPGVGKTSLGKSIARALGKNY 352
>gi|261749144|ref|YP_003256829.1| ATP-dependent Clp protease ATP-binding subunit [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497236|gb|ACX83686.1| ATP-dependent Clp protease, ATP-binding subunit [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
Length = 705
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 55/208 (26%)
Query: 196 LFIGPPGVGKTTII---------REIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
L IG PGVGK+ I R+++RVL Y KRV+++D +S + G
Sbjct: 101 LLIGEPGVGKSAIAEGLALRIVQRKVSRVL---YNKRVVVLDLASLVA----------GT 147
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
R Q E + K +I E + ++ IDEI T + A + G
Sbjct: 148 KYRGQF---EERMKAIINESEKNTDLILFIDEIHTMIGAGGTT--------------GSL 190
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKT-VLERK------GPSTFSCAVEIVS 359
+ I P+L G +Q + +R+ ++K LER+ PS+ +EI+
Sbjct: 191 DASNIFKPALAR--GEIQCIGATTLNEYRQYIEKDGALERRFQKIIVQPSSEEETIEILK 248
Query: 360 KTELRV--HHSLEATVDAI-----LSGR 380
K + R HH++ T DAI L+GR
Sbjct: 249 KIKGRYESHHNVIYTEDAIKACVHLTGR 276
>gi|408410041|ref|ZP_11181299.1| DNA repair protein radA [Lactobacillus sp. 66c]
gi|407875792|emb|CCK83105.1| DNA repair protein radA [Lactobacillus sp. 66c]
Length = 458
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---DTSSEIGGNGDIPHPGIGNAR 248
G+ +L G PG+GK+T++ +I LA YK V+ V +++S+I D G+G +
Sbjct: 93 GSLVLIGGDPGIGKSTLMLQIMSDLAEKYK--VLYVSGEESASQIKLRAD--RLGLGQSP 148
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLEAMAAST 290
M P S M+H + + +++ P +VID I T L++M S
Sbjct: 149 MMLYPESNMEH--IRDQIDDLKPDFVVIDSIQTMNEPSLDSMVGSA 192
>gi|427779307|gb|JAA55105.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 392
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIG 234
D +LLF GPPG GKT+ I +AR L D YK R++ ++ S E G
Sbjct: 98 DLPNLLFYGPPGTGKTSTILALARELFGDMYKSRILELNASDERG 142
>gi|320450068|ref|YP_004202164.1| ATP-dependent protease La [Thermus scotoductus SA-01]
gi|320150237|gb|ADW21615.1| ATP-dependent protease La [Thermus scotoductus SA-01]
Length = 818
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 360 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 393
>gi|347534159|ref|YP_004840829.1| DNA repair protein radA-like protein [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504215|gb|AEN98897.1| DNA repair protein radA-like protein [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 460
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---DTSSEIGGNGDIPHPGIGNAR 248
G+ +L G PG+GK+T++ +++ L++ Y KRV+ V +++ ++ D G+ +
Sbjct: 92 GSLVLIGGDPGIGKSTLLLQVSGQLSH-YGKRVLYVTGEESADQVKMRSD--RLGVKHLD 148
Query: 249 RMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
+ V P ++M + EA+ N P V++ID + T E AS + V+ GVT
Sbjct: 149 NLYVFPETDMT--AIREAIANVKPDVVIIDSVQTMQEGDVASAVGS-----VSQVRGVTA 201
Query: 308 ENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELRVHH 367
+ + + + + I V +VT G A GP T V+ V E HH
Sbjct: 202 DLMNIAKTNNITIFVVGHVTKGGAIA-------------GPKTLEHMVDTVLYFEGDKHH 248
Query: 368 S 368
+
Sbjct: 249 A 249
>gi|409349719|ref|ZP_11233089.1| DNA repair protein radA [Lactobacillus equicursoris CIP 110162]
gi|407877948|emb|CCK85147.1| DNA repair protein radA [Lactobacillus equicursoris CIP 110162]
Length = 458
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---DTSSEIGGNGDIPHPGIGNAR 248
G+ +L G PG+GK+T++ +I LA YK V+ V +++S+I D G+G +
Sbjct: 93 GSLVLIGGDPGIGKSTLMLQIMSDLAEKYK--VLYVSGEESASQIKLRAD--RLGLGQSP 148
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLEAMAAST 290
M P S M+H + + +++ P +VID I T L++M S
Sbjct: 149 MMLYPESNMEH--IRDQIDDLKPDFVVIDSIQTMNEPSLDSMVGSA 192
>gi|163846485|ref|YP_001634529.1| type II secretion system protein E [Chloroflexus aurantiacus
J-10-fl]
gi|222524266|ref|YP_002568737.1| type II secretion system protein E [Chloroflexus sp. Y-400-fl]
gi|163667774|gb|ABY34140.1| type II secretion system protein E [Chloroflexus aurantiacus
J-10-fl]
gi|222448145|gb|ACM52411.1| type II secretion system protein E [Chloroflexus sp. Y-400-fl]
Length = 401
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 181 SANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIP 240
+++LL + GASLL GP G GKTT+ + + + R+++++ E+
Sbjct: 181 ASDLLLAALNGGASLLIAGPTGSGKTTLAAALTQAIGR--HMRLVVIEDGGEL------- 231
Query: 241 HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
P N+ ++ P + P I++ E+ EAMA A G +
Sbjct: 232 -PRSANSLHIEAPPEPGGFGRAVTFALRQKPNYIIVGEV-RGGEAMAMLQAAATGHPGLG 289
Query: 301 TAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEA 333
T H T++ + N LIG Q T + A
Sbjct: 290 TIHAATVQGALRNLERMALIGLAQETTGAGQAA 322
>gi|431922343|gb|ELK19434.1| Lon protease like protein, mitochondrial [Pteropus alecto]
Length = 960
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMADVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGFQGDPSSAL 608
>gi|261209207|ref|ZP_05923599.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289566124|ref|ZP_06446559.1| type II secretion system protein E [Enterococcus faecium D344SRF]
gi|260076753|gb|EEW64488.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289162069|gb|EFD09934.1| type II secretion system protein E [Enterococcus faecium D344SRF]
Length = 317
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 73 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 125
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 126 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLVR 251
>gi|257882134|ref|ZP_05661787.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257885325|ref|ZP_05664978.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|424779533|ref|ZP_18206453.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|424795867|ref|ZP_18221673.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|424938655|ref|ZP_18354429.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|424952956|ref|ZP_18367947.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|424956126|ref|ZP_18370921.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|424966632|ref|ZP_18380396.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|424993962|ref|ZP_18405929.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|424996613|ref|ZP_18408411.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|425000724|ref|ZP_18412274.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|425003518|ref|ZP_18414882.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|425010086|ref|ZP_18421058.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|425017476|ref|ZP_18427979.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|425031905|ref|ZP_18437000.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|425037662|ref|ZP_18442313.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
gi|257817792|gb|EEV45120.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257821181|gb|EEV48311.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|402923884|gb|EJX44134.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|402925099|gb|EJX45270.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|402936577|gb|EJX55747.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|402940163|gb|EJX59019.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|402946686|gb|EJX64943.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|402956187|gb|EJX73661.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|402981301|gb|EJX96840.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|402988200|gb|EJY03218.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|402988580|gb|EJY03577.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|402991827|gb|EJY06575.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|403001114|gb|EJY15186.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|403004261|gb|EJY18080.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|403014441|gb|EJY27444.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|403021445|gb|EJY33903.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
Length = 317
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 73 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 125
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 126 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLVR 251
>gi|332025898|gb|EGI66054.1| ATPase WRNIP1 [Acromyrmex echinatior]
Length = 552
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 176 RAVSGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
R + G +L +L+Q G +++ GPPG GKT++ IA + ND +++ V S+ +
Sbjct: 121 RHILGPRTILSELLQKGEIPNMILWGPPGCGKTSLANVIAHMCKNDASRKLRYVKLSAAM 180
Query: 234 GG 235
G
Sbjct: 181 AG 182
>gi|169849253|ref|XP_001831330.1| DNA replication factor [Coprinopsis cinerea okayama7#130]
gi|116507598|gb|EAU90493.1| DNA replication factor [Coprinopsis cinerea okayama7#130]
Length = 347
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ +DYKK+++ ++ S + G
Sbjct: 64 LLFYGPPGTGKTSTILAVARRIYGSDYKKQILELNASDDRG 104
>gi|384431296|ref|YP_005640656.1| anti-sigma H sporulation factor LonB [Thermus thermophilus
SG0.5JP17-16]
gi|333966764|gb|AEG33529.1| anti-sigma H sporulation factor, LonB [Thermus thermophilus
SG0.5JP17-16]
Length = 805
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|430820741|ref|ZP_19439364.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430826539|ref|ZP_19444719.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430829137|ref|ZP_19447235.1| competence protein ComGA [Enterococcus faecium E0269]
gi|431218506|ref|ZP_19501316.1| competence protein ComGA [Enterococcus faecium E1620]
gi|431765560|ref|ZP_19554070.1| competence protein ComGA [Enterococcus faecium E4215]
gi|430439287|gb|ELA49653.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430444947|gb|ELA54744.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430481556|gb|ELA58710.1| competence protein ComGA [Enterococcus faecium E0269]
gi|430569575|gb|ELB08566.1| competence protein ComGA [Enterococcus faecium E1620]
gi|430628034|gb|ELB64491.1| competence protein ComGA [Enterococcus faecium E4215]
Length = 309
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|421477564|ref|ZP_15925381.1| flagellar biosynthesis protein FlhF, partial [Burkholderia
multivorans CF2]
gi|400226315|gb|EJO56399.1| flagellar biosynthesis protein FlhF, partial [Burkholderia
multivorans CF2]
Length = 438
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 197 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 256
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I AST QR
Sbjct: 257 LGVPVHAVKDAGDLSLALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGASTPVQR 313
Query: 295 GIQLVATAHGVTIENLIM------------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTV 342
+ L AT+HG T+ ++ P L I +T DE H G TV
Sbjct: 314 LLLLNATSHGDTLNEVVQAYRSAGDRADLAGPDLAGCI-----LTKLDEATHLGGALDTV 368
Query: 343 LERKGPSTF 351
+ K P +
Sbjct: 369 IRYKLPVHY 377
>gi|386360390|ref|YP_006058635.1| ATP-dependent protease La [Thermus thermophilus JL-18]
gi|383509417|gb|AFH38849.1| ATP-dependent protease La [Thermus thermophilus JL-18]
Length = 805
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|167571640|ref|ZP_02364514.1| flagellar biosynthesis regulator FlhF [Burkholderia oklahomensis
C6786]
Length = 383
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 142 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 201
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + +V D+I A T QR
Sbjct: 202 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRMVSDQIAM---LYGADTPVQR 258
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 259 LLLLNATSHGDTLNEVVQAYRSAAGQPEAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 316
Query: 346 KGPSTF 351
K P +
Sbjct: 317 KLPVHY 322
>gi|46199052|ref|YP_004719.1| ATP-dependent protease La [Thermus thermophilus HB27]
gi|81405922|sp|Q72JM6.1|LON2_THET2 RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|46196676|gb|AAS81092.1| ATP-dependent protease La [Thermus thermophilus HB27]
Length = 804
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|55981080|ref|YP_144377.1| alternative ATP-dependent protease La [Thermus thermophilus HB8]
gi|55772493|dbj|BAD70934.1| alternative ATP-dependent protease La (Lon protease) [Thermus
thermophilus HB8]
Length = 804
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|392589426|gb|EIW78756.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 813
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLAND-----YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R++A + + KRV+ +D S+ + G+G R
Sbjct: 128 VLIGPPGVGKTAILEGLASRIVAKEVPESLHNKRVLSIDLSAIMAGSGI----------R 177
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
Q E + K LI +E+ VI IDEI T + G
Sbjct: 178 GQF---EEKFKALIRDIEDEAGNVICFIDEIHTLFN--------------LGKTEGSIDA 220
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK-TVLERK------GPSTFSCAVEIVS-- 359
++ P+L G+Q V E +R+ + K LER+ T + I+
Sbjct: 221 GQMIKPALAR---GLQLVGATTVEEYRKTIGKDAALERRFQPVQIDEPTVESTISILRGL 277
Query: 360 KTELRVHHSLEATVDAILSGRI 381
K VHH +E + +A+++ +
Sbjct: 278 KPRYEVHHGVEISDNALVTAAV 299
>gi|381190671|ref|ZP_09898189.1| ATP-dependent protease La [Thermus sp. RL]
gi|380451554|gb|EIA39160.1| ATP-dependent protease La [Thermus sp. RL]
Length = 805
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|302671435|ref|YP_003831395.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Butyrivibrio
proteoclasticus B316]
gi|302395908|gb|ADL34813.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Butyrivibrio
proteoclasticus B316]
Length = 741
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 145 DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANLLQDLVQDG---ASLLFIGPP 201
D+ AG+ RI K I G V + V+ L++DG ASLLF+GP
Sbjct: 437 DDAAGLETLEERI------KTRIFGQDEAVSQVVNAVKFSKAGLIEDGKPLASLLFVGPT 490
Query: 202 GVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK- 260
GVGKT EIAR LA++ +++ D SE G + A+ + P + ++
Sbjct: 491 GVGKT----EIARTLADELGVKLIRFDM-SEYGEKHAV-------AKLIGSPAGYVGYEE 538
Query: 261 --VLIEAVENHMPQVIVIDEI 279
+L EA+ + V+++DEI
Sbjct: 539 GGILTEAIRKNPSCVLLLDEI 559
>gi|293566166|ref|ZP_06678569.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|294618791|ref|ZP_06698318.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|294622213|ref|ZP_06701273.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|406579509|ref|ZP_11054739.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|406581779|ref|ZP_11056915.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|406583818|ref|ZP_11058857.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|406591427|ref|ZP_11065709.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410936672|ref|ZP_11368536.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|416130740|ref|ZP_11597526.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|427395781|ref|ZP_18888703.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430823642|ref|ZP_19442211.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430836634|ref|ZP_19454611.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430839668|ref|ZP_19457606.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430845219|ref|ZP_19463115.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430853883|ref|ZP_19471609.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430859544|ref|ZP_19477155.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430860936|ref|ZP_19478531.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430866723|ref|ZP_19481949.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430960557|ref|ZP_19487093.1| competence protein ComGA [Enterococcus faecium E1576]
gi|431012419|ref|ZP_19490210.1| competence protein ComGA [Enterococcus faecium E1578]
gi|431260202|ref|ZP_19505708.1| competence protein ComGA [Enterococcus faecium E1623]
gi|431305110|ref|ZP_19508477.1| competence protein ComGA [Enterococcus faecium E1626]
gi|431381371|ref|ZP_19510973.1| competence protein ComGA [Enterococcus faecium E1627]
gi|431520338|ref|ZP_19516621.1| competence protein ComGA [Enterococcus faecium E1634]
gi|431702966|ref|ZP_19525089.1| competence protein ComGA [Enterococcus faecium E1904]
gi|431744412|ref|ZP_19533280.1| competence protein ComGA [Enterococcus faecium E2071]
gi|431745100|ref|ZP_19533954.1| competence protein ComGA [Enterococcus faecium E2134]
gi|431777504|ref|ZP_19565758.1| competence protein ComGA [Enterococcus faecium E2560]
gi|431783770|ref|ZP_19571861.1| competence protein ComGA [Enterococcus faecium E6012]
gi|431786280|ref|ZP_19574294.1| competence protein ComGA [Enterococcus faecium E6045]
gi|291590092|gb|EFF21884.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|291594979|gb|EFF26329.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|291598255|gb|EFF29348.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|364093909|gb|EHM36139.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|404455237|gb|EKA02096.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|404459244|gb|EKA05614.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|404464966|gb|EKA10475.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|404467742|gb|EKA12808.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410735088|gb|EKQ77005.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|425723770|gb|EKU86657.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430441675|gb|ELA51746.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430487957|gb|ELA64650.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430490404|gb|ELA66929.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430496053|gb|ELA72173.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430540132|gb|ELA80350.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430543511|gb|ELA83573.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430550773|gb|ELA90543.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430551254|gb|ELA91023.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430556066|gb|ELA95582.1| competence protein ComGA [Enterococcus faecium E1576]
gi|430559930|gb|ELA99254.1| competence protein ComGA [Enterococcus faecium E1578]
gi|430576941|gb|ELB15566.1| competence protein ComGA [Enterococcus faecium E1623]
gi|430579317|gb|ELB17826.1| competence protein ComGA [Enterococcus faecium E1626]
gi|430581733|gb|ELB20171.1| competence protein ComGA [Enterococcus faecium E1627]
gi|430585218|gb|ELB23513.1| competence protein ComGA [Enterococcus faecium E1634]
gi|430597049|gb|ELB34860.1| competence protein ComGA [Enterococcus faecium E1904]
gi|430605155|gb|ELB42560.1| competence protein ComGA [Enterococcus faecium E2071]
gi|430611154|gb|ELB48264.1| competence protein ComGA [Enterococcus faecium E2134]
gi|430639616|gb|ELB75489.1| competence protein ComGA [Enterococcus faecium E2560]
gi|430644515|gb|ELB80125.1| competence protein ComGA [Enterococcus faecium E6012]
gi|430645765|gb|ELB81268.1| competence protein ComGA [Enterococcus faecium E6045]
Length = 309
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|338708620|ref|YP_004662821.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295424|gb|AEI38531.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 864
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV S LQD + S LF+GP GVGKT + + +A L +D R M+ SE
Sbjct: 581 VSRAVRRSRAGLQDPNRPMGSFLFLGPTGVGKTELTKALASFLFDD--DRAMVRIDMSEF 638
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+ AR + P + ++ VL EAV QVI+ DE+
Sbjct: 639 MEKHAV-------ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 680
>gi|374850090|dbj|BAL53088.1| ATP-dependent protease La [uncultured Thermus/Deinococcus group
bacterium]
Length = 804
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
D V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 350 DEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|161523357|ref|YP_001578369.1| flagellar biosynthesis regulator FlhF [Burkholderia multivorans
ATCC 17616]
gi|189351870|ref|YP_001947498.1| flagellar biosynthesis regulator FlhF [Burkholderia multivorans
ATCC 17616]
gi|160340786|gb|ABX13872.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia multivorans ATCC 17616]
gi|189335892|dbj|BAG44962.1| flagellar biosynthesis protein [Burkholderia multivorans ATCC
17616]
Length = 583
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 342 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 401
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I AST QR
Sbjct: 402 LGVPVHAVKDAGDLSLALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGASTPVQR 458
Query: 295 GIQLVATAHGVTIENLIM------------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTV 342
+ L AT+HG T+ ++ P L I +T DE H G TV
Sbjct: 459 LLLLNATSHGDTLNEVVQAYRSAGDRADLAGPDLAGCI-----LTKLDEATHLGGALDTV 513
Query: 343 LERKGP 348
+ K P
Sbjct: 514 IRYKLP 519
>gi|294614176|ref|ZP_06694096.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430850302|ref|ZP_19468064.1| competence protein ComGA [Enterococcus faecium E1185]
gi|291592952|gb|EFF24541.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430535640|gb|ELA76039.1| competence protein ComGA [Enterococcus faecium E1185]
Length = 309
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|328779626|ref|XP_393943.4| PREDICTED: ATPase WRNIP1-like [Apis mellifera]
Length = 426
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 178 VSGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
V GS +LQ L+ G S++F GPPG GKT++ I+++ + ++V I++ S+ G
Sbjct: 15 VVGSNTILQQLLTKGHIPSMIFWGPPGCGKTSLTNIISKISKEMHGEKVNIINLSATSSG 74
Query: 236 NGDI 239
+I
Sbjct: 75 VSNI 78
>gi|193216872|ref|YP_002000114.1| heat shock ATP-dependent protease [Mycoplasma arthritidis 158L3-1]
gi|302425064|sp|B3PN08.1|LON_MYCA5 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|193002195|gb|ACF07410.1| heat shock ATP-dependent protease [Mycoplasma arthritidis 158L3-1]
Length = 835
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 178 VSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK-RVMIVDTSSEIGGN 236
V+ + N L+D V + L IGPPG GKTT+ + IA L + K + V SEI G+
Sbjct: 391 VNKTGNFLKDRVNNIPILTLIGPPGTGKTTLAKSIAEALGRQFVKISLGGVKDESEIRGH 450
Query: 237 -----GDIPHPGIGNARRMQVPN 254
G +P I ++ V N
Sbjct: 451 RRTYVGALPGKIISGIKKAGVSN 473
>gi|125977992|ref|XP_001353029.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|195172285|ref|XP_002026929.1| GL12737 [Drosophila persimilis]
gi|54641780|gb|EAL30530.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|194112697|gb|EDW34740.1| GL12737 [Drosophila persimilis]
Length = 331
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V + +HK++I
Sbjct: 106 QKVTLPKGRHKIVI 119
>gi|421868644|ref|ZP_16300290.1| Flagellar biosynthesis protein FlhF [Burkholderia cenocepacia H111]
gi|358071427|emb|CCE51168.1| Flagellar biosynthesis protein FlhF [Burkholderia cenocepacia H111]
Length = 594
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 358 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 417
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I A+ QR
Sbjct: 418 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANAPVQR 474
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 475 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 529
Query: 348 P 348
P
Sbjct: 530 P 530
>gi|312866240|ref|ZP_07726459.1| putative ComG operon protein 1 [Streptococcus downei F0415]
gi|311098213|gb|EFQ56438.1| putative ComG operon protein 1 [Streptococcus downei F0415]
Length = 315
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
M++G K A+ + D++ +D + + S VGD+ + R+
Sbjct: 66 MNVGEKRRAQLGACDYAFADGERAALRL----STVGDY------------------QGRE 103
Query: 165 GAIIGLTCRVGRAVS----GSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
+I L RA++ G LL ++ G LF GP G GKTT++ E+ D
Sbjct: 104 SLVIRLLFDRRRALNFWFDGLNALLPKIISRGL-YLFSGPVGSGKTTLMYELVSRRYPD- 161
Query: 221 KKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV---PNSEMQHKVLIEAVENHMPQVIVID 277
+++ ++ EI + +Q+ P+ EM + LI+ H P +++I
Sbjct: 162 -SQIITIEDPVEIK-----------QEKMLQLQLNPSIEMTYDNLIKLSLRHRPDILIIG 209
Query: 278 EIGTKLEAMAASTIAQRGIQLVATAHGVTI 307
EI K A A + GI++ +T H +I
Sbjct: 210 EIRDKETAQAVIRASLTGIRVFSTVHAKSI 239
>gi|418007630|ref|ZP_12647509.1| ComGA family late competence protein [Lactobacillus casei UW4]
gi|410548545|gb|EKQ22742.1| ComGA family late competence protein [Lactobacillus casei UW4]
Length = 288
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI I
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFI------ 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|300811959|ref|ZP_07092419.1| DNA repair protein RadA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497076|gb|EFK32138.1| DNA repair protein RadA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 458
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 175 GRAVSGSANL---LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---D 228
GR ++ S+ L L + G+ +L G PG+GK+T++ +I LA YK V+ V +
Sbjct: 73 GRVLTKSSELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSELAEKYK--VLYVSGEE 130
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLE 284
++S+I D G+G + + P S M+H + + +++ P +VID I T L+
Sbjct: 131 SASQIKLRAD--RLGLGQSPMLLYPESNMEH--IRDQIDDVKPDFVVIDSIQTMNEPSLD 186
Query: 285 AMAAS 289
+M S
Sbjct: 187 SMVGS 191
>gi|297622705|ref|YP_003704139.1| ATP-dependent protease La [Truepera radiovictrix DSM 17093]
gi|297163885|gb|ADI13596.1| ATP-dependent protease La [Truepera radiovictrix DSM 17093]
Length = 817
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
+ RA G L Q V G LLF GPPGVGKT+I + IA+ L +Y
Sbjct: 344 LKADRAARG--ELDQAEVNRGPILLFAGPPGVGKTSIAKSIAKALGREY 390
>gi|448501073|ref|ZP_21612082.1| type II secretion system protein E [Halorubrum coriense DSM 10284]
gi|445695814|gb|ELZ47914.1| type II secretion system protein E [Halorubrum coriense DSM 10284]
Length = 580
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 28/187 (14%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
++ SL+F G GKTT + ++ + + +V+ ++ + E+ D + R
Sbjct: 282 IEHNKSLIFAGGTASGKTTSMNAVSMFVPP--RAKVLTIEDTRELSLYHDNWLSAVTRER 339
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
R + + +M L+ + H P+ IV+ E+ + EA+ G +T H +IE
Sbjct: 340 RYEGTDIDMYD--LLRSALRHRPEYIVVGEVRGE-EAITLFQAMNTGHTTFSTMHADSIE 396
Query: 309 NLI-------------MNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLE------RKGPS 349
+I M SL+ML VQ +T D+E RR KT+ E R G
Sbjct: 397 TVINRLENEPINVPRAMVQSLDML--SVQTLTRADDERVRRA--KTIGEIGGIDQRTGEL 452
Query: 350 TFSCAVE 356
+S A E
Sbjct: 453 DYSSAFE 459
>gi|242011026|ref|XP_002426258.1| predicted protein [Pediculus humanus corporis]
gi|212510321|gb|EEB13520.1| predicted protein [Pediculus humanus corporis]
Length = 901
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 470 GKILCFFGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 519
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M KV+ ++ + P +++ +D+IG + +S + +
Sbjct: 520 V--GAMPGKVIQCLKKTKTENPLILIDEVDKIGKGYQGDPSSALLE 563
>gi|219848638|ref|YP_002463071.1| type II secretion system protein E [Chloroflexus aggregans DSM
9485]
gi|219542897|gb|ACL24635.1| type II secretion system protein E [Chloroflexus aggregans DSM
9485]
Length = 401
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 181 SANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIP 240
+ LL + GAS+L GP G GKTT+ + + + + R+++++ G++P
Sbjct: 181 AGELLLAALNGGASVLIAGPTGSGKTTLAAALTQAIGT--RMRLVVIED------GGELP 232
Query: 241 HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVA 300
H N+ ++ P + P I++ E+ EAMA A G +
Sbjct: 233 HS--ANSLHIEAPAETGGFSRAVTFALRQKPNYIIVGEV-RGGEAMAMLQAAATGHPGLG 289
Query: 301 TAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEA 333
T H T++ + N LIG T + A
Sbjct: 290 TIHAATVQGALRNLERMALIGLAHETTGAGQAA 322
>gi|341583855|ref|YP_004764346.1| ATP-dependent protease La [Rickettsia heilongjiangensis 054]
gi|340808081|gb|AEK74669.1| ATP-dependent protease La [Rickettsia heilongjiangensis 054]
Length = 778
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVM-IVDTSSEIGGN-----GDIPHPGIG 245
G L IGPPGVGKT++++ IA + Y K + V +EI G+ G +P +G
Sbjct: 349 GPILCLIGPPGVGKTSLVKSIAEGMGRKYTKLALGGVRDEAEIRGHRKTYLGSMPGKILG 408
Query: 246 NARRMQVPNSEM 257
+++Q N M
Sbjct: 409 QLKKVQTSNPVM 420
>gi|302306714|ref|NP_983086.2| ABR139Wp [Ashbya gossypii ATCC 10895]
gi|299788650|gb|AAS50910.2| ABR139Wp [Ashbya gossypii ATCC 10895]
Length = 1326
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A + + +K + + DI +G A R
Sbjct: 407 VLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKGA------DILSKWVGEAER----- 455
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 456 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 497
>gi|358449790|ref|ZP_09160270.1| type II secretion system protein E [Marinobacter manganoxydans
MnI7-9]
gi|357226015|gb|EHJ04500.1| type II secretion system protein E [Marinobacter manganoxydans
MnI7-9]
Length = 760
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVS----GSANLL----QDLV 189
Q+GD A D R +LH + A+I L + GRA++ G ++++ Q L+
Sbjct: 441 QLGDMAYDLRIQTQPSLHG-------ENAVIRLLPQTGRAMTIAELGMSSMIGARYQRLL 493
Query: 190 QDGASL-LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+ A L L +GP G GK+T + + LA+D +++V+ V+ E I N +
Sbjct: 494 DNPAGLVLVVGPTGSGKSTTLYAGLQTLADDGRRKVITVEDPIEY---------SIDNIQ 544
Query: 249 RMQVPNSEMQHKV--LIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
+ +V SE+ + A P VI++ EI + A+ A +Q G +++T H
Sbjct: 545 QTRV-RSEIGFGFADAMRAFVREDPDVILVGEIRDQETALEAIRASQTGHVVLSTLH 600
>gi|313124355|ref|YP_004034614.1| DNA repair protein rada [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280918|gb|ADQ61637.1| DNA repair protein radA [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 458
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 175 GRAVSGSANL---LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---D 228
GR ++ S+ L L + G+ +L G PG+GK+T++ +I LA YK V+ V +
Sbjct: 73 GRVLTKSSELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSELAEKYK--VLYVSGEE 130
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLE 284
++S+I D G+G + + P S M+H + + +++ P +VID I T L+
Sbjct: 131 SASQIKLRAD--RLGLGQSPMLLYPESNMEH--IRDQIDDVKPDFVVIDSIQTMNEPSLD 186
Query: 285 AMAAS 289
+M S
Sbjct: 187 SMVGS 191
>gi|325104459|ref|YP_004274113.1| ABC transporter [Pedobacter saltans DSM 12145]
gi|324973307|gb|ADY52291.1| ABC transporter related protein [Pedobacter saltans DSM 12145]
Length = 301
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 257 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIA-------QRGIQLVATAHGV-TIE 308
MQ KV A H P++I++DE + + + A I ++G ++ + H + T+E
Sbjct: 134 MQQKVQFVATVMHEPELIILDEPFSGFDPLNADIIKKEILELNKQGATIIFSTHRMETVE 193
Query: 309 NL-----IMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERK----GPSTFSCAVEIVS 359
L ++N S ++L G V+++ + ++R G K LE P+TFS + ++
Sbjct: 194 ELCDHIALINKSKKILDGSVRDI----KNSYRNGTFKIQLEGDFGDLNPNTFSVIQKTLT 249
Query: 360 K---TELRVHHSLEATVDAILSGRIPNVEIRRM 389
TEL +H V+ +L+ IP V I +
Sbjct: 250 ADDFTELTIHLHEGYKVNDVLNELIPRVNIHYL 282
>gi|358343770|ref|XP_003635970.1| ATP-dependent protease La, partial [Medicago truncatula]
gi|355501905|gb|AES83108.1| ATP-dependent protease La, partial [Medicago truncatula]
Length = 1955
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G LLF+GPPGVGKT+I + IAR L Y
Sbjct: 395 GPILLFVGPPGVGKTSIAKSIARALGRKY 423
>gi|374106289|gb|AEY95199.1| FABR139Wp [Ashbya gossypii FDAG1]
Length = 1326
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
+LF GPPG GKT + R +A + + +K + + DI +G A R
Sbjct: 407 VLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKGA------DILSKWVGEAER----- 455
Query: 255 SEMQHKVLIEAVENHMPQVIVIDEI-------GTKLEAMAASTIA 292
Q ++L E + H P +I DEI +K E + AS ++
Sbjct: 456 ---QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVS 497
>gi|317471830|ref|ZP_07931165.1| stage III sporulation protein AA, partial [Anaerostipes sp.
3_2_56FAA]
gi|316900603|gb|EFV22582.1| stage III sporulation protein AA [Anaerostipes sp. 3_2_56FAA]
Length = 233
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 170 LTCRVGRAVSGSA-NLLQDLVQDGASL--LFIGPPGVGKTTIIREIARVLANDYKKRVMI 226
L RV V G A + + +DG L L I PPG GKTT++R++ R+ A+D + V +
Sbjct: 126 LNIRVAHEVIGCAEGIFEHCTKDGQLLPVLIISPPGRGKTTLLRDMIRI-ASDGGETVGV 184
Query: 227 VDTSSEIGGN 236
VD SEI +
Sbjct: 185 VDERSEIAAS 194
>gi|167564490|ref|ZP_02357406.1| flagellar biosynthesis regulator FlhF [Burkholderia oklahomensis
EO147]
Length = 389
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 148 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 207
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + +V D+I A T QR
Sbjct: 208 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRMVSDQIAM---LHGADTPVQR 264
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 265 LLLLNATSHGDTLNEVVQAYRSAAGQPEAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 322
Query: 346 KGPSTF 351
K P +
Sbjct: 323 KLPVHY 328
>gi|170731606|ref|YP_001763553.1| flagellar biosynthesis regulator FlhF [Burkholderia cenocepacia
MC0-3]
gi|169814848|gb|ACA89431.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia cenocepacia MC0-3]
Length = 582
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 346 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 405
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAM--AASTIA 292
+P + +A + + SE+++K VLI+ + V D+I AM A+
Sbjct: 406 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQI-----AMLHGANAPV 460
Query: 293 QRGIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
QR + L AT+HG T+ ++ +P L I +T DE H GV TV+
Sbjct: 461 QRLLLLNATSHGDTLNEVVQAYRSAGDHPDLAGCI-----LTKLDEATHLGGVLDTVIRY 515
Query: 346 KGP 348
K P
Sbjct: 516 KLP 518
>gi|349688168|ref|ZP_08899310.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 867
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A+ ++ V RA +G LQD + S LF+GP GVGKT + + +AR L +D +K ++
Sbjct: 580 ALKAVSNAVRRARAG----LQDPNRPIGSFLFLGPTGVGKTELCKALARFLFDD-EKALL 634
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
VD S + + AR + P + ++ VL EAV QVI+ DE+
Sbjct: 635 RVDMSEFMEKH--------AVARLVGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 683
>gi|281348020|gb|EFB23604.1| hypothetical protein PANDA_017625 [Ailuropoda melanoleuca]
Length = 885
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L+ +Y + +GG D+ I RR
Sbjct: 442 GKILCFYGPPGVGKTSIARSIARALSREYFR--------FSVGGMTDVAE--IKGHRRTY 491
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P +++ +D+IG + +S + +
Sbjct: 492 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLE 535
>gi|291296624|ref|YP_003508022.1| ATP-dependent protease La [Meiothermus ruber DSM 1279]
gi|290471583|gb|ADD29002.1| ATP-dependent protease La [Meiothermus ruber DSM 1279]
Length = 815
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKK 222
V G LLF+GPPGVGKT+I + IA+ L Y +
Sbjct: 361 VSKGPILLFVGPPGVGKTSIAKSIAKSLGRKYHR 394
>gi|301784761|ref|XP_002927796.1| PREDICTED: lon protease homolog, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 910
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L+ +Y + +GG D+ I RR
Sbjct: 467 GKILCFYGPPGVGKTSIARSIARALSREYFR--------FSVGGMTDVAE--IKGHRRTY 516
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 517 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 558
>gi|442755967|gb|JAA70143.1| Putative atp-dependent lon protease [Ixodes ricinus]
Length = 798
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 588 GKMLCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 637
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 638 V--GAMPGKLIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 679
>gi|426196606|gb|EKV46534.1| hypothetical protein AGABI2DRAFT_71819 [Agaricus bisporus var.
bisporus H97]
Length = 344
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ N YKK+++ ++ S + G
Sbjct: 62 LLFYGPPGTGKTSTILAVARRIYGNSYKKQILELNASDDRG 102
>gi|312113927|ref|YP_004011523.1| heme exporter protein CcmA [Rhodomicrobium vannielii ATCC 17100]
gi|311219056|gb|ADP70424.1| heme exporter protein CcmA [Rhodomicrobium vannielii ATCC 17100]
Length = 211
Score = 42.7 bits (99), Expect = 0.70, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A++GL C+ G + A L V+ G +L+ GP G GKTT++R IA L + RV
Sbjct: 7 AVVGLACQRGGRIVVPA--LSFKVEAGCALILRGPNGAGKTTLLRTIAGYLPAE-SGRVA 63
Query: 226 IVDTSSEIGGNGDIPHPGIGNA 247
+ D E G G + G N
Sbjct: 64 VSDDKGEGTGEGQFHYIGHTNG 85
>gi|170701721|ref|ZP_02892660.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia ambifaria IOP40-10]
gi|170133384|gb|EDT01773.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia ambifaria IOP40-10]
Length = 374
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 138 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 197
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A +++ SE+++K VLI+ + + D+I A+ QR
Sbjct: 198 LGVPVHAVKDAGDLELALSELRNKHIVLIDTIGMSQRDRALSDQIAM---LHGANAPVQR 254
Query: 295 GIQLVATAHGVTIENLIMN-------PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ P L I +T DE H GV TV+ K
Sbjct: 255 LLLLNATSHGDTLNEVVQAYRSAAEYPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 309
Query: 348 P 348
P
Sbjct: 310 P 310
>gi|34557255|ref|NP_907070.1| cell division cycle protein 48-related protein [Wolinella
succinogenes DSM 1740]
gi|34482971|emb|CAE09970.1| CELL DIVISION CYCLE PROTEIN 48-RELATED PROTEIN [Wolinella
succinogenes]
Length = 319
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 28/150 (18%)
Query: 190 QDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
Q G +L GPPG GK+ R IA E G + GI
Sbjct: 62 QAGGGILLYGPPGCGKSYFARAIA-----------------GECGAT--FFNVGIDQILD 102
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEI---GTKLEAMAASTIAQRGIQLVATAHGVT 306
M V NSE K L ++ N P ++ +DEI G + + + + + +A GV
Sbjct: 103 MYVGNSEKNLKHLFQSARNVKPAILFVDEIDALGRRRDLLRHTNMTSTINAFLAELDGVE 162
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRR 336
+N ++LI G N + A RR
Sbjct: 163 SDN------SDLLIIGATNAPWDVDSAFRR 186
>gi|339021675|ref|ZP_08645681.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
gi|338751322|dbj|GAA08985.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
Length = 868
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A+ ++ V RA +G LQD + S LF+GP GVGKT + + +AR L +D +K ++
Sbjct: 579 ALKAVSNAVRRARAG----LQDPNRPIGSFLFLGPTGVGKTELTKALARFLFDD-EKALL 633
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
VD S + + AR + P + ++ VL EAV QVI+ DE+
Sbjct: 634 RVDMSEFMEKH--------AVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 682
>gi|423335885|ref|ZP_17313636.1| competence protein [Lactobacillus reuteri ATCC 53608]
gi|337729088|emb|CCC04211.1| competence protein [Lactobacillus reuteri ATCC 53608]
Length = 323
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 18/179 (10%)
Query: 133 EHATSQVGDFAVDN-RAGISRTLHRISAIRNRKGAIIGLT-----CRVGRAVSGSANLLQ 186
EH Q+G F I+ L + + R+ +I R V LQ
Sbjct: 66 EHRRPQLGAFKFTYAHQKINLRLSSVGDYQGRESLVIRFIYPLNDIRFNFLVPHQWERLQ 125
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
Q +LF GP G GKTT + ++AR L K+ V+ ++ EI HPG
Sbjct: 126 QYRQQRGLILFAGPMGAGKTTTMYQLARQLLP--KQIVLTIEDPVEID------HPGF-- 175
Query: 247 ARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV + M ++ L++ H P V +I EI A + A G ++ T H
Sbjct: 176 -IQLQVNELAGMNYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|78064849|ref|YP_367618.1| flagellar biosynthesis regulator FlhF [Burkholderia sp. 383]
gi|77965594|gb|ABB06974.1| GTP-binding signal recognition particle SRP54, G-domain protein
[Burkholderia sp. 383]
Length = 587
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 351 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 410
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I A+ QR
Sbjct: 411 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGANAPVQR 467
Query: 295 GIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKG 347
+ L AT+HG T+ ++ +P L I +T DE H GV TV+ K
Sbjct: 468 LLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRYKL 522
Query: 348 P 348
P
Sbjct: 523 P 523
>gi|17647857|ref|NP_523915.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|1703054|sp|P53034.1|RFC2_DROME RecName: Full=Replication factor C subunit 2; AltName:
Full=Activator 1 40 kDa subunit; Short=A1 40 kDa
subunit; AltName: Full=Activator 1 subunit 2; AltName:
Full=Replication factor C 40 kDa subunit; Short=RF-C 40
kDa subunit; Short=RFC40; AltName: Full=Replication
factor C subunit 4; Short=DmRfc4
gi|639708|gb|AAB60241.1| rfc40 [Drosophila melanogaster]
gi|7292439|gb|AAF47843.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|20151645|gb|AAM11182.1| LD40483p [Drosophila melanogaster]
gi|220944360|gb|ACL84723.1| RfC40-PA [synthetic construct]
gi|220954324|gb|ACL89705.1| RfC40-PA [synthetic construct]
Length = 331
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|195440776|ref|XP_002068216.1| GK10084 [Drosophila willistoni]
gi|194164301|gb|EDW79202.1| GK10084 [Drosophila willistoni]
Length = 333
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 50 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 107
Query: 250 MQVPNSEMQHKVLI 263
+V + +HK++I
Sbjct: 108 QKVTLPKGRHKIVI 121
>gi|447913723|ref|YP_007395135.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
gi|445189432|gb|AGE31074.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
Length = 291
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|324504215|gb|ADY41820.1| Lon protease, partial [Ascaris suum]
Length = 967
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFHGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVLIEAVENHMPQVIV--IDEIG 280
V + ++ V+ P V++ +D+IG
Sbjct: 567 VGAMPGKMIQCLKKVQTENPLVLIDEVDKIG 597
>gi|69244410|ref|ZP_00602826.1| type II secretion system protein E [Enterococcus faecium DO]
gi|293560731|ref|ZP_06677210.1| ComG operon protein 1 [Enterococcus faecium E1162]
gi|383329835|ref|YP_005355719.1| type II/IV secretion system protein [Enterococcus faecium Aus0004]
gi|415888259|ref|ZP_11549074.1| ComG operon protein 1 [Enterococcus faecium E4453]
gi|430832422|ref|ZP_19450468.1| competence protein ComGA [Enterococcus faecium E0333]
gi|430845701|ref|ZP_19463578.1| competence protein ComGA [Enterococcus faecium E1133]
gi|430856725|ref|ZP_19474410.1| competence protein ComGA [Enterococcus faecium E1392]
gi|431238734|ref|ZP_19503603.1| competence protein ComGA [Enterococcus faecium E1622]
gi|431548654|ref|ZP_19519126.1| competence protein ComGA [Enterococcus faecium E1731]
gi|431749515|ref|ZP_19538254.1| competence protein ComGA [Enterococcus faecium E2297]
gi|431755448|ref|ZP_19544097.1| competence protein ComGA [Enterococcus faecium E2883]
gi|431768392|ref|ZP_19556831.1| competence protein ComGA [Enterococcus faecium E1321]
gi|431771639|ref|ZP_19560020.1| competence protein ComGA [Enterococcus faecium E1644]
gi|431773759|ref|ZP_19562076.1| competence protein ComGA [Enterococcus faecium E2369]
gi|431779815|ref|ZP_19568005.1| competence protein ComGA [Enterococcus faecium E4389]
gi|68196351|gb|EAN10779.1| type II secretion system protein E [Enterococcus faecium DO]
gi|291605322|gb|EFF34777.1| ComG operon protein 1 [Enterococcus faecium E1162]
gi|364094923|gb|EHM37034.1| ComG operon protein 1 [Enterococcus faecium E4453]
gi|378939529|gb|AFC64601.1| type II/IV secretion system protein [Enterococcus faecium Aus0004]
gi|430480120|gb|ELA57314.1| competence protein ComGA [Enterococcus faecium E0333]
gi|430540319|gb|ELA80522.1| competence protein ComGA [Enterococcus faecium E1133]
gi|430544161|gb|ELA84205.1| competence protein ComGA [Enterococcus faecium E1392]
gi|430572435|gb|ELB11297.1| competence protein ComGA [Enterococcus faecium E1622]
gi|430590962|gb|ELB29007.1| competence protein ComGA [Enterococcus faecium E1731]
gi|430611429|gb|ELB48519.1| competence protein ComGA [Enterococcus faecium E2297]
gi|430616670|gb|ELB53565.1| competence protein ComGA [Enterococcus faecium E2883]
gi|430629467|gb|ELB65868.1| competence protein ComGA [Enterococcus faecium E1321]
gi|430633056|gb|ELB69239.1| competence protein ComGA [Enterococcus faecium E1644]
gi|430635645|gb|ELB71738.1| competence protein ComGA [Enterococcus faecium E2369]
gi|430641203|gb|ELB77016.1| competence protein ComGA [Enterococcus faecium E4389]
Length = 309
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 65 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 117
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 118 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L+ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLRLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLVR 243
>gi|209522289|ref|ZP_03270917.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia sp. H160]
gi|209497283|gb|EDZ97510.1| GTP-binding signal recognition particle SRP54 G- domain
[Burkholderia sp. H160]
Length = 338
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGDIPHPG-- 243
L++ G +GP GVGKTT ++A V+ K ++ S IGG+ + G
Sbjct: 102 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 161
Query: 244 -------IGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+ ++ +Q+ SE+++K VLI+ + +V D+I A QR
Sbjct: 162 LGVSVHAVKDSADLQLALSELRNKHIVLIDTIGMSQRDRLVSDQIAMLCR---AGQPVQR 218
Query: 295 GIQLVATAHGVTIENLIM----NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPST 350
+ L AT+HG T+ ++ P + L G + +T DE + GV TV+ K P
Sbjct: 219 LLLLNATSHGDTLNEVVQAYQRAPDQQPLAGCI--LTKIDEATNLGGVLDTVIRYKLPVH 276
Query: 351 F 351
+
Sbjct: 277 Y 277
>gi|406913341|gb|EKD52763.1| UvrB/UvrC protein [uncultured bacterium]
Length = 359
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLAN-DYKKRVMIVDTS 230
V RA++ S + L+D + G LF+G PGVGKT + + +A++ DY+ R+ IVD +
Sbjct: 50 VARAITRSISGLKDPNRPGYVGLFLGEPGVGKTEMGKAVAKIFDPLDYESRLKIVDCN 107
>gi|194866271|ref|XP_001971841.1| GG14218 [Drosophila erecta]
gi|190653624|gb|EDV50867.1| GG14218 [Drosophila erecta]
Length = 331
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|402223757|gb|EJU03821.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIAR-VLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +AR + N+Y+K+++ ++ S + G
Sbjct: 75 LLFYGPPGTGKTSTILAVARKIYGNEYRKQILELNASDDRG 115
>gi|195337341|ref|XP_002035287.1| GM14011 [Drosophila sechellia]
gi|194128380|gb|EDW50423.1| GM14011 [Drosophila sechellia]
Length = 331
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|49476075|ref|YP_034116.1| ATP-dependent Clp protease, ATP-binding subunit clpB [Bartonella
henselae str. Houston-1]
gi|49238883|emb|CAF28176.1| ATP-dependent clp protease, ATP-binding subunit clpB [Bartonella
henselae str. Houston-1]
Length = 859
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S +F+GP GVGKT + + +A L D + ++ +D S +
Sbjct: 580 VSRAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAAFLFQD-QNAMLRIDMSEYM 638
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
H G AR + P + ++ VL EAV QVI+ DEI
Sbjct: 639 E-----KHAG---ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEI 679
>gi|292625925|ref|XP_691712.4| PREDICTED: lon protease homolog, mitochondrial [Danio rerio]
Length = 966
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 530 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 579
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P V++ +D+IG + +S + +
Sbjct: 580 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLE 623
>gi|223648392|gb|ACN10954.1| Lon protease homolog, mitochondrial precursor [Salmo salar]
Length = 1014
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 577 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 626
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P V++ +D+IG + +S + +
Sbjct: 627 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLE 670
>gi|195587662|ref|XP_002083580.1| GD13291 [Drosophila simulans]
gi|194195589|gb|EDX09165.1| GD13291 [Drosophila simulans]
Length = 331
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|410920750|ref|XP_003973846.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog,
mitochondrial-like [Takifugu rubripes]
Length = 963
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 527 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 576
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 577 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 618
>gi|418001644|ref|ZP_12641781.1| late competence protein ComGA [Lactobacillus casei UCD174]
gi|410546090|gb|EKQ20361.1| late competence protein ComGA [Lactobacillus casei UCD174]
Length = 288
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 132 IEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------L 184
+EH Q+G F A R+S++ + +G L R+ + + +A L
Sbjct: 65 VEHRRVQLGAFYQRESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRL 119
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
L L+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 120 LGILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL----- 172
Query: 245 GNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ----QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVH 228
Query: 304 G 304
Sbjct: 229 A 229
>gi|257880280|ref|ZP_05659933.1| type II/IV secretion system protein [Enterococcus faecium
1,230,933]
gi|257890937|ref|ZP_05670590.1| type II/IV secretion system protein [Enterococcus faecium
1,231,410]
gi|257894193|ref|ZP_05673846.1| type II/IV secretion system protein [Enterococcus faecium
1,231,408]
gi|260562419|ref|ZP_05832933.1| type II secretion system protein E [Enterococcus faecium C68]
gi|314938548|ref|ZP_07845832.1| type II/IV secretion system protein [Enterococcus faecium
TX0133a04]
gi|314940893|ref|ZP_07847799.1| type II/IV secretion system protein [Enterococcus faecium TX0133C]
gi|314948086|ref|ZP_07851488.1| type II/IV secretion system protein [Enterococcus faecium TX0082]
gi|314952030|ref|ZP_07855053.1| type II/IV secretion system protein [Enterococcus faecium TX0133A]
gi|314991911|ref|ZP_07857366.1| type II/IV secretion system protein [Enterococcus faecium TX0133B]
gi|314995169|ref|ZP_07860283.1| type II/IV secretion system protein [Enterococcus faecium
TX0133a01]
gi|389869642|ref|YP_006377065.1| competence protein ComGA [Enterococcus faecium DO]
gi|424819831|ref|ZP_18244871.1| ComG operon protein 1 family protein [Enterococcus faecium R501]
gi|424853556|ref|ZP_18277930.1| ComG operon protein 1 family protein [Enterococcus faecium R499]
gi|424867900|ref|ZP_18291671.1| ComG operon protein 1 family protein [Enterococcus faecium R497]
gi|424959744|ref|ZP_18374310.1| ComG operon protein 1 family protein [Enterococcus faecium P1986]
gi|424963021|ref|ZP_18377292.1| ComG operon protein 1 family protein [Enterococcus faecium P1190]
gi|424969659|ref|ZP_18383216.1| ComG operon protein 1 family protein [Enterococcus faecium P1139]
gi|424974148|ref|ZP_18387398.1| ComG operon protein 1 family protein [Enterococcus faecium P1137]
gi|424976544|ref|ZP_18389627.1| ComG operon protein 1 family protein [Enterococcus faecium P1123]
gi|424979838|ref|ZP_18392670.1| ComG operon protein 1 family protein [Enterococcus faecium ERV99]
gi|424983319|ref|ZP_18395913.1| ComG operon protein 1 family protein [Enterococcus faecium ERV69]
gi|424986440|ref|ZP_18398861.1| ComG operon protein 1 family protein [Enterococcus faecium ERV38]
gi|424989761|ref|ZP_18402015.1| ComG operon protein 1 family protein [Enterococcus faecium ERV26]
gi|425007238|ref|ZP_18418376.1| ComG operon protein 1 family protein [Enterococcus faecium ERV1]
gi|425013089|ref|ZP_18423836.1| ComG operon protein 1 family protein [Enterococcus faecium E417]
gi|425020252|ref|ZP_18430569.1| ComG operon protein 1 family protein [Enterococcus faecium C497]
gi|425022605|ref|ZP_18432776.1| ComG operon protein 1 family protein [Enterococcus faecium C1904]
gi|425034223|ref|ZP_18439128.1| ComG operon protein 1 family protein [Enterococcus faecium 514]
gi|425040600|ref|ZP_18445059.1| ComG operon protein 1 family protein [Enterococcus faecium 511]
gi|425044336|ref|ZP_18448502.1| ComG operon protein 1 family protein [Enterococcus faecium 510]
gi|425047493|ref|ZP_18451443.1| ComG operon protein 1 family protein [Enterococcus faecium 509]
gi|425051977|ref|ZP_18455614.1| ComG operon protein 1 family protein [Enterococcus faecium 506]
gi|425059722|ref|ZP_18463046.1| ComG operon protein 1 family protein [Enterococcus faecium 503]
gi|257814508|gb|EEV43266.1| type II/IV secretion system protein [Enterococcus faecium
1,230,933]
gi|257827297|gb|EEV53923.1| type II/IV secretion system protein [Enterococcus faecium
1,231,410]
gi|257830572|gb|EEV57179.1| type II/IV secretion system protein [Enterococcus faecium
1,231,408]
gi|260073343|gb|EEW61684.1| type II secretion system protein E [Enterococcus faecium C68]
gi|313590578|gb|EFR69423.1| type II/IV secretion system protein [Enterococcus faecium
TX0133a01]
gi|313593495|gb|EFR72340.1| type II/IV secretion system protein [Enterococcus faecium TX0133B]
gi|313595820|gb|EFR74665.1| type II/IV secretion system protein [Enterococcus faecium TX0133A]
gi|313600251|gb|EFR79094.1| type II/IV secretion system protein [Enterococcus faecium TX0133C]
gi|313642105|gb|EFS06685.1| type II/IV secretion system protein [Enterococcus faecium
TX0133a04]
gi|313645502|gb|EFS10082.1| type II/IV secretion system protein [Enterococcus faecium TX0082]
gi|388534891|gb|AFK60083.1| competence protein ComGA [Enterococcus faecium DO]
gi|402925844|gb|EJX45938.1| ComG operon protein 1 family protein [Enterococcus faecium R501]
gi|402932678|gb|EJX52167.1| ComG operon protein 1 family protein [Enterococcus faecium R499]
gi|402937561|gb|EJX56664.1| ComG operon protein 1 family protein [Enterococcus faecium R497]
gi|402949675|gb|EJX67720.1| ComG operon protein 1 family protein [Enterococcus faecium P1986]
gi|402950619|gb|EJX68609.1| ComG operon protein 1 family protein [Enterococcus faecium P1190]
gi|402957288|gb|EJX74685.1| ComG operon protein 1 family protein [Enterococcus faecium P1137]
gi|402963661|gb|EJX80512.1| ComG operon protein 1 family protein [Enterococcus faecium P1139]
gi|402968092|gb|EJX84594.1| ComG operon protein 1 family protein [Enterococcus faecium ERV99]
gi|402969337|gb|EJX85760.1| ComG operon protein 1 family protein [Enterococcus faecium P1123]
gi|402971917|gb|EJX88157.1| ComG operon protein 1 family protein [Enterococcus faecium ERV69]
gi|402976554|gb|EJX92440.1| ComG operon protein 1 family protein [Enterococcus faecium ERV38]
gi|402981138|gb|EJX96686.1| ComG operon protein 1 family protein [Enterococcus faecium ERV26]
gi|402995423|gb|EJY09886.1| ComG operon protein 1 family protein [Enterococcus faecium ERV1]
gi|403001901|gb|EJY15920.1| ComG operon protein 1 family protein [Enterococcus faecium E417]
gi|403009647|gb|EJY23076.1| ComG operon protein 1 family protein [Enterococcus faecium C497]
gi|403012454|gb|EJY25679.1| ComG operon protein 1 family protein [Enterococcus faecium C1904]
gi|403020919|gb|EJY33408.1| ComG operon protein 1 family protein [Enterococcus faecium 514]
gi|403028255|gb|EJY40090.1| ComG operon protein 1 family protein [Enterococcus faecium 511]
gi|403030141|gb|EJY41853.1| ComG operon protein 1 family protein [Enterococcus faecium 510]
gi|403033478|gb|EJY44978.1| ComG operon protein 1 family protein [Enterococcus faecium 509]
gi|403036116|gb|EJY47483.1| ComG operon protein 1 family protein [Enterococcus faecium 506]
gi|403043341|gb|EJY54257.1| ComG operon protein 1 family protein [Enterococcus faecium 503]
Length = 317
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ +R
Sbjct: 73 MDIGEKRKAQLGAFTYSLEKQEVRLR-----LSSVGDY-LQRESLVIRLLYGTFETPHR- 125
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
C R A +LQ V+ G LF GP G GKT+++ LA + K +V
Sbjct: 126 -------CFSSRDF---ATILQKTVRRGL-YLFSGPVGSGKTSLMYR----LALEEKLQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L+ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLRLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLVR 251
>gi|194750805|ref|XP_001957720.1| GF23886 [Drosophila ananassae]
gi|190625002|gb|EDV40526.1| GF23886 [Drosophila ananassae]
Length = 331
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|218296645|ref|ZP_03497363.1| ATP-dependent protease La [Thermus aquaticus Y51MC23]
gi|218242958|gb|EED09491.1| ATP-dependent protease La [Thermus aquaticus Y51MC23]
Length = 804
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 172 CRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
+V RA G + ++ V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 337 LKVERARRG--EIPEEEVNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 383
>gi|403530923|ref|YP_006665452.1| ATP-dependent Clp protease, ATP-binding subunit clpB [Bartonella
quintana RM-11]
gi|403232994|gb|AFR26737.1| ATP-dependent Clp protease, ATP-binding subunit clpB [Bartonella
quintana RM-11]
Length = 977
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S +F+GP GVGKT + + +A L D + ++ +D S +
Sbjct: 678 VSRAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAIFLFQD-QNAMLRIDMSEYM 736
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
H G AR + P + ++ VL EAV QVI+ DEI
Sbjct: 737 E-----KHAG---ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEI 777
>gi|239631877|ref|ZP_04674908.1| type II secretory pathway/competence [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|417980229|ref|ZP_12620910.1| ComGA family late competence protein [Lactobacillus casei 12A]
gi|239526342|gb|EEQ65343.1| type II secretory pathway/competence [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|410525456|gb|EKQ00358.1| ComGA family late competence protein [Lactobacillus casei 12A]
Length = 288
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI P
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEIN------QPQFS 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|299744561|ref|XP_002910805.1| hsp78-like protein [Coprinopsis cinerea okayama7#130]
gi|298406184|gb|EFI27311.1| hsp78-like protein [Coprinopsis cinerea okayama7#130]
Length = 741
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 46/199 (23%)
Query: 199 GPPGVGKTTIIREIA-RVLAND-----YKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
GPPGVGKT I+ +A R++A + + KRV+ +D ++ + G+G R Q
Sbjct: 51 GPPGVGKTAIVEGLANRIIAKEVPESLHNKRVLSIDLAAIVAGSG----------IRGQF 100
Query: 253 PNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLI 311
E + K LI+ +E VI IDEI T + A G +
Sbjct: 101 ---EEKFKALIKDIEEEASNVICFIDEIHTLFN--------------IGKAEGSVDGGQM 143
Query: 312 MNPSLE---MLIGGVQ----NVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVS--KTE 362
+ PSL L+G T+G + A R Q ++ T + I+ K +
Sbjct: 144 IKPSLARGLRLVGATTPDEYRKTIGKDAALERRFQPVTIDE---PTVGATISILRGLKPK 200
Query: 363 LRVHHSLEATVDAILSGRI 381
VHH +E + A+++ +
Sbjct: 201 YEVHHGVEISDGALVTAAV 219
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 116 PSGDFSLSDCQITVHHIEHATSQVGDFAVDN--RAGISRTLHRISAIRNRKGAIIGLTCR 173
P G S+ ++T + I + V N + + +H A+ R +
Sbjct: 365 PEGPLSMLHNRVTSNDIARVVGRATGIPVQNLLKGERDKLVHMEEALEARVVGQDHVVTA 424
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTS 230
+ AV S LQ + AS LF+GP GVGKT + + +A L ND K+ ++ ++ S
Sbjct: 425 ISDAVRISRAGLQAPNRPVASFLFMGPTGVGKTELCKALAAFLFNDEKRGLITINMS 481
>gi|206558547|ref|YP_002229307.1| flagellar biosynthesis regulator FlhF [Burkholderia cenocepacia
J2315]
gi|198034584|emb|CAR50450.1| putative flagellar biosynthesis protein [Burkholderia cenocepacia
J2315]
Length = 599
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 363 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 422
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAM--AASTIA 292
+P + +A + + SE+++K VLI+ + V D+I AM A+
Sbjct: 423 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQI-----AMLHGANAPV 477
Query: 293 QRGIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
QR + L AT+HG T+ ++ +P L I +T DE H GV TV+
Sbjct: 478 QRLLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRY 532
Query: 346 KGP 348
K P
Sbjct: 533 KLP 535
>gi|195491632|ref|XP_002093645.1| GE20646 [Drosophila yakuba]
gi|194179746|gb|EDW93357.1| GE20646 [Drosophila yakuba]
Length = 331
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK+ V+ ++ S+E G D+ I +
Sbjct: 48 NAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|380021396|ref|XP_003694552.1| PREDICTED: ATPase WRNIP1-like [Apis florea]
Length = 444
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 178 VSGSANLLQDLVQDG--ASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGG 235
V GS +LQ L+ G S++F GPPG GKT++ I+++ + ++V I++ S+ G
Sbjct: 33 VVGSNTILQQLLTKGHIPSMIFWGPPGCGKTSLTNIISKLSKEMHGEKVNIINLSATSSG 92
Query: 236 NGDI 239
+I
Sbjct: 93 VSNI 96
>gi|426196408|gb|EKV46336.1| hypothetical protein AGABI2DRAFT_185786 [Agaricus bisporus var.
bisporus H97]
Length = 776
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLANDY-----KKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R+++ + KRV+ +D +S + G+ GI A
Sbjct: 85 VLIGPPGVGKTAILEGLASRIVSKEVPESLQNKRVLSIDLASILAGS------GIRGA-- 136
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
E + K L+ +E+ +I IDEI T + A G
Sbjct: 137 -----FEEKFKSLLRDIEDQTGSIICFIDEIHTLFR--------------LGKAEGSIDA 177
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK-TVLERK------GPSTFSCAVEIVS-- 359
++ P+L G+Q V + +R+ + K LER+ T S + I+
Sbjct: 178 GQMIKPALAR---GLQLVGATTPDEYRKNIAKDAALERRFQPIQITEPTVSSTISILRGL 234
Query: 360 KTELRVHHSLEATVDAILSGRI 381
K+ VHH +E + A+++ +
Sbjct: 235 KSRYEVHHGVEISDSALVTAAV 256
>gi|167912989|ref|ZP_02500080.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
112]
Length = 386
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 145 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 204
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 205 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 261
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 262 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 319
Query: 346 KGPSTF 351
K P +
Sbjct: 320 KLPVHY 325
>gi|417992571|ref|ZP_12632926.1| late competence protein ComGA [Lactobacillus casei CRF28]
gi|410533150|gb|EKQ07837.1| late competence protein ComGA [Lactobacillus casei CRF28]
Length = 288
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A + R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESA----SFLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL------ 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|315122701|ref|YP_004063190.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496103|gb|ADR52702.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 855
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQD + S +F+GP GVGKT +++ +AR+L +D + I D S + +
Sbjct: 591 LQDPRRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRI-DMSEYMEKH-------- 641
Query: 245 GNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+R + P + ++ +L EAV H QV++ DE+
Sbjct: 642 SVSRLIGAPPGYVGYEEGGILTEAVRRHPYQVVLFDEM 679
>gi|351712197|gb|EHB15116.1| Lon protease-like protein, mitochondrial [Heterocephalus glaber]
Length = 895
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 450 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 499
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 500 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 541
>gi|297567008|ref|YP_003685980.1| ATP-dependent protease La [Meiothermus silvanus DSM 9946]
gi|296851457|gb|ADH64472.1| ATP-dependent protease La [Meiothermus silvanus DSM 9946]
Length = 817
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
V G LLF+GPPGVGKT+I + IA+ L Y
Sbjct: 360 VAKGPILLFVGPPGVGKTSIAKSIAKSLGRKY 391
>gi|444315053|ref|XP_004178184.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
gi|387511223|emb|CCH58665.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
Length = 1189
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGN-----GDIPHPGI 244
DG L F+GPPGVGKT+I + IAR L+ + Y+ V + +EI G+ G +P I
Sbjct: 675 DGKILCFVGPPGVGKTSIGKSIARSLSREFYRFSVGGLTDVAEIKGHRRTYIGALPGRII 734
Query: 245 GNARRMQVPN 254
++ Q N
Sbjct: 735 QAMKKCQTQN 744
>gi|309812714|ref|ZP_07706458.1| ATPase, AAA family [Dermacoccus sp. Ellin185]
gi|308433409|gb|EFP57297.1| ATPase, AAA family [Dermacoccus sp. Ellin185]
Length = 946
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMI---VDTSSEIGGNGDIPH 241
+ +L+QD L+F GPPG GKT + + A L D KR ++ TS E G P
Sbjct: 663 IDELLQDKKQLIFYGPPGTGKTFMAQRFAAALQPDPTKRAVVQFHPSTSYEDFFEGFRPR 722
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
A ++ + + P ++VIDEI
Sbjct: 723 LDAAGAMVYELRKGPLALMAEAAEADPTTPHIMVIDEI 760
>gi|348550316|ref|XP_003460978.1| PREDICTED: lon protease homolog, mitochondrial-like [Cavia
porcellus]
Length = 963
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 607
>gi|75069980|sp|Q59HJ6.1|LONM_BOVIN RecName: Full=Lon protease homolog, mitochondrial; AltName:
Full=Lon protease-like protein; Short=LONP; AltName:
Full=Mitochondrial ATP-dependent protease Lon; AltName:
Full=Serine protease 15; Flags: Precursor
gi|62084374|dbj|BAD91492.1| ATP-dependent Lon protease [Bos taurus]
Length = 961
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 608
>gi|167904711|ref|ZP_02491916.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
NCTC 13177]
Length = 391
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 150 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 209
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 210 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 266
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 267 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 324
Query: 346 KGPSTF 351
K P +
Sbjct: 325 KLPVHY 330
>gi|167896337|ref|ZP_02483739.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
7894]
Length = 360
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 119 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 178
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 179 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 235
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 236 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 293
Query: 346 KGPSTF 351
K P +
Sbjct: 294 KLPVHY 299
>gi|134085346|ref|NP_001015569.2| lon protease homolog, mitochondrial precursor [Bos taurus]
gi|126920922|gb|AAI33506.1| Lon peptidase 1, mitochondrial [Bos taurus]
gi|296485747|tpg|DAA27862.1| TPA: lon protease homolog, mitochondrial precursor [Bos taurus]
Length = 961
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 608
>gi|308802412|ref|XP_003078519.1| unnamed protein product [Ostreococcus tauri]
gi|116056972|emb|CAL51399.1| unnamed protein product [Ostreococcus tauri]
Length = 260
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 558 EARVAIEQVVIPKGESVELLPRPSYILSIQIDLIRKYQLHYQR 600
E R+A+EQ+VIP + VELLPR + I+++Q L+ Y L + +
Sbjct: 217 EVRMAVEQLVIPHRDPVELLPRSNRIIALQQALVDTYSLSHSK 259
>gi|107024381|ref|YP_622708.1| flagellar biosynthesis regulator FlhF [Burkholderia cenocepacia AU
1054]
gi|116688293|ref|YP_833916.1| flagellar biosynthesis regulator FlhF [Burkholderia cenocepacia
HI2424]
gi|105894570|gb|ABF77735.1| GTP-binding signal recognition particle SRP54, G-domain protein
[Burkholderia cenocepacia AU 1054]
gi|116646382|gb|ABK07023.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Burkholderia cenocepacia HI2424]
Length = 592
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 356 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 415
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAM--AASTIA 292
+P + +A + + SE+++K VLI+ + V D+I AM A+
Sbjct: 416 LGVPVHAVKDAGDLALALSELRNKHIVLIDTIGMSQRDRAVSDQI-----AMLHGANAPV 470
Query: 293 QRGIQLVATAHGVTIENLIM-------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
QR + L AT+HG T+ ++ +P L I +T DE H GV TV+
Sbjct: 471 QRLLLLNATSHGDTLNEVVQAYRSAGEHPDLAGCI-----LTKLDEATHLGGVLDTVIRY 525
Query: 346 KGP 348
K P
Sbjct: 526 KLP 528
>gi|426229115|ref|XP_004008638.1| PREDICTED: lon protease homolog, mitochondrial [Ovis aries]
Length = 945
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 499 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 548
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 549 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 590
>gi|148706232|gb|EDL38179.1| protease, serine, 15, isoform CRA_a [Mus musculus]
Length = 515
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 71 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 120
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 121 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 162
>gi|321456941|gb|EFX68037.1| hypothetical protein DAPPUDRAFT_301682 [Daphnia pulex]
Length = 356
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 184 LLQDLVQ--DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIG 234
+LQ +Q D +LLF GPPG GKT+ I AR L D YK RV+ ++ S E G
Sbjct: 57 VLQKSLQGADLPNLLFYGPPGTGKTSTILAAARDLFGDIYKDRVLELNASDERG 110
>gi|305667583|ref|YP_003863870.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Maribacter
sp. HTCC2170]
gi|88709633|gb|EAR01866.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Maribacter
sp. HTCC2170]
Length = 849
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 44/198 (22%)
Query: 196 LFIGPPGVGKTTIIREIARVLAND------YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
L IG PGVGK+ I +A + N Y KRV+ +D +S + G R
Sbjct: 236 LLIGEPGVGKSAIAEGLALRIINKKVSRILYNKRVVTLDLASLVA----------GTKYR 285
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIEN 309
Q E + K ++ +E + ++ IDEI T + A A+ G +
Sbjct: 286 GQF---EERMKAVMNELEKNDDVILFIDEIHTIVGAGGAT--------------GSLDAS 328
Query: 310 LIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKT-VLERK------GPSTFSCAVEIVS--K 360
+ P+L G +Q + + +R+ ++K LER+ P++ S +EI+ K
Sbjct: 329 NMFKPALAR--GEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTSVSETIEILQNIK 386
Query: 361 TELRVHHSLEATVDAILS 378
+ HH++E T DAI++
Sbjct: 387 GKYEEHHNVEYTDDAIVA 404
>gi|409081174|gb|EKM81533.1| hypothetical protein AGABI1DRAFT_125912 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 790
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLANDY-----KKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R+++ + KRV+ +D +S + G+ GI A
Sbjct: 99 VLIGPPGVGKTAILEGLASRIVSKEVPESLQNKRVLSIDLASILAGS------GIRGA-- 150
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
E + K L+ +E+ +I IDEI T + + A G
Sbjct: 151 -----FEEKFKSLLRDIEDQTGSIICFIDEIHTLFQ--------------LGKAEGSIDA 191
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK-TVLERK------GPSTFSCAVEIVS-- 359
++ P+L G+Q V + +R+ + K LER+ T S + I+
Sbjct: 192 GQMIKPALAR---GLQLVGATTPDEYRKNIAKDAALERRFQPVQITEPTVSSTISILRGL 248
Query: 360 KTELRVHHSLEATVDAILSGRI 381
K+ VHH +E A+++ +
Sbjct: 249 KSRYEVHHGVEIADSALVTAAV 270
>gi|403295937|ref|XP_003938878.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Saimiri
boliviensis boliviensis]
Length = 976
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 533 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 582
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 583 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 624
>gi|342349346|ref|NP_001230149.1| lon peptidase 1, mitochondrial [Sus scrofa]
Length = 960
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 607
>gi|167817861|ref|ZP_02449541.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
91]
Length = 384
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 143 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 202
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 203 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 259
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 260 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 317
Query: 346 KGPSTF 351
K P +
Sbjct: 318 KLPVHY 323
>gi|239623569|ref|ZP_04666600.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521600|gb|EEQ61466.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 463
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 184 LLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSS--EIGGNGDIPH 241
+L D + G+ +L G PG+GK+T++ ++ R LA +K + I S +I +
Sbjct: 91 VLGDGIVSGSLVLVGGDPGIGKSTLLLQVCRHLAGAGRKVLYISGEESLKQIKMRANRIG 150
Query: 242 PGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLE---AMAASTIAQ----- 293
P G R + E + A+E MPQ+ VID I T + A +++Q
Sbjct: 151 PVTGELRFL----CETSLDRIEHAIETEMPQIAVIDSIQTMYREEISSAPGSVSQVREST 206
Query: 294 ---------RGIQLVATAHGVTIENLIMNP 314
RGI + H VT E ++ P
Sbjct: 207 AILMQIAKSRGIAIFVVGH-VTKEGVVAGP 235
>gi|350580670|ref|XP_003354072.2| PREDICTED: lon protease homolog, mitochondrial-like, partial [Sus
scrofa]
Length = 902
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 607
>gi|358336092|dbj|GAA54652.1| lon-like ATP-dependent protease [Clonorchis sinensis]
Length = 1007
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L Y + +GG D+ I RR
Sbjct: 537 GKILCFHGPPGVGKTSIARSIARALNRKYFR--------FSVGGMSDVSE--IKGHRRTY 586
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M KV+ ++ + P +++ ID++G + AS +
Sbjct: 587 V--GAMPGKVIQCLKKTKTENPLILIDEIDKLGRGWQGDPASAL 628
>gi|354479290|ref|XP_003501845.1| PREDICTED: lon protease homolog, mitochondrial-like [Cricetulus
griseus]
Length = 965
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 521 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 570
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 571 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 612
>gi|126459667|ref|YP_001055945.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
gi|126249388|gb|ABO08479.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
Length = 342
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
V+ G L+ GPPG GKTT++ I ++ +++ + +D + E + D
Sbjct: 197 VKGGKHLVVAGPPGAGKTTLLVAIDELIPPTWQR--VYIDEADEFDEDPD---------- 244
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
+ Q+ +++ I A N V+ I E+ + A T + G+Q AT H TIE
Sbjct: 245 KNQIKIADVNKSREIYASLNRNIDVVFIGELQYEDHFNAFKTATEIGLQTFATMHAATIE 304
Query: 309 N 309
+
Sbjct: 305 D 305
>gi|384439768|ref|YP_005654492.1| Lon protease [Thermus sp. CCB_US3_UF1]
gi|359290901|gb|AEV16418.1| Lon protease [Thermus sp. CCB_US3_UF1]
Length = 818
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 362 VNKGPILLFVGPPGVGKTSIAKSIAEALGRKY 393
>gi|260654670|ref|ZP_05860160.1| negative regulator of genetic competence ClpC/MecB [Jonquetella
anthropi E3_33 E1]
gi|424844626|ref|ZP_18269237.1| ATPase with chaperone activity, ATP-binding subunit [Jonquetella
anthropi DSM 22815]
gi|260630686|gb|EEX48880.1| negative regulator of genetic competence ClpC/MecB [Jonquetella
anthropi E3_33 E1]
gi|363986064|gb|EHM12894.1| ATPase with chaperone activity, ATP-binding subunit [Jonquetella
anthropi DSM 22815]
Length = 826
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 170 LTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDT 229
++C V RA+ + + LQD + S LF+GP GVGKT + R +AR L K ++ +D
Sbjct: 524 VSC-VCRALRRNRSGLQDEKRPIGSFLFLGPSGVGKTELARVVARELYGS-DKALIALDM 581
Query: 230 S--------SEIGGNGDIPHPG-IGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
S S + G G PG +G R Q L EAV H V+++DEI
Sbjct: 582 SEFHDRYTVSRLIGTG----PGYVGYEDRGQ----------LTEAVRRHPYSVVLLDEI 626
>gi|167740653|ref|ZP_02413427.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
14]
gi|167847747|ref|ZP_02473255.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
B7210]
Length = 367
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 126 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 185
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 186 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 242
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 243 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 300
Query: 346 KGPSTF 351
K P +
Sbjct: 301 KLPVHY 306
>gi|442749365|gb|JAA66842.1| Putative replication factor c subunit rfc4 [Ixodes ricinus]
Length = 274
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIG 234
L D +LLF GPPG GKT+ I ++R L D YK R++ ++ S E G
Sbjct: 88 LGADLPNLLFYGPPGTGKTSTILALSRELFGDMYKSRILELNASDERG 135
>gi|441656649|ref|XP_003280643.2| PREDICTED: lon protease homolog, mitochondrial [Nomascus
leucogenys]
Length = 795
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 378 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 427
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 428 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 469
>gi|410080556|ref|XP_003957858.1| hypothetical protein KAFR_0F01270 [Kazachstania africana CBS 2517]
gi|372464445|emb|CCF58723.1| hypothetical protein KAFR_0F01270 [Kazachstania africana CBS 2517]
Length = 993
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKK 222
LL +GPPGVGKT+I+R IA VL Y++
Sbjct: 506 LLLVGPPGVGKTSIVRSIASVLNRKYQR 533
>gi|19173766|ref|NP_596895.1| lon protease homolog, mitochondrial precursor [Rattus norvegicus]
gi|81916424|sp|Q924S5.1|LONM_RAT RecName: Full=Lon protease homolog, mitochondrial; AltName:
Full=Lon protease-like protein; Short=LONP; AltName:
Full=Mitochondrial ATP-dependent protease Lon; AltName:
Full=Serine protease 15; Flags: Precursor
gi|15076622|dbj|BAB62423.1| Lon [Rattus norvegicus]
gi|149028183|gb|EDL83621.1| protease, serine, 15 [Rattus norvegicus]
Length = 950
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 506 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 555
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 556 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 597
>gi|403295939|ref|XP_003938879.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Saimiri
boliviensis boliviensis]
Length = 763
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 369
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 370 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 411
>gi|344237625|gb|EGV93728.1| Lon protease-like, mitochondrial [Cricetulus griseus]
Length = 842
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 398 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 447
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 448 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 489
>gi|241829143|ref|XP_002414742.1| replication factor C, subunit RFC4, putative [Ixodes scapularis]
gi|215508954|gb|EEC18407.1| replication factor C, subunit RFC4, putative [Ixodes scapularis]
Length = 363
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIG 234
D +LLF GPPG GKT+ I ++R L D YK R++ ++ S E G
Sbjct: 65 DLPNLLFYGPPGTGKTSTILALSRELFGDMYKSRILELNASDERG 109
>gi|148706233|gb|EDL38180.1| protease, serine, 15, isoform CRA_b [Mus musculus]
Length = 978
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 534 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 583
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 584 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 625
>gi|53724310|ref|YP_104356.1| flagellar biosynthesis regulator FlhF [Burkholderia mallei ATCC
23344]
gi|67639809|ref|ZP_00438642.1| flagellar biosynthesis protein FlhF [Burkholderia mallei GB8 horse
4]
gi|121598247|ref|YP_994699.1| flagellar biosynthesis regulator FlhF [Burkholderia mallei SAVP1]
gi|124385699|ref|YP_001027677.1| flagellar biosynthesis regulator FlhF [Burkholderia mallei NCTC
10229]
gi|167002949|ref|ZP_02268739.1| putative flagellar biosynthetic protein FlhF [Burkholderia mallei
PRL-20]
gi|52427733|gb|AAU48326.1| flagellar biosynthetic protein FlhF, putative [Burkholderia mallei
ATCC 23344]
gi|121227057|gb|ABM49575.1| putative flagellar biosynthetic protein FlhF [Burkholderia mallei
SAVP1]
gi|238520419|gb|EEP83879.1| flagellar biosynthesis protein FlhF [Burkholderia mallei GB8 horse
4]
gi|243061440|gb|EES43626.1| putative flagellar biosynthetic protein FlhF [Burkholderia mallei
PRL-20]
Length = 374
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 133 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 192
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 193 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 249
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 250 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 307
Query: 346 KGPSTF 351
K P +
Sbjct: 308 KLPVHY 313
>gi|240851109|ref|YP_002972511.1| ATP-dependent clp protease, ATP-binding subunit ClpB [Bartonella
grahamii as4aup]
gi|240268232|gb|ACS51820.1| ATP-dependent clp protease, ATP-binding subunit ClpB [Bartonella
grahamii as4aup]
Length = 859
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S +F+GP GVGKT + + +A L D ++ +D S +
Sbjct: 580 VSRAVRRARAGLQDPNRPLGSFMFLGPTGVGKTELTKALAAFLFQDSNA-MLRIDMSEYM 638
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
H G AR + P + ++ VL EAV QVI+ DEI
Sbjct: 639 E-----KHAG---ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEI 679
>gi|255076393|ref|XP_002501871.1| lon protease [Micromonas sp. RCC299]
gi|226517135|gb|ACO63129.1| lon protease [Micromonas sp. RCC299]
Length = 904
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKK 222
L F GPPGVGKTT+ R IARVL+ +++
Sbjct: 412 LCFTGPPGVGKTTLARSIARVLSRPFQR 439
>gi|167721671|ref|ZP_02404907.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei
DM98]
Length = 367
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 126 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 185
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 186 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 242
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 243 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 300
Query: 346 KGPSTF 351
K P +
Sbjct: 301 KLPVHY 306
>gi|26984237|gb|AAN85210.1| mitochondrial ATP-dependent protease Lon [Mus musculus]
Length = 949
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|74192936|dbj|BAE34972.1| unnamed protein product [Mus musculus]
Length = 949
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|74182120|dbj|BAE34094.1| unnamed protein product [Mus musculus]
Length = 949
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|241060074|ref|XP_002407985.1| ATP-dependent protease PIM1/LON, putative [Ixodes scapularis]
gi|215492328|gb|EEC01969.1| ATP-dependent protease PIM1/LON, putative [Ixodes scapularis]
Length = 857
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 423 GKMLCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 472
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P V++ +D+IG + +S + +
Sbjct: 473 V--GAMPGKLIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLE 516
>gi|190893119|ref|YP_001979661.1| nitrate/sulfonate ABC transporter ATP-binding protein [Rhizobium
etli CIAT 652]
gi|417099669|ref|ZP_11959864.1| putative nitrate/sulfonate ABC transporter, ATP-binding protein
[Rhizobium etli CNPAF512]
gi|190698398|gb|ACE92483.1| probable nitrate/sulfonate ABC transporter, ATP-binding protein
[Rhizobium etli CIAT 652]
gi|327192555|gb|EGE59505.1| putative nitrate/sulfonate ABC transporter, ATP-binding protein
[Rhizobium etli CNPAF512]
Length = 261
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 24/119 (20%)
Query: 172 CRVGRAVSGSANLLQDL---VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
C +A G N L D+ V+ G + FIGP G GKTT +R IA D +K
Sbjct: 13 CLTYQANDGPVNALSDVNLDVRKGDFVSFIGPSGCGKTTFLRVIA-----DLEK-----S 62
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMA 287
TS EI NG P AR+ + Q L +P ++ D I LE M
Sbjct: 63 TSGEISINGMTPE----EARKARAYGYVFQAPAL-------LPWRVIEDNIALPLEIMG 110
>gi|167826239|ref|ZP_02457710.1| flagellar biosynthesis regulator FlhF [Burkholderia pseudomallei 9]
Length = 369
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 128 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 187
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 188 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 244
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 245 LLLLNATSHGDTLNEVVQAYRSAAGQPKAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 302
Query: 346 KGPSTF 351
K P +
Sbjct: 303 KLPVHY 308
>gi|449266825|gb|EMC77822.1| Lon protease like protein, mitochondrial, partial [Columba livia]
Length = 699
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 372 GKILCFYGPPGVGKTSIARSIARALNREY 400
>gi|74203414|dbj|BAE20868.1| unnamed protein product [Mus musculus]
Length = 953
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 509 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 558
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 559 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 600
>gi|345323907|ref|XP_001506549.2| PREDICTED: lon protease homolog, mitochondrial, partial
[Ornithorhynchus anatinus]
Length = 829
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 417 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 466
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIVIDEI 279
V M K++ ++ + P +I+IDE+
Sbjct: 467 V--GAMPGKIIQCLKKTKTENP-LILIDEV 493
>gi|116089322|ref|NP_083058.2| lon protease homolog, mitochondrial precursor [Mus musculus]
gi|118573575|sp|Q8CGK3.2|LONM_MOUSE RecName: Full=Lon protease homolog, mitochondrial; AltName:
Full=Lon protease-like protein; Short=LONP; AltName:
Full=Mitochondrial ATP-dependent protease Lon; AltName:
Full=Serine protease 15; Flags: Precursor
gi|74213600|dbj|BAE35606.1| unnamed protein product [Mus musculus]
gi|162317882|gb|AAI56651.1| Lon peptidase 1, mitochondrial [synthetic construct]
Length = 949
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|436842093|ref|YP_007326471.1| class III heat-shock ATP-dependent LonA protease [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170999|emb|CCO24370.1| class III heat-shock ATP-dependent LonA protease [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 817
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 185 LQDLVQ--DGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM-IVDTSSEIGGN----- 236
+Q LV+ G L F GPPGVGKT+I R IAR + ++ + + V +EI G+
Sbjct: 352 VQSLVETIKGPILCFAGPPGVGKTSIARSIARAMGREFVRLSLGGVRDEAEIRGHRRTYV 411
Query: 237 GDIPHPGIGNARRMQVPN 254
G +P I + RR + N
Sbjct: 412 GALPGKIIQSMRRCEFSN 429
>gi|74187378|dbj|BAE36666.1| unnamed protein product [Mus musculus]
Length = 949
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|440901075|gb|ELR52074.1| Lon protease-like protein, mitochondrial, partial [Bos grunniens
mutus]
Length = 882
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 438 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 487
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P V++ +D+IG + +S + +
Sbjct: 488 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLE 531
>gi|12836291|dbj|BAB23591.1| unnamed protein product [Mus musculus]
Length = 949
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 505 GKILCFHGPPGVGKTSIARSIARALGREYFR--------FSVGGMTDVAE--IKGHRRTY 554
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P V++ +D+IG + +S +
Sbjct: 555 V--GAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSAL 596
>gi|255731300|ref|XP_002550574.1| activator 1 41 kDa subunit [Candida tropicalis MYA-3404]
gi|240131583|gb|EER31142.1| activator 1 41 kDa subunit [Candida tropicalis MYA-3404]
Length = 354
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 195 LLFIGPPGVGKTTIIREIARVL--ANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV 252
+LF GPPG GKT+ I +A+ L N YK RV+ ++ S E G + I I N R+ +
Sbjct: 57 MLFYGPPGTGKTSTILALAKTLYGPNLYKSRVLELNASDERGIS--IVREKIKNFARLTI 114
Query: 253 PN 254
N
Sbjct: 115 SN 116
>gi|427442754|ref|ZP_18925726.1| competence protein ComGA [Pediococcus lolii NGRI 0510Q]
gi|425786627|dbj|GAC46514.1| competence protein ComGA [Pediococcus lolii NGRI 0510Q]
Length = 310
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-P 253
++F GP G GKTT+I EIA+ L+ K VM ++ EI N N ++QV
Sbjct: 127 IVFSGPTGSGKTTLIYEIAKKLSGS--KLVMSIEDPVEIQEN---------NFLQLQVNE 175
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
S M ++ L+++ + P + +I EI A A A G ++ T H + E +
Sbjct: 176 KSGMTYQALLKSGLRNRPDIFIIGEIRDSKTAEIAVQAALSGHLVLTTLHCKSTEGV 232
>gi|346464509|gb|AEO32099.1| hypothetical protein [Amblyomma maculatum]
Length = 1017
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 585 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 634
Query: 252 VPNSEMQHKVLIEAV--ENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K LI+ + +N P V++ +D+IG + +S +
Sbjct: 635 V--GAMPGK-LIQCLKDKNGNPLVLIDEVDKIGRGYQGDPSSAL 675
>gi|357589477|ref|ZP_09128143.1| putative FtsK/SpoIIIE family protein [Corynebacterium nuruki S6-4]
Length = 1100
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 31/191 (16%)
Query: 197 FIGPPGVGKTTIIREIARVLA-NDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVP-- 253
+G PG GKTT +R + LA V ++D GG D+ AR QV
Sbjct: 655 LVGAPGTGKTTAVRALVVGLALRSPGVAVYVIDPG---GGLADL-------ARLPQVAAV 704
Query: 254 -NSEMQHKVLIEAVENHMP--QVIVID------EIGTKLEAMAASTIAQRGIQLVATAHG 304
+++ +VL E +E P +V+V+D E +L +AA + RG+ +V
Sbjct: 705 VTTDLLDRVLDE-LEQDAPAHRVLVVDGLDAVGEADRRLATLAAGGLG-RGVHVV----- 757
Query: 305 VTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTV--LERKGPSTFSCAVEIVSKTE 362
VT + PSL+ L+GG + + +A R Q+T+ L +G S +++++ T
Sbjct: 758 VTAQRWTFRPSLKDLLGGHVELRMTPADADFRDAQRTLPDLPGRGVSPDGKHLQVIAATP 817
Query: 363 LRVHHSLEATV 373
H+ +V
Sbjct: 818 QDTEHARRVSV 828
>gi|326934254|ref|XP_003213207.1| PREDICTED: lon protease homolog, mitochondrial-like [Meleagris
gallopavo]
Length = 815
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 379 GKILCFYGPPGVGKTSIARSIARALNREY 407
>gi|304385210|ref|ZP_07367555.1| competence protein ComGA [Pediococcus acidilactici DSM 20284]
gi|304328417|gb|EFL95638.1| competence protein ComGA [Pediococcus acidilactici DSM 20284]
Length = 320
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-P 253
++F GP G GKTT+I EIA+ L+ K VM ++ EI N N ++QV
Sbjct: 137 IVFSGPTGSGKTTLIYEIAKKLSGS--KLVMSIEDPVEIQEN---------NFLQLQVNE 185
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
S M ++ L+++ + P + +I EI A A A G ++ T H + E + +
Sbjct: 186 KSGMTYQALLKSGLRNRPDIFIIGEIRDSKTAEIAVQAALSGHLVLTTLHCKSTEG-VWD 244
Query: 314 PSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGP 348
LE+ GVQ E+ + + T+ +R P
Sbjct: 245 RLLEL---GVQ------EDYLKEALTATIYQRIIP 270
>gi|219882752|ref|YP_002477916.1| type II secretion system protein E [Arthrobacter chlorophenolicus
A6]
gi|219861758|gb|ACL42099.1| type II secretion system protein E [Arthrobacter chlorophenolicus
A6]
Length = 409
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 74 IELGRLLALLPEEMRIRVSE---HPELYELIEVVMDLGRKPLARFPSGDFSLS---DCQI 127
+ L RL AL+ +RVS+ HP KP+ R SG+ + D
Sbjct: 43 VPLARLHALIDSCGEMRVSDMHIHPG-------------KPVRRVRSGNLVMDQGPDGIF 89
Query: 128 TVHHIEHATSQVGDF---AVDNRAGISRTL----HRISAIRNRKGAIIGLTCRVGRAVSG 180
T IE + D ++ R +S + +R+ + A + +T R+ V
Sbjct: 90 TAEDIEAWLIEATDGRPNPLEPRGHVSVAMATDNYRVRGTFRKSHAGVTVTFRLIPNVIP 149
Query: 181 SAN------LLQDLVQDGASLLFI-GPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
AN ++QDL+ + L+ + GP G GKTT I + +++ Y K + +V+ +E
Sbjct: 150 EANEVGVPQIIQDLMHRDSGLIILEGPTGSGKTTAIAALIKMVNRHYNKHIYMVEDPTE- 208
Query: 234 GGNGDIPHPGIGNAR--RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTI 291
H IG + Q+ + + + IE P +IVI E+ A AA
Sbjct: 209 -----FVHEEIGATSIIQRQIGSHALDYPTAIEDALRSKPNIIVIGELLNPATAKAALHA 263
Query: 292 AQRGIQLVATAHGVTIENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTF 351
A G ++ TAH +I +L+ IG DE+A R R S
Sbjct: 264 ATTGHLVITTAHAGSIAE-----ALDSFIGQFN----ADEQAQVR-------SRLSQSLL 307
Query: 352 SCAVE-IVSKTELRVHHSLEATVDAILSG---RIPNVEIRRMQHDGSKETVEKEFF 403
+ V+ +V + R+ + E V+ R + + R Q DG K+ E+ F
Sbjct: 308 AIMVQKLVPAVDGRLQAAREVLVNNTNFSELIRKDSSHLIRAQIDGDKQAGERRSF 363
>gi|395844616|ref|XP_003795054.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Otolemur
garnettii]
Length = 943
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 500 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 549
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 550 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 591
>gi|377831866|ref|ZP_09814831.1| type II secretion system protein E [Lactobacillus mucosae LM1]
gi|377554244|gb|EHT15958.1| type II secretion system protein E [Lactobacillus mucosae LM1]
Length = 210
Score = 42.0 bits (97), Expect = 1.2, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQ + +LF GP G GKTT + +AR + + VM ++ EI I
Sbjct: 10 LQQTAKKRGLMLFAGPMGSGKTTTMYHLARQFVD--QCVVMTIEDPVEITEPMFI----- 62
Query: 245 GNARRMQVPN-SEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
++QV +EM ++ L++ H PQ+ +I EI A A A G ++AT H
Sbjct: 63 ----QLQVNELAEMGYQQLLKVGLRHRPQIFIIGEIRDPQTAQMAVQAALSGHLVMATVH 118
Query: 304 G 304
Sbjct: 119 A 119
>gi|385332031|ref|YP_005885982.1| type IV-A pilus assembly ATPase PilB [Marinobacter adhaerens HP15]
gi|311695181|gb|ADP98054.1| type IV-A pilus assembly ATPase PilB [Marinobacter adhaerens HP15]
Length = 760
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 138 QVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVS----GSANLL----QDLV 189
Q+GD A D R +LH + A+I L + GRA++ G ++++ Q L+
Sbjct: 441 QLGDMAYDLRIQTQPSLHG-------EHAVIRLLPQTGRAMTIAELGMSSMIGARYQRLL 493
Query: 190 QDGASL-LFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
+ A L L +GP G GK+T + + LA+D +++V+ V+ E I N +
Sbjct: 494 DNPAGLVLVVGPTGSGKSTTLYAGLQTLADDGRRKVITVEDPIEY---------SIDNIQ 544
Query: 249 RMQVPNSEMQHKV--LIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 303
+ +V SE+ + A P VI++ EI + A+ A +Q G +++T H
Sbjct: 545 QTRV-RSEIGFGFADAMRAFVREDPDVILVGEIRDQETALEAIRASQTGHVVLSTLH 600
>gi|426386753|ref|XP_004059845.1| PREDICTED: lon protease homolog, mitochondrial [Gorilla gorilla
gorilla]
Length = 959
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|387543080|gb|AFJ72167.1| lon protease homolog, mitochondrial precursor [Macaca mulatta]
Length = 961
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|417861357|ref|ZP_12506412.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|338821761|gb|EGP55730.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
tumefaciens F2]
Length = 874
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 113 ARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNR-AGISRTLHRISAIRNRKGAIIG-- 169
AR SG S+ +T +I H S+ VD G L R+ + +++G
Sbjct: 519 ARDSSGAASMVQEVVTADNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAK--SVVGQG 576
Query: 170 -LTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
V RAV S LQD + S +F+GP GVGKT + + +AR L +D + M+
Sbjct: 577 EAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDD--ETAMVRL 634
Query: 229 TSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
SE + AR + P + ++ L EAV QV++ DEI
Sbjct: 635 DMSEYMEKHSV-------ARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEI 681
>gi|254780877|ref|YP_003065290.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040554|gb|ACT57350.1| ATP-dependent Clp protease, ATP-binding subunit protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 853
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQD + S +F+GP GVGKT +++ +AR+L +D + I D S + +
Sbjct: 591 LQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRI-DMSEYMEKH-------- 641
Query: 245 GNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+R + P + ++ L EAV H QV++ DEI
Sbjct: 642 SVSRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEI 679
>gi|355699582|gb|AES01177.1| lon peptidase 1, mitochondrial [Mustela putorius furo]
Length = 813
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 420 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 469
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M KV+ ++ + P +++ +D+IG + +S +
Sbjct: 470 V--GAMPGKVIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 511
>gi|119589558|gb|EAW69152.1| protease, serine, 15, isoform CRA_b [Homo sapiens]
Length = 950
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 507 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 556
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 557 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 598
>gi|395844614|ref|XP_003795053.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Otolemur
garnettii]
Length = 959
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|301618395|ref|XP_002938599.1| PREDICTED: lon protease homolog, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 970
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 539 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 588
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIVIDEI 279
V M K++ ++ + P +I+IDE+
Sbjct: 589 V--GAMPGKIIQCLKKTKTENP-LILIDEV 615
>gi|21396489|ref|NP_004784.2| lon protease homolog, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|12644239|sp|P36776.2|LONM_HUMAN RecName: Full=Lon protease homolog, mitochondrial; AltName:
Full=LONHs; AltName: Full=Lon protease-like protein;
Short=LONP; AltName: Full=Mitochondrial ATP-dependent
protease Lon; AltName: Full=Serine protease 15; Flags:
Precursor
gi|4580549|gb|AAD24414.1|AF059309_1 LON protease [Homo sapiens]
gi|12652953|gb|AAH00235.1| Lon peptidase 1, mitochondrial [Homo sapiens]
gi|119589557|gb|EAW69151.1| protease, serine, 15, isoform CRA_a [Homo sapiens]
gi|119589560|gb|EAW69154.1| protease, serine, 15, isoform CRA_a [Homo sapiens]
gi|123989499|gb|ABM83881.1| protease, serine, 15 [synthetic construct]
gi|123999245|gb|ABM87201.1| protease, serine, 15 [synthetic construct]
gi|311346898|gb|ADP90374.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346900|gb|ADP90375.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346902|gb|ADP90376.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346904|gb|ADP90377.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346906|gb|ADP90378.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346908|gb|ADP90379.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346910|gb|ADP90380.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346912|gb|ADP90381.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346914|gb|ADP90382.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346916|gb|ADP90383.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346918|gb|ADP90384.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346920|gb|ADP90385.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346922|gb|ADP90386.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346926|gb|ADP90388.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346928|gb|ADP90389.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346930|gb|ADP90390.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346932|gb|ADP90391.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346934|gb|ADP90392.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346936|gb|ADP90393.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346938|gb|ADP90394.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346942|gb|ADP90396.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346944|gb|ADP90397.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346946|gb|ADP90398.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346948|gb|ADP90399.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346950|gb|ADP90400.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346952|gb|ADP90401.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346954|gb|ADP90402.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346956|gb|ADP90403.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346958|gb|ADP90404.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346960|gb|ADP90405.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346962|gb|ADP90406.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346964|gb|ADP90407.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346966|gb|ADP90408.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346968|gb|ADP90409.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346970|gb|ADP90410.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346972|gb|ADP90411.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346974|gb|ADP90412.1| mitochondrial lon protease-like protein [Homo sapiens]
gi|311346976|gb|ADP90413.1| mitochondrial lon protease-like protein [Homo sapiens]
Length = 959
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|418004732|ref|ZP_12644744.1| late competence protein ComGA [Lactobacillus casei UW1]
gi|410548830|gb|EKQ23015.1| late competence protein ComGA [Lactobacillus casei UW1]
Length = 288
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL------ 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|395788767|ref|ZP_10468308.1| chaperone ClpB [Bartonella taylorii 8TBB]
gi|395431837|gb|EJF97844.1| chaperone ClpB [Bartonella taylorii 8TBB]
Length = 869
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S +F+GP GVGKT + + +A L D ++ +D S +
Sbjct: 580 VSRAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAAFLFQDSNA-MLRIDMSEYM 638
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
H G AR + P + ++ VL EAV QVI+ DEI
Sbjct: 639 E-----KHAG---ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEI 679
>gi|358458972|ref|ZP_09169176.1| AAA ATPase central domain protein [Frankia sp. CN3]
gi|357077781|gb|EHI87236.1| AAA ATPase central domain protein [Frankia sp. CN3]
Length = 650
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 195 LLFIGPPGVGKTTIIREIARVLAN-DYKKRVMIVDTSSE--IGGNGDIPHPGIGNARRMQ 251
L+F GPPG GKTT+ R AR+LA +R + V+ SS+ +G H G G R
Sbjct: 54 LVFAGPPGTGKTTVARIFARLLAEMGVVQRAVPVEVSSDSLVG-----EHAGSGTRR--- 105
Query: 252 VPNSEMQHKVLIEAVENHMPQVIVIDEI 279
L+EA E V+ +DEI
Sbjct: 106 ----------LVEAFEKAQGGVLFLDEI 123
>gi|311346940|gb|ADP90395.1| mitochondrial lon protease-like protein [Homo sapiens]
Length = 959
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|321466015|gb|EFX77013.1| hypothetical protein DAPPUDRAFT_306039 [Daphnia pulex]
Length = 869
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IA+ L +Y + +GG D+ I RR
Sbjct: 414 GKILCFYGPPGVGKTSIARSIAKALNREYFR--------FSVGGMTDVAE--IKGHRRTY 463
Query: 252 VPNSEMQHKVLIEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V + ++ + P V++ +D+IG + AS +
Sbjct: 464 VGAMPGKMIQCLKKTKTENPLVLIDEVDKIGKGYQGDPASAL 505
>gi|313231514|emb|CBY08628.1| unnamed protein product [Oikopleura dioica]
Length = 1239
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
VQ +LF GPPG GKT + R +A + D KK + S++
Sbjct: 270 VQPPRGVLFYGPPGTGKTLMARALANECSQDGKKLAFFMRKGSDVLSKW----------- 318
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
V SE Q ++L + P +I DEI
Sbjct: 319 ---VGESERQLRLLFDQAYRMRPSIIFFDEI 346
>gi|385816288|ref|YP_005852679.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126325|gb|ADY85655.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 458
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---DTSSEIGGNGDIPHPGIGNAR 248
G+ +L G PG+GK+T++ +I LA YK V+ V +++S+I D G+G +
Sbjct: 93 GSLVLIGGDPGIGKSTLMLQIMSELAEKYK--VLYVSGEESASQIKLRAD--RLGLGQSP 148
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLEAMAAS 289
+ P S M+H + + +++ P +VID I T L++M S
Sbjct: 149 MLLYPESNMEH--IRDQIDDVKPDFVVIDSIQTMNEPSLDSMVGS 191
>gi|311346924|gb|ADP90387.1| mitochondrial lon protease-like protein [Homo sapiens]
Length = 959
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|289743537|gb|ADD20516.1| replication factor C subunit RFC2 [Glossina morsitans morsitans]
Length = 333
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D +K+ V+ ++ S+E G D+ I +
Sbjct: 51 NAPNIIIAGPPGVGKTTTIQCLARILLGDSFKEAVLELNASNERG--IDVVRNKIKMFAQ 108
Query: 250 MQVPNSEMQHKVLI 263
+V + +HK++I
Sbjct: 109 QKVTLPKGRHKIVI 122
>gi|191637964|ref|YP_001987130.1| Competence protein [Lactobacillus casei BL23]
gi|301066048|ref|YP_003788071.1| type II secretory pathway/competence component, AtPase
[Lactobacillus casei str. Zhang]
gi|385819713|ref|YP_005856100.1| General secretory pathway protein E [Lactobacillus casei LC2W]
gi|385822867|ref|YP_005859209.1| General secretory pathway protein E [Lactobacillus casei BD-II]
gi|409996826|ref|YP_006751227.1| type IV pilus assembly protein TapB [Lactobacillus casei W56]
gi|417983100|ref|ZP_12623742.1| ComGA family late competence protein [Lactobacillus casei 21/1]
gi|417986309|ref|ZP_12626881.1| ComGA family late competence protein [Lactobacillus casei 32G]
gi|417989244|ref|ZP_12629755.1| late competence protein ComGA [Lactobacillus casei A2-362]
gi|417995802|ref|ZP_12636089.1| late competence protein ComGA [Lactobacillus casei M36]
gi|417998738|ref|ZP_12638953.1| late competence protein ComGA [Lactobacillus casei T71499]
gi|418010436|ref|ZP_12650213.1| late competence protein ComGA [Lactobacillus casei Lc-10]
gi|418013395|ref|ZP_12653039.1| late competence protein ComGA [Lactobacillus casei Lpc-37]
gi|190712266|emb|CAQ66272.1| Competence protein [Lactobacillus casei BL23]
gi|300438455|gb|ADK18221.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus casei str. Zhang]
gi|327382040|gb|AEA53516.1| General secretory pathway protein E [Lactobacillus casei LC2W]
gi|327385194|gb|AEA56668.1| General secretory pathway protein E [Lactobacillus casei BD-II]
gi|406357838|emb|CCK22108.1| Type IV pilus assembly protein TapB [Lactobacillus casei W56]
gi|410526502|gb|EKQ01389.1| ComGA family late competence protein [Lactobacillus casei 32G]
gi|410528881|gb|EKQ03719.1| ComGA family late competence protein [Lactobacillus casei 21/1]
gi|410536506|gb|EKQ11099.1| late competence protein ComGA [Lactobacillus casei M36]
gi|410538968|gb|EKQ13509.1| late competence protein ComGA [Lactobacillus casei A2-362]
gi|410540342|gb|EKQ14857.1| late competence protein ComGA [Lactobacillus casei T71499]
gi|410553925|gb|EKQ27913.1| late competence protein ComGA [Lactobacillus casei Lc-10]
gi|410555921|gb|EKQ29852.1| late competence protein ComGA [Lactobacillus casei Lpc-37]
Length = 288
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL------ 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|449491498|ref|XP_002189153.2| PREDICTED: lon protease homolog, mitochondrial [Taeniopygia
guttata]
Length = 837
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 401 GKILCFYGPPGVGKTSIARSIARALNREY 429
>gi|427779555|gb|JAA55229.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
Length = 990
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 565 GKILCFYGPPGVGKTSIARSIARALNREY 593
>gi|390478417|ref|XP_002761658.2| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog, mitochondrial
isoform 1 [Callithrix jacchus]
Length = 963
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 519 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 568
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 569 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 610
>gi|313243707|emb|CBY42347.1| unnamed protein product [Oikopleura dioica]
Length = 185
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 145 DNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSANL--LQDLVQDGASLLFIGPPG 202
D + I TLH IS + G ++ LT +V + L +DL+ +L
Sbjct: 42 DGQYYIDGTLHEISLLE--IGKVVALTVQVVLPKVDPSQLKKAEDLIATKKAL-----KT 94
Query: 203 VGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHKVL 262
+ R + R+L+ D V ++D + I G+G I H +G+ R V N + + L
Sbjct: 95 IDDENFCRNVCRLLSEDESLSVFVLDLNGRICGHGAIAHWSVGDVRMFPVKNPDDLNSHL 154
Query: 263 IEAVENHMPQVIV 275
+ V H P VI+
Sbjct: 155 -QNVLKHHPDVII 166
>gi|195135525|ref|XP_002012183.1| GI16571 [Drosophila mojavensis]
gi|193918447|gb|EDW17314.1| GI16571 [Drosophila mojavensis]
Length = 331
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK V+ ++ S+E G D+ I +
Sbjct: 48 NSPNIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|409041157|gb|EKM50643.1| hypothetical protein PHACADRAFT_152803 [Phanerochaete carnosa
HHB-10118-sp]
Length = 358
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ DY+K+++ ++ S + G
Sbjct: 76 LLFYGPPGTGKTSTILAVARRIYGKDYRKQILELNASDDRG 116
>gi|402903860|ref|XP_003914773.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Papio
anubis]
Length = 948
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 500 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 549
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 550 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 591
>gi|349701514|ref|ZP_08903143.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
18494]
Length = 779
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A+ ++ V RA +G LQD + S LF+GP GVGKT + + +AR L +D +K ++
Sbjct: 492 ALKAVSNAVRRARAG----LQDPNRPIGSFLFLGPTGVGKTELCKALARFLFDD-EKALL 546
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+D S + + AR + P + ++ VL EAV QVI+ DE+
Sbjct: 547 RIDMSEFMEKH--------AVARLVGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 595
>gi|344306118|ref|XP_003421736.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog,
mitochondrial-like [Loxodonta africana]
Length = 930
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 608
>gi|104774499|ref|YP_619479.1| DNA repair protein RadA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514611|ref|YP_813517.1| DNA repair protein RadA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|418028733|ref|ZP_12667285.1| hypothetical protein LDBUL1632_00079 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418035016|ref|ZP_12673478.1| hypothetical protein LDBUL1519_00178 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103423580|emb|CAI98508.1| Putative ATP-dependent serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093926|gb|ABJ59079.1| DNA replication and repair protein RadA [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|354691403|gb|EHE91333.1| hypothetical protein LDBUL1519_00178 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354691416|gb|EHE91344.1| hypothetical protein LDBUL1632_00079 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 458
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV---DTSSEIGGNGDIPHPGIGNAR 248
G+ +L G PG+GK+T++ +I LA YK V+ V +++S+I D G+G +
Sbjct: 93 GSLVLIGGDPGIGKSTLMLQIMSELAEKYK--VLYVSGEESASQIKLRAD--RLGLGQSP 148
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGT----KLEAMAAS 289
+ P S M+H + + +++ P +VID I T L++M S
Sbjct: 149 MLLYPESNMEH--IRDQIDDVKPDFVVIDSIQTMNEPSLDSMVGS 191
>gi|410222436|gb|JAA08437.1| lon peptidase 1, mitochondrial [Pan troglodytes]
gi|410257268|gb|JAA16601.1| lon peptidase 1, mitochondrial [Pan troglodytes]
gi|410351911|gb|JAA42559.1| lon peptidase 1, mitochondrial [Pan troglodytes]
Length = 959
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|418069493|ref|ZP_12706770.1| Type II secretory pathway/competence component, ATPase [Pediococcus
acidilactici MA18/5M]
gi|357536024|gb|EHJ20055.1| Type II secretory pathway/competence component, ATPase [Pediococcus
acidilactici MA18/5M]
Length = 320
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQV-P 253
++F GP G GKTT+I EIA+ L+ K VM ++ EI N N ++QV
Sbjct: 137 IVFSGPTGSGKTTLIYEIAKKLSGS--KLVMSIEDPVEIQEN---------NFLQLQVNE 185
Query: 254 NSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENL 310
S M ++ L+++ + P + +I EI A A A G ++ T H + E +
Sbjct: 186 KSGMTYQALLKSGLRNRPDIFIIGEIRDSKTAEIAVQAALSGHLVLTTLHCKSTEGV 242
>gi|258542820|ref|YP_003188253.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|384042741|ref|YP_005481485.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|384051258|ref|YP_005478321.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|384054366|ref|YP_005487460.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|384057600|ref|YP_005490267.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|384060241|ref|YP_005499369.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|384063533|ref|YP_005484175.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|384119543|ref|YP_005502167.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421849531|ref|ZP_16282510.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|421852887|ref|ZP_16285570.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256633898|dbj|BAH99873.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|256636957|dbj|BAI02926.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|256640010|dbj|BAI05972.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|256643066|dbj|BAI09021.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|256646121|dbj|BAI12069.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|256649174|dbj|BAI15115.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|256652161|dbj|BAI18095.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655218|dbj|BAI21145.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|371459718|dbj|GAB27713.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|371478886|dbj|GAB30773.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 871
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
A+ ++ V RA +G LQD + S LF+GP GVGKT + + +AR L +D K ++
Sbjct: 580 ALKAVSNAVRRARAG----LQDPNRPIGSFLFLGPTGVGKTELTKALARFLFDD-DKALL 634
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+D S + + AR + P + ++ VL EAV QVI+ DE+
Sbjct: 635 RIDMSEFMEKH--------AVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 683
>gi|195375032|ref|XP_002046307.1| GJ12823 [Drosophila virilis]
gi|194153465|gb|EDW68649.1| GJ12823 [Drosophila virilis]
Length = 331
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK V+ ++ S+E G D+ I +
Sbjct: 48 NSPNIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|417413065|gb|JAA52879.1| Putative lon protease log mitochondrial, partial [Desmodus
rotundus]
Length = 900
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 458 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 507
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 508 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 549
>gi|170589810|ref|XP_001899666.1| Putative activator 1 36 kDa subunit [Brugia malayi]
gi|158592792|gb|EDP31388.1| Putative activator 1 36 kDa subunit, putative [Brugia malayi]
Length = 347
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LLF GPPG GKT+ I AR+L + M++ E+ + D GIG R Q+ N
Sbjct: 51 LLFYGPPGTGKTSTILAAARMLYTSKQLSSMVL----ELNASDD---RGIGIVRE-QIIN 102
Query: 255 SEMQHKVLIEAVENHMPQVIVIDE 278
+ ++ ++ +P++I++DE
Sbjct: 103 FAQTSTLNVDKNQSSVPKLIILDE 126
>gi|114674808|ref|XP_001143873.1| PREDICTED: lon protease homolog, mitochondrial isoform 3 [Pan
troglodytes]
Length = 959
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIHEVDKIGRGYQGDPSSAL 607
>gi|114674816|ref|XP_001143707.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Pan
troglodytes]
Length = 763
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|427780105|gb|JAA55504.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
gi|427788559|gb|JAA59731.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
Length = 1019
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 586 GKILCFYGPPGVGKTSIARSIARALNREY 614
>gi|440874|gb|AAA61616.1| hLON ATP-dependent protease [Homo sapiens]
Length = 962
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 519 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVTE--IKGHRRTY 568
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 569 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 610
>gi|73987072|ref|XP_854391.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Canis
lupus familiaris]
Length = 960
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 608
>gi|429100|emb|CAA53625.1| Lon protease-like protein [Homo sapiens]
gi|741362|prf||2007252A ATP-dependent lon protease
Length = 937
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 494 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 543
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 544 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 585
>gi|363743617|ref|XP_001232112.2| PREDICTED: lon protease homolog, mitochondrial [Gallus gallus]
Length = 843
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 407 GKILCFYGPPGVGKTSIARSIARALNREY 435
>gi|451327636|ref|NP_001263409.1| lon protease homolog, mitochondrial isoform 3 [Homo sapiens]
Length = 763
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|397497085|ref|XP_003819347.1| PREDICTED: lon protease homolog, mitochondrial isoform 4 [Pan
paniscus]
Length = 763
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|397497081|ref|XP_003819345.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Pan
paniscus]
Length = 893
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 450 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 499
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 500 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 541
>gi|312874440|ref|ZP_07734470.1| putative ComG operon protein 1 [Lactobacillus iners LEAF 2052A-d]
gi|311090052|gb|EFQ48466.1| putative ComG operon protein 1 [Lactobacillus iners LEAF 2052A-d]
Length = 324
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 25/238 (10%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAI---RNRKGAIIGLTCRVGRA---VSGSANLLQ 186
EH QVG F +N R S++ NR+ +I L +G L+
Sbjct: 69 EHRRPQVGSFIKENNG--KNVFLRFSSVGDFLNRESIVIRLIYDIGDCHYFFPEQFEKLK 126
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGN 246
L + ++ GP G GKTT + ++ + ++++ K VM ++ EI D I N
Sbjct: 127 QLSKKRGMIVTSGPTGSGKTTTMYQLIKQISSE--KFVMTIEDPIEIL-EPDFLQTQINN 183
Query: 247 ARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVT 306
+ + + L++A H P ++VI EI A A A G ++ T H +
Sbjct: 184 -------QAGIDYLSLLKAALRHRPDILVIGEIRDAQTAKVAINAALSGHLVLTTIHAKS 236
Query: 307 IENLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLERKGPSTFSCAVEIVSKTELR 364
+I + +G + + + E + L +TFSC ++I T+ R
Sbjct: 237 TYQII-----DRFLG--LGIKMPELENALTAISYQRLLPTVKNTFSCLLDIADATKWR 287
>gi|193785434|dbj|BAG54587.1| unnamed protein product [Homo sapiens]
Length = 923
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 480 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 529
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 530 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 571
>gi|160872790|ref|ZP_02062922.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159121589|gb|EDP46927.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 320
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 160 IRNRKGAIIGL--TCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREI-ARVL 216
IR R + L GRA +L+DL+Q ++L G PG GKTT+I + A +
Sbjct: 114 IRKRSDVVFTLDDYLNTGRANKKHNAILRDLIQKRKNILIAGGPGSGKTTLINALTAEAV 173
Query: 217 ANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ-VPNSEMQHKVLIEAVENHMPQVIV 275
+ K+R++I++ D+P ++ ++ + +S + L+ P I+
Sbjct: 174 RQEGKQRLLILE---------DLPELQCASSNKVALLTSSTVTMTALVRMAMRMRPDRIL 224
Query: 276 IDEI--GTKLEAMAA-------------STIAQRGIQLVATAHGVTIENLIMNPSLEMLI 320
I E+ L+ + A + AQ IQ + + +EN + P L+++
Sbjct: 225 IGEVRGAEALDMLKAWNTGCPGGFCTVHANSAQEAIQRILD---LAMENKLTTPPLQLVA 281
Query: 321 GGVQNVTLGDEEAHRRG 337
+ V + H++G
Sbjct: 282 QTIDAVIFIHRKGHQKG 298
>gi|432102016|gb|ELK29836.1| Lon protease like protein, mitochondrial [Myotis davidii]
Length = 843
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 401 GKILCFYGPPGVGKTSIARSIARALNREY 429
>gi|313245577|emb|CBY40264.1| unnamed protein product [Oikopleura dioica]
Length = 1210
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNAR 248
VQ +LF GPPG GKT + R +A + D KK + S++
Sbjct: 241 VQPPRGVLFYGPPGTGKTLMARALANECSQDGKKLAFFMRKGSDVLSKW----------- 289
Query: 249 RMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
V SE Q ++L + P +I DEI
Sbjct: 290 ---VGESERQLRLLFDQAYRMRPSIIFFDEI 317
>gi|193786407|dbj|BAG51690.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|293571350|ref|ZP_06682381.1| ComG operon protein 1 [Enterococcus faecium E980]
gi|430840355|ref|ZP_19458280.1| competence protein ComGA [Enterococcus faecium E1007]
gi|431064188|ref|ZP_19493535.1| competence protein ComGA [Enterococcus faecium E1604]
gi|431124699|ref|ZP_19498695.1| competence protein ComGA [Enterococcus faecium E1613]
gi|431738647|ref|ZP_19527590.1| competence protein ComGA [Enterococcus faecium E1972]
gi|431741426|ref|ZP_19530331.1| competence protein ComGA [Enterococcus faecium E2039]
gi|291608566|gb|EFF37857.1| ComG operon protein 1 [Enterococcus faecium E980]
gi|430495120|gb|ELA71327.1| competence protein ComGA [Enterococcus faecium E1007]
gi|430566984|gb|ELB06072.1| competence protein ComGA [Enterococcus faecium E1613]
gi|430568829|gb|ELB07859.1| competence protein ComGA [Enterococcus faecium E1604]
gi|430597375|gb|ELB35178.1| competence protein ComGA [Enterococcus faecium E1972]
gi|430601604|gb|ELB39198.1| competence protein ComGA [Enterococcus faecium E2039]
Length = 309
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 65 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHRC 118
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
+ +LQ + G LF GP G GKT+++ LA K++V
Sbjct: 119 FNSLDF-----------ETILQKTFRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 162
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 163 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 213
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 214 TAHAAVRAALTGHRVFATVHARNLEGTLIR 243
>gi|193788396|dbj|BAG53290.1| unnamed protein product [Homo sapiens]
Length = 845
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 451
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 452 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 493
>gi|116494526|ref|YP_806260.1| type II secretory pathway/competence component, ATPase
[Lactobacillus casei ATCC 334]
gi|116104676|gb|ABJ69818.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus casei ATCC 334]
Length = 288
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 133 EHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVSGSAN-------LL 185
EH Q+G F A R+S++ + +G L R+ + + +A LL
Sbjct: 66 EHRRVQLGAFYQKESAA----FLRLSSVADFRGGE-SLVVRIIKGIPDAAGARHLLDRLL 120
Query: 186 QDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIG 245
L+Q L GP G GKTT++ ++A LA + V+ ++ EI +
Sbjct: 121 GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAES--RMVLSIEDPVEINQPQFL------ 172
Query: 246 NARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHG 304
++QV P ++M + L++A H P V++I EI + A +A A G ++AT H
Sbjct: 173 ---QLQVNPEADMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHA 229
>gi|410950123|ref|XP_003981761.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog, mitochondrial
[Felis catus]
Length = 960
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 566
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 567 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 608
>gi|395512891|ref|XP_003760667.1| PREDICTED: lon protease homolog, mitochondrial [Sarcophilus
harrisii]
Length = 894
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 458 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 507
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P +++ +D+IG + +S + +
Sbjct: 508 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLE 551
>gi|157113438|ref|XP_001657828.1| ATP-dependent Lon protease, putative [Aedes aegypti]
gi|108877715|gb|EAT41940.1| AAEL006474-PA [Aedes aegypti]
Length = 956
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 521 GKILCFYGPPGVGKTSIARSIARALNREY 549
>gi|86741527|ref|YP_481927.1| ATPase AAA [Frankia sp. CcI3]
gi|86568389|gb|ABD12198.1| AAA_5 ATPase associated with various cellular activities [Frankia
sp. CcI3]
Length = 741
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 187 DLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIV 227
+L++D L+F GPPG GKT + R +A LA+D ++ V +V
Sbjct: 445 ELLRDRPQLIFYGPPGTGKTYLARRLAWHLADDRRENVTLV 485
>gi|414046|emb|CAA52291.1| Lon protease-like protein [Homo sapiens]
Length = 845
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 451
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P +++ +D+IG + +S + +
Sbjct: 452 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLE 495
>gi|257899558|ref|ZP_05679211.1| type II/IV secretion system protein [Enterococcus faecium Com15]
gi|257837470|gb|EEV62544.1| type II/IV secretion system protein [Enterococcus faecium Com15]
Length = 317
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 105 MDLGRKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRK 164
MD+G K A+ + +SL ++ + S VGD+ + + + R L+ IS +R
Sbjct: 73 MDIGEKRKAQLGALTYSLEKQKVRLR-----LSSVGDY-LQRESLVIRLLYGISETPHRC 126
Query: 165 GAIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
+ +LQ + G LF GP G GKT+++ LA K++V
Sbjct: 127 FNSLDF-----------ETILQKTFRRGL-YLFSGPVGSGKTSLMYR----LALKEKRQV 170
Query: 225 MIVDTSSEIGGNGDIPHPGIGNARRMQV-PNSEMQHKVLIEAVENHMPQVIVIDEIGTKL 283
+ ++ EI P ++Q+ P + L++ H P +++I EI +
Sbjct: 171 ITIEDPVEI------EEPFF---LQLQINPKIAQTYDTLLKLALRHRPDLLIIGEIRDES 221
Query: 284 EAMAASTIAQRGIQLVATAHGVTIENLIMN 313
A AA A G ++ AT H +E ++
Sbjct: 222 TAHAAVRAALTGHRVFATVHARNLEGTLIR 251
>gi|410697436|gb|AFV76504.1| ATP-dependent protease La [Thermus oshimai JL-2]
Length = 806
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 189 VQDGASLLFIGPPGVGKTTIIREIARVLANDY 220
V G LLF+GPPGVGKT+I + IA L Y
Sbjct: 352 VNKGPILLFVGPPGVGKTSIAKSIAEALGRRY 383
>gi|330718414|ref|ZP_08313014.1| hypothetical protein LfalK3_03223 [Leuconostoc fallax KCTC 3537]
Length = 263
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 195 LLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQVPN 254
LF GP G GKTT + + L+ +K V+ ++ EI + N ++QV
Sbjct: 72 FLFSGPTGSGKTTTMYRLLTCLS--LEKTVLTIEDPVEIQQS---------NFVQLQVNE 120
Query: 255 SE-MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMN 313
+ M + LI+ H P+V++I EI K A AA A G +V+T H ++ + +M
Sbjct: 121 TAGMYYDDLIKVALRHRPEVLLIGEIRDKETAEAAIKAALSGHLVVSTIHALSARD-VMT 179
Query: 314 PSLEMLIGGVQN 325
L++ GVQ
Sbjct: 180 RLLDL---GVQK 188
>gi|121602872|ref|YP_988552.1| chaperone ClpB [Bartonella bacilliformis KC583]
gi|421760360|ref|ZP_16197179.1| chaperone ClpB [Bartonella bacilliformis INS]
gi|120615049|gb|ABM45650.1| chaperone ClpB [Bartonella bacilliformis KC583]
gi|411176077|gb|EKS46098.1| chaperone ClpB [Bartonella bacilliformis INS]
Length = 866
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 185 LQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGI 244
LQD + S +F+GP GVGKT + + +A L D+K ++ +D S + H G
Sbjct: 591 LQDPNRPIGSFMFLGPTGVGKTELTKALATFLFQDHKA-MLRIDMSEYME-----KHAG- 643
Query: 245 GNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
AR + P + ++ VL EAV QVI+ DEI
Sbjct: 644 --ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEI 679
>gi|397497079|ref|XP_003819344.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Pan
paniscus]
gi|397497083|ref|XP_003819346.1| PREDICTED: lon protease homolog, mitochondrial isoform 3 [Pan
paniscus]
Length = 845
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 451
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTIAQ 293
V M K++ ++ + P +++ +D+IG + +S + +
Sbjct: 452 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLE 495
>gi|389738135|gb|EIM79339.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 738
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 196 LFIGPPGVGKTTIIREIA-RVLAND-----YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ IGPPGVGKT I+ +A R+++ + + KRV+ +D S+ + G+G R
Sbjct: 53 VLIGPPGVGKTAILEGLATRIVSKEVPESLHNKRVLSIDLSAIMAGSG----------IR 102
Query: 250 MQVPNSEMQHKVLIEAVENHMPQVIV-IDEIGTKLEAMAASTIAQRGIQLVATAHGVTIE 308
Q E + K LI+ +E+ VI IDE+ T + A G
Sbjct: 103 GQF---EEKFKALIKDIEDEAGSVICFIDEVHTLFN--------------LGKAEGSIDA 145
Query: 309 NLIMNPSLEMLIGGVQNVTLGDEEAHRRGVQK-TVLERK------GPSTFSCAVEIVS-- 359
++ P+L G+Q V + +R+ + K LER+ T + I+
Sbjct: 146 GQMIKPALAR---GLQLVGATTPDEYRKTIGKDAALERRFQPVSIDEPTVESTISILRGL 202
Query: 360 KTELRVHHSLEATVDAILSGRI 381
K VHH +E + A+++ +
Sbjct: 203 KARYEVHHGVEISDGALVTAAV 224
>gi|134035410|sp|Q4UN57.2|CLPB_RICFE RecName: Full=Chaperone protein ClpB
Length = 858
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
AI G++ V R+ +G +QD+ + S LF+GP GVGKT + + +A L +D + ++
Sbjct: 575 AIKGVSDAVRRSRAG----IQDINRPLGSFLFLGPTGVGKTELTKALASFLFDD-RNAIL 629
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM---QHKVLIEAVENHMPQVIVIDEI 279
+D S + + +R + P + Q VL EAV QVI+ DE+
Sbjct: 630 RIDMSEYMEKH--------AISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEV 678
>gi|451327634|ref|NP_001263408.1| lon protease homolog, mitochondrial isoform 2 [Homo sapiens]
gi|21756162|dbj|BAC04829.1| unnamed protein product [Homo sapiens]
Length = 895
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 452 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 501
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 502 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 543
>gi|385826177|ref|YP_005862519.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329667621|gb|AEB93569.1| hypothetical protein LJP_1247c [Lactobacillus johnsonii DPC 6026]
Length = 322
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 183 NLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHP 242
NLL+ L ++ GP G GKT+ + E+A+V+ + K VM ++ E+ N D
Sbjct: 118 NLLKKLTNQRGLIVTSGPTGSGKTSTMYELAQVIGRN--KVVMTIEDPVEV-WNPDFLQT 174
Query: 243 GIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATA 302
+ + P+ L++A H P +++I EI + A + A G ++AT
Sbjct: 175 QVNLIAGITYPD-------LLKAALRHRPDILIIGEIRDQETAKVSINAALSGHLVLATI 227
Query: 303 HGVT 306
H T
Sbjct: 228 HAKT 231
>gi|167838292|ref|ZP_02465151.1| flagellar biosynthesis regulator FlhF [Burkholderia thailandensis
MSMB43]
Length = 459
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 218 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 277
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + + +Q+ +E+ +H VLI+ + V D+I A T QR
Sbjct: 278 LGVPVHAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAM---LHGADTPVQR 334
Query: 295 GIQLVATAHGVTIENLIM---------NPSLEMLIGGVQNVTLGDEEAHRRGVQKTVLER 345
+ L AT+HG T+ ++ +L L G + +T DE ++ GV TV+
Sbjct: 335 LLLLNATSHGDTLNEVVQAYRSAAGQSEAALPDLAGCI--LTKLDEASNLGGVLDTVIRY 392
Query: 346 KGPSTF 351
K P +
Sbjct: 393 KLPVHY 398
>gi|83318181|gb|AAI09219.1| LONP1 protein [Homo sapiens]
Length = 848
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 405 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 454
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 455 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 496
>gi|195012119|ref|XP_001983484.1| GH15919 [Drosophila grimshawi]
gi|193896966|gb|EDV95832.1| GH15919 [Drosophila grimshawi]
Length = 331
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 191 DGASLLFIGPPGVGKTTIIREIARVLAND-YKKRVMIVDTSSEIGGNGDIPHPGIGNARR 249
+ +++ GPPGVGKTT I+ +AR+L D YK V+ ++ S+E G D+ I +
Sbjct: 48 NSPNIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQ 105
Query: 250 MQVPNSEMQHKVLI 263
+V +HK++I
Sbjct: 106 QKVTLPRGRHKIVI 119
>gi|397677499|ref|YP_006519037.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398188|gb|AFN57515.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 864
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S LF+GP GVGKT + + +A L +D + V I D S +
Sbjct: 581 VSRAVRRARAGLQDPSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRI-DMSEYM 639
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+ AR + P + ++ VL EAV QVI+ DE+
Sbjct: 640 EKH--------AVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 680
>gi|421468538|ref|ZP_15917071.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
multivorans ATCC BAA-247]
gi|400231710|gb|EJO61384.1| putative flagellar biosynthesis protein FlhF, partial [Burkholderia
multivorans ATCC BAA-247]
Length = 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 32/191 (16%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 117 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 176
Query: 239 --IPHPGIGNARRMQVPNSEM--QHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+ +H VLI+ + V D+I AST QR
Sbjct: 177 LGVPVHAVKDAGDLSLALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGASTPVQR 233
Query: 295 GIQLVATAHGVTIENLIM------------NPSLEM--LIGGVQNVTLGDEEAHRRGVQK 340
+ L AT+HG T+ ++ P L L G + +T DE H G
Sbjct: 234 LLLLNATSHGDTLNEVVQAYRSAGDRADLAGPDLAGPDLAGCI--LTKLDEATHLGGALD 291
Query: 341 TVLERKGPSTF 351
TV+ K P +
Sbjct: 292 TVIRYKLPVHY 302
>gi|348522734|ref|XP_003448879.1| PREDICTED: lon protease homolog, mitochondrial-like [Oreochromis
niloticus]
Length = 1002
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDY 220
G L F GPPGVGKT+I R IAR L +Y
Sbjct: 567 GKILCFYGPPGVGKTSIARSIARALNREY 595
>gi|402903858|ref|XP_003914772.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Papio
anubis]
Length = 964
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 192 GASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEIGGNGDIPHPGIGNARRMQ 251
G L F GPPGVGKT+I R IAR L +Y + +GG D+ I RR
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDVAE--IKGHRRTY 565
Query: 252 VPNSEMQHKVL--IEAVENHMPQVIV--IDEIGTKLEAMAASTI 291
V M K++ ++ + P +++ +D+IG + +S +
Sbjct: 566 V--GAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSAL 607
>gi|221214211|ref|ZP_03587183.1| flagellar biosynthetic protein FlhF [Burkholderia multivorans CGD1]
gi|221165866|gb|EED98340.1| flagellar biosynthetic protein FlhF [Burkholderia multivorans CGD1]
Length = 597
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIAR--VLANDYKKRVMIVDTSSEIGGNGD------- 238
L++ G +GP GVGKTT ++A V+ K ++ S IGG+
Sbjct: 346 LMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKI 405
Query: 239 --IPHPGIGNARRMQVPNSEMQHK--VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQR 294
+P + +A + + SE+++K VLI+ + V D+I AST QR
Sbjct: 406 LGVPVHAVKDAGDLSLALSELRNKHIVLIDTIGMSQRDRAVSDQIAM---LHGASTPVQR 462
Query: 295 GIQLVATAHGVTIENLI 311
+ L AT+HG T+ ++
Sbjct: 463 LLLLNATSHGDTLNEVV 479
>gi|56552320|ref|YP_163159.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|384412584|ref|YP_005621949.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|56543894|gb|AAV90048.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|335932958|gb|AEH63498.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 864
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S LF+GP GVGKT + + +A L +D + V I D S +
Sbjct: 581 VSRAVRRARAGLQDPSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRI-DMSEYM 639
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+ AR + P + ++ VL EAV QVI+ DE+
Sbjct: 640 EKH--------AVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 680
>gi|260753989|ref|YP_003226882.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553352|gb|ACV76298.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 864
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 174 VGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVDTSSEI 233
V RAV + LQD + S LF+GP GVGKT + + +A L +D + V I D S +
Sbjct: 581 VSRAVRRARAGLQDPSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRI-DMSEYM 639
Query: 234 GGNGDIPHPGIGNARRMQVPNSEMQHK---VLIEAVENHMPQVIVIDEI 279
+ AR + P + ++ VL EAV QVI+ DE+
Sbjct: 640 EKH--------AVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEV 680
>gi|225677467|gb|EEH15751.1| DNA repair and recombination protein pif1 [Paracoccidioides
brasiliensis Pb03]
Length = 798
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK 222
+VQDG S+ F G G GK+ ++REI R L YKK
Sbjct: 287 IVQDGKSIFFTGSAGTGKSVLMREIIRKLREKYKK 321
>gi|333979833|ref|YP_004517778.1| type II secretion system protein E [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823314|gb|AEG15977.1| type II secretion system protein E [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 701
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 51/205 (24%)
Query: 109 RKPLARFPSGDFSLSDCQITVHHIEHATSQVGDFAVDNRAGISRTLHRISAIRNRKGAII 168
RK +R + + +SD V H D +V+N L R+ + R ++
Sbjct: 127 RKDGSRLTATCYPMSDTWTFVLRKHHTV----DMSVEN-------LERLGTLDRRVWEVM 175
Query: 169 GLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVMIVD 228
L R GR ++LF G P GKT+++R++ LA + R++++
Sbjct: 176 RLLAR-GRT----------------NILFSGNPRSGKTSLLRKLVGELAQ--RLRIVVIG 216
Query: 229 TSSEIGGNGDIP---------HPGIGNARRMQVPNSEMQHKVLIEAVENHMPQVIVIDEI 279
E+ + P HP IG MQ + EA P V++I+E
Sbjct: 217 KDLELKLRQEYPDRNIVEFEAHPEIGTG---------MQE--IFEATLRESPDVVIIEEF 265
Query: 280 GTKLEAMAASTIAQRGIQ-LVATAH 303
K EA+ A RGI+ +ATAH
Sbjct: 266 RGKGEAVEAIHACTRGIRGAMATAH 290
>gi|226295412|gb|EEH50832.1| DNA repair and recombination protein pif1 [Paracoccidioides
brasiliensis Pb18]
Length = 759
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 188 LVQDGASLLFIGPPGVGKTTIIREIARVLANDYKK 222
+VQDG S+ F G G GK+ ++REI R L YKK
Sbjct: 248 IVQDGKSIFFTGSAGTGKSVLMREIIRKLREKYKK 282
>gi|254805664|ref|YP_003083885.1| signal recognition particle protein [Neisseria meningitidis
alpha14]
gi|254669206|emb|CBA07997.1| signal recognition particle protein [Neisseria meningitidis
alpha14]
Length = 456
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDL-VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
A IG+ + + G N DL V A +L G G GKTT + ++AR+L ND KK+V
Sbjct: 73 AFIGVVNKALTELMGKENKTLDLSVSPPAIVLMAGLQGAGKTTTVGKLARLLKNDQKKKV 132
Query: 225 MIV 227
++V
Sbjct: 133 LVV 135
>gi|242211529|ref|XP_002471602.1| predicted protein [Postia placenta Mad-698-R]
gi|220729278|gb|EED83155.1| predicted protein [Postia placenta Mad-698-R]
Length = 350
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 195 LLFIGPPGVGKTTIIREIA-RVLANDYKKRVMIVDTSSEIG 234
LLF GPPG GKT+ I +A R+ DY+K+++ ++ S + G
Sbjct: 67 LLFYGPPGTGKTSTILAVARRIYGKDYRKQILELNASDDRG 107
>gi|261400534|ref|ZP_05986659.1| signal recognition particle protein [Neisseria lactamica ATCC
23970]
gi|269209797|gb|EEZ76252.1| signal recognition particle protein [Neisseria lactamica ATCC
23970]
Length = 456
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDL-VQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRV 224
A IG+ + + G N DL V A +L G G GKTT + ++AR+L ND KK+V
Sbjct: 73 AFIGVVNKALTELMGKENKTLDLSVAPPAVVLMAGLQGAGKTTTVGKLARLLKNDQKKKV 132
Query: 225 MIV 227
++V
Sbjct: 133 LVV 135
>gi|67458542|ref|YP_246166.1| ClpB protein [Rickettsia felis URRWXCal2]
gi|67004075|gb|AAY61001.1| ClpB protein [Rickettsia felis URRWXCal2]
Length = 708
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 166 AIIGLTCRVGRAVSGSANLLQDLVQDGASLLFIGPPGVGKTTIIREIARVLANDYKKRVM 225
AI G++ V R+ +G +QD+ + S LF+GP GVGKT + + +A L +D + ++
Sbjct: 575 AIKGVSDAVRRSRAG----IQDINRPLGSFLFLGPTGVGKTELTKALASFLFDD-RNAIL 629
Query: 226 IVDTSSEIGGNGDIPHPGIGNARRMQVPNSEM---QHKVLIEAVENHMPQVIVIDEI 279
+D S + + +R + P + Q VL EAV QVI+ DE+
Sbjct: 630 RIDMSEYMEKH--------AISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEV 678
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,653,166,792
Number of Sequences: 23463169
Number of extensions: 396284882
Number of successful extensions: 1659658
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 1733
Number of HSP's that attempted gapping in prelim test: 1656501
Number of HSP's gapped (non-prelim): 3569
length of query: 660
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 511
effective length of database: 8,863,183,186
effective search space: 4529086608046
effective search space used: 4529086608046
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)