Query 038104
Match_columns 567
No_of_seqs 172 out of 2342
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 07:38:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038104.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038104hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 9.4E-82 2E-86 632.7 51.2 517 4-549 6-535 (537)
2 KOG1177 Long chain fatty acid 100.0 5.7E-78 1.2E-82 562.1 44.7 519 10-547 46-588 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 2E-77 4.4E-82 597.8 48.0 494 19-546 14-522 (528)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 2.3E-76 5E-81 616.7 55.6 512 8-546 5-527 (534)
5 COG1021 EntE Peptide arylation 100.0 2E-75 4.4E-80 532.6 34.4 504 11-546 25-538 (542)
6 PLN03102 acyl-activating enzym 100.0 1.1E-72 2.3E-77 597.7 58.2 548 1-549 1-557 (579)
7 PRK07788 acyl-CoA synthetase; 100.0 1.6E-71 3.4E-76 587.4 53.3 496 15-543 50-548 (549)
8 PLN02860 o-succinylbenzoate-Co 100.0 6.7E-71 1.5E-75 583.2 53.0 526 9-549 2-557 (563)
9 PTZ00237 acetyl-CoA synthetase 100.0 5.9E-71 1.3E-75 589.2 52.7 509 17-546 62-623 (647)
10 PLN02654 acetate-CoA ligase 100.0 3.5E-70 7.7E-75 585.2 55.7 517 12-546 85-640 (666)
11 PRK07529 AMP-binding domain pr 100.0 1.3E-69 2.7E-74 579.2 58.2 511 11-547 22-571 (632)
12 TIGR02316 propion_prpE propion 100.0 3.9E-70 8.6E-75 583.6 54.4 519 13-546 50-604 (628)
13 PLN02736 long-chain acyl-CoA s 100.0 1.4E-69 3.1E-74 581.3 50.7 516 11-548 41-643 (651)
14 PRK13295 cyclohexanecarboxylat 100.0 1.1E-68 2.5E-73 565.0 56.8 506 8-546 18-544 (547)
15 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 6.8E-69 1.5E-73 575.1 54.9 511 16-547 59-603 (625)
16 PRK06187 long-chain-fatty-acid 100.0 2.5E-68 5.4E-73 561.3 57.7 519 9-547 1-520 (521)
17 PRK00174 acetyl-CoA synthetase 100.0 1.2E-68 2.6E-73 574.0 55.4 509 17-547 70-611 (637)
18 PRK06334 long chain fatty acid 100.0 5E-69 1.1E-73 564.7 51.2 504 5-547 10-536 (539)
19 PRK08314 long-chain-fatty-acid 100.0 2.6E-68 5.6E-73 563.4 56.0 514 8-547 4-543 (546)
20 PRK07008 long-chain-fatty-acid 100.0 6.6E-68 1.4E-72 557.8 57.3 522 12-550 8-537 (539)
21 PLN02246 4-coumarate--CoA liga 100.0 6.7E-68 1.5E-72 558.2 57.2 505 13-546 22-536 (537)
22 PRK06839 acyl-CoA synthetase; 100.0 3.9E-68 8.5E-73 555.8 54.9 491 15-546 3-495 (496)
23 PLN02574 4-coumarate--CoA liga 100.0 2.7E-68 6E-73 563.0 54.2 507 13-550 39-558 (560)
24 PRK13382 acyl-CoA synthetase; 100.0 2.8E-68 6.1E-73 560.0 53.9 494 11-542 40-536 (537)
25 PRK08162 acyl-CoA synthetase; 100.0 1.5E-67 3.2E-72 557.2 59.2 534 4-550 8-543 (545)
26 PRK06155 crotonobetaine/carnit 100.0 8.1E-68 1.8E-72 556.8 56.6 505 8-545 15-523 (542)
27 PRK03640 O-succinylbenzoic aci 100.0 6.2E-68 1.4E-72 552.2 55.0 481 14-546 2-482 (483)
28 PLN02479 acetate-CoA ligase 100.0 1.1E-67 2.5E-72 559.1 56.5 548 2-550 8-562 (567)
29 PRK07656 long-chain-fatty-acid 100.0 1.2E-67 2.7E-72 554.6 56.3 506 12-542 3-512 (513)
30 PRK05605 long-chain-fatty-acid 100.0 1.2E-67 2.6E-72 560.7 56.7 513 10-547 28-570 (573)
31 PRK04319 acetyl-CoA synthetase 100.0 5.8E-68 1.3E-72 562.1 52.4 507 13-547 41-560 (570)
32 PRK05677 long-chain-fatty-acid 100.0 2.3E-67 5E-72 556.6 56.5 506 14-546 24-557 (562)
33 PLN02614 long-chain acyl-CoA s 100.0 2.9E-68 6.4E-73 569.2 49.8 513 14-548 45-651 (666)
34 PRK07470 acyl-CoA synthetase; 100.0 3.1E-67 6.8E-72 552.5 56.7 517 9-551 2-523 (528)
35 PRK10524 prpE propionyl-CoA sy 100.0 1.6E-67 3.5E-72 564.9 54.2 519 13-546 51-605 (629)
36 PRK07638 acyl-CoA synthetase; 100.0 2.7E-67 5.8E-72 547.4 52.8 482 14-549 1-484 (487)
37 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.3E-67 7.1E-72 561.5 52.9 514 9-546 79-626 (652)
38 PRK08316 acyl-CoA synthetase; 100.0 1.5E-66 3.2E-71 547.8 56.5 509 13-548 10-521 (523)
39 PLN02861 long-chain-fatty-acid 100.0 3.9E-67 8.5E-72 561.1 51.5 512 14-548 43-648 (660)
40 PRK06018 putative acyl-CoA syn 100.0 2.3E-66 4.9E-71 546.9 56.5 521 10-547 6-535 (542)
41 PRK05857 acyl-CoA synthetase; 100.0 2.4E-67 5.1E-72 553.4 48.2 513 7-547 7-532 (540)
42 PRK06087 short chain acyl-CoA 100.0 4.6E-66 1E-70 545.8 57.6 511 10-548 19-538 (547)
43 PRK09274 peptide synthase; Pro 100.0 4.2E-67 9E-72 554.4 49.2 507 11-547 3-549 (552)
44 PRK07867 acyl-CoA synthetase; 100.0 2.1E-66 4.6E-71 543.9 53.9 491 13-548 4-509 (529)
45 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.2E-66 6.9E-71 544.2 54.9 502 11-541 20-527 (527)
46 PRK03584 acetoacetyl-CoA synth 100.0 1.7E-66 3.7E-71 558.7 54.0 505 14-547 86-626 (655)
47 PRK07786 long-chain-fatty-acid 100.0 4.8E-66 1E-70 544.4 56.2 511 12-552 15-530 (542)
48 PRK06145 acyl-CoA synthetase; 100.0 5.8E-66 1.3E-70 539.2 55.2 492 14-545 2-496 (497)
49 PRK05620 long-chain-fatty-acid 100.0 5.3E-66 1.1E-70 547.8 55.5 524 9-547 5-558 (576)
50 PRK08315 AMP-binding domain pr 100.0 8E-66 1.7E-70 545.9 56.2 522 8-550 10-555 (559)
51 PRK05852 acyl-CoA synthetase; 100.0 2.4E-66 5.1E-71 546.1 51.8 508 13-546 15-532 (534)
52 PLN02330 4-coumarate--CoA liga 100.0 5E-66 1.1E-70 544.8 54.0 504 13-547 27-542 (546)
53 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7E-66 1.5E-70 541.4 54.5 500 15-542 1-514 (515)
54 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 9.5E-66 2.1E-70 542.0 54.8 499 10-541 18-537 (538)
55 PRK06188 acyl-CoA synthetase; 100.0 1.5E-65 3.2E-70 539.3 56.1 508 11-547 9-518 (524)
56 PLN03052 acetate--CoA ligase; 100.0 5.3E-66 1.1E-70 553.9 53.5 510 13-548 173-723 (728)
57 PRK07769 long-chain-fatty-acid 100.0 2E-66 4.3E-71 556.3 49.9 515 2-547 10-615 (631)
58 PRK12583 acyl-CoA synthetase; 100.0 4.1E-65 8.8E-70 540.6 58.5 516 10-547 14-553 (558)
59 PRK07514 malonyl-CoA synthase; 100.0 2.1E-65 4.6E-70 536.1 55.5 497 14-548 3-503 (504)
60 PRK08008 caiC putative crotono 100.0 1.8E-65 4E-70 537.9 55.1 501 13-541 6-517 (517)
61 PTZ00342 acyl-CoA synthetase; 100.0 3.1E-66 6.7E-71 551.5 49.2 512 12-548 59-736 (746)
62 PRK06060 acyl-CoA synthetase; 100.0 6.2E-66 1.3E-70 558.6 49.7 478 15-544 5-490 (705)
63 PRK13388 acyl-CoA synthetase; 100.0 3.1E-65 6.7E-70 536.9 53.1 488 14-547 3-507 (540)
64 PRK06164 acyl-CoA synthetase; 100.0 5.1E-65 1.1E-69 537.2 54.7 518 12-549 8-535 (540)
65 PRK06178 acyl-CoA synthetase; 100.0 2.3E-64 4.9E-69 535.0 57.1 520 8-547 27-566 (567)
66 PRK09088 acyl-CoA synthetase; 100.0 6.5E-65 1.4E-69 529.9 51.3 478 21-547 2-486 (488)
67 PRK10946 entE enterobactin syn 100.0 1E-64 2.2E-69 533.3 53.2 503 10-548 21-534 (536)
68 PRK06710 long-chain-fatty-acid 100.0 2.2E-64 4.8E-69 534.5 55.3 507 14-546 24-555 (563)
69 PRK12492 long-chain-fatty-acid 100.0 2.9E-64 6.3E-69 532.9 55.3 503 14-543 24-561 (562)
70 PRK08279 long-chain-acyl-CoA s 100.0 1.1E-64 2.4E-69 540.4 52.0 508 9-551 32-569 (600)
71 PLN02387 long-chain-fatty-acid 100.0 7.2E-65 1.6E-69 545.7 50.6 514 14-548 58-691 (696)
72 PRK12476 putative fatty-acid-- 100.0 6E-65 1.3E-69 542.5 48.5 504 12-547 32-607 (612)
73 PRK08043 bifunctional acyl-[ac 100.0 5.4E-65 1.2E-69 551.4 48.4 492 12-547 202-714 (718)
74 PRK08751 putative long-chain f 100.0 4.2E-64 9.1E-69 532.4 54.0 504 14-544 25-558 (560)
75 PRK07059 Long-chain-fatty-acid 100.0 6.9E-64 1.5E-68 530.1 55.6 504 13-543 22-555 (557)
76 TIGR03205 pimA dicarboxylate-- 100.0 1.4E-63 3E-68 525.9 56.6 507 10-541 17-541 (541)
77 PRK13383 acyl-CoA synthetase; 100.0 2.7E-64 5.9E-69 528.1 51.0 481 9-541 30-515 (516)
78 PRK08633 2-acyl-glycerophospho 100.0 1.9E-64 4E-69 579.1 52.8 517 11-547 612-1144(1146)
79 PLN02430 long-chain-fatty-acid 100.0 2.6E-64 5.7E-69 538.2 48.7 516 12-548 40-648 (660)
80 TIGR03443 alpha_am_amid L-amin 100.0 2.9E-64 6.3E-69 584.7 51.4 520 13-542 235-824 (1389)
81 PRK05851 long-chain-fatty-acid 100.0 1.6E-64 3.4E-69 530.1 44.2 488 14-546 1-522 (525)
82 TIGR02262 benz_CoA_lig benzoat 100.0 6.3E-63 1.4E-67 517.3 54.0 496 17-542 7-507 (508)
83 PRK07798 acyl-CoA synthetase; 100.0 1.7E-62 3.6E-67 518.4 55.8 504 13-546 2-532 (533)
84 PRK08180 feruloyl-CoA synthase 100.0 3E-63 6.5E-68 529.2 48.5 504 8-548 33-598 (614)
85 PRK08974 long-chain-fatty-acid 100.0 4.8E-62 1E-66 516.4 56.6 506 14-546 23-555 (560)
86 TIGR01734 D-ala-DACP-lig D-ala 100.0 8.9E-63 1.9E-67 516.0 50.2 491 15-545 1-501 (502)
87 PRK12467 peptide synthase; Pro 100.0 4.6E-64 1E-68 618.9 47.1 489 13-546 3094-3594(3956)
88 PRK10252 entF enterobactin syn 100.0 2.7E-63 5.8E-68 574.9 50.6 493 9-543 453-964 (1296)
89 PRK13390 acyl-CoA synthetase; 100.0 1E-62 2.2E-67 514.9 49.2 484 21-541 4-501 (501)
90 KOG1175 Acyl-CoA synthetase [L 100.0 1.4E-63 3.1E-68 498.3 39.1 517 19-560 69-615 (626)
91 COG1022 FAA1 Long-chain acyl-C 100.0 3.1E-63 6.8E-68 502.4 41.0 499 12-547 14-602 (613)
92 PTZ00216 acyl-CoA synthetase; 100.0 3.6E-62 7.7E-67 526.4 50.1 511 12-548 67-693 (700)
93 PRK07787 acyl-CoA synthetase; 100.0 4.9E-62 1.1E-66 505.1 48.7 457 24-543 10-470 (471)
94 PRK09029 O-succinylbenzoic aci 100.0 3.4E-62 7.3E-67 504.8 47.4 451 15-547 3-454 (458)
95 PRK07445 O-succinylbenzoic aci 100.0 3E-62 6.5E-67 500.8 45.0 429 39-547 19-448 (452)
96 PRK04813 D-alanine--poly(phosp 100.0 1.1E-61 2.4E-66 508.2 50.1 492 14-545 2-502 (503)
97 PRK12467 peptide synthase; Pro 100.0 1.7E-62 3.7E-67 605.1 50.2 498 9-545 507-1017(3956)
98 PRK12406 long-chain-fatty-acid 100.0 4.5E-61 9.9E-66 503.4 53.0 485 31-547 3-504 (509)
99 PRK12316 peptide synthase; Pro 100.0 3.5E-62 7.7E-67 611.3 50.6 483 13-544 510-1004(5163)
100 PRK13391 acyl-CoA synthetase; 100.0 1E-60 2.2E-65 500.7 53.3 495 20-546 3-509 (511)
101 PRK12316 peptide synthase; Pro 100.0 3.6E-62 7.8E-67 611.3 49.9 489 13-544 2002-2502(5163)
102 PRK07868 acyl-CoA synthetase; 100.0 1.7E-60 3.6E-65 527.8 53.7 490 11-545 444-957 (994)
103 PRK06814 acylglycerophosphoeth 100.0 1.8E-60 3.9E-65 543.8 54.1 500 11-550 628-1136(1140)
104 PRK08276 long-chain-fatty-acid 100.0 3.8E-60 8.3E-65 495.7 51.2 485 31-547 3-497 (502)
105 PRK05691 peptide synthase; Val 100.0 3.1E-61 6.8E-66 599.1 49.4 494 13-543 3719-4225(4334)
106 PLN03051 acyl-activating enzym 100.0 6.3E-61 1.4E-65 499.3 43.3 453 71-549 1-494 (499)
107 PRK12582 acyl-CoA synthetase; 100.0 1.4E-60 3E-65 509.7 46.3 499 12-548 47-609 (624)
108 PRK05691 peptide synthase; Val 100.0 8.5E-61 1.9E-65 595.2 50.9 485 11-543 1128-1625(4334)
109 PRK05850 acyl-CoA synthetase; 100.0 2.7E-60 5.9E-65 504.9 47.2 507 14-550 1-572 (578)
110 KOG1256 Long-chain acyl-CoA sy 100.0 1.1E-60 2.3E-65 475.7 40.4 517 10-548 71-682 (691)
111 TIGR01923 menE O-succinylbenzo 100.0 4.1E-60 8.9E-65 487.0 44.1 436 41-540 1-436 (436)
112 PRK09192 acyl-CoA synthetase; 100.0 1.6E-59 3.5E-64 498.1 46.1 499 14-548 21-568 (579)
113 KOG1179 Very long-chain acyl-C 100.0 7.3E-59 1.6E-63 443.4 39.6 516 10-552 73-619 (649)
114 PRK07768 long-chain-fatty-acid 100.0 8.6E-58 1.9E-62 482.5 44.7 495 15-545 3-544 (545)
115 KOG1180 Acyl-CoA synthetase [L 100.0 3E-58 6.5E-63 437.2 35.2 515 12-547 39-670 (678)
116 PRK08308 acyl-CoA synthetase; 100.0 3.6E-57 7.7E-62 460.6 45.1 406 32-540 1-407 (414)
117 PF00501 AMP-binding: AMP-bind 100.0 2.1E-55 4.5E-60 449.3 34.7 399 20-446 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 3.3E-51 7.1E-56 417.3 38.1 393 41-470 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 6.7E-47 1.4E-51 377.6 36.2 321 180-546 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.5E-45 3.3E-50 407.6 46.6 476 14-549 427-998 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 9.9E-38 2.1E-42 336.0 39.4 406 14-463 227-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 5.5E-38 1.2E-42 310.9 31.2 288 183-536 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 9.4E-36 2E-40 303.1 28.4 328 181-538 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 1.4E-32 3E-37 279.9 37.8 509 14-547 770-1352(1363)
125 KOG1178 Non-ribosomal peptide 100.0 6.2E-32 1.3E-36 284.4 25.6 504 14-552 36-585 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 2.4E-28 5.2E-33 248.6 28.7 322 181-537 84-440 (445)
127 TIGR03089 conserved hypothetic 100.0 1.5E-26 3.3E-31 212.2 22.9 214 20-273 2-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 1.3E-25 2.9E-30 215.9 27.7 322 180-537 87-430 (438)
129 PRK09188 serine/threonine prot 99.9 1.9E-21 4.2E-26 188.3 14.1 117 414-544 206-326 (365)
130 KOG3628 Predicted AMP-binding 99.8 3.4E-19 7.4E-24 183.0 23.4 500 16-550 96-708 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 1.3E-16 2.8E-21 158.6 25.6 241 185-473 101-366 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 4.3E-12 9.4E-17 93.7 6.0 70 454-534 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 5.2E-08 1.1E-12 95.1 18.9 224 182-441 88-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.6 5.3E-07 1.1E-11 93.4 14.7 177 296-512 266-467 (528)
135 PLN02249 indole-3-acetic acid- 98.1 0.00021 4.5E-09 74.5 17.6 58 388-461 395-456 (597)
136 PLN02247 indole-3-acetic acid- 97.9 0.0018 3.8E-08 67.2 20.6 138 295-462 291-464 (606)
137 PLN02620 indole-3-acetic acid- 97.9 0.001 2.2E-08 68.7 18.8 138 295-462 302-470 (612)
138 PF14535 AMP-binding_C_2: AMP- 97.6 0.00025 5.4E-09 55.1 7.3 87 447-537 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 96.1 0.065 1.4E-06 53.2 11.2 94 39-133 109-204 (438)
140 TIGR03335 F390_ftsA coenzyme F 91.7 2.4 5.1E-05 43.6 12.3 87 38-127 104-192 (445)
141 TIGR02155 PA_CoA_ligase phenyl 91.3 2.4 5.3E-05 43.2 11.9 90 39-129 94-185 (422)
142 TIGR03089 conserved hypothetic 84.1 5.8 0.00013 36.4 8.3 75 29-112 150-226 (227)
143 PRK07656 long-chain-fatty-acid 79.0 18 0.00038 37.9 11.0 86 38-127 184-271 (513)
144 KOG1177 Long chain fatty acid 77.8 38 0.00082 34.4 11.5 83 38-123 252-336 (596)
145 PRK06187 long-chain-fatty-acid 73.6 36 0.00078 35.6 11.6 86 38-127 185-271 (521)
146 PRK08315 AMP-binding domain pr 73.1 38 0.00082 35.9 11.7 83 38-123 217-301 (559)
147 PRK06334 long chain fatty acid 71.2 45 0.00098 35.3 11.6 98 27-127 181-289 (539)
148 PRK12583 acyl-CoA synthetase; 70.8 45 0.00098 35.3 11.6 82 38-122 219-302 (558)
149 TIGR01923 menE O-succinylbenzo 68.0 39 0.00085 34.4 10.1 83 38-126 129-212 (436)
150 PRK04319 acetyl-CoA synthetase 67.0 51 0.0011 35.1 11.1 86 38-126 223-310 (570)
151 PLN03051 acyl-activating enzym 66.4 39 0.00085 35.3 9.9 86 38-126 137-223 (499)
152 PRK02261 methylaspartate mutas 66.3 70 0.0015 26.6 9.3 100 226-330 6-119 (137)
153 PLN02736 long-chain acyl-CoA s 66.1 1.2E+02 0.0027 32.9 14.0 100 201-305 77-180 (651)
154 COG0399 WecE Predicted pyridox 66.0 27 0.00059 34.6 7.8 78 49-130 59-146 (374)
155 PLN02860 o-succinylbenzoate-Co 65.5 90 0.002 33.2 12.6 98 27-128 170-277 (563)
156 COG1167 ARO8 Transcriptional r 64.7 1.3E+02 0.0029 31.0 13.0 59 61-120 176-235 (459)
157 TIGR01733 AA-adenyl-dom amino 64.0 74 0.0016 31.9 11.2 99 28-129 119-229 (408)
158 TIGR03098 ligase_PEP_1 acyl-Co 63.3 51 0.0011 34.4 10.1 85 38-126 179-264 (515)
159 PRK03640 O-succinylbenzoic aci 63.1 80 0.0017 32.6 11.5 85 38-126 159-244 (483)
160 PRK15407 lipopolysaccharide bi 58.3 2.2E+02 0.0048 29.1 13.3 56 59-118 106-166 (438)
161 PRK06164 acyl-CoA synthetase; 57.8 94 0.002 32.7 11.0 96 28-127 180-285 (540)
162 PRK08308 acyl-CoA synthetase; 57.4 1.3E+02 0.0029 30.3 11.7 86 38-127 119-206 (414)
163 KOG0023 Alcohol dehydrogenase, 57.0 68 0.0015 30.8 8.2 73 55-130 173-245 (360)
164 PRK08316 acyl-CoA synthetase; 56.8 1.1E+02 0.0024 31.9 11.3 84 38-125 189-274 (523)
165 PF01041 DegT_DnrJ_EryC1: DegT 56.7 39 0.00084 33.6 7.4 64 51-118 52-120 (363)
166 cd00640 Trp-synth-beta_II Tryp 56.4 1.7E+02 0.0036 27.1 11.4 91 28-121 14-106 (244)
167 TIGR03590 PseG pseudaminic aci 56.3 1.5E+02 0.0033 28.1 11.0 99 38-151 10-113 (279)
168 TIGR02379 ECA_wecE TDP-4-keto- 55.8 2.2E+02 0.0049 28.4 14.9 59 56-118 63-126 (376)
169 PLN03052 acetate--CoA ligase; 54.6 1.2E+02 0.0026 33.5 11.4 97 182-280 189-289 (728)
170 PRK06188 acyl-CoA synthetase; 54.6 1.3E+02 0.0029 31.4 11.5 85 38-126 186-270 (524)
171 PF00501 AMP-binding: AMP-bind 54.5 1E+02 0.0022 31.1 10.2 88 181-277 8-99 (417)
172 PRK11761 cysM cysteine synthas 54.5 1.5E+02 0.0033 28.4 10.7 87 30-119 28-117 (296)
173 PRK09274 peptide synthase; Pro 54.3 1.3E+02 0.0029 31.7 11.5 79 200-279 39-121 (552)
174 PRK07529 AMP-binding domain pr 53.9 1.1E+02 0.0023 33.2 10.8 97 181-279 38-137 (632)
175 COG4009 Uncharacterized protei 53.8 75 0.0016 23.1 6.1 65 39-114 9-76 (88)
176 PTZ00237 acetyl-CoA synthetase 53.3 1.3E+02 0.0029 32.7 11.3 78 201-279 91-172 (647)
177 KOG1176 Acyl-CoA synthetase [L 53.3 1.1E+02 0.0023 32.3 10.0 87 200-287 43-135 (537)
178 PLN02556 cysteine synthase/L-3 53.0 1.4E+02 0.0031 29.7 10.5 62 58-119 103-165 (368)
179 PRK08043 bifunctional acyl-[ac 52.6 1.2E+02 0.0026 33.5 11.0 82 38-122 383-466 (718)
180 cd01445 TST_Repeats Thiosulfat 51.7 44 0.00096 27.8 5.8 43 50-92 81-126 (138)
181 PRK08314 long-chain-fatty-acid 50.4 1.5E+02 0.0033 31.1 11.2 94 27-124 188-292 (546)
182 PRK07638 acyl-CoA synthetase; 50.4 1.2E+02 0.0026 31.4 10.2 86 38-127 161-247 (487)
183 TIGR02262 benz_CoA_lig benzoat 50.3 1.5E+02 0.0033 30.9 11.0 95 28-124 160-265 (508)
184 PLN02246 4-coumarate--CoA liga 50.2 1.3E+02 0.0029 31.6 10.6 98 27-125 177-286 (537)
185 PLN02565 cysteine synthase 49.7 2.6E+02 0.0056 27.3 11.7 89 30-120 31-122 (322)
186 PRK10252 entF enterobactin syn 49.6 2E+02 0.0044 34.3 13.1 98 27-127 596-705 (1296)
187 cd06448 L-Ser-dehyd Serine deh 48.5 2.3E+02 0.005 27.5 11.1 90 28-120 15-106 (316)
188 PLN02387 long-chain-fatty-acid 47.9 1.9E+02 0.0041 31.8 11.6 102 200-306 104-209 (696)
189 PF00464 SHMT: Serine hydroxym 47.8 3.1E+02 0.0067 27.7 12.7 119 61-205 107-245 (399)
190 PLN02654 acetate-CoA ligase 47.3 1.7E+02 0.0037 32.0 11.1 79 201-280 119-201 (666)
191 PRK07788 acyl-CoA synthetase; 47.1 1.3E+02 0.0028 31.8 10.0 87 38-128 225-312 (549)
192 TIGR01217 ac_ac_CoA_syn acetoa 47.1 1.7E+02 0.0036 31.9 11.0 78 201-279 113-194 (652)
193 PRK13295 cyclohexanecarboxylat 47.1 2.2E+02 0.0048 30.0 11.8 84 38-125 215-300 (547)
194 cd01561 CBS_like CBS_like: Thi 44.8 2.7E+02 0.0058 26.6 10.9 90 29-121 17-109 (291)
195 COG0318 CaiC Acyl-CoA syntheta 44.8 2.3E+02 0.005 29.9 11.3 98 27-125 169-278 (534)
196 PRK08279 long-chain-acyl-CoA s 44.5 2E+02 0.0044 30.8 11.1 83 38-124 217-301 (600)
197 PRK10696 tRNA 2-thiocytidine b 44.3 2.2E+02 0.0047 26.7 9.9 78 41-118 4-94 (258)
198 PRK07470 acyl-CoA synthetase; 43.6 2.5E+02 0.0055 29.3 11.5 88 38-126 181-269 (528)
199 PRK08633 2-acyl-glycerophospho 43.5 2.1E+02 0.0045 33.7 11.8 97 27-126 780-887 (1146)
200 TIGR02275 DHB_AMP_lig 2,3-dihy 43.3 2.3E+02 0.0049 29.7 11.1 96 27-126 181-288 (527)
201 COG0365 Acs Acyl-coenzyme A sy 43.0 1.5E+02 0.0033 31.1 9.2 94 186-284 27-125 (528)
202 TIGR02188 Ac_CoA_lig_AcsA acet 42.9 2.1E+02 0.0046 30.8 11.0 96 181-280 70-169 (625)
203 COG0436 Aspartate/tyrosine/aro 42.4 3.7E+02 0.0081 27.1 12.9 21 193-213 239-260 (393)
204 PRK06155 crotonobetaine/carnit 41.9 1.7E+02 0.0036 30.9 9.8 85 202-287 46-134 (542)
205 TIGR00936 ahcY adenosylhomocys 41.8 2.3E+02 0.0049 28.7 9.9 58 63-120 31-90 (406)
206 PRK05620 long-chain-fatty-acid 41.8 2.6E+02 0.0057 29.7 11.4 87 38-125 199-286 (576)
207 PRK10946 entE enterobactin syn 41.7 3E+02 0.0066 28.9 11.7 86 38-127 200-288 (536)
208 PRK05850 acyl-CoA synthetase; 41.7 3E+02 0.0064 29.3 11.8 84 201-286 34-124 (578)
209 PRK13388 acyl-CoA synthetase; 41.5 3.4E+02 0.0073 28.6 12.1 92 27-122 148-250 (540)
210 TIGR02372 4_coum_CoA_lig 4-cou 41.5 3.8E+02 0.0082 26.9 13.2 108 13-126 79-199 (386)
211 cd01449 TST_Repeat_2 Thiosulfa 41.2 66 0.0014 25.5 5.2 41 50-90 64-104 (118)
212 PRK05852 acyl-CoA synthetase; 41.0 3.9E+02 0.0084 28.0 12.4 87 38-127 194-283 (534)
213 PRK11493 sseA 3-mercaptopyruva 41.0 49 0.0011 31.5 5.0 53 39-91 201-258 (281)
214 PRK11706 TDP-4-oxo-6-deoxy-D-g 40.1 1E+02 0.0022 30.7 7.4 56 58-117 65-125 (375)
215 PRK07787 acyl-CoA synthetase; 40.0 2.7E+02 0.0059 28.6 10.9 84 38-126 146-231 (471)
216 PRK03584 acetoacetyl-CoA synth 39.9 2.6E+02 0.0057 30.4 11.1 94 182-280 98-195 (655)
217 TIGR03595 Obg_CgtA_exten Obg f 39.8 35 0.00075 24.4 2.9 19 52-70 45-63 (69)
218 PLN03013 cysteine synthase 39.7 2.1E+02 0.0046 29.1 9.4 80 39-120 150-230 (429)
219 TIGR01139 cysK cysteine syntha 39.6 2.7E+02 0.0059 26.6 10.0 90 29-121 21-113 (298)
220 PRK08276 long-chain-fatty-acid 39.5 1.9E+02 0.0042 29.9 9.8 83 202-285 11-97 (502)
221 cd00754 MoaD Ubiquitin domain 39.2 98 0.0021 22.5 5.5 46 13-73 25-77 (80)
222 PF09269 DUF1967: Domain of un 38.7 30 0.00066 24.7 2.4 21 49-69 42-62 (69)
223 COG0031 CysK Cysteine synthase 38.7 2.6E+02 0.0057 26.8 9.2 68 51-119 44-116 (300)
224 PLN02550 threonine dehydratase 38.6 5.3E+02 0.011 27.7 12.5 104 16-124 111-216 (591)
225 TIGR01136 cysKM cysteine synth 38.5 2.4E+02 0.0052 27.0 9.5 89 29-120 22-113 (299)
226 PLN02614 long-chain acyl-CoA s 38.2 4.3E+02 0.0093 28.9 12.4 85 201-286 78-166 (666)
227 COG1171 IlvA Threonine dehydra 38.2 3.2E+02 0.0069 26.9 9.9 111 15-130 26-139 (347)
228 PRK05857 acyl-CoA synthetase; 38.0 2.3E+02 0.0049 29.9 10.1 80 201-281 40-123 (540)
229 KOG1179 Very long-chain acyl-C 37.4 1.5E+02 0.0032 31.0 7.7 77 39-120 261-340 (649)
230 PTZ00342 acyl-CoA synthetase; 37.3 3.1E+02 0.0067 30.5 11.1 101 201-306 90-208 (746)
231 PLN00011 cysteine synthase 37.2 2.6E+02 0.0056 27.2 9.5 88 30-120 33-124 (323)
232 PLN02330 4-coumarate--CoA liga 37.2 2.4E+02 0.0051 29.8 10.1 84 201-285 54-141 (546)
233 KOG0257 Kynurenine aminotransf 36.8 4.5E+02 0.0098 26.4 11.7 168 50-241 104-290 (420)
234 PRK00174 acetyl-CoA synthetase 36.5 2.9E+02 0.0063 29.9 10.8 95 182-280 81-179 (637)
235 TIGR02316 propion_prpE propion 36.4 3E+02 0.0064 29.8 10.8 94 182-279 66-163 (628)
236 PRK07798 acyl-CoA synthetase; 36.3 3.7E+02 0.0079 28.0 11.4 85 201-286 27-115 (533)
237 PRK11658 UDP-4-amino-4-deoxy-L 35.4 1.4E+02 0.0031 29.8 7.6 62 51-116 60-126 (379)
238 cd01519 RHOD_HSP67B2 Member of 35.4 89 0.0019 24.1 5.0 53 38-90 36-92 (106)
239 PRK05677 long-chain-fatty-acid 35.2 3E+02 0.0064 29.2 10.5 81 202-283 49-134 (562)
240 TIGR03588 PseC UDP-4-keto-6-de 35.0 1.8E+02 0.0039 29.0 8.3 65 50-117 55-127 (380)
241 PRK10717 cysteine synthase A; 34.8 2.9E+02 0.0063 27.0 9.5 88 30-120 29-119 (330)
242 PRK07476 eutB threonine dehydr 34.7 3.5E+02 0.0076 26.3 10.0 92 26-122 31-124 (322)
243 PRK10595 SOS cell division inh 34.7 1.6E+02 0.0035 25.3 6.5 37 53-89 70-106 (164)
244 PRK06814 acylglycerophosphoeth 34.7 3.8E+02 0.0082 31.6 12.0 96 27-125 791-897 (1140)
245 COG1064 AdhP Zn-dependent alco 34.6 3.1E+02 0.0068 26.9 9.3 61 55-119 158-218 (339)
246 PRK12476 putative fatty-acid-- 34.6 5.4E+02 0.012 27.6 12.4 84 201-285 67-156 (612)
247 COG1022 FAA1 Long-chain acyl-C 34.1 3.7E+02 0.0081 28.9 10.5 101 26-130 188-298 (613)
248 PRK10524 prpE propionyl-CoA sy 33.7 3.6E+02 0.0079 29.0 11.0 94 182-279 67-164 (629)
249 TIGR01138 cysM cysteine syntha 33.5 4.3E+02 0.0094 25.2 10.5 88 29-119 23-113 (290)
250 PRK06381 threonine synthase; V 32.9 4.6E+02 0.01 25.4 11.0 102 15-122 16-120 (319)
251 PRK13391 acyl-CoA synthetase; 32.8 4.4E+02 0.0095 27.4 11.2 97 181-285 10-110 (511)
252 PF09580 Spore_YhcN_YlaJ: Spor 32.5 1.4E+02 0.0031 25.9 6.3 25 451-475 76-100 (177)
253 COG2236 Predicted phosphoribos 32.0 76 0.0016 28.1 4.3 47 38-84 5-53 (192)
254 KOG0256 1-aminocyclopropane-1- 31.8 5.5E+02 0.012 25.9 13.8 189 16-220 86-333 (471)
255 PRK06839 acyl-CoA synthetase; 31.6 4.5E+02 0.0098 27.0 11.0 85 201-286 26-115 (496)
256 PRK06382 threonine dehydratase 31.4 3.9E+02 0.0085 27.0 10.0 50 74-123 82-131 (406)
257 PLN02861 long-chain-fatty-acid 31.2 3.3E+02 0.0071 29.7 10.1 85 201-286 76-164 (660)
258 PRK07008 long-chain-fatty-acid 31.1 1.6E+02 0.0034 31.1 7.5 87 38-126 194-282 (539)
259 TIGR01734 D-ala-DACP-lig D-ala 30.8 4.3E+02 0.0094 27.3 10.7 85 38-125 159-246 (502)
260 PRK06702 O-acetylhomoserine am 30.5 2.1E+02 0.0047 29.2 7.9 50 70-119 81-133 (432)
261 PF01297 TroA: Periplasmic sol 30.5 4.3E+02 0.0094 24.5 9.6 98 42-150 127-231 (256)
262 PF02729 OTCace_N: Aspartate/o 30.4 3.2E+02 0.007 22.8 12.2 87 44-131 16-114 (142)
263 PRK05942 aspartate aminotransf 30.4 5.7E+02 0.012 25.6 12.3 19 194-212 247-265 (394)
264 PLN03102 acyl-activating enzym 30.4 2.3E+02 0.005 30.2 8.7 83 202-285 39-125 (579)
265 PLN02723 3-mercaptopyruvate su 30.1 1.1E+02 0.0024 29.8 5.6 54 39-92 238-297 (320)
266 PRK12414 putative aminotransfe 29.4 5.8E+02 0.013 25.4 14.2 150 49-224 100-269 (384)
267 PF06277 EutA: Ethanolamine ut 29.0 4.3E+02 0.0094 27.2 9.4 65 14-79 353-423 (473)
268 TIGR03443 alpha_am_amid L-amin 29.0 3.4E+02 0.0073 32.8 10.5 97 181-278 249-349 (1389)
269 KOG0025 Zn2+-binding dehydroge 28.9 1.5E+02 0.0032 28.2 5.7 65 60-124 157-222 (354)
270 COG0379 NadA Quinolinate synth 28.4 4.1E+02 0.0089 25.6 8.5 114 1-128 96-226 (324)
271 PF09153 DUF1938: Domain of un 28.1 1.7E+02 0.0037 21.7 4.6 32 31-62 16-54 (86)
272 PRK07059 Long-chain-fatty-acid 27.9 3.3E+02 0.0071 28.8 9.3 83 201-284 47-133 (557)
273 COG5012 Predicted cobalamin bi 27.9 4.2E+02 0.0091 24.1 8.1 84 232-317 114-205 (227)
274 COG3660 Predicted nucleoside-d 27.8 5.2E+02 0.011 24.3 10.4 106 29-149 162-273 (329)
275 PRK09224 threonine dehydratase 27.8 6.1E+02 0.013 26.6 10.8 101 22-127 28-130 (504)
276 PRK02261 methylaspartate mutas 27.7 3.5E+02 0.0077 22.4 7.6 45 75-119 18-62 (137)
277 PLN02430 long-chain-fatty-acid 27.7 8E+02 0.017 26.7 12.3 84 201-285 75-162 (660)
278 PRK06145 acyl-CoA synthetase; 27.6 6.8E+02 0.015 25.8 11.5 85 38-126 167-253 (497)
279 PRK07768 long-chain-fatty-acid 27.6 5.1E+02 0.011 27.2 10.7 94 28-124 151-259 (545)
280 TIGR01137 cysta_beta cystathio 27.4 5E+02 0.011 26.6 10.3 87 30-119 27-116 (454)
281 TIGR03208 cyc_hxne_CoA_lg cycl 27.3 6.1E+02 0.013 26.6 11.2 84 38-125 213-298 (538)
282 PRK06060 acyl-CoA synthetase; 27.2 4E+02 0.0086 29.3 10.0 88 38-127 163-252 (705)
283 PRK05851 long-chain-fatty-acid 27.0 4.8E+02 0.01 27.3 10.3 77 38-117 170-251 (525)
284 TIGR02370 pyl_corrinoid methyl 27.0 4.5E+02 0.0098 23.4 11.8 89 226-316 86-184 (197)
285 PRK08008 caiC putative crotono 26.9 5.1E+02 0.011 26.9 10.5 83 202-285 37-123 (517)
286 TIGR01127 ilvA_1Cterm threonin 26.3 4.9E+02 0.011 26.0 9.7 94 25-123 11-106 (380)
287 cd02070 corrinoid_protein_B12- 26.3 4.7E+02 0.01 23.3 11.0 97 36-132 47-157 (201)
288 cd07050 BMC_EutL_repeat2 ethan 26.2 1.4E+02 0.003 22.0 3.9 41 53-93 3-44 (87)
289 cd02069 methionine_synthase_B1 26.0 4.8E+02 0.01 23.6 8.6 94 222-316 87-186 (213)
290 PRK12582 acyl-CoA synthetase; 26.0 2.7E+02 0.0058 30.1 8.3 78 201-279 79-165 (624)
291 PLN02356 phosphateglycerate ki 25.7 5E+02 0.011 26.5 9.3 86 30-118 69-157 (423)
292 cd01019 ZnuA Zinc binding prot 25.6 5.9E+02 0.013 24.2 9.8 89 42-130 156-247 (286)
293 KOG1250 Threonine/serine dehyd 25.3 5.3E+02 0.011 25.8 8.9 68 51-121 103-170 (457)
294 PRK05605 long-chain-fatty-acid 25.3 3.4E+02 0.0073 28.8 8.8 83 202-285 57-143 (573)
295 PRK09192 acyl-CoA synthetase; 25.0 4.9E+02 0.011 27.6 10.1 85 201-286 48-143 (579)
296 PRK07769 long-chain-fatty-acid 24.9 8.9E+02 0.019 26.1 12.8 84 201-285 54-143 (631)
297 PRK09082 methionine aminotrans 24.9 7E+02 0.015 24.8 13.0 150 49-224 101-270 (386)
298 PRK08162 acyl-CoA synthetase; 24.8 3.2E+02 0.007 28.7 8.6 83 202-285 43-129 (545)
299 PRK09088 acyl-CoA synthetase; 24.8 5.7E+02 0.012 26.3 10.3 77 202-279 22-102 (488)
300 TIGR02370 pyl_corrinoid methyl 24.8 5E+02 0.011 23.1 9.7 85 36-120 48-144 (197)
301 PF02350 Epimerase_2: UDP-N-ac 24.7 4.8E+02 0.01 25.7 9.0 96 41-149 48-152 (346)
302 PRK07786 long-chain-fatty-acid 24.6 4.1E+02 0.0088 28.0 9.3 82 202-284 42-127 (542)
303 PRK07867 acyl-CoA synthetase; 24.4 8.3E+02 0.018 25.6 11.6 93 27-123 150-253 (529)
304 cd01529 4RHOD_Repeats Member o 24.2 3.1E+02 0.0068 20.6 6.2 50 38-90 33-82 (96)
305 PRK13383 acyl-CoA synthetase; 24.1 4.1E+02 0.0088 27.7 9.1 84 202-286 60-147 (516)
306 PF06564 YhjQ: YhjQ protein; 24.1 5E+02 0.011 24.1 8.3 80 19-99 67-152 (243)
307 TIGR02898 spore_YhcN_YlaJ spor 24.1 4.3E+02 0.0093 22.6 7.3 24 452-475 56-79 (158)
308 PRK08526 threonine dehydratase 24.0 7E+02 0.015 25.2 10.1 101 22-127 28-130 (403)
309 PRK09162 hypoxanthine-guanine 23.9 2.1E+02 0.0045 25.1 5.7 50 37-88 14-63 (181)
310 COG0436 Aspartate/tyrosine/aro 23.9 7.5E+02 0.016 24.9 12.5 69 48-118 70-141 (393)
311 cd02067 B12-binding B12 bindin 23.6 3.7E+02 0.0081 21.3 7.5 55 78-132 17-74 (119)
312 cd02070 corrinoid_protein_B12- 23.4 5.3E+02 0.012 22.9 11.6 90 225-316 84-182 (201)
313 PF00818 Ice_nucleation: Ice n 23.3 40 0.00087 16.2 0.6 9 327-335 1-9 (16)
314 TIGR02304 aden_form_hyp probab 23.3 8.1E+02 0.018 25.0 10.7 85 59-149 138-222 (430)
315 TIGR01124 ilvA_2Cterm threonin 23.3 7.3E+02 0.016 26.0 10.4 100 19-123 22-123 (499)
316 PRK12483 threonine dehydratase 23.1 6.4E+02 0.014 26.6 9.8 97 28-129 51-149 (521)
317 PTZ00297 pantothenate kinase; 23.1 5E+02 0.011 31.5 9.9 86 38-128 619-706 (1452)
318 PRK08246 threonine dehydratase 23.1 6.8E+02 0.015 24.1 9.6 59 63-122 67-125 (310)
319 PRK07514 malonyl-CoA synthase; 23.0 4.5E+02 0.0098 27.1 9.2 84 201-285 27-114 (504)
320 PLN02574 4-coumarate--CoA liga 22.9 7.1E+02 0.015 26.3 10.8 84 202-286 66-154 (560)
321 PTZ00216 acyl-CoA synthetase; 22.8 5.2E+02 0.011 28.4 9.9 87 199-286 118-208 (700)
322 cd00615 Orn_deC_like Ornithine 22.7 3.1E+02 0.0068 26.1 7.2 55 61-118 96-161 (294)
323 KOG1175 Acyl-CoA synthetase [L 22.5 5.8E+02 0.013 27.5 9.4 96 182-281 79-178 (626)
324 COG2221 DsrA Dissimilatory sul 22.3 87 0.0019 30.0 3.1 91 423-523 52-142 (317)
325 PRK10877 protein disulfide iso 22.1 6.2E+02 0.013 23.2 9.6 48 422-474 55-105 (232)
326 TIGR01747 diampropi_NH3ly diam 21.9 8.1E+02 0.018 24.5 12.4 109 15-124 23-153 (376)
327 cd01563 Thr-synth_1 Threonine 21.8 3.9E+02 0.0084 26.0 7.8 89 29-123 38-128 (324)
328 PRK12406 long-chain-fatty-acid 21.8 4.2E+02 0.0091 27.5 8.6 84 202-286 11-98 (509)
329 PF00036 EF-hand_1: EF hand; 21.7 87 0.0019 17.8 1.9 21 527-547 9-29 (29)
330 PRK10287 thiosulfate:cyanide s 21.7 3.1E+02 0.0068 21.4 5.7 50 38-94 41-90 (104)
331 cd01137 PsaA Metal binding pro 21.6 5.1E+02 0.011 24.7 8.3 88 42-129 152-244 (287)
332 cd01562 Thr-dehyd Threonine de 21.5 6.5E+02 0.014 24.0 9.3 98 21-123 24-123 (304)
333 cd01016 TroA Metal binding pro 21.3 4.7E+02 0.01 24.7 8.0 86 43-130 137-229 (276)
334 PF01276 OKR_DC_1: Orn/Lys/Arg 20.8 4.2E+02 0.009 26.9 7.7 96 12-121 64-179 (417)
335 PRK08751 putative long-chain f 20.7 4.6E+02 0.01 27.6 8.8 83 202-285 50-137 (560)
336 cd06447 D-Ser-dehyd D-Serine d 20.6 4.9E+02 0.011 26.3 8.2 59 68-126 137-195 (404)
337 PRK09545 znuA high-affinity zi 20.6 7.8E+02 0.017 23.8 10.9 85 42-130 180-271 (311)
338 PRK06207 aspartate aminotransf 20.6 8.8E+02 0.019 24.4 13.7 145 61-224 123-285 (405)
339 PRK06178 acyl-CoA synthetase; 20.5 5.2E+02 0.011 27.3 9.1 84 202-286 58-145 (567)
340 PRK05939 hypothetical protein; 20.5 3.3E+02 0.0072 27.5 7.1 66 50-118 73-138 (397)
341 cd01017 AdcA Metal binding pro 20.4 7.4E+02 0.016 23.4 9.3 87 42-130 148-239 (282)
342 PRK08813 threonine dehydratase 20.2 8.5E+02 0.018 24.1 10.1 82 38-124 59-140 (349)
343 cd01448 TST_Repeat_1 Thiosulfa 20.1 2.4E+02 0.0053 22.4 5.1 41 50-90 65-106 (122)
344 PRK07671 cystathionine beta-ly 20.0 8.8E+02 0.019 24.2 11.4 51 69-119 69-121 (377)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.4e-82 Score=632.70 Aligned_cols=517 Identities=41% Similarity=0.657 Sum_probs=446.3
Q ss_pred cccccccCCCCCHHHHHHHHHHHcCCc-eEEEeCC---eeeeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCChHHH
Q 038104 4 LSKCEANYVPLSPLTFLKRAAAVYGNR-TSIIYEG---ARFNWLQTYDRCRRLASSLRSLN--MPKHSVVSVLAPNIPAM 77 (567)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~el~~~v~~la~~L~~~g--~~~gd~V~i~~~~~~~~ 77 (567)
+-+++.+..+.+....+.+.+..++++ +.+++.. +.+||.|+++++.++|..|.++| +++||+|++++||++++
T Consensus 6 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~ 85 (537)
T KOG1176|consen 6 LWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF 85 (537)
T ss_pred cccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH
Confidence 444556777777777777777666666 7777755 99999999999999999999875 89999999999999999
Q ss_pred HHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCC--CC
Q 038104 78 YEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSP--TG 155 (567)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--~~ 155 (567)
+.+++||+..|+++.++||.+.+.++.+.++.++++++|++.+..+++.++...+. ..++++...... ..
T Consensus 86 ~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~--------~~i~~l~~~~~~~~~~ 157 (537)
T KOG1176|consen 86 VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA--------LKIIVLTGDEGVISIS 157 (537)
T ss_pred HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC--------CceEEEecccCccccc
Confidence 99999999999999999999999999999999999999999999999988766432 445555443111 11
Q ss_pred ccCCccc-HHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchH
Q 038104 156 IRFGEFE-YEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMF 234 (567)
Q Consensus 156 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~ 234 (567)
....... +..+.....+.. ....+.++++.++|||||||.||||.++|++++.+.........+...|+.++.+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~ 235 (537)
T KOG1176|consen 158 DLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLF 235 (537)
T ss_pred cccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHH
Confidence 1111222 444444443333 3446779999999999999999999999999999888877777888899999999999
Q ss_pred hhhhHHHHHHHHhhCc-eeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHH
Q 038104 235 HCNGWTFTWGVAARGG-TNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASL 313 (567)
Q Consensus 235 ~~~g~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~ 313 (567)
|.+|+..++.+.+.++ ++++...++++.+++.|++|++|++.++|.++..|++.+.....++++++.+.+||+++++++
T Consensus 236 H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~ 315 (537)
T KOG1176|consen 236 HIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPAT 315 (537)
T ss_pred HHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHH
Confidence 9999999888665555 455556679999999999999999999999999999988777789999999999999999999
Q ss_pred HHHHH-HhC-CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeE
Q 038104 314 LEEIE-LLG-FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGE 391 (567)
Q Consensus 314 ~~~~~-~~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Ge 391 (567)
.+++. .++ ..+.+.||+||+++.++.+.+.+. ....++|.++++. ...+.+ +++...+.+ +.||
T Consensus 316 ~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~-e~g~~l~~~--~~GE 381 (537)
T KOG1176|consen 316 LEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLD-ETGVSLGPN--QTGE 381 (537)
T ss_pred HHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeC-CCCCCCCCC--CceE
Confidence 99998 566 899999999999988888754321 4557899999954 544444 588888887 7799
Q ss_pred EEEecCccchhccCChhhhhhcccC-CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEE
Q 038104 392 IVLRGSSIMKGYLKNEEATSQSFKN-GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAV 470 (567)
Q Consensus 392 l~v~~~~~~~gy~~~~~~~~~~~~~-~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 470 (567)
||++|++++.||++||+.|.+.|++ |||+|||+|++|+||+|++.+|++|+||++|++|+|.|||++|..||.|.|++|
T Consensus 382 I~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaV 461 (537)
T KOG1176|consen 382 ICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAV 461 (537)
T ss_pred EEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEE
Confidence 9999999999999999999999986 999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhc
Q 038104 471 VAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAV 549 (567)
Q Consensus 471 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~ 549 (567)
|+.+++.+|+.++|+|+.+++. ...+++|.++++++++.|++|..++|+++||+|++||++|+.||+++.+...
T Consensus 462 vgipDe~~Ge~p~A~VV~k~g~-----~lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 462 VGIPDEVWGETPAAFVVLKKGS-----TLTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred EcccccccCCcceEEEEecCCC-----cCCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhccc
Confidence 9999999999999999999866 8899999999999999999999999999999999999999999999988643
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=5.7e-78 Score=562.10 Aligned_cols=519 Identities=27% Similarity=0.404 Sum_probs=456.4
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYE--GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
+..-.|+.+.++..+++.||+.|.++. +.++||+|+.+.++.+|.+|...|+++||+|++..||+.+|+...|||.++
T Consensus 46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 344569999999999999999998884 568999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEccc-----chHHHHHHhhhhhcccc-------CCCCCeEEEEeCCCCCCC
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQ-----YVQLAREALKLYFVEDR-------DAAGPRVILIDDIDSPTG 155 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~~-------~~~~~~ii~~~~~~~~~~ 155 (567)
|.+.+++||.+...++++.|++.+++++|+.+. +...+.++..+...... .+...+++..++...
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~--- 202 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHP--- 202 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCc---
Confidence 999999999999999999999999999999754 34556666554433221 123456666664332
Q ss_pred ccCCcccHHHHHhcCCCCCCCC-----CCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEe
Q 038104 156 IRFGEFEYEQFVQMGDPRFLPE-----EIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWS 230 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 230 (567)
..+.+.+++++.....+.... ....+|+++.|.|||||||.|||+.+||-++++++......++++..+++++.
T Consensus 203 -~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~ 281 (596)
T KOG1177|consen 203 -LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIP 281 (596)
T ss_pred -CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEec
Confidence 246788888887666532221 22556899999999999999999999999999999999999999999999999
Q ss_pred cchHhhhhHH-HHHHHHhhCceeeee-CCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCC
Q 038104 231 LPMFHCNGWT-FTWGVAARGGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAP 308 (567)
Q Consensus 231 ~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~ 308 (567)
.|++|.+|.. ..+.++..|+++++. +.+++...+++|+++++|.++++|+++.-|++.......++++++..+.||++
T Consensus 282 ~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~ 361 (596)
T KOG1177|consen 282 NPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAP 361 (596)
T ss_pred CchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCC
Confidence 9999999965 477888899999995 57899999999999999999999999999999998899999999999999999
Q ss_pred CCHHHHHHHH-HhCC-eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 309 PPASLLEEIE-LLGF-HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 309 l~~~~~~~~~-~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
+++++.+.+. +.+. .+...||+||+++..+... +.+.......++|...+.. +..++| ..+..++.+
T Consensus 362 ~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~--------~~D~~~~~~ksVG~~m~h~-Ea~iv~-~~g~~v~~~- 430 (596)
T KOG1177|consen 362 VSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL--------LGDPPEERIKSVGHLMDHY-EAAIVD-KDGSEVPLG- 430 (596)
T ss_pred CCHHHHHHHHHhhCceeeEEEeeccccCcceeeec--------CCCCHHHHHhhhhhccccc-cccccc-CCCCccccC-
Confidence 9999999988 4554 4788999999998877653 3344455556889888887 889999 588999998
Q ss_pred cceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCc
Q 038104 387 KTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRV 465 (567)
Q Consensus 387 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 465 (567)
..||||++|...+.|||++++.|.+... +.||+|||.|.+|++|.++++||++|+|+.+|++|+|.+||+.|.++|.|
T Consensus 431 -~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V 509 (596)
T KOG1177|consen 431 -TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLV 509 (596)
T ss_pred -CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCe
Confidence 6699999999999999999999988875 78999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 466 LEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 466 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
.++.|++++++..|+.++|+|.+..+..+ ....++|+++|+.++..|++|+.|+++++||+|.+|||+|.++|++.+
T Consensus 510 ~~a~VVGV~D~R~GE~VCA~vRLqe~~e~---~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 510 KEAHVVGVPDERLGEEVCACVRLQEGAEG---KTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred eeEEEEccCCCcccceEEEEEEeeccccc---cccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHH
Confidence 99999999999999999999999988744 368999999999999999999999999999999999999999999998
Q ss_pred hh
Q 038104 546 NF 547 (567)
Q Consensus 546 ~~ 547 (567)
..
T Consensus 587 ~~ 588 (596)
T KOG1177|consen 587 GH 588 (596)
T ss_pred hh
Confidence 54
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2e-77 Score=597.76 Aligned_cols=494 Identities=26% Similarity=0.360 Sum_probs=421.8
Q ss_pred HHHHHHH-HcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 19 FLKRAAA-VYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 19 ~l~~~a~-~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
.++++.. ..+|+.|+++.+ +++||+||++.++++|+.|++ .|+ +||+|+|++|+.+++++++|||+++|++.
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 4666665 347899999864 689999999999999999987 678 99999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCC
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGD 171 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
+++.+.++++.+.+++++++++++|+.+......+.......... ....+++..... ..|.++....+
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~---~~~~~iv~~r~~---------~~~~~~~~~~~ 160 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADA---VLSSVVVVPRLG---------LWYDEAVEKAS 160 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHH---hhcceEEecccc---------ccHHHHhhccC
Confidence 999999999999999999999999998776554332211110000 001133333221 56777776655
Q ss_pred CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh-hhccCCCCCEEEEecchHhhhhHHH-HHHHHhhC
Q 038104 172 PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI-LGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARG 249 (567)
Q Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g 249 (567)
....+.. .+.+|+++++|||||||+||+|+++|+.+........ ..+.+.++|++++..++.|++|..+ ++.++..|
T Consensus 161 ~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~G 239 (528)
T COG0365 161 EKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASG 239 (528)
T ss_pred CCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcC
Confidence 5554444 7889999999999999999999999998777665544 4667889999999999999999987 88899999
Q ss_pred ceeeeeCC--C-CHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeee
Q 038104 250 GTNVCLRN--T-TAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVT 325 (567)
Q Consensus 250 ~~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~ 325 (567)
+++++.+. + +++.+++.|+++++|.+++.|+.+++|++........+++||.+.+.||+++++.++++. .+|++|.
T Consensus 240 at~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~ 319 (528)
T COG0365 240 ATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWIL 319 (528)
T ss_pred CeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHhCCCEe
Confidence 99998853 2 489999999999999999999999999998766677899999999999999999999998 5699999
Q ss_pred ccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecC--ccchhc
Q 038104 326 HAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGS--SIMKGY 403 (567)
Q Consensus 326 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~gy 403 (567)
+.||+||+++++.... + ...+.+.|.|+++. .++++|.+ +++++.+ + |+|+++.+ .++++|
T Consensus 320 d~~gqTEtg~~~~~~~--------~----~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~p~~~~~~ 382 (528)
T COG0365 320 DIYGQTETGMGFIAGR--------P----PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPWPGMALTY 382 (528)
T ss_pred ccccccccCccccCCC--------C----CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCCchhhhhh
Confidence 9999999996555432 1 11234449999999 99999987 8888887 7 99999987 889999
Q ss_pred cCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCcee
Q 038104 404 LKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPC 483 (567)
Q Consensus 404 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (567)
|+|++++.+.+.+.||.|||.+++|+||+++|.||.||+||+.|+++.|.|||++|.+||.|.||+|++.+++..|+.++
T Consensus 383 w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~ 462 (528)
T COG0365 383 WNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVL 462 (528)
T ss_pred hCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEE
Confidence 99999999998877999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 484 AFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 484 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+||+++++... ....++|++++++.+.+++.|++|.+|++||||.||||+|+.||+.+.+
T Consensus 463 afVvL~~g~~~---~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 463 AFVVLAAGVEP---NELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred EEEEecCCCCh---HHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 99999988732 1345778888888888899999999999999999999999999999886
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-76 Score=616.71 Aligned_cols=512 Identities=32% Similarity=0.480 Sum_probs=440.5
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCCee--eeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEGAR--FNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~--~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
...++++++.+++.++++.+|+++|+.+.+.. +||+||.++++++|.+|++.|+++||+|+|+++|++++++++|||+
T Consensus 5 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 5 MRMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred ccccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 34567889999999999999999999998876 9999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHH
Q 038104 86 MAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQ 165 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 165 (567)
++|++++|+||.++..++.++++.++++.++++.+..+.+........ ....+........... ..+.+
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~~~~~ 153 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP------VVLVVLLVGDADDRLP-----ITLEA 153 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC------cceEEEeccccccccc-----ccHHH
Confidence 999999999999999999999999999999999885555444433211 1122222221111100 24555
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc--CCCCCEEEEecchHhhhhHHHHH
Q 038104 166 FVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE--MGSAPVYLWSLPMFHCNGWTFTW 243 (567)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~~~~~ 243 (567)
...............+++++++++|||||||.||+|++||++++.+.......++ ++..|++++.+|++|.+|+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~ 233 (534)
T COG0318 154 LAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGL 233 (534)
T ss_pred HhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHH
Confidence 5433333333332257889999999999999999999999999999888888888 89999999999999999999766
Q ss_pred HH-HhhCceeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCC-ceEEEEcCCCCCHHHHHHHH-
Q 038104 244 GV-AARGGTNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIAS-PVQILTGGAPPPASLLEEIE- 318 (567)
Q Consensus 244 ~~-~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~-l~~~~~~g~~l~~~~~~~~~- 318 (567)
.+ ++.|++.++.. .+++..++..+.++++|++.++|+++..|+.........+++ +|.++.||+++++++.+++.
T Consensus 234 ~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~ 313 (534)
T COG0318 234 LAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEE 313 (534)
T ss_pred HHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHH
Confidence 65 77788888877 589999999999999999999999999999988777666666 99999999999999999999
Q ss_pred HhC-CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecC
Q 038104 319 LLG-FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGS 397 (567)
Q Consensus 319 ~~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~ 397 (567)
.++ ..+...||+||+++.++.+.... . ......+|.|.++. +++|+|.+++.+.| + ++|||+++||
T Consensus 314 ~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei~irgp 380 (534)
T COG0318 314 RFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEIWVRGP 380 (534)
T ss_pred HhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEEEEECc
Confidence 666 57999999999998777654221 0 23345569999998 99999987775555 4 7899999999
Q ss_pred ccchhccCChhhhhhcccC-CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCC
Q 038104 398 SIMKGYLKNEEATSQSFKN-GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHP 476 (567)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~-~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 476 (567)
+++.|||++|+.|.+.|.+ |||+|||+|++|++|++++.||.+|+|+++|++|+|.+||.++.++|.|.+++|++++++
T Consensus 381 ~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~ 460 (534)
T COG0318 381 NVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDE 460 (534)
T ss_pred hhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCC
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 477 QWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 477 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
.+|++++++|+..++.. ...+.++|.++++++++.|++|+.+++++++|+|++||++|+.|++++.+
T Consensus 461 ~~Ge~~~a~v~~~~~~~---~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 461 RWGERVVAVVVLKPGGD---AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred ccCceEEEEEEEcCCCC---CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999987632 14489999999999999999999999999999999999999999999988
No 5
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-75 Score=532.65 Aligned_cols=504 Identities=29% Similarity=0.412 Sum_probs=451.8
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
|++.|+.+++.++|.++||++|+++.++++||+||.++++++|..|+++|+++||+|.+.+||..+|++++||++++|+.
T Consensus 25 W~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~ 104 (542)
T COG1021 25 WQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVA 104 (542)
T ss_pred ccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEccc-----chHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHH
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQ-----YVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQ 165 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 165 (567)
+|.--|.....+|.+..+...++.+|++.. ..+..++.+...+ ..+.+++.++...+. ....
T Consensus 105 PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~------tlr~v~v~ge~~~~~-------~~~~ 171 (542)
T COG1021 105 PVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP------TLRHVIVAGEAEHPS-------VLEA 171 (542)
T ss_pred hhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC------cceEEEEccCCCCcc-------hhhh
Confidence 999999999999999999999999999764 3455555555443 556777765443221 1222
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH--HH
Q 038104 166 FVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF--TW 243 (567)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~--~~ 243 (567)
.+........+..+.+.++++++.-+.||||.||.|..+|+....+.....+..++...+++++.+|..|.+.+++ .+
T Consensus 172 ~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 172 ALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred hhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchh
Confidence 3333444444555577889999999999999999999999999999999999999999999999999999999875 78
Q ss_pred HHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCC
Q 038104 244 GVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGF 322 (567)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~ 322 (567)
+.++.|+++|+.++.+++..+.+|+++++|+...+|.....+++..+.....++|||.+-+||+.++++..+++. .++|
T Consensus 252 Gv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lgC 331 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLGC 331 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998 7799
Q ss_pred eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchh
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKG 402 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 402 (567)
.+-+.|||.|.-...+. ++ +..+......|+|+.+..+++|+|. +++++++| |.|+|..+||+-++|
T Consensus 332 ~LQQVFGMAEGLvnyTR---------LD-Dp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~LltRGPYTirG 398 (542)
T COG1021 332 QLQQVFGMAEGLVNYTR---------LD-DPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGELLTRGPYTIRG 398 (542)
T ss_pred hHHHHhhhhhhhhcccc---------cC-CchHheeecCCCcCCCcceeEEecC-CCCCCCCC--CcceeeecCCeeeee
Confidence 99999999997533332 11 2234445678999999999999997 78888888 889999999999999
Q ss_pred ccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCc
Q 038104 403 YLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGES 481 (567)
Q Consensus 403 y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (567)
||+.|+.+.++|+ +|||+|||+++++++|++.+.||.+|+|+.+|++|-.+|||+.|.+||.|.++++|+++++-.|++
T Consensus 399 Yyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEk 478 (542)
T COG1021 399 YYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEK 478 (542)
T ss_pred eccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcc
Confidence 9999999999997 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 482 PCAFISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 482 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
.+++|+.++. .....++++++++. +..|++|++|.+|+++|.|+-|||+|+.|++++..
T Consensus 479 sCAfiv~~~~------~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 479 SCAFIVVKEP------PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred eeEEEEecCC------CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhh
Confidence 9999999876 47889999999875 89999999999999999999999999999988764
No 6
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.1e-72 Score=597.66 Aligned_cols=548 Identities=65% Similarity=1.091 Sum_probs=442.7
Q ss_pred CcccccccccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHH
Q 038104 1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEM 80 (567)
Q Consensus 1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~ 80 (567)
|+-+-.|.+.-++.|+.+++.+.++.+|+++|+.+.+.++||+||.++++++|+.|.++|+++||+|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~ 80 (579)
T PLN03102 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEM 80 (579)
T ss_pred CCCccCCccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Confidence 45566788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCc
Q 038104 81 HFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGE 160 (567)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 160 (567)
+|||+++|++++|+++.++.+++.++++.++++++|++.+....+.++.......... ....++.+++...........
T Consensus 81 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 159 (579)
T PLN03102 81 HFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSN-LNLPVIFIHEIDFPKRPSSEE 159 (579)
T ss_pred HHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccc-cCceEEEecccccccCCcccc
Confidence 9999999999999999999999999999999999999988777666654433211000 123455554322111111123
Q ss_pred ccHHHHHhcCCCCCCC----CCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhh
Q 038104 161 FEYEQFVQMGDPRFLP----EEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHC 236 (567)
Q Consensus 161 ~~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 236 (567)
..|.++.......... ......+++++++|||||||.||+|.++|+++..........+.++..++++..+|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 239 (579)
T PLN03102 160 LDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHC 239 (579)
T ss_pred cCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhh
Confidence 4566665443322111 112456899999999999999999999999976555555455567778899999999999
Q ss_pred hhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHH
Q 038104 237 NGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 237 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~ 316 (567)
.++...+.++..|+++++...+++..+++.|+++++|++.++|+++..|++.........++++.+++||+++++.+.+.
T Consensus 240 ~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~ 319 (579)
T PLN03102 240 NGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKK 319 (579)
T ss_pred cchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHH
Confidence 99887778888999999998889999999999999999999999999998865434344567888999999999999999
Q ss_pred HHHhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEec
Q 038104 317 IELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRG 396 (567)
Q Consensus 317 ~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~ 396 (567)
++.+++++++.||+||+++.++.+..+..+...+...........|.+..+...+++++.+.+.+++.++++.|||+++|
T Consensus 320 ~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl~v~g 399 (579)
T PLN03102 320 VQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEIVIKG 399 (579)
T ss_pred HHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCceEEEEEC
Confidence 98889999999999999876554432222211111111111123444444444677887766666765444679999999
Q ss_pred CccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCC
Q 038104 397 SSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHP 476 (567)
Q Consensus 397 ~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 476 (567)
+.++.||+++++.+.+.|.+|||+|||+|++|++|.+++.||.+|+|+.+|.+|+|.+||.+|.++|.|.+++|++++++
T Consensus 400 ~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~ 479 (579)
T PLN03102 400 SSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHP 479 (579)
T ss_pred cchhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEeecCCCCCCC-----CCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhc
Q 038104 477 QWGESPCAFISVKTNSAGKTD-----DVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAV 549 (567)
Q Consensus 477 ~~g~~~~~~v~~~~~~~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~ 549 (567)
..|+.++++|+..++...... .....+++++++++|+.|++|..++++++||+|++||++|++|++++.++..
T Consensus 480 ~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~~~~ 557 (579)
T PLN03102 480 TWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKGLVV 557 (579)
T ss_pred cccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHHhhh
Confidence 989999999988765321000 1135789999999999999999999999999999999999999999877543
No 7
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-71 Score=587.38 Aligned_cols=496 Identities=25% Similarity=0.340 Sum_probs=424.7
Q ss_pred CHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeec
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTI 94 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (567)
|+.+++++.++++||++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCC
Q 038104 95 NVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRF 174 (567)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++.++.+++.++++.++++++|++.+....+.++..... ....++....... ........+.++........
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 201 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG------RLRAWGGNPDDDE--PSGSTDETLDDLIAGSSTAP 201 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc------cceEEEEecCccc--cCCcCcccHHHHhcCCCCCC
Confidence 999999999999999999999999887666654322111 1112221111111 11234456777665433222
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeee
Q 038104 175 LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVC 254 (567)
Q Consensus 175 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~ 254 (567)
. ....+++++++|||||||.||+|.++|+++..........+++..+|+++...|++|.+|+...+.++..|+++++
T Consensus 202 ~---~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~ 278 (549)
T PRK07788 202 L---PKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVL 278 (549)
T ss_pred C---CCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEE
Confidence 1 1335678999999999999999999999998887777777888999999999999999999877888899999998
Q ss_pred eCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeecccccc
Q 038104 255 LRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLT 331 (567)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~t 331 (567)
...+++..+++.++++++|++.++|+++..+++.... ....+++++.+++||+++++++.+.+. .++.++++.||+|
T Consensus 279 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 358 (549)
T PRK07788 279 RRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGST 358 (549)
T ss_pred CCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcc
Confidence 8888999999999999999999999999999887654 445678999999999999999999998 5688999999999
Q ss_pred ccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhh
Q 038104 332 EATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATS 411 (567)
Q Consensus 332 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 411 (567)
|++..++.+. .........+|.|.++. .++++|. .+.+++.| +.|||+++|+.++.||++++..
T Consensus 359 E~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~-- 422 (549)
T PRK07788 359 EVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGYTDGRDK-- 422 (549)
T ss_pred hhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccccCCCcc--
Confidence 9986554322 11112235789999998 8999986 56677776 8899999999999999998765
Q ss_pred hcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecC
Q 038104 412 QSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTN 491 (567)
Q Consensus 412 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 491 (567)
...+|||+|||+|+++++|.+++.||.||+|+++|++|+|.+||++|.++|+|.+++|++++++..|++++++|+..++
T Consensus 423 -~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~ 501 (549)
T PRK07788 423 -QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPG 501 (549)
T ss_pred -cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCC
Confidence 3347999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 492 SAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 492 ~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
. ..+.++++++++++++.|++|..++++++||+|++||++|++|+++
T Consensus 502 ~-----~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 502 A-----ALDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred C-----CCCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 4 5678999999999999999999999999999999999999999753
No 8
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=6.7e-71 Score=583.25 Aligned_cols=526 Identities=26% Similarity=0.312 Sum_probs=422.5
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
+++++.++.++|.+.++++|+++|+++.++++||+||.++++++|++|.++|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 46789999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhh-hhhccccCCCCCeEEEEeCCCCCCCc-cCCcccHHHH
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALK-LYFVEDRDAAGPRVILIDDIDSPTGI-RFGEFEYEQF 166 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~ 166 (567)
++++|+++.++.+++.++++.+++++++++.+.......... ... ....++..++....... ......+.++
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLP------SLMWQVFLESPSSSVFIFLNSFLTTEML 155 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCC------ceeEEEEecCcccccccchhhccccchh
Confidence 999999999999999999999999999998765433332211 010 12223333321100000 0000111111
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHH
Q 038104 167 VQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVA 246 (567)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 246 (567)
...............++++++++|||||||.||+|.++|+++..+.......+++.++|+++...|++|.+|+...+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l 235 (563)
T PLN02860 156 KQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAML 235 (563)
T ss_pred ccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHH
Confidence 11100010111124568999999999999999999999999987777766677889999999999999999998888899
Q ss_pred hhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHHH-h-CC
Q 038104 247 ARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIEL-L-GF 322 (567)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~ 322 (567)
..|+++++.+.+++..+++.|+++++|++.++|+++..|++.... ....++++|.+++||+++++++.+.+++ + ++
T Consensus 236 ~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~ 315 (563)
T PLN02860 236 MVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNA 315 (563)
T ss_pred HcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999876432 2245779999999999999999999984 4 78
Q ss_pred eeeccccccccCCCccccccccccCC-C-----------CCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCccee
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQ-L-----------PKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMG 390 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~G 390 (567)
++++.||+||+++.+........... . ..........++|.|+++. .+++++.+ .+ +.|
T Consensus 316 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g--~~G 386 (563)
T PLN02860 316 KLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS--RVG 386 (563)
T ss_pred ceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC--cee
Confidence 99999999999865544322111000 0 0000011123579999988 88888764 23 789
Q ss_pred EEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEE
Q 038104 391 EIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAA 469 (567)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 469 (567)
||+++|+.++.||+++++.+.+.+. +|||+|||+|+++++|.+++.||.+|+|+++|++|+|.+||.++.++|+|.+++
T Consensus 387 el~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~ 466 (563)
T PLN02860 387 RILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVV 466 (563)
T ss_pred EEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeE
Confidence 9999999999999999999988875 799999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCceeEEEEeecCCCC---------CCCCCCHHHHHHHHHh-hCCCCccccEEEEe-CCCCCCCCCccchH
Q 038104 470 VVAMPHPQWGESPCAFISVKTNSAG---------KTDDVNEADILSYCRE-NLSRFMVPKKVVIL-PELPKTATGKIQKF 538 (567)
Q Consensus 470 v~~~~~~~~g~~~~~~v~~~~~~~~---------~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v-~~~P~t~~GKv~r~ 538 (567)
|++++++..|+.++++|++.++... .....+.+++++++++ .|+.|++|+.++++ ++||+|++||++|+
T Consensus 467 v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~ 546 (563)
T PLN02860 467 VVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRD 546 (563)
T ss_pred EEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHH
Confidence 9999999999999999998765210 0113566889999987 59999999998765 67999999999999
Q ss_pred HHHHHHHhhhc
Q 038104 539 QLRALAKNFAV 549 (567)
Q Consensus 539 ~l~~~~~~~~~ 549 (567)
+|++++.+...
T Consensus 547 ~L~~~~~~~~~ 557 (563)
T PLN02860 547 EVRREVLSHLQ 557 (563)
T ss_pred HHHHHHHHHHh
Confidence 99998876543
No 9
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.9e-71 Score=589.23 Aligned_cols=509 Identities=21% Similarity=0.299 Sum_probs=408.3
Q ss_pred HHHHHHHHHH--cCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 17 LTFLKRAAAV--YGNRTSIIYE------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 17 ~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.++++++++. +|+++|+++. .+++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~G 141 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIG 141 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 4577777754 7999999873 3689999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEccc---------chHHHHHHhhhhhccccCCCCCeEEEEeCCCC-------
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQ---------YVQLAREALKLYFVEDRDAAGPRVILIDDIDS------- 152 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~------- 152 (567)
++++|+++.++.+++.+++++++++++|++.. ..+.+.++..... .....++.+.....
T Consensus 142 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~vi~~~~~~~~~~~~~~ 216 (647)
T PTZ00237 142 ATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELST-----FKPSNVITLFRNDITSESDLK 216 (647)
T ss_pred cEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhccc-----CCCCEEEEEEcCCcccccccc
Confidence 99999999999999999999999999999752 2233333332110 01234444321110
Q ss_pred ---CCCccCCcccHHHHHhcCC----CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHH-HHHhhHhhhhccCCCC
Q 038104 153 ---PTGIRFGEFEYEQFVQMGD----PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGA-YLSTLSLILGWEMGSA 224 (567)
Q Consensus 153 ---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l-~~~~~~~~~~~~~~~~ 224 (567)
..........|.+++.... ..........++++++++|||||||.||+|+++|.+. ..........+....+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~ 296 (647)
T PTZ00237 217 KIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIP 296 (647)
T ss_pred cccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCC
Confidence 0000112345666654321 1111122356789999999999999999999999984 3333333344567788
Q ss_pred CEEEEecchHhhhhHHHHHHHHhhCceeeeeCCC--C----HHHHHHHHHhcCcceeecchHHHHHHHhcCCc-----cc
Q 038104 225 PVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNT--T----AYDMYRNISQHRVTHMCCAPIVFNILLQAKPE-----ER 293 (567)
Q Consensus 225 d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~--~----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-----~~ 293 (567)
|++++..|++|+.+...++.+++.|+++++.+.. . +..+++.|+++++|++.++|++++.|++.... ..
T Consensus 297 d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~ 376 (647)
T PTZ00237 297 TVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSK 376 (647)
T ss_pred cEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccc
Confidence 9999999999987766788899999999887641 2 67899999999999999999999999875422 23
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceE
Q 038104 294 KEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVD 372 (567)
Q Consensus 294 ~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 372 (567)
..++++|.++++|+++++++.++++ .+++++++.||+||+++.++.... ........+|.|+++. .++
T Consensus 377 ~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~----------~~~~~~~s~G~p~~g~-~~~ 445 (647)
T PTZ00237 377 YDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYG----------HINIPYNATGVPSIFI-KPS 445 (647)
T ss_pred cCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCC----------CCCCCCCCCccCcCCc-eEE
Confidence 4688999999999999999999988 569999999999999865543210 0111225789999998 899
Q ss_pred EeeCCCCCCcCCCCcceeEEEEecC---ccchhccCChhhhhhccc--CCcccCCceEEEecCCcEEEEccCCceeeeCc
Q 038104 373 VKNLDTMSSVPRDGKTMGEIVLRGS---SIMKGYLKNEEATSQSFK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGG 447 (567)
Q Consensus 373 i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G 447 (567)
|+|. ++.+++.+ +.|||++++| +++.|||++++.+.+.|. +|||+|||+|++|++|++++.||+||+|+++|
T Consensus 446 i~d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G 522 (647)
T PTZ00237 446 ILSE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISG 522 (647)
T ss_pred EECC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECC
Confidence 9986 67777776 7899999986 789999999999988775 79999999999999999999999999999999
Q ss_pred eeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCC----HHHHHHHHHhhCCCCccccEEEE
Q 038104 448 ENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVN----EADILSYCRENLSRFMVPKKVVI 523 (567)
Q Consensus 448 ~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~----~~~l~~~~~~~l~~~~~p~~i~~ 523 (567)
++|+|.+||++|.++|.|.+++|++++++..|+.++++|++.++.... ..+ .++|+++++++++.|++|+.|++
T Consensus 523 ~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~--~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~ 600 (647)
T PTZ00237 523 NKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQ--SIDLNKLKNEINNIITQDIESLAVLRKIII 600 (647)
T ss_pred EEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCcccc--CCCHHHHHHHHHHHHHhhcCccccCcEEEE
Confidence 999999999999999999999999999999999999999987543111 122 25678888999999999999999
Q ss_pred eCCCCCCCCCccchHHHHHHHHh
Q 038104 524 LPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 524 v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+++||+|++||++|+.|++++..
T Consensus 601 v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 601 VNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred cCCCCCCCCccEeHHHHHHHHcC
Confidence 99999999999999999999754
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.5e-70 Score=585.19 Aligned_cols=517 Identities=21% Similarity=0.270 Sum_probs=412.8
Q ss_pred CCCCH-HHHHHHHHH-HcCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 12 VPLSP-LTFLKRAAA-VYGNRTSIIYE------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 12 ~~~tl-~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
..+|+ .+++++++. .+|+++|+++. .+++||+||.++++++|++|++.|+++||+|++++||++++++++||
T Consensus 85 ~~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 85 GKTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred CEeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34556 457777775 48999999874 26899999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchH---------HHHHHhhhhhccccCCCCCeEEEEeCCCCC-
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQ---------LAREALKLYFVEDRDAAGPRVILIDDIDSP- 153 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~- 153 (567)
|+++|++++|+++.++.+++.++++.++++++|++..... .+.+++....... .....++........
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 242 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNG--VSVGICLTYENQLAMK 242 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccC--CCccEEEEeccccccc
Confidence 9999999999999999999999999999999999876432 2222222110000 011122222211100
Q ss_pred ---CC-ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHh-hHhhhhccCCCCCEEE
Q 038104 154 ---TG-IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLST-LSLILGWEMGSAPVYL 228 (567)
Q Consensus 154 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~-~~~~~~~~~~~~d~~~ 228 (567)
.. .......|.++....+. ..+......+++++++|||||||.||||+++|++++... ......++++++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~ 321 (666)
T PLN02654 243 REDTKWQEGRDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYW 321 (666)
T ss_pred ccccccccCCcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEE
Confidence 00 00112335554432221 112223567899999999999999999999999976443 4455567899999999
Q ss_pred EecchHhhhhHHH-HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceE
Q 038104 229 WSLPMFHCNGWTF-TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQ 301 (567)
Q Consensus 229 ~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~ 301 (567)
+..|++|..|..+ ++.+++.|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ....++++|.
T Consensus 322 ~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~ 401 (666)
T PLN02654 322 CTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRV 401 (666)
T ss_pred EcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeE
Confidence 9999999998765 6788899999999864 4789999999999999999999999999876532 3346789999
Q ss_pred EEEcCCCCCHHHHHHHH-HhC---CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCC
Q 038104 302 ILTGGAPPPASLLEEIE-LLG---FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLD 377 (567)
Q Consensus 302 ~~~~g~~l~~~~~~~~~-~~~---~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~ 377 (567)
++++|++++++..+++. .++ +++.+.||+||+++..+..... ........+|.|+++. .++|+|.
T Consensus 402 i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~i~d~- 470 (666)
T PLN02654 402 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGV-QPVIVDE- 470 (666)
T ss_pred EEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCC---------CCCCCCCccCCCCCCc-eEEEECC-
Confidence 99999999999999887 556 7899999999998766532110 0012235689999998 8999986
Q ss_pred CCCCcCCCCcceeEEEEec--CccchhccCChhhhhhcc---cCCcccCCceEEEecCCcEEEEccCCceeeeCceeech
Q 038104 378 TMSSVPRDGKTMGEIVLRG--SSIMKGYLKNEEATSQSF---KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISS 452 (567)
Q Consensus 378 ~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 452 (567)
.+.+++.+ +.|||++++ |.++.|||++++.+...+ .+|||+|||+|++|+||.++++||+||+|+++|++|+|
T Consensus 471 ~g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p 548 (666)
T PLN02654 471 KGKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGT 548 (666)
T ss_pred CCCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECH
Confidence 56666655 679999999 789999999999887765 27999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCC
Q 038104 453 VELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTAT 532 (567)
Q Consensus 453 ~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~ 532 (567)
.+||.+|.++|+|.+++|++++++..|+.++++|++.++... .....++|+++++++|+.|+.|+.|+++++||+|.+
T Consensus 549 ~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~--~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~s 626 (666)
T PLN02654 549 AEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPY--SEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRS 626 (666)
T ss_pred HHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCC--CHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCC
Confidence 999999999999999999999999999999999999876411 011235789999999999999999999999999999
Q ss_pred CccchHHHHHHHHh
Q 038104 533 GKIQKFQLRALAKN 546 (567)
Q Consensus 533 GKv~r~~l~~~~~~ 546 (567)
||++|+.|++.+..
T Consensus 627 GKi~r~~l~~~~~~ 640 (666)
T PLN02654 627 GKIMRRILRKIASR 640 (666)
T ss_pred cCchHHHHHHHHcC
Confidence 99999999999865
No 11
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-69 Score=579.16 Aligned_cols=511 Identities=29% Similarity=0.404 Sum_probs=421.6
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEe--------CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHH
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIY--------EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHF 82 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~--------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (567)
..|.|+.++|.+.|+++|+++|+.+ ..+++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 5678999999999999999999986 24799999999999999999999999999999999999999999999
Q ss_pred HhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccc-----hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCC--
Q 038104 83 AVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY-----VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTG-- 155 (567)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-- 155 (567)
||+++| +++|+++.++++++.++++.++++++|++... ...+.......+ ....++.++.......
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~ 174 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP------ELRTVVEVDLARYLPGPK 174 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC------cceeEEEecCcccccccc
Confidence 999999 56999999999999999999999999997543 334444333222 3455555543221100
Q ss_pred ----------ccCCcccHHHHHhcCCCCCC-CCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCC
Q 038104 156 ----------IRFGEFEYEQFVQMGDPRFL-PEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSA 224 (567)
Q Consensus 156 ----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~ 224 (567)
...+...|.+.....+.... .......+++++++|||||||.||+|.++|++++.++......+++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~ 254 (632)
T PRK07529 175 RLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPG 254 (632)
T ss_pred cccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCC
Confidence 11233456665554432211 1223466899999999999999999999999998887777777788999
Q ss_pred CEEEEecchHhhhhHHH-HHHHHhhCceeeeeCCC------CHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCC
Q 038104 225 PVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLRNT------TAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIA 297 (567)
Q Consensus 225 d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~------~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~ 297 (567)
|++++.+|++|.+++.. ++.++..|+++++.++. ....+++.++++++|++.++|+++..|++.... ...++
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~ 333 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDIS 333 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCcc
Confidence 99999999999998764 67788889998887532 135789999999999999999999999876532 34678
Q ss_pred CceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeC
Q 038104 298 SPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNL 376 (567)
Q Consensus 298 ~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~ 376 (567)
+++.+++||+++++++.++++ .+++++++.||+||++.++..+... .......+|.|+++. .++++..
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~~~ 402 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVVIL 402 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEEEc
Confidence 999999999999999999998 5699999999999998766543211 112335789999887 7888643
Q ss_pred CC-C---CCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeech
Q 038104 377 DT-M---SSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISS 452 (567)
Q Consensus 377 ~~-~---~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 452 (567)
+. + .+++.| +.|||+++|++++.||++++......+.+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|
T Consensus 403 d~~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p 480 (632)
T PRK07529 403 DDAGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDP 480 (632)
T ss_pred CCCCcccccCCCC--CceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECH
Confidence 32 3 556666 78999999999999999876544333368999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCC-CCccccEEEEeCCCCCCC
Q 038104 453 VELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLS-RFMVPKKVVILPELPKTA 531 (567)
Q Consensus 453 ~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~v~~~P~t~ 531 (567)
.+||++|.++|+|.+++|++.+++..|+.++++|++.++. ..+.++++++++++++ .+++|+.|+++++||+|.
T Consensus 481 ~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~-----~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~ 555 (632)
T PRK07529 481 AAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGA-----SATEAELLAFARDHIAERAAVPKHVRILDALPKTA 555 (632)
T ss_pred HHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCC-----CCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCC
Confidence 9999999999999999999999999999999999988765 5678899999999986 579999999999999999
Q ss_pred CCccchHHHHHHHHhh
Q 038104 532 TGKIQKFQLRALAKNF 547 (567)
Q Consensus 532 ~GKv~r~~l~~~~~~~ 547 (567)
+||++|++|++.+.+.
T Consensus 556 ~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 556 VGKIFKPALRRDAIRR 571 (632)
T ss_pred CCcccHHHHHHHHHHH
Confidence 9999999999988774
No 12
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.9e-70 Score=583.62 Aligned_cols=519 Identities=20% Similarity=0.248 Sum_probs=418.6
Q ss_pred CCCH-HHHHHHHHHHcCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 13 PLSP-LTFLKRAAAVYGNRTSIIYE------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 13 ~~tl-~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
.+|+ .+++++++..+|+++|+++. ++++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+
T Consensus 50 ~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~ 129 (628)
T TIGR02316 50 RTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACA 129 (628)
T ss_pred EeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3445 35788888889999999972 3689999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCChHHHHHHHHhcCceEEEEcccc---------hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCC-
Q 038104 86 MAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY---------VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTG- 155 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~- 155 (567)
++|++++|+++.++.+++.++++.++++++|++... ...+.+++.... .....++.++.......
T Consensus 130 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~vi~~~~~~~~~~~ 204 (628)
T TIGR02316 130 RIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ-----HPPPHVLLVDRGLAPMRL 204 (628)
T ss_pred HhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC-----CCCCEEEEEeCCCCCcCc
Confidence 999999999999999999999999999999997642 222333322111 12345666654321111
Q ss_pred ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHh-hHhhhhccCCCCCEEEEecchH
Q 038104 156 IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLST-LSLILGWEMGSAPVYLWSLPMF 234 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~-~~~~~~~~~~~~d~~~~~~p~~ 234 (567)
.......|.++.........+.....++++++++|||||||.||||+++|.++.... ......++++++|++++..|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 284 (628)
T TIGR02316 205 IPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVG 284 (628)
T ss_pred ccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCC
Confidence 111234566655443222222223467899999999999999999999999975443 3444567889999999999999
Q ss_pred hhhhHHH-HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCC
Q 038104 235 HCNGWTF-TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGA 307 (567)
Q Consensus 235 ~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~ 307 (567)
|..|+.+ ++.+++.|+++++.+. +++..+++.|+++++|+++++|++++.|.+.... ....++++|.+++||+
T Consensus 285 ~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 285 WVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 9998754 7788899999998763 4788999999999999999999999999876432 3456889999999999
Q ss_pred CCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 308 PPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 308 ~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
++++++.+++. .++.++++.||+||++..++....+.. .......++|.|+++. .++|+|.+++.+++.+
T Consensus 365 ~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g- 435 (628)
T TIGR02316 365 PLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN- 435 (628)
T ss_pred CCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC-
Confidence 99999999987 568999999999999855443221100 0012235679999998 9999998778888877
Q ss_pred cceeEEEEecC---ccchhccCChhhhhhcc----cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 387 KTMGEIVLRGS---SIMKGYLKNEEATSQSF----KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 387 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
+.|||+++|| ..+.||+++++.+.+.+ .++||+|||+|++|+||.++++||.||+||++|++|+|.+||.+|
T Consensus 436 -~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l 514 (628)
T TIGR02316 436 -EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESV 514 (628)
T ss_pred -CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHH
Confidence 7899999998 46789999988776654 467999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCC---CCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccc
Q 038104 460 FRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGK---TDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQ 536 (567)
Q Consensus 460 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~ 536 (567)
.++|+|.+++|++++++..|+.++++|++.++.... ......++|+++++++|+.|++|+.|+++++||+|.+||++
T Consensus 515 ~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~ 594 (628)
T TIGR02316 515 SSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLL 594 (628)
T ss_pred HhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHH
Confidence 999999999999999999999999999987653110 00123578999999999999999999999999999999999
Q ss_pred hHHHHHHHHh
Q 038104 537 KFQLRALAKN 546 (567)
Q Consensus 537 r~~l~~~~~~ 546 (567)
|+.|++.+..
T Consensus 595 r~~L~~~~~~ 604 (628)
T TIGR02316 595 RRSIQALAEG 604 (628)
T ss_pred HHHHHHHHcC
Confidence 9999998764
No 13
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-69 Score=581.26 Aligned_cols=516 Identities=22% Similarity=0.265 Sum_probs=410.3
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEe----CC-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHH
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIY----EG-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMH 81 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~----~~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (567)
....|+.+++++.++++|+++|+.+ .+ +.+||+||.++++++|++|.++|+++||+|+|+++|++++++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3446899999999999999999943 11 46999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-----Cc
Q 038104 82 FAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-----GI 156 (567)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~~ 156 (567)
+||+++|++++|+++.++.+++.++++.++++++|++.+..+.+.+.....+ ..+.++..+...... ..
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~------~l~~ii~~~~~~~~~~~~~~~~ 194 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP------SVRLIVVVGGADEPLPSLPSGT 194 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC------CceEEEEECCCchhhhhhhccC
Confidence 9999999999999999999999999999999999999887776666544332 345555554221100 01
Q ss_pred cCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhh
Q 038104 157 RFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHC 236 (567)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~ 236 (567)
......|.++.........+.....++++++++|||||||.||||+++|+++..++......+++.++|++++.+|++|.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~ 274 (651)
T PLN02736 195 GVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHI 274 (651)
T ss_pred CcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHH
Confidence 11235677766544322222223567899999999999999999999999999888888778888999999999999999
Q ss_pred hhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc-------------------------
Q 038104 237 NGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE------------------------- 291 (567)
Q Consensus 237 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~------------------------- 291 (567)
+++...+.++..|+++++.+ .++..+++.|+++++|+++++|.++..+.+....
T Consensus 275 ~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (651)
T PLN02736 275 YERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALE 353 (651)
T ss_pred HHHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99987788888899887765 4788999999999999999999999887653100
Q ss_pred ---c-------------cccC-CCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCch
Q 038104 292 ---E-------------RKEI-ASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPD 353 (567)
Q Consensus 292 ---~-------------~~~l-~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 353 (567)
. ...+ +++|.+++||+++++++.++++ .+++++++.||+||+++.++.....
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~---------- 423 (651)
T PLN02736 354 NGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG---------- 423 (651)
T ss_pred cCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC----------
Confidence 0 0012 4899999999999999999998 5699999999999998665543210
Q ss_pred hhhhccccCceeeeecceEEeeCCCCCCcCCC-CcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCC
Q 038104 354 QAKLKARQGISILTLADVDVKNLDTMSSVPRD-GKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDG 431 (567)
Q Consensus 354 ~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g 431 (567)
......+|.|+++. +++++|.+++.....+ ....|||+++||+++.||+++++.+.+.|. +|||+|||+|++|+||
T Consensus 424 -~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG 501 (651)
T PLN02736 424 -DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGG 501 (651)
T ss_pred -CCCCCccCCccCce-EEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCC
Confidence 11235789999998 8999985432211111 114599999999999999999999999985 8999999999999999
Q ss_pred cEEEEccCCceeee-CceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC-----CCC-CCCCH---
Q 038104 432 YLEIKDRSKDVIIS-GGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA-----GKT-DDVNE--- 501 (567)
Q Consensus 432 ~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~-----~~~-~~~~~--- 501 (567)
.+++.||.+|+||. +|++|+|.+||.+|.++|.|.+++|++. ..++.++|+|++.++.. ... ...+.
T Consensus 502 ~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~ 578 (651)
T PLN02736 502 RLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQL 578 (651)
T ss_pred cEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHH
Confidence 99999999999995 7999999999999999999999999983 34778999999865310 000 00111
Q ss_pred ---HHHHHH----HH-----hhCCCCccccEEEEeCCCC------CCCCCccchHHHHHHHHhhh
Q 038104 502 ---ADILSY----CR-----ENLSRFMVPKKVVILPELP------KTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 502 ---~~l~~~----~~-----~~l~~~~~p~~i~~v~~~P------~t~~GKv~r~~l~~~~~~~~ 548 (567)
.++++. ++ +.|+.|++|++|.++++.| +|++||++|+.+++.|++..
T Consensus 579 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i 643 (651)
T PLN02736 579 CNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAI 643 (651)
T ss_pred hcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHH
Confidence 112222 22 2599999999999999876 79999999999999998754
No 14
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.1e-68 Score=564.99 Aligned_cols=506 Identities=27% Similarity=0.418 Sum_probs=428.4
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHH
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMH 81 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (567)
...|++.|+.++|++.++.+|+++|+++.+ +++||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 18 ~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~ 97 (547)
T PRK13295 18 AGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLY 97 (547)
T ss_pred CCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHH
Confidence 456888899999999999999999999865 89999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccch-----HHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCc
Q 038104 82 FAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYV-----QLAREALKLYFVEDRDAAGPRVILIDDIDSPTGI 156 (567)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 156 (567)
+||+++|++++|++|.++.+++.++++.+++++++++.... +.+.+...... ....++.++...
T Consensus 98 la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----- 166 (547)
T PRK13295 98 LACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP------ALRHVVVVGGDG----- 166 (547)
T ss_pred HHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC------CcceEEEecCCC-----
Confidence 99999999999999999999999999999999999987642 22222222111 234455544321
Q ss_pred cCCcccHHHHHhcCC-----C--CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEE
Q 038104 157 RFGEFEYEQFVQMGD-----P--RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLW 229 (567)
Q Consensus 157 ~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 229 (567)
...|.++..... . ..........+++++++|||||||.||+|.++|++++.........++++++|+++.
T Consensus 167 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~ 243 (547)
T PRK13295 167 ---ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILM 243 (547)
T ss_pred ---ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 123433332110 0 011112245689999999999999999999999999888887777788999999999
Q ss_pred ecchHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCC
Q 038104 230 SLPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAP 308 (567)
Q Consensus 230 ~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~ 308 (567)
..|++|..++.. ++.++..|+++++.+..++..+++.++++++|++.++|+++..+..........+++++.+++||++
T Consensus 244 ~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~ 323 (547)
T PRK13295 244 ASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAP 323 (547)
T ss_pred ecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCC
Confidence 999999998765 7778899999999888899999999999999999999999999988766666778899999999999
Q ss_pred CCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCc
Q 038104 309 PPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGK 387 (567)
Q Consensus 309 l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~ 387 (567)
+++++.+.+. .+++++++.||+||++.+++.+... ........+|.|.++. .++++|. ++.+++.|
T Consensus 324 l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~v~i~d~-~~~~~~~g-- 390 (547)
T PRK13295 324 IPGALVERARAALGAKIVSAWGMTENGAVTLTKLDD---------PDERASTTDGCPLPGV-EVRVVDA-DGAPLPAG-- 390 (547)
T ss_pred CCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCC---------cchhccCccccccCCc-EEEEECC-CCCCCCCC--
Confidence 9999999987 5799999999999998665443211 0111234679999988 8999986 46677776
Q ss_pred ceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceE
Q 038104 388 TMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLE 467 (567)
Q Consensus 388 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 467 (567)
+.|||+++|++++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+++.+|.+|+|.+||++|.++++|.+
T Consensus 391 ~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~ 469 (547)
T PRK13295 391 QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQ 469 (547)
T ss_pred CCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeee
Confidence 78999999999999999999888766 67899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHh-hCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 468 AAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRE-NLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 468 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
++|++++++..|++++++|+..++. ..+.+++.+++++ .++.|++|..++++++||+|.+||++|++|++++.+
T Consensus 470 ~~v~~~~~~~~g~~~~~~v~~~~~~-----~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 470 VAIVAYPDERLGERACAFVVPRPGQ-----SLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred EEEEeeecCCCCcEEEEEEEeCCCC-----CCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhc
Confidence 9999999998899999999887653 4567889999986 799999999999999999999999999999988765
No 15
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=6.8e-69 Score=575.08 Aligned_cols=511 Identities=22% Similarity=0.338 Sum_probs=415.9
Q ss_pred HHHHHHHHHHHcCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 16 PLTFLKRAAAVYGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
..++++++++.+|+++|+++.+ +++||+||.+++.++|++|+++|+++||+|+++++|+++++++++||+++|+
T Consensus 59 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 138 (625)
T TIGR02188 59 SYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGA 138 (625)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 3457778888899999998743 4899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccch---------HHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-CccCC
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYV---------QLAREALKLYFVEDRDAAGPRVILIDDIDSPT-GIRFG 159 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~~~~~ 159 (567)
+++++++.++.+++.++++.++++++|+++... ..+.+.+...+. ....++.++...... .....
T Consensus 139 v~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 213 (625)
T TIGR02188 139 IHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV-----SVEHVLVVRRTGNPVPWVEGR 213 (625)
T ss_pred EEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC-----CccEEEEEcCCCCCcCccccc
Confidence 999999999999999999999999999986532 333333332210 123455544322110 01112
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhH-hhhhccCCCCCEEEEecchHhhhh
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLS-LILGWEMGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~~~~g 238 (567)
...|.++........ .......+++++++|||||||.||+|+++|++++..... ....++++++|++++..|++|..+
T Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g 292 (625)
T TIGR02188 214 DVWWHDLMAKASAYC-EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITG 292 (625)
T ss_pred cccHHHHHhhcCCCC-CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhc
Confidence 344666555433222 222356789999999999999999999999998655443 344567889999999999999988
Q ss_pred HHH-HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCH
Q 038104 239 WTF-TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPA 311 (567)
Q Consensus 239 ~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~ 311 (567)
..+ ++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ....++++|.++++|+++++
T Consensus 293 ~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~ 372 (625)
T TIGR02188 293 HSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINP 372 (625)
T ss_pred cHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCH
Confidence 764 7778899999998753 4789999999999999999999999999876533 23457899999999999999
Q ss_pred HHHHHHH-HhC---CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcC-CCC
Q 038104 312 SLLEEIE-LLG---FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVP-RDG 386 (567)
Q Consensus 312 ~~~~~~~-~~~---~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~-~~~ 386 (567)
++.+++. .++ +++++.||+||+++.++..... ........+|.|+++. .++++| +++..++ .+
T Consensus 373 ~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d-~~g~~~~~~g- 440 (625)
T TIGR02188 373 EAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVD-EEGNPVEGPG- 440 (625)
T ss_pred HHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEEC-CCCCCCCCCC-
Confidence 9999887 443 7899999999998775543211 0011235689999998 899998 4667776 55
Q ss_pred cceeEEEEec--CccchhccCChhhhhhcc---cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHc
Q 038104 387 KTMGEIVLRG--SSIMKGYLKNEEATSQSF---KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFR 461 (567)
Q Consensus 387 ~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 461 (567)
+.|||++++ |+++.|||++++.+.+.+ .+|||+|||+|++|++|.+++.||+||+|+++|++|+|.+||++|.+
T Consensus 441 -~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 519 (625)
T TIGR02188 441 -EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVS 519 (625)
T ss_pred -CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHh
Confidence 789999999 589999999998877765 37899999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 462 HPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 462 ~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
+|+|.+++|++++++..|+.++++|++.++... .....++|++++++.++.+++|+.|+++++||+|.+||++|+.|+
T Consensus 520 ~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~ 597 (625)
T TIGR02188 520 HPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEP--DDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLR 597 (625)
T ss_pred CCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCC--CHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHH
Confidence 999999999999999999999999998876521 011247899999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 038104 542 ALAKNF 547 (567)
Q Consensus 542 ~~~~~~ 547 (567)
+.+...
T Consensus 598 ~~~~~~ 603 (625)
T TIGR02188 598 KIAAGE 603 (625)
T ss_pred HHHcCC
Confidence 987654
No 16
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-68 Score=561.28 Aligned_cols=519 Identities=33% Similarity=0.529 Sum_probs=452.6
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
|++.++|+.++|.++++.+|+++|+.+.+.++||+||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 1 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 1 MQDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred CCcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++++++..+.+++.++++.+++++++++.+..+.+.+.....+ ....++..++.... ........+.++..
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 153 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP------TVRTVIVEGDGPAA-PLAPEVGEYEELLA 153 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC------CccEEEEecCcccc-ccccccccHHHHhh
Confidence 999999999999999999999999999999988877776655432 33456655543321 12234566777665
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhh
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAAR 248 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 248 (567)
....... ......+++++++|||||||.||+|.++|+++..........++++++|+++..+|++|.+++...+.++..
T Consensus 154 ~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 154 AASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred cCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 5443332 223566789999999999999999999999998888887778899999999999999999999887778999
Q ss_pred CceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-hCCeeecc
Q 038104 249 GGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-LGFHVTHA 327 (567)
Q Consensus 249 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~ 327 (567)
|+++++.+..++..+++.++++++|.++++|++++.|..........++++|.+++||+++++++.+.+.+ +++++++.
T Consensus 233 G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~ 312 (521)
T PRK06187 233 GAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQG 312 (521)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchhee
Confidence 99999988889999999999999999999999999999887766678889999999999999999999984 59999999
Q ss_pred ccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCCh
Q 038104 328 YGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNE 407 (567)
Q Consensus 328 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 407 (567)
||+||+++++..+........ ........|.|+++. .++|++. ++.+++.+.++.|||+++|+.++.||++++
T Consensus 313 YG~tE~~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~ 385 (521)
T PRK06187 313 YGMTETSPVVSVLPPEDQLPG-----QWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGYWNRP 385 (521)
T ss_pred eccCccCcccccCCccccccc-----ccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcchhhhhcCCH
Confidence 999999877766432211100 112345789999987 8999996 456777733488999999999999999999
Q ss_pred hhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEE
Q 038104 408 EATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFIS 487 (567)
Q Consensus 408 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 487 (567)
+.+.+.|.++||+|||+++++++|.+++.||.+|+++.+|.+++|.+||++|.++++|.+++|++.+++..++.++++++
T Consensus 386 ~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 465 (521)
T PRK06187 386 EATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVV 465 (521)
T ss_pred HHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888899999998
Q ss_pred eecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 488 VKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
..++. ..+.+++++++++.++.+.+|..++++++||+|++||++|+.|++++++-
T Consensus 466 ~~~~~-----~~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 466 LKPGA-----TLDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred ECCCC-----CCCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 87665 46788999999999999999999999999999999999999999998763
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-68 Score=574.03 Aligned_cols=509 Identities=23% Similarity=0.327 Sum_probs=414.9
Q ss_pred HHHHHHHHHHcCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 17 LTFLKRAAAVYGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
.++++++++++|+++|+++.+ +++||+||.+++.++|++|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 457888888999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccch---------HHHHHHhhhhhccccCCCCCeEEEEeCCCCCCC-ccCCc
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYV---------QLAREALKLYFVEDRDAAGPRVILIDDIDSPTG-IRFGE 160 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-~~~~~ 160 (567)
++++++.++.+++.++++.++++++|+++... +.+.+.+...+ ....++..+....... .....
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 223 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP------SVEKVIVVRRTGGDVDWVEGRD 223 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC------CccEEEEEcCCCCCcCcCCCCc
Confidence 99999999999999999999999999976532 23333332221 3345555543221110 01123
Q ss_pred ccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhH-hhhhccCCCCCEEEEecchHhhhhH
Q 038104 161 FEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLS-LILGWEMGSAPVYLWSLPMFHCNGW 239 (567)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~~~~g~ 239 (567)
..|.++....... .+......+++++++|||||||.||+|+++|++++.+... ....+++.++|++++..|++|..++
T Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 302 (637)
T PRK00174 224 LWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGH 302 (637)
T ss_pred ccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhh
Confidence 4456655433222 2223356789999999999999999999999998755433 3345678899999999999999887
Q ss_pred HH-HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHH
Q 038104 240 TF-TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPAS 312 (567)
Q Consensus 240 ~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~ 312 (567)
.+ ++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ....++++|.++++|++++++
T Consensus 303 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~ 382 (637)
T PRK00174 303 SYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPE 382 (637)
T ss_pred HHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHH
Confidence 64 7778899999988753 4789999999999999999999999999876533 234578999999999999999
Q ss_pred HHHHHH-HhC---CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcc
Q 038104 313 LLEEIE-LLG---FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKT 388 (567)
Q Consensus 313 ~~~~~~-~~~---~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~ 388 (567)
+.+++. .++ +++++.||+||+++.++....+ . .......+|.|+++. .++++|. .+.+++.+ +
T Consensus 383 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~--------~-~~~~~~~vG~p~~g~-~~~i~d~-~g~~~~~g--~ 449 (637)
T PRK00174 383 AWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPG--------A-TPLKPGSATRPLPGI-QPAVVDE-EGNPLEGG--E 449 (637)
T ss_pred HHHHHHHHhCCCCCceEecccccccCCceEecCCC--------C-CCcCCCcccCCCCCc-eEEEECC-CCCCCCCC--C
Confidence 999887 444 7899999999998765432110 0 011234689999998 8999985 56777766 7
Q ss_pred eeEEEEec--CccchhccCChhhhhhcc---cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC
Q 038104 389 MGEIVLRG--SSIMKGYLKNEEATSQSF---KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP 463 (567)
Q Consensus 389 ~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 463 (567)
.|||+++| |.++.|||++++.+.+.+ .+|||+|||+|+++++|.+++.||.||+|+++|++|+|.+||++|.++|
T Consensus 450 ~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~ 529 (637)
T PRK00174 450 GGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHP 529 (637)
T ss_pred cEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCC
Confidence 89999999 689999999999887765 3789999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 464 RVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 464 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+|.+++|++.+++..|+.++++|+..++... .....++|++++++.|+.|+.|..|+++++||+|++||++|+.|++.
T Consensus 530 ~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~--~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~ 607 (637)
T PRK00174 530 KVAEAAVVGRPDDIKGQGIYAFVTLKGGEEP--SDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKI 607 (637)
T ss_pred CcceEEEEeeEcCCCCeEEEEEEEECCCCCC--CHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHH
Confidence 9999999999999999999999998765410 01125789999999999999999999999999999999999999998
Q ss_pred HHhh
Q 038104 544 AKNF 547 (567)
Q Consensus 544 ~~~~ 547 (567)
....
T Consensus 608 ~~~~ 611 (637)
T PRK00174 608 AEGE 611 (637)
T ss_pred HcCC
Confidence 7654
No 18
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5e-69 Score=564.70 Aligned_cols=504 Identities=19% Similarity=0.233 Sum_probs=408.2
Q ss_pred ccccccCCCCCHHHHHHHHHHHcCCceEEEeCC-eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 5 SKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEG-ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 5 ~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
||.-..++..++.+.|.+.++++|+++|+.+.+ .++||+||.++++++|+.|.+ .+||+|+|+++|++++++++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA 86 (539)
T PRK06334 10 SKRGKLRSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFA 86 (539)
T ss_pred hhccccCcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHH
Confidence 445566788999999999999999999998866 799999999999999999987 3899999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccH
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEY 163 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 163 (567)
|+++|++++|+++.++.+++.++++.+++++++++.+....+.+...... . ....++.+++.... ..+
T Consensus 87 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--~---~~~~~i~~~~~~~~-------~~~ 154 (539)
T PRK06334 87 TLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDA--E---YPFSLIYMEEVRKE-------LSF 154 (539)
T ss_pred HHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccc--c---ccccEEEEehhhhh-------ccH
Confidence 99999999999999999999999999999999999876665554322100 0 01233333321100 001
Q ss_pred HHHHh-----cCCCC----CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchH
Q 038104 164 EQFVQ-----MGDPR----FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMF 234 (567)
Q Consensus 164 ~~~~~-----~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~ 234 (567)
.+... ..... ........++++++++|||||||.||+|.++|+++..+.......+++..+|+++..+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~ 234 (539)
T PRK06334 155 WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPF 234 (539)
T ss_pred HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchH
Confidence 11000 00000 0001124568999999999999999999999999988877777777889999999999999
Q ss_pred hhhhHHH-HHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHH
Q 038104 235 HCNGWTF-TWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPAS 312 (567)
Q Consensus 235 ~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~ 312 (567)
|.+|+.. ++.++..|+++++.. .+++..+++.|+++++|++.++|+++..|++........++++|.+++||++++++
T Consensus 235 h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~ 314 (539)
T PRK06334 235 HAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDS 314 (539)
T ss_pred hhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHH
Confidence 9999864 677788899988775 47899999999999999999999999999887655556788999999999999999
Q ss_pred HHHHHH-Hh-CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCccee
Q 038104 313 LLEEIE-LL-GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMG 390 (567)
Q Consensus 313 ~~~~~~-~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~G 390 (567)
+.+++. .+ ++.+++.||+||++.+++..... .......+|.|+++. +++++|.+++.+++.| +.|
T Consensus 315 ~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~G 381 (539)
T PRK06334 315 LYQEALKTFPHIQLRQGYGTTECSPVITINTVN----------SPKHESCVGMPIRGM-DVLIVSEETKVPVSSG--ETG 381 (539)
T ss_pred HHHHHHHHCCCCeEEecccccccCceEEeccCC----------CCCCCCcCceecCCC-EEEEEcCCCCccCCCC--ceE
Confidence 999998 45 68999999999998766543211 011234689999998 8999987777888877 889
Q ss_pred EEEEecCccchhccCChhhhhhcc--cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceE-
Q 038104 391 EIVLRGSSIMKGYLKNEEATSQSF--KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLE- 467 (567)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~- 467 (567)
||+++|++++.||+++++.+.... .+|||+|||+|+++++|.+++.||.+|+||++|++|+|.+||.+|.++|+|.+
T Consensus 382 el~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~ 461 (539)
T PRK06334 382 LVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAA 461 (539)
T ss_pred EEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccc
Confidence 999999999999999998654332 26799999999999999999999999999999999999999999999999987
Q ss_pred -----EEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 468 -----AAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 468 -----~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
++|+++++.. ..++++++. ..+.+++++++++. ++.|+.|..++++++||+|++||++|+.|+
T Consensus 462 ~~~~~~~v~~~~~~~--~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~ 530 (539)
T PRK06334 462 DHAGPLVVCGLPGEK--VRLCLFTTF---------PTSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLN 530 (539)
T ss_pred cccCceEEEcCCCCc--eEEEEEEec---------cCChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHH
Confidence 7777776432 233334332 12467899999886 789999999999999999999999999999
Q ss_pred HHHHhh
Q 038104 542 ALAKNF 547 (567)
Q Consensus 542 ~~~~~~ 547 (567)
+....+
T Consensus 531 ~~~~~~ 536 (539)
T PRK06334 531 ALAKSL 536 (539)
T ss_pred HHHHHh
Confidence 987664
No 19
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-68 Score=563.36 Aligned_cols=514 Identities=27% Similarity=0.394 Sum_probs=437.8
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhh
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPM 86 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (567)
.++.++.|+.++|.+.++.+|+++|+++.++++||+||.+++.++|..|.++ |+++||+|+++++|+++++++++||++
T Consensus 4 ~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 4 SLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 5667889999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred ccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCC--------------
Q 038104 87 AEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDS-------------- 152 (567)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-------------- 152 (567)
+|++++|+++..+.+++.++++.++++.++++.+....+....... ....++.......
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL-------RLRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc-------CcceEEEecchhhcccccccCcccccc
Confidence 9999999999999999999999999999999988777666543321 1122222211000
Q ss_pred -----CCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEE
Q 038104 153 -----PTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVY 227 (567)
Q Consensus 153 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~ 227 (567)
......+...|.+....... .+......+++++++|||||||.||+|.++|++++.++......+++..+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 234 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVV 234 (546)
T ss_pred cccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceE
Confidence 00011234456665543221 12233567899999999999999999999999999888887777888999999
Q ss_pred EEecchHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcC
Q 038104 228 LWSLPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGG 306 (567)
Q Consensus 228 ~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g 306 (567)
++.+|++|.+|+.. ++.++..|+++++.+.+++..+++.++++++|++.++|.++..++.........+++++.+++||
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG 314 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGG 314 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecc
Confidence 99999999999865 67788999999999989999999999999999999999999999876555556678999999999
Q ss_pred CCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCC
Q 038104 307 APPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRD 385 (567)
Q Consensus 307 ~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~ 385 (567)
+++++++.+++. .+++++++.||+||++......... ......+|.|+++. .++++|.+++..++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g 382 (546)
T PRK08314 315 AAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPPG 382 (546)
T ss_pred ccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCCC
Confidence 999999999988 5699999999999998765442210 11235689999998 8999998788888877
Q ss_pred CcceeEEEEecCccchhccCChhhhhhccc----CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHc
Q 038104 386 GKTMGEIVLRGSSIMKGYLKNEEATSQSFK----NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFR 461 (567)
Q Consensus 386 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 461 (567)
+.|||+++|++++.||+++++.+.+.|. .+||+|||+|+++++|.+++.||.||+++++|.+|+|.+||++|.+
T Consensus 383 --~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~ 460 (546)
T PRK08314 383 --EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYK 460 (546)
T ss_pred --CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHh
Confidence 7899999999999999999998888774 2599999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 462 HPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 462 ~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
+|+|.+++|++.++...|+.++++++..++... ..+.++++++++++++.|++|..++++++||+|.+||++|+.|+
T Consensus 461 ~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~---~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~ 537 (546)
T PRK08314 461 HPAIQEACVIATPDPRRGETVKAVVVLRPEARG---KTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQ 537 (546)
T ss_pred CcchheEEEEeCCCcccCceeEEEEEECCCCCC---CCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHH
Confidence 999999999999998889999999988765421 34568999999999999999999999999999999999999998
Q ss_pred HHHHhh
Q 038104 542 ALAKNF 547 (567)
Q Consensus 542 ~~~~~~ 547 (567)
+..+..
T Consensus 538 ~~~~~~ 543 (546)
T PRK08314 538 EQEKAR 543 (546)
T ss_pred HHHhhh
Confidence 766543
No 20
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-68 Score=557.85 Aligned_cols=522 Identities=30% Similarity=0.493 Sum_probs=431.6
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeC--C--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYE--G--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
-+.++.++|++.++.+|+.+++.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 3468999999999999999998752 2 68999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHH
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFV 167 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
|+++++++|..+.+++.++++.+++++++++.+..+.+.+...... ....++.+.+....+........|.++.
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP------NVKGWVAMTDAAHLPAGSTPLLCYETLV 161 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC------CceEEEEEccCCccccCCcccccHHHHh
Confidence 9999999999999999999999999999999887766655543322 3344444443322111112345566665
Q ss_pred hcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhh--HhhhhccCCCCCEEEEecchHhhhhHHHHHHH
Q 038104 168 QMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTL--SLILGWEMGSAPVYLWSLPMFHCNGWTFTWGV 245 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 245 (567)
......... ...+++++++++|||||||.||+|.++|++++.+.. .....+++.++|+++...|++|.+++...+.+
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~ 240 (539)
T PRK07008 162 GAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSA 240 (539)
T ss_pred cccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHH
Confidence 443332222 235667899999999999999999999999865432 23346678889999999999999888777788
Q ss_pred HhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCe
Q 038104 246 AARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFH 323 (567)
Q Consensus 246 ~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 323 (567)
+..|+++++.+ .+++..+++.++++++|++.++|+++..+++........+++++.++++|+++++++.+.+. .++++
T Consensus 241 l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 320 (539)
T PRK07008 241 PLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYGVE 320 (539)
T ss_pred HhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhCCc
Confidence 88999988864 57899999999999999999999999999887666666788999999999999999999997 67999
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||++..++.+....................+|.|+++. .++++|. ++..++.++++.|||+++|++++.||
T Consensus 321 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy 398 (539)
T PRK07008 321 VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDRY 398 (539)
T ss_pred eecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEEEeCCccchhh
Confidence 999999999997665543222111112221222345689999998 8999986 56667665446799999999999999
Q ss_pred cCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCcee
Q 038104 404 LKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPC 483 (567)
Q Consensus 404 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (567)
++++. ..+.+|||+|||+|++++||.+++.||.+|+++.+|.+++|.+||.++..+|.|.++++++++++..++.++
T Consensus 399 ~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~ 475 (539)
T PRK07008 399 FRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPL 475 (539)
T ss_pred cCChh---hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceE
Confidence 99884 345589999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcc
Q 038104 484 AFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 484 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
++|+..++. ..+.+++++++++++++|+.|+.|+++++||+|.+||++|++|++++.+...+
T Consensus 476 ~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 476 LVVVKRPGA-----EVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred EEEEeCCCC-----ccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhccc
Confidence 988876554 46788999999999999999999999999999999999999999999887543
No 21
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.7e-68 Score=558.17 Aligned_cols=505 Identities=28% Similarity=0.403 Sum_probs=428.8
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYE--GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
.+|+.+++.++++++|+++|+++. ++++||.||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 458999999999999999999985 478999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
++|+++.++.+++..+++.++++++|++......+.+.... ....++.++... .....+.++....
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--------~~~~~i~~~~~~------~~~~~~~~~~~~~ 167 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--------DGVTVVTIDDPP------EGCLHFSELTQAD 167 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--------CCceEEEeCCCC------CCceeHHHHhcCC
Confidence 99999999999999999999999999998877766554321 112444444321 1224455554432
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh----hccCCCCCEEEEecchHhhhhHHH-HHHH
Q 038104 171 DPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL----GWEMGSAPVYLWSLPMFHCNGWTF-TWGV 245 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~-~~~~ 245 (567)
... .+.....++++++++|||||||.||+|.++|+++......... .+++..+|+++..+|++|.+++.. ++.+
T Consensus 168 ~~~-~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 246 (537)
T PLN02246 168 ENE-LPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCG 246 (537)
T ss_pred CCC-CCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHH
Confidence 221 1222345789999999999999999999999999876655433 457889999999999999999865 5667
Q ss_pred HhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCe
Q 038104 246 AARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFH 323 (567)
Q Consensus 246 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~ 323 (567)
+..|+++++.+.+++..+++.|+++++|++.++|+++..|++........++++|.+++||+++++++.+.+.+ + ++.
T Consensus 247 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~ 326 (537)
T PLN02246 247 LRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAV 326 (537)
T ss_pred HhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCe
Confidence 88899999999899999999999999999999999999998776555556789999999999999999999984 4 788
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||++.+++.+.... ..........+|.|+++. .+++++.+++.+++.+ +.|||+++|++++.||
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~GY 397 (537)
T PLN02246 327 LGQGYGMTEAGPVLAMCLAFA------KEPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRGPQIMKGY 397 (537)
T ss_pred EeccccccccCcccccccccC------CCCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEECCchhccc
Confidence 999999999987655432100 000011224679999887 9999997778888887 7899999999999999
Q ss_pred cCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCce
Q 038104 404 LKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESP 482 (567)
Q Consensus 404 ~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~ 482 (567)
+++++.+...+. ++||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|+.+
T Consensus 398 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~ 477 (537)
T PLN02246 398 LNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVP 477 (537)
T ss_pred cCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCcee
Confidence 999999988884 7999999999999999999999999999999999999999999999999999999999998888889
Q ss_pred eEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 483 CAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 483 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+++++..++. ..+.++|+++++++++.|+.|..++++++||+|++||++|+.|++++.+
T Consensus 478 ~~~v~~~~~~-----~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 478 VAFVVRSNGS-----EITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred EEEEEeCCCC-----CCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 9998877554 4577899999999999999999999999999999999999999998753
No 22
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-68 Score=555.83 Aligned_cols=491 Identities=29% Similarity=0.460 Sum_probs=423.6
Q ss_pred CHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
.+.++++++|+.+||++|+++.++.+||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999985 79999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++..+.+++.++++.++++.++++++....+.+..... ....++.+.+ +.++......
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-------------~~~~~~~~~~- 141 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS-------YVQRVISITS-------------LKEIEDRKID- 141 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc-------CcceEEEecc-------------hHhhhccCCC-
Confidence 999999999999999999999999987766554432211 2223333322 1222221111
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCcee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTN 252 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~ 252 (567)
.......+++++++|||||||.||+|.++|.++..+.......+++..+|+++..+|++|.+|+.. .+.++..|+++
T Consensus 142 --~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~ 219 (496)
T PRK06839 142 --NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVI 219 (496)
T ss_pred --CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEE
Confidence 112245678999999999999999999999999877776667778899999999999999999865 46677889998
Q ss_pred eeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccc
Q 038104 253 VCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTE 332 (567)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE 332 (567)
++.+.+++..+++.++++++|.+.++|.+++.+++........+++++.+++||+++++++.+.+...++++++.||+||
T Consensus 220 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE 299 (496)
T PRK06839 220 IVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQGFGMTE 299 (496)
T ss_pred EEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEeeccCCC
Confidence 88888999999999999999999999999999998766566678899999999999999999999877999999999999
Q ss_pred cCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhh
Q 038104 333 ATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQ 412 (567)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (567)
++..++..... ........+|.|+++. .+++++.+. ..++.| +.|||+++|+.++.||+++++.+..
T Consensus 300 ~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~~~-~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~ 366 (496)
T PRK06839 300 TSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDENK-NKVEVG--EVGELLIRGPNVMKEYWNRPDATEE 366 (496)
T ss_pred CCcceEecccc---------cccccCCCCcccCCCc-eEEEECCCc-CCCCCC--CceEEEEECCCcchhhcCChHHHHH
Confidence 98755433210 1112235689999888 899998754 456766 7899999999999999999999998
Q ss_pred cccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCC
Q 038104 413 SFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNS 492 (567)
Q Consensus 413 ~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~ 492 (567)
.+.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||++|..+|+|.+++|++++++..|+.++++|+..++.
T Consensus 367 ~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~ 446 (496)
T PRK06839 367 TIQDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSS 446 (496)
T ss_pred HHcCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 493 AGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 493 ~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
..+.+++++++++.++.|++|..+++++++|+|.+||++|++|+++.++
T Consensus 447 -----~~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 447 -----VLIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred -----CCCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 5677899999999999999999999999999999999999999987764
No 23
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.7e-68 Score=562.98 Aligned_cols=507 Identities=26% Similarity=0.400 Sum_probs=416.1
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEG--ARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
.+++.+.+... ..+|+++|+++.. .++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|+
T Consensus 39 ~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 39 NLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred CCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 34555544444 5789999999854 479999999999999999998 9999999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhc
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQM 169 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 169 (567)
++++++|.++.+++.++++.+++++++++.+..+.+... . ..++.+++.............|.++...
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----------G-VPVIGVPENYDFDSKRIEFPKFYELIKE 185 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----------C-CcEEecCcccccccCccCcccHHHHhhc
Confidence 999999999999999999999999999988765544321 1 1223222111000001122345555444
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh----hcc-CCCCCEEEEecchHhhhhHHH-HH
Q 038104 170 GDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL----GWE-MGSAPVYLWSLPMFHCNGWTF-TW 243 (567)
Q Consensus 170 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~----~~~-~~~~d~~~~~~p~~~~~g~~~-~~ 243 (567)
..... +.....++++++++|||||||.||+|.++|+++...+..... .+. ....++++..+|++|.+|+.. ++
T Consensus 186 ~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 264 (560)
T PLN02574 186 DFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVV 264 (560)
T ss_pred CCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHH
Confidence 32221 222345689999999999999999999999999876655432 222 235678899999999999875 45
Q ss_pred HHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc-ccccCCCceEEEEcCCCCCHHHHHHHH-Hh-
Q 038104 244 GVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE-ERKEIASPVQILTGGAPPPASLLEEIE-LL- 320 (567)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~- 320 (567)
.++..|+++++.+.+++..+++.|+++++|.+.++|+++..|++.... ....+++++.+++||+++++++.+.+. .+
T Consensus 265 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~ 344 (560)
T PLN02574 265 GLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLP 344 (560)
T ss_pred HHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCC
Confidence 566789999988889999999999999999999999999999876533 345678999999999999999999988 55
Q ss_pred CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccc
Q 038104 321 GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIM 400 (567)
Q Consensus 321 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 400 (567)
++++++.||+||++.+++..... ........+|.+.++. .++|+|.+++.+++.| +.||||++|++++
T Consensus 345 ~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~g~~~~ 412 (560)
T PLN02574 345 HVDFIQGYGMTESTAVGTRGFNT---------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQGPGVM 412 (560)
T ss_pred CCcEEecccccccCceeecCCCc---------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEECcchh
Confidence 68999999999998654421100 0112235789999998 9999997788888877 7899999999999
Q ss_pred hhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCC
Q 038104 401 KGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWG 479 (567)
Q Consensus 401 ~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (567)
.||+++++.+.+.|. +|||+|||+|+++++|.+++.||.+|+|+++|++|+|.+||.+|.++|+|.+++|++++++..|
T Consensus 413 ~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g 492 (560)
T PLN02574 413 KGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECG 492 (560)
T ss_pred hhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCC
Confidence 999999999988875 8999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcc
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
+.++++|+..++. ..+.++++++++++++.|+.|+.++++++||+|++||++|+.|++++.+.+.+
T Consensus 493 ~~~~a~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 558 (560)
T PLN02574 493 EIPVAFVVRRQGS-----TLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVSS 558 (560)
T ss_pred cceEEEEEeCCCC-----CCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcccc
Confidence 9999999876554 45678999999999999999999999999999999999999999998776544
No 24
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-68 Score=560.03 Aligned_cols=494 Identities=24% Similarity=0.345 Sum_probs=418.3
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..+.++.++|.+.++++|+++|+++.+.++||+||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 40 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 119 (537)
T PRK13382 40 REGMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGAD 119 (537)
T ss_pred hhcCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcE
Confidence 34578999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
++|+++.++.+++.++++.++++++|++......+........ ....++..++.. ....+..+....
T Consensus 120 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~ 186 (537)
T PRK13382 120 ILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP------QATRIVAWTDED-------HDLTVEVLIAAH 186 (537)
T ss_pred EEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc------ccceEEEecCCc-------ccccHHHHhhcc
Confidence 9999999999999999999999999999877666555433211 122333332211 112344443322
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCc
Q 038104 171 DPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGG 250 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~ 250 (567)
.. ..+ ....++.++++|||||||.||+|.++|.+++.........+.+..+++++...|++|.+|+..++.++..|+
T Consensus 187 ~~-~~~--~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~ 263 (537)
T PRK13382 187 AG-QRP--EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLAC 263 (537)
T ss_pred Cc-CCC--CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCc
Confidence 21 111 134578899999999999999999999988877777777777889999999999999999987888889999
Q ss_pred eeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeecc
Q 038104 251 TNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHA 327 (567)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~ 327 (567)
++++...+++..+++.|+++++|++.++|++++.|++.... ....++++|.+++||+++++++.+.|. .++.++++.
T Consensus 264 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~ 343 (537)
T PRK13382 264 TIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNN 343 (537)
T ss_pred EEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEec
Confidence 99988889999999999999999999999999999876432 223456899999999999999999998 568899999
Q ss_pred ccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCCh
Q 038104 328 YGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNE 407 (567)
Q Consensus 328 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 407 (567)
||+||++.+++.+.. ........+|.|+++. .++++|. .+.+++.| +.|||+++|++++.||+ +
T Consensus 344 YG~TE~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~gY~--~ 407 (537)
T PRK13382 344 YNATEAGMIATATPA----------DLRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFDGYT--S 407 (537)
T ss_pred ccccccCcceecChh----------HhccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcccCcc--c
Confidence 999999876654321 1112235789999998 9999987 56777776 78999999999999998 3
Q ss_pred hhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEE
Q 038104 408 EATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFIS 487 (567)
Q Consensus 408 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 487 (567)
+.+. .+.+|||+|||+++++++|++++.||++|+|+.+|++|+|.+||..|.++|+|.+++|++++++..|++++++|+
T Consensus 408 ~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv 486 (537)
T PRK13382 408 GSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVV 486 (537)
T ss_pred cchh-hccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEE
Confidence 4443 456899999999999999999999999999999999999999999999999999999999999888999999998
Q ss_pred eecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 488 VKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
..++. ....+++++++++.++.|++|..+++++++|+|++||++|++|++
T Consensus 487 ~~~~~-----~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 487 LKPGA-----SATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred ECCCC-----CCCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 86554 466789999999999999999999999999999999999999864
No 25
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-67 Score=557.19 Aligned_cols=534 Identities=56% Similarity=0.977 Sum_probs=440.0
Q ss_pred cccccccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 4 LSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
|......+.++++.++|++.++.+|+++|+.+.+..+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA 87 (545)
T PRK08162 8 LDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFG 87 (545)
T ss_pred cCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHH
Confidence 34455667889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCC--CCCccCCcc
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDS--PTGIRFGEF 161 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~~~~~ 161 (567)
|+++|++++|+++..+.+++.++++.++++.++++.+....+.+...... ....+.++.... ......+..
T Consensus 88 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 160 (545)
T PRK08162 88 VPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP-------GPKPLVIDVDDPEYPGGRFIGAL 160 (545)
T ss_pred HHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC-------CCceEEEecCccccccCCCcccc
Confidence 99999999999999999999999999999999999988777766543221 122233322111 111122344
Q ss_pred cHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH
Q 038104 162 EYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF 241 (567)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 241 (567)
.+..+.....+...+....+.+++++++|||||||.||+|.++|+++...+......+.+..++++++.+|++|.+++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~ 240 (545)
T PRK08162 161 DYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCF 240 (545)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHH
Confidence 56666554333322222234457899999999999999999999988777666666677888899999999999999877
Q ss_pred HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhC
Q 038104 242 TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLG 321 (567)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~ 321 (567)
.+...+.|++.++...+++..+++.++++++|++.++|+++..|++........+.+.+.++++|+.+++.+.+.++.++
T Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 320 (545)
T PRK08162 241 PWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEIG 320 (545)
T ss_pred HHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHhC
Confidence 66666778888888889999999999999999999999999999876554444556677788999999999999998889
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK 401 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 401 (567)
+++++.||+||+++.+..+.....+...+...........|.+.+....++++|.+.+.+++.++.+.|||+++|+.++.
T Consensus 321 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~ 400 (545)
T PRK08162 321 FDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMK 400 (545)
T ss_pred CceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchh
Confidence 99999999999976666554333333332222222234556666555467888876777777654457999999999999
Q ss_pred hccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCc
Q 038104 402 GYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGES 481 (567)
Q Consensus 402 gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (567)
||+++++.+...|.+|||+|||+|++|++|.+++.||.+|+++.+|.+++|.+||..|.++|+|.+++|++.+++..|+.
T Consensus 401 gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~ 480 (545)
T PRK08162 401 GYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEV 480 (545)
T ss_pred hhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcc
Q 038104 482 PCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 482 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
++++++..++. ..+.+++++++++.++.|++|..+++ ++||+|.+||++|+.|++++.++...
T Consensus 481 ~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~~ 543 (545)
T PRK08162 481 PCAFVELKDGA-----SATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKAI 543 (545)
T ss_pred EEEEEEeCCCC-----CCCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhhh
Confidence 99999887654 45788999999999999999998875 68999999999999999998887543
No 26
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=8.1e-68 Score=556.77 Aligned_cols=505 Identities=26% Similarity=0.348 Sum_probs=427.3
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
..+..+.|+.++|+++++.+|+++|+++.+..+||+||.+++.++|..|.++|+++||+|+++++|+++++++++||+++
T Consensus 15 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 15 PLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred cCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHH
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFV 167 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
|++++|+++.++.+++.++++.+++++++++.+....+.+...... ....++.++..... .....+....+.
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~ 166 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDL------PLPAVWLLDAPASV--SVPAGWSTAPLP 166 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccccc------CcceEEEecCcccc--ccccccchhhhc
Confidence 9999999999999999999999999999999887766655432210 23445555432210 000001111111
Q ss_pred hcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHh
Q 038104 168 QMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAA 247 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 247 (567)
. ...........++++++++|||||||.||+|.++|+++..........++++++++++...|++|.+++..++.+++
T Consensus 167 ~--~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~ 244 (542)
T PRK06155 167 P--LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALL 244 (542)
T ss_pred c--cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHH
Confidence 1 11111122345689999999999999999999999999877777777788999999999999999999988888999
Q ss_pred hCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeec
Q 038104 248 RGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTH 326 (567)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~ 326 (567)
.|+++++.+.+++..+++.|+++++|++.++|+++..|+..........++++.++.|| +++.+.+.++ .+++++++
T Consensus 245 ~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~ 322 (542)
T PRK06155 245 AGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFGVDLLD 322 (542)
T ss_pred cCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEe
Confidence 99999998889999999999999999999999999999887665555667888776555 5788888887 56999999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecC---ccchhc
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGS---SIMKGY 403 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy 403 (567)
.||+||++.++..+.. ......+|.+.++. .++|++. .+.+++.+ +.|||+++|+ .++.||
T Consensus 323 ~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~~~~~~~GY 386 (542)
T PRK06155 323 GYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADEPFAFATGY 386 (542)
T ss_pred eecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCCccccchhh
Confidence 9999999877654310 11234688888887 8899885 46777777 7899999998 689999
Q ss_pred cCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCcee
Q 038104 404 LKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPC 483 (567)
Q Consensus 404 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (567)
+++++.+.+.|.++||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+++.++|+|.+++|++++++..++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~ 466 (542)
T PRK06155 387 FGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVM 466 (542)
T ss_pred cCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 484 AFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 484 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
++++...+. ..+..+++++++++++.|++|..|.++++||+|.+||++|++|++++.
T Consensus 467 ~~v~~~~~~-----~~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 467 AAVVLRDGT-----ALEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred EEEEECCCC-----CCCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 888877654 567899999999999999999999999999999999999999998774
No 27
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=6.2e-68 Score=552.24 Aligned_cols=481 Identities=29% Similarity=0.473 Sum_probs=416.4
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
+|+.++|.+++..+||++|+++.++.+||+||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++..+.+++.++++.++++.++++......+..... ..+.++.......
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~ 131 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS------------------------------VKFAELMNGPKEE 131 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc------------------------------ccHHHHhhccccc
Confidence 9999999999999999999999998765443322100 1122222222111
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNV 253 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~ 253 (567)
..+......+++++++|||||||.||+|.++|.++...+......+++.++|+++..+|++|.+++..++.++..|++++
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~ 211 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVV 211 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEE
Confidence 11222345678999999999999999999999999887777767788999999999999999999988888899999999
Q ss_pred eeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeecccccccc
Q 038104 254 CLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEA 333 (567)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~ 333 (567)
+.+..++..+++.++++++|++.++|+++..|....... ....++|.+++||+++++.+.+.++.+++++++.||+||+
T Consensus 212 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~ 290 (483)
T PRK03640 212 LVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYGMTET 290 (483)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeeccCcc
Confidence 999999999999999999999999999999998764433 3346899999999999999999998889999999999998
Q ss_pred CCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhc
Q 038104 334 TGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQS 413 (567)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 413 (567)
+..++.... .........+|.|+++. .+++.+. +.+++.+ +.|||+++|++++.||+++++.+.+.
T Consensus 291 ~~~~~~~~~---------~~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~ 356 (483)
T PRK03640 291 ASQIVTLSP---------EDALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNREDATRET 356 (483)
T ss_pred cccccccCc---------ccccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCCHHHHHHH
Confidence 765443221 11112235689999887 8888774 3566665 78999999999999999999999999
Q ss_pred ccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC
Q 038104 414 FKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA 493 (567)
Q Consensus 414 ~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 493 (567)
|.++||+|||++++++||.+++.||.+|+++.+|.+++|.+||+.+..+++|.++++++.+++..+..++++++...
T Consensus 357 ~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~--- 433 (483)
T PRK03640 357 FQDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSG--- 433 (483)
T ss_pred HhcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888777432
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 494 GKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 494 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
..+.+++++++++.++.|++|..|+++++||+|++||++|+.|++++++
T Consensus 434 ----~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 434 ----EVTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred ----CCCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999999999875
No 28
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-67 Score=559.11 Aligned_cols=548 Identities=52% Similarity=0.910 Sum_probs=437.0
Q ss_pred cccccccccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHH
Q 038104 2 DKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMH 81 (567)
Q Consensus 2 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (567)
++|-+..+.+..+|+..++.+.+..+|+++|+.+.+.++||+||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~ 87 (567)
T PLN02479 8 DDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAH 87 (567)
T ss_pred ccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH
Confidence 45566777888899999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhcc-ccCCCCCeEEEEeCCCCCC-----C
Q 038104 82 FAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVE-DRDAAGPRVILIDDIDSPT-----G 155 (567)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~~~~ii~~~~~~~~~-----~ 155 (567)
+||+++|++++|+++..+.+++.++++.++++.+++++...+...++....... ......+.++.++...... .
T Consensus 88 la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
T PLN02479 88 FGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYA 167 (567)
T ss_pred HHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccc
Confidence 999999999999999999999999999999999999988766655544322110 0000122344443221100 0
Q ss_pred ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHh
Q 038104 156 IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFH 235 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 235 (567)
...+...|.++.....+..........+++++++|||||||.||+|.++|+++..........+++..+++++..+|++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h 247 (567)
T PLN02479 168 LGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFH 247 (567)
T ss_pred cccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhh
Confidence 11234456666654332221111223346788999999999999999999998776665555677889999999999999
Q ss_pred hhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCccc-ccCCCceEEEEcCCCCCHHHH
Q 038104 236 CNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEER-KEIASPVQILTGGAPPPASLL 314 (567)
Q Consensus 236 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~l~~l~~~~~~g~~l~~~~~ 314 (567)
.+++...+...+.++..+++..+++..+++.++++++|++.++|.++..|........ ..+++++.++++|+++++.+.
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~ 327 (567)
T PLN02479 248 CNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVL 327 (567)
T ss_pred hhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHH
Confidence 9998766555555666667778899999999999999999999999999987643332 256789999999999999999
Q ss_pred HHHHHhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEE
Q 038104 315 EEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVL 394 (567)
Q Consensus 315 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v 394 (567)
+++...+.++++.||+||+++.++.+.....+...+...........|.+.++...+++++.+++.+++.++++.|||++
T Consensus 328 ~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 328 FAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 99987789999999999997665544322222222211111222346777777645888886677777665446799999
Q ss_pred ecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeec
Q 038104 395 RGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMP 474 (567)
Q Consensus 395 ~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 474 (567)
+|++++.||+++++.+.+.|.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||.+|.++|.|.+++|++.+
T Consensus 408 ~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~ 487 (567)
T PLN02479 408 RGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARP 487 (567)
T ss_pred eccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcc
Q 038104 475 HPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 475 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
++..|+.+++++++..+..........++|.++++++++.|+.|+.+++ ++||+|++||++|+.|++++.....+
T Consensus 488 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~ 562 (567)
T PLN02479 488 DERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPV 562 (567)
T ss_pred chhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCc
Confidence 8888889999998876532111123457899999999999999998876 77999999999999999987775443
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-67 Score=554.64 Aligned_cols=506 Identities=31% Similarity=0.493 Sum_probs=436.3
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
...++.+.|.+.++.+|+++|+++.+.++||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCC
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGD 171 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
+++++..+.+.+.++++.+++++++++............... ....++......... .......|.++.....
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 155 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP------ALEHVVICETEEDDP-HTEKMKTFTDFLAAGD 155 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC------CccEEEEEcCccccc-CccccccHHHHHhcCC
Confidence 999999999999999999999999999887766655443222 334444443322211 1112345666655433
Q ss_pred CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCc
Q 038104 172 PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGG 250 (567)
Q Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~ 250 (567)
.. .+......+++++++|||||||.||+|.++|.++..........++++++|+++..+|++|.+++.. ++.++..|+
T Consensus 156 ~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 156 PA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred CC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 21 1223356789999999999999999999999999888887777888999999999999999999875 677888999
Q ss_pred eeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCC-eeeccc
Q 038104 251 TNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGF-HVTHAY 328 (567)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~-~i~~~y 328 (567)
++++.+..++..+++.|+++++|++.++|.++..+++........++++|.+++||+++++++.+.+. .++. .+++.|
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~Y 314 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGY 314 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEE
Confidence 99888888999999999999999999999999999988766666788999999999999999999998 6788 899999
Q ss_pred cccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh
Q 038104 329 GLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE 408 (567)
Q Consensus 329 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 408 (567)
|+||+++++..+...... ......+|.|+++. .++++|. .+.+++.+ +.|||+++|+.++.||++++.
T Consensus 315 G~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 382 (513)
T PRK07656 315 GLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNVMKGYYDDPE 382 (513)
T ss_pred ccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchhhhhhcCCHH
Confidence 999998877765422111 11135789999997 8999986 56777766 789999999999999999999
Q ss_pred hhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEE
Q 038104 409 ATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFIS 487 (567)
Q Consensus 409 ~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 487 (567)
.+...+. +|||+|||+|+++++|.+++.||.+|+++++|.+++|.+||++|.++++|.+++|++.+++..|+.+.++|+
T Consensus 383 ~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~ 462 (513)
T PRK07656 383 ATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVV 462 (513)
T ss_pred HHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEE
Confidence 9988887 899999999999999999999999999999999999999999999999999999999999888888999998
Q ss_pred eecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 488 VKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
..++. ..+.+++++++++.++.+.+|..++++++||+|++||++|+.|++
T Consensus 463 ~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 463 LKPGA-----ELTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred ECCCC-----CCCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 76543 567789999999999999999999999999999999999999975
No 30
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-67 Score=560.74 Aligned_cols=513 Identities=26% Similarity=0.395 Sum_probs=430.2
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
+.+++|+.++++++++++|+++|+.+.+..+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 107 (573)
T PRK05605 28 DYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGA 107 (573)
T ss_pred CCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 34457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCC----------------
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSP---------------- 153 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~---------------- 153 (567)
+++|++|.++.+++.++++.++++++|++......+.+..... ....++.++.....
T Consensus 108 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (573)
T PRK05605 108 VVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT-------PLETIVSVNMIAAMPLLQRLALRLPIPALR 180 (573)
T ss_pred EEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc-------ccceeEeeeccccccccccccccccccccc
Confidence 9999999999999999999999999999887666555443221 12233333211000
Q ss_pred ------CCccCCcccHHHHHhcCCCCC---CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc-cC-C
Q 038104 154 ------TGIRFGEFEYEQFVQMGDPRF---LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW-EM-G 222 (567)
Q Consensus 154 ------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~-~~-~ 222 (567)
.....+...|.++........ ........+++++++|||||||.||+|.++|+++...+......+ ++ .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 260 (573)
T PRK05605 181 KARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGD 260 (573)
T ss_pred ccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCC
Confidence 001123345666554422210 111224568999999999999999999999999887665433322 22 3
Q ss_pred CCCEEEEecchHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceE
Q 038104 223 SAPVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQ 301 (567)
Q Consensus 223 ~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~ 301 (567)
.+++++...|++|.+|+.. ++.++..|+++++.+..++..+++.++++++|++.++|.+++.|++........++++|.
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 340 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRN 340 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccE
Confidence 4789999999999998765 556778899999988889999999999999999999999999999877666677889999
Q ss_pred EEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCC-C
Q 038104 302 ILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDT-M 379 (567)
Q Consensus 302 ~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~-~ 379 (567)
+++||+++++++.+.+. .++.++++.||+||+++++..+.... ......+|.|.++. .++++|.+. +
T Consensus 341 i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~~~ 409 (573)
T PRK05605 341 AFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPEDPD 409 (573)
T ss_pred EEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCCCC
Confidence 99999999999999998 46899999999999987766542111 11234689999997 999999765 5
Q ss_pred CCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 380 SSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 380 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
.+++.+ +.|||+++|+.++.||++++..+...|.+|||+|||+|+++++|.+++.||.+|+++.+|.+|+|.+||+++
T Consensus 410 ~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l 487 (573)
T PRK05605 410 ETMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVL 487 (573)
T ss_pred ccCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHH
Confidence 666666 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHH
Q 038104 460 FRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQ 539 (567)
Q Consensus 460 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~ 539 (567)
..++.|.+++|++.+++..++.+++++++.++. ..+.++|++++++.++.+++|..++++++||+|.+||++|++
T Consensus 488 ~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~ 562 (573)
T PRK05605 488 REHPGVEDAAVVGLPREDGSEEVVAAVVLEPGA-----ALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRRE 562 (573)
T ss_pred HhCcccceEEEEeeecccCCeEEEEEEEECCCC-----CCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHH
Confidence 999999999999999988889999999887664 567899999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 038104 540 LRALAKNF 547 (567)
Q Consensus 540 l~~~~~~~ 547 (567)
|++++.+.
T Consensus 563 L~~~~~~~ 570 (573)
T PRK05605 563 VREELLEK 570 (573)
T ss_pred HHHHHHHH
Confidence 99988654
No 31
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-68 Score=562.07 Aligned_cols=507 Identities=22% Similarity=0.345 Sum_probs=422.4
Q ss_pred CCCHH-HHHHHHHH-HcCCceEEEeCC----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhh
Q 038104 13 PLSPL-TFLKRAAA-VYGNRTSIIYEG----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPM 86 (567)
Q Consensus 13 ~~tl~-~~l~~~a~-~~p~~~a~~~~~----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (567)
.+++. +++++++. .+|+++|+.+.+ +++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~ 120 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALK 120 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 45555 57888776 579999998743 6899999999999999999999999999999999999999999999999
Q ss_pred ccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHH
Q 038104 87 AEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQF 166 (567)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 166 (567)
+|++++|+++.++.+++.++++.++++.++++.......... ..+ ....++.+++... ...+...+.++
T Consensus 121 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~---~~~~~~~~~~~ 189 (570)
T PRK04319 121 NGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLP------SLKHVLLVGEDVE---EGPGTLDFNAL 189 (570)
T ss_pred cCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCC------CceEEEEECCCcC---CCcCccCHHHH
Confidence 999999999999999999999999999999987764433211 111 2344555543221 12233566666
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHH
Q 038104 167 VQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGV 245 (567)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~ 245 (567)
........ +......+++++++|||||||.||+|.++|++++.+.......+++.++|++++..|++|.+|+.. ++.+
T Consensus 190 ~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 268 (570)
T PRK04319 190 MEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAP 268 (570)
T ss_pred HhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHH
Confidence 55433322 222345678999999999999999999999999888777777788999999999999999988754 7788
Q ss_pred HhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhC
Q 038104 246 AARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLG 321 (567)
Q Consensus 246 ~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~ 321 (567)
+..|+++++.. .+++..+++.|+++++|++.++|++++.|.+.... ....+++++.+++||+++++++.+++. .++
T Consensus 269 l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g 348 (570)
T PRK04319 269 WLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFG 348 (570)
T ss_pred HhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhC
Confidence 88999988875 57999999999999999999999999999876432 234678999999999999999999988 569
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEec--Ccc
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRG--SSI 399 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~--~~~ 399 (567)
.++++.||+||++++++..... .......+|.|+++. .+++++. ++.+++.| +.|||+++| +.+
T Consensus 349 ~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~~ 414 (570)
T PRK04319 349 LPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIKKGWPSM 414 (570)
T ss_pred CCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEcCCCChH
Confidence 9999999999998765432110 011235789999998 8999886 55666666 889999997 899
Q ss_pred chhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCC
Q 038104 400 MKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWG 479 (567)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (567)
+.||+++++.+.+.|.+|||+|||+++++++|.+++.||.+|+|+.+|++|+|.+||++|.++|.|.+++|++.+++..|
T Consensus 415 ~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g 494 (570)
T PRK04319 415 MRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRG 494 (570)
T ss_pred HhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+.++++++..++... .....++|+++++++++.|++|+.++++++||+|++||++|+.|+++..++
T Consensus 495 ~~~~a~v~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 560 (570)
T PRK04319 495 EIIKAFVALRPGYEP--SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGL 560 (570)
T ss_pred eEEEEEEEECCCCCC--CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCC
Confidence 999999988765411 011236899999999999999999999999999999999999999986543
No 32
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-67 Score=556.58 Aligned_cols=506 Identities=24% Similarity=0.360 Sum_probs=417.1
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.|+.++|++.++.+|+++|+++.++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 489999999999999999999988999999999999999999997 6999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCC-------------------
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSP------------------- 153 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~------------------- 153 (567)
|++|.++.+++.++++.++++++|++......+.+..... ..+.++..+.....
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-------GVKHVIVTEVADMLPPLKRLLINAVVKHVKKMV 176 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-------CcceeEEecccccccchhhhhcccchhhccccc
Confidence 9999999999999999999999999887666555443221 12222222110000
Q ss_pred -CCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc--cCCC-CCEEEE
Q 038104 154 -TGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW--EMGS-APVYLW 229 (567)
Q Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~--~~~~-~d~~~~ 229 (567)
.........+.+.+..............++++++++|||||||.||+|.++|+++..........+ .+.. .+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK05677 177 PAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIA 256 (562)
T ss_pred cccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEE
Confidence 000112234444443332222222234568999999999999999999999999977665544333 2343 468899
Q ss_pred ecchHhhhhHHH-HHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCC
Q 038104 230 SLPMFHCNGWTF-TWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGA 307 (567)
Q Consensus 230 ~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~ 307 (567)
.+|++|.+++.. .+..+..|++.++.+ ..++..+++.|+++++|.+.++|+++..++.........++++|.+++||+
T Consensus 257 ~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~ 336 (562)
T PRK05677 257 PLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGM 336 (562)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCc
Confidence 999999999865 455666777766665 468899999999999999999999999998765444445679999999999
Q ss_pred CCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 308 PPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 308 ~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
++++++.+.+. .+++++++.||+||+++++..+... ......+|.|+++. .++++|. ++.+++.|
T Consensus 337 ~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g- 402 (562)
T PRK05677 337 ALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDD-DGNELPLG- 402 (562)
T ss_pred cCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECC-CCCCCCCC-
Confidence 99999999988 4599999999999998766543211 11124689999998 9999986 46777777
Q ss_pred cceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCc
Q 038104 387 KTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRV 465 (567)
Q Consensus 387 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 465 (567)
+.|||+++|+.++.||+++++.+.+.|. +|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||++|.++++|
T Consensus 403 -~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v 481 (562)
T PRK05677 403 -EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGV 481 (562)
T ss_pred -CCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCc
Confidence 7899999999999999999999999986 89999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 466 LEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 466 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
.+++|++++++..|+.++++++..++. ..+.+++++++++.++.|++|..|+++++||+|++||++|++|+++..
T Consensus 482 ~~~~v~g~~~~~~g~~~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~ 556 (562)
T PRK05677 482 LQCAAIGVPDEKSGEAIKVFVVVKPGE-----TLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEEL 556 (562)
T ss_pred cEEEEEeccCccCCceEEEEEEeCCCC-----CCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHH
Confidence 999999999998898999998876554 567889999999999999999999999999999999999999988654
Q ss_pred h
Q 038104 546 N 546 (567)
Q Consensus 546 ~ 546 (567)
+
T Consensus 557 ~ 557 (562)
T PRK05677 557 K 557 (562)
T ss_pred H
Confidence 3
No 33
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.9e-68 Score=569.16 Aligned_cols=513 Identities=21% Similarity=0.297 Sum_probs=396.8
Q ss_pred CCHHHHHHHHHHHcCCceEEEeC----C-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHh
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYE----G-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAV 84 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (567)
.|+.++|++.++++||++|+.+. + ..+||+||.++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 39999999999999999999841 1 35899999999999999999999999999999999999999999999
Q ss_pred hhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-----CccCC
Q 038104 85 PMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-----GIRFG 159 (567)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~~~~~ 159 (567)
+++|++++|+++.++.+++.++++.++++++|++.+....+....... ......++.++...... .....
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~l~~vi~~~~~~~~~~~~~~~~~~~ 199 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNS-----TEYMKTVVSFGGVSREQKEEAETFGLV 199 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccc-----cccceEEEEeCCCChHHhhhhhhcCcE
Confidence 999999999999999999999999999999999877544443222110 00234566554321000 00111
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc-----cCCCCCEEEEecchH
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW-----EMGSAPVYLWSLPMF 234 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~ 234 (567)
...|.++...+.....+.....++++++|+|||||||.||||+++|++++..+......+ ++.++|++++.+|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 279 (666)
T PLN02614 200 IYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLA 279 (666)
T ss_pred EEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHH
Confidence 345666665432221112224578999999999999999999999999987766544332 567899999999999
Q ss_pred hhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcc----------------------
Q 038104 235 HCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE---------------------- 292 (567)
Q Consensus 235 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~---------------------- 292 (567)
|.+++...+..+..|+++++.+ .++..+++.|++++||+++++|++++.+.......
T Consensus 280 H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (666)
T PLN02614 280 HIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGN 358 (666)
T ss_pred HHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9999876666677888887764 68999999999999999999999999886421000
Q ss_pred ----------------------cccC-CCceEEEEcCCCCCHHHHHHHHHh-CCeeeccccccccCCCccccccccccCC
Q 038104 293 ----------------------RKEI-ASPVQILTGGAPPPASLLEEIELL-GFHVTHAYGLTEATGPALVCEWQSSWNQ 348 (567)
Q Consensus 293 ----------------------~~~l-~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 348 (567)
...+ +++|.+++||+++++.+.+.++.+ ++++++.||+||+++..+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~------- 431 (666)
T PLN02614 359 MKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSL------- 431 (666)
T ss_pred HHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeec-------
Confidence 0012 589999999999999876555566 589999999999976543321
Q ss_pred CCCchhhhhccccCceeeeecceEEeeCCC--CCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEE
Q 038104 349 LPKPDQAKLKARQGISILTLADVDVKNLDT--MSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGV 426 (567)
Q Consensus 349 ~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~--~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~ 426 (567)
+. .......+|.|+++. +++|+|.++ +.+++.+ +.|||+++||+++.|||++|+.|.+.|.+|||+|||+|+
T Consensus 432 -~~--~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~ 505 (666)
T PLN02614 432 -PD--ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGE 505 (666)
T ss_pred -cc--cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEE
Confidence 00 011235789999998 999998433 2455555 789999999999999999999999999999999999999
Q ss_pred EecCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC-----CCCCCC-
Q 038104 427 IHPDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA-----GKTDDV- 499 (567)
Q Consensus 427 ~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~-----~~~~~~- 499 (567)
+|+||++++.||.+|+|| .+|++|+|.+||++|.++|.|.+++|++.+... .++|+|++..... ..+...
T Consensus 506 ~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~---~l~alvv~~~~~~~~~~~~~~~~~~ 582 (666)
T PLN02614 506 WQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFES---FLVAIANPNQQILERWAAENGVSGD 582 (666)
T ss_pred EcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcc---eEEEEEeCCHHHHHHHHHhcCCCcC
Confidence 999999999999999999 579999999999999999999999999976322 4788887653210 000000
Q ss_pred ---------CHHHHHHHH-----HhhCCCCccccEEEEeCC-C-----CCCCCCccchHHHHHHHHhhh
Q 038104 500 ---------NEADILSYC-----RENLSRFMVPKKVVILPE-L-----PKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 500 ---------~~~~l~~~~-----~~~l~~~~~p~~i~~v~~-~-----P~t~~GKv~r~~l~~~~~~~~ 548 (567)
..+.+.+.+ ++.|+.|.++++|.++.+ | ..|+++|++|+.+++.|++..
T Consensus 583 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i 651 (666)
T PLN02614 583 YNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVI 651 (666)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHH
Confidence 112233333 346999999999998763 4 489999999999999998854
No 34
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-67 Score=552.50 Aligned_cols=517 Identities=26% Similarity=0.395 Sum_probs=429.9
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
+...++|+.+++.+.++++|+++|+.+.+.++||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++++++..+.+++.++++.++++.++++.+....+........ ....++.+.... ....+.++..
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~ 148 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP------DLTHVVAIGGAR-------AGLDYEALVA 148 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC------cCceEEEeCCCc-------ccccHHHHHh
Confidence 999999999999999999999999999999876655544332211 233444443321 1235555554
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc--cCCCCCEEEEecchHhhhhHHHHHHHH
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW--EMGSAPVYLWSLPMFHCNGWTFTWGVA 246 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~ 246 (567)
..............+++++++|||||||.||+|.++|+++..........+ +...+|+++..+|++|..++..++ .+
T Consensus 149 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~ 227 (528)
T PRK07470 149 RHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QV 227 (528)
T ss_pred cCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HH
Confidence 332222222335668999999999999999999999999865444332222 467889999999999999986544 56
Q ss_pred hhCceeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCe
Q 038104 247 ARGGTNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFH 323 (567)
Q Consensus 247 ~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 323 (567)
+.|++.++.+ .+++..+++.|+++++|++.++|++++.+++........++++|.+++||+++++...+++. .++.+
T Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~ 307 (528)
T PRK07470 228 ARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGKV 307 (528)
T ss_pred hcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcH
Confidence 7777777665 46889999999999999999999999999887655556788999999999999999998887 56889
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||+++.+..+..... .. ..........+|.|.++. .+++.|. ++.+++.+ +.|||+++|+.++.||
T Consensus 308 ~~~~YG~TE~~~~~~~~~~~~~--~~-~~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gy 380 (528)
T PRK07470 308 LVQYFGLGEVTGNITVLPPALH--DA-EDGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVIGPAVFAGY 380 (528)
T ss_pred HHHhCCCcccCCceeecchhhc--cc-cccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEeCCccchhh
Confidence 9999999999876654321100 00 000112335779999998 8899885 66777776 7899999999999999
Q ss_pred cCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCcee
Q 038104 404 LKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPC 483 (567)
Q Consensus 404 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (567)
+++++.+...|.+|||+|||+|+++++|++++.||.||+++++|.+++|.+||..|.++++|.+++|++.+++..|+.++
T Consensus 381 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 460 (528)
T PRK07470 381 YNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGV 460 (528)
T ss_pred cCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhccc
Q 038104 484 AFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVSK 551 (567)
Q Consensus 484 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~~ 551 (567)
++++..++. ..+..++++++++.|+.|++|..++++++||+|++||++|+.|++++.+....+
T Consensus 461 ~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 523 (528)
T PRK07470 461 AVCVARDGA-----PVDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLLD 523 (528)
T ss_pred EEEEECCCC-----CCCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhccccc
Confidence 888876553 467889999999999999999999999999999999999999999988865443
No 35
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-67 Score=564.86 Aligned_cols=519 Identities=21% Similarity=0.279 Sum_probs=415.7
Q ss_pred CCCH-HHHHHHHHHHcCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 13 PLSP-LTFLKRAAAVYGNRTSIIYE------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 13 ~~tl-~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
.+|+ .++++++++.+|+++|+++. .+++||+||.++++++|++|.++|+++||+|+++++|+++++++++||+
T Consensus 51 ~~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 130 (629)
T PRK10524 51 RTNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACA 130 (629)
T ss_pred EeeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3444 56788888889999999872 3689999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCChHHHHHHHHhcCceEEEEcccc---------hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-C
Q 038104 86 MAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY---------VQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-G 155 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~ 155 (567)
++|++++++++.++.+++.++++.++++++|+++.. .+.+.++...... ....++.++...... .
T Consensus 131 ~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~vi~~~~~~~~~~~ 205 (629)
T PRK10524 131 RIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQH-----KPRHVLLVDRGLAPMAR 205 (629)
T ss_pred HhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCC-----CCCEEEEEeCCCCCcCc
Confidence 999999999999999999999999999999997642 2334444332210 234555555321111 1
Q ss_pred ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhH-hhhhccCCCCCEEEEecchH
Q 038104 156 IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLS-LILGWEMGSAPVYLWSLPMF 234 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~ 234 (567)
.......|.++.........+......+++++++|||||||.||+|.++|.+++..... ....+++.++|++++..|+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 285 (629)
T PRK10524 206 VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIG 285 (629)
T ss_pred ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCC
Confidence 11123456665543322222222345689999999999999999999999987544433 34456788999999999999
Q ss_pred hhhhHHH-HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCC
Q 038104 235 HCNGWTF-TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGA 307 (567)
Q Consensus 235 ~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~ 307 (567)
|..+..+ ++.+++.|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ....++++|.+++||+
T Consensus 286 ~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 286 WVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGE 365 (629)
T ss_pred eeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCC
Confidence 9888654 7778889999988753 4688999999999999999999999998775432 3346789999999999
Q ss_pred CCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 308 PPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 308 ~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
++++++.+++. .+++++++.||+||++..++...... .........+|.|+++. .++++|.+++.+++.+
T Consensus 366 ~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g- 436 (629)
T PRK10524 366 PLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV-------EDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN- 436 (629)
T ss_pred CCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc-------ccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC-
Confidence 99999999988 56999999999999985443321100 00011235689999998 8999997677788777
Q ss_pred cceeEEEEecC---ccchhccCChhhhhhcc----cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 387 KTMGEIVLRGS---SIMKGYLKNEEATSQSF----KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 387 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
+.|||+++|| ..+.||+++++.+.+.+ .++||+|||+|+++++|.+++.||+||+|+++|.+|+|.+||.+|
T Consensus 437 -~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l 515 (629)
T PRK10524 437 -EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESI 515 (629)
T ss_pred -CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHH
Confidence 8899999998 57889999998776543 468999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCC---CCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccc
Q 038104 460 FRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKT---DDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQ 536 (567)
Q Consensus 460 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~---~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~ 536 (567)
.++|+|.+++|++++++..|+.++++|+..++..... .....++|+++++++++.|++|..|+++++||+|++||++
T Consensus 516 ~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~ 595 (629)
T PRK10524 516 SSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLL 595 (629)
T ss_pred HhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchH
Confidence 9999999999999999988999999999876531100 0112467999999999999999999999999999999999
Q ss_pred hHHHHHHHHh
Q 038104 537 KFQLRALAKN 546 (567)
Q Consensus 537 r~~l~~~~~~ 546 (567)
|+.|++....
T Consensus 596 R~~L~~~~~~ 605 (629)
T PRK10524 596 RRAIQAIAEG 605 (629)
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 36
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-67 Score=547.37 Aligned_cols=482 Identities=21% Similarity=0.323 Sum_probs=413.5
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
|++.++|+++++++|+++|+.+.+.++||.||.++++++|.+|.+.|. +||+|+|+++|+++++++++||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 678999999999999999999999999999999999999999999884 8999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++.++.+++.++++.++++.++++......+.. ....++..++ +.+........
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~------------~~~~~~~~~~-------------~~~~~~~~~~~ 134 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPD------------EEGRVIEIDE-------------WKRMIEKYLPT 134 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhh------------ccceEEEehh-------------hhhhhhhcccc
Confidence 9999999999999999999999998765443321 1122332221 11111111111
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNV 253 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~ 253 (567)
..+ .....+++++++|||||||.||+|.++|++++.+.......+++.++|+++...|++|..++...+.++..|++++
T Consensus 135 ~~~-~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~ 213 (487)
T PRK07638 135 YAP-IENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVH 213 (487)
T ss_pred ccc-cccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEE
Confidence 111 1133467899999999999999999999999888887777888999999999999999988777888899999999
Q ss_pred eeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeecccccc
Q 038104 254 CLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTHAYGLT 331 (567)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~~yG~t 331 (567)
+.+.+++..+++.++++++|++.++|+++..|.+... ...+.+.++++|+.++++..+++.. + ++++++.||+|
T Consensus 214 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~t 289 (487)
T PRK07638 214 LMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGAS 289 (487)
T ss_pred EcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCC
Confidence 9999999999999999999999999999999987632 2346677889999999999999984 4 78999999999
Q ss_pred ccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhh
Q 038104 332 EATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATS 411 (567)
Q Consensus 332 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 411 (567)
|++.++..+.. ........+|.|+++. .++|+|. ++.+++.| +.|||+++|+.++.||+++++.+.
T Consensus 290 E~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~ 355 (487)
T PRK07638 290 ELSFVTALVDE----------ESERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMGYIIGGVLAR 355 (487)
T ss_pred ccCceEEeccc----------ccCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceeeecCCHHHHh
Confidence 99876554321 1112235789999997 9999986 56777776 789999999999999999999888
Q ss_pred hcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecC
Q 038104 412 QSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTN 491 (567)
Q Consensus 412 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 491 (567)
+.+.+|||+|||+|++|++|.+++.||.+|+|+.+|.+|+|.+||+++.++|+|.+++|++.+++..|+.+++++..
T Consensus 356 ~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~--- 432 (487)
T PRK07638 356 ELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG--- 432 (487)
T ss_pred hhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC---
Confidence 88889999999999999999999999999999999999999999999999999999999999999889888888763
Q ss_pred CCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhc
Q 038104 492 SAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAV 549 (567)
Q Consensus 492 ~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~ 549 (567)
..+.+++++++++.++.|++|..++++++||+|++||++|+.|++++.+.+.
T Consensus 433 ------~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 484 (487)
T PRK07638 433 ------SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEK 484 (487)
T ss_pred ------CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccc
Confidence 3467899999999999999999999999999999999999999999887654
No 37
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.3e-67 Score=561.51 Aligned_cols=514 Identities=20% Similarity=0.235 Sum_probs=400.1
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
..|.+.....+..+...+.++++|+++.+ +++||+||.+++.++|++|.+.|+++||+|+++++|++++++++||
T Consensus 79 ~~wf~~~~~n~~~~~~~~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA 158 (652)
T TIGR01217 79 AQWFPGARLNYAENLLRAAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLA 158 (652)
T ss_pred CEECCCCeeeHHHHHhccCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34533333334444444568899998843 5899999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccc---------hHHHHHHhhhhhccccCCCCCeEEEEeCCCCC-
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY---------VQLAREALKLYFVEDRDAAGPRVILIDDIDSP- 153 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~- 153 (567)
|+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.++...++ ....++.+......
T Consensus 159 ~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~ 232 (652)
T TIGR01217 159 TASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP------TLRAVVHIPYLGPRE 232 (652)
T ss_pred HHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC------CccEEEEEeCCCCcc
Confidence 99999999999999999999999999999999997653 344444443222 33455555432110
Q ss_pred --CCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHH-hhHhhhhccCCCCCEEEEe
Q 038104 154 --TGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLS-TLSLILGWEMGSAPVYLWS 230 (567)
Q Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~-~~~~~~~~~~~~~d~~~~~ 230 (567)
.........|.++................+++++++|||||||.||||+++|++++.. .......+++.++|++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~ 312 (652)
T TIGR01217 233 TEAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYY 312 (652)
T ss_pred cccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEe
Confidence 0001123456776544221111122345689999999999999999999999987543 3344455788999999999
Q ss_pred cchHhhhhHHHHHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcC--CcccccCCCceEEEE
Q 038104 231 LPMFHCNGWTFTWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAK--PEERKEIASPVQILT 304 (567)
Q Consensus 231 ~p~~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--~~~~~~l~~l~~~~~ 304 (567)
.|+.|..+ .+++.+++.|+++++.+. .++..+++.++++++|++.+.|.++..+.... ......++++|.+++
T Consensus 313 ~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~ 391 (652)
T TIGR01217 313 TTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAS 391 (652)
T ss_pred CCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEe
Confidence 99998753 345678899999998853 36789999999999999988888887776532 123456889999999
Q ss_pred cCCCCCHHHHHHHH-HhC--CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCC
Q 038104 305 GGAPPPASLLEEIE-LLG--FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSS 381 (567)
Q Consensus 305 ~g~~l~~~~~~~~~-~~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~ 381 (567)
||+++++++.+++. .++ ..+.+.||+||+++.+.... + ........+|.|.++. .++++|. ++.+
T Consensus 392 gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~--------~--~~~~~~g~~g~p~~g~-~v~ivd~-~g~~ 459 (652)
T TIGR01217 392 TGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGAN--------P--TLPVHIGEIQAPGLGT-AVQSWDP-EGKP 459 (652)
T ss_pred ecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCC--------C--CCCCcCCccCCCcCCC-ceEEECC-CCCC
Confidence 99999999999987 454 46778999999754333211 0 0001124578888888 8899886 4555
Q ss_pred cCCCCcceeEEEEecC--ccchhccCChhhhh--hc-cc--CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHH
Q 038104 382 VPRDGKTMGEIVLRGS--SIMKGYLKNEEATS--QS-FK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVE 454 (567)
Q Consensus 382 ~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 454 (567)
++ | +.|||+++|| .++.|||++++.+. +. |. +|||+|||+|++|+||++++.||+||+|+++|++|+|.+
T Consensus 460 ~~-g--~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 460 VT-G--EVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CC-C--CccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHH
Confidence 53 4 7899999996 58899999997543 22 22 688999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCc
Q 038104 455 LENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGK 534 (567)
Q Consensus 455 iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GK 534 (567)
||.+|.++|+|.+++|++++++..|+.++++|++.++... .....++|+++++++|+.|++|+.|+++++||+|++||
T Consensus 537 IE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGK 614 (652)
T TIGR01217 537 IYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATL--DDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGK 614 (652)
T ss_pred HHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCC--CHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCcc
Confidence 9999999999999999999999999999999998866410 01113689999999999999999999999999999999
Q ss_pred cchHHHHHHHHh
Q 038104 535 IQKFQLRALAKN 546 (567)
Q Consensus 535 v~r~~l~~~~~~ 546 (567)
++|+.|++.+..
T Consensus 615 i~r~~Lr~~~~~ 626 (652)
T TIGR01217 615 RVEVAVKRVLQG 626 (652)
T ss_pred ChHHHHHHHHcC
Confidence 999999998754
No 38
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-66 Score=547.81 Aligned_cols=509 Identities=30% Similarity=0.474 Sum_probs=435.8
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
..|+.+++.+.++.+|+++|+++.+..+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v 89 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHV 89 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|+++..+.+++.++++.+++++++++.+....+.+...... ...+.. ...............+.++......
T Consensus 90 ~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (523)
T PRK08316 90 PVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP-------VDTLIL-SLVLGGREAPGGWLDFADWAEAGSV 161 (523)
T ss_pred ecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC-------ccceee-eecccccccccchhhHHHHHhcCCC
Confidence 99999999999999999999999999887777665543221 011111 1111111111233445554443322
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCce
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGT 251 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~ 251 (567)
.. +......+++++++|||||||.||+|.++|+++..........+++.++|+++..+|++|..++.. ++..+..|++
T Consensus 162 ~~-~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 162 AE-PDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred cc-CccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 21 223356789999999999999999999999999888887777888999999999999999999865 4556778999
Q ss_pred eeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeecccc
Q 038104 252 NVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTHAYG 329 (567)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~~yG 329 (567)
+++.+..++..+++.++++++|++.++|.++..+++........+++++.+++||+.++.++.+.+++ + +.++++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 99988889999999999999999999999999998876656667889999999999999999999984 4 789999999
Q ss_pred ccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhh
Q 038104 330 LTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEA 409 (567)
Q Consensus 330 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 409 (567)
+||++.++..+... ........+|.|+++. .+++.+. ++.+++.+ +.|||+++|+.++.||+++++.
T Consensus 321 ~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~~~y~~~~~~ 387 (523)
T PRK08316 321 QTEIAPLATVLGPE---------EHLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLMLGYWDDPEK 387 (523)
T ss_pred ccccCccccccCcc---------ccccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchhhhhcCCHHH
Confidence 99998876654311 1112235689999987 8899985 56777776 8899999999999999999999
Q ss_pred hhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEee
Q 038104 410 TSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVK 489 (567)
Q Consensus 410 ~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~ 489 (567)
+.+.|.++||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||+.+.++++|.+++|++.+++..++.++++++..
T Consensus 388 ~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 467 (523)
T PRK08316 388 TAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPK 467 (523)
T ss_pred HHHHhhCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999887
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 490 TNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
++. ..+.+++.++++++++.|++|..+++++++|+|++||++|++|++++.+..
T Consensus 468 ~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 468 AGA-----TVTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred CCC-----CCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 654 456788999999999999999999999999999999999999999998653
No 39
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.9e-67 Score=561.12 Aligned_cols=512 Identities=23% Similarity=0.322 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHHcCCceEEEeC-------C--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHh
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYE-------G--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAV 84 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (567)
.|+.++|.+.++++|+++|+... + +.+||+||.++++++|++|.++|+++||+|+|+++|+++|+++++||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999641 1 47999999999999999999999999999999999999999999999
Q ss_pred hhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-----CccCC
Q 038104 85 PMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-----GIRFG 159 (567)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~~~~~ 159 (567)
+++|++++|+++.++.+++.++++.++++++|++.+..+.+........ ...+.++.+++..... .....
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~-----~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCS-----SNLKTIVSFGDVSSEQKEEAEELGVS 197 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCC-----CCCEEEEEECCCChhhhhhhhcCCcE
Confidence 9999999999999999999999999999999998776555544332211 0234566654321100 00112
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc-----CCCCCEEEEecchH
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE-----MGSAPVYLWSLPMF 234 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~-----~~~~d~~~~~~p~~ 234 (567)
...|.++........ +.....++++++++|||||||.||||+++|++++..+......++ +.++|++++.+|++
T Consensus 198 ~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 276 (660)
T PLN02861 198 CFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLA 276 (660)
T ss_pred EEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHH
Confidence 345666665432221 122346789999999999999999999999999887766544433 46789999999999
Q ss_pred hhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcC-------------------------
Q 038104 235 HCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAK------------------------- 289 (567)
Q Consensus 235 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~------------------------- 289 (567)
|.+++...+.+++.|+++++. ..++..+++.|++++||+++++|++++.|.+..
T Consensus 277 H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~ 355 (660)
T PLN02861 277 HVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGN 355 (660)
T ss_pred HHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 999987666678889888776 468899999999999999999999999886410
Q ss_pred ------------Cccc-------ccC-CCceEEEEcCCCCCHHHHHHHHHhC-CeeeccccccccCCCccccccccccCC
Q 038104 290 ------------PEER-------KEI-ASPVQILTGGAPPPASLLEEIELLG-FHVTHAYGLTEATGPALVCEWQSSWNQ 348 (567)
Q Consensus 290 ------------~~~~-------~~l-~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~ 348 (567)
.... ..+ +++|.+++||+++++++.+.++.++ ..+++.||+||+++.++.....
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~----- 430 (660)
T PLN02861 356 LRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN----- 430 (660)
T ss_pred HhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc-----
Confidence 0000 012 5789999999999999876555665 4799999999998665432110
Q ss_pred CCCchhhhhccccCceeeeecceEEeeCCC-C-CCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEE
Q 038104 349 LPKPDQAKLKARQGISILTLADVDVKNLDT-M-SSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGV 426 (567)
Q Consensus 349 ~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~-~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~ 426 (567)
......++|.|+++. ++++++.+. + .....+ +.|||+++||+++.|||++|+.|.+.|.+|||+|||+|+
T Consensus 431 -----~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~ 502 (660)
T PLN02861 431 -----VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGE 502 (660)
T ss_pred -----cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEE
Confidence 011235789999998 999987422 2 122222 569999999999999999999999999999999999999
Q ss_pred EecCCcEEEEccCCceeee-CceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCC-----CCCCCCCC
Q 038104 427 IHPDGYLEIKDRSKDVIIS-GGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNS-----AGKTDDVN 500 (567)
Q Consensus 427 ~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-----~~~~~~~~ 500 (567)
+|+||++++.||+||+||. +|++|+|.+||++|.++|.|.+++|++.+ .++.++|+|++.... ...+...+
T Consensus 503 ~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~~~~~~~~~~ 579 (660)
T PLN02861 503 WQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDWAANNNKTGD 579 (660)
T ss_pred ECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHHHHHcCCCCC
Confidence 9999999999999999995 89999999999999999999999999976 345788888875321 00000011
Q ss_pred H----------HHHHHHHHh-----hCCCCccccEEEEeC-CC-----CCCCCCccchHHHHHHHHhhh
Q 038104 501 E----------ADILSYCRE-----NLSRFMVPKKVVILP-EL-----PKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 501 ~----------~~l~~~~~~-----~l~~~~~p~~i~~v~-~~-----P~t~~GKv~r~~l~~~~~~~~ 548 (567)
. ..+.+.+++ .++.|..++.+.+.+ .| .+|+++|++|+.+++.|++..
T Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I 648 (660)
T PLN02861 580 FKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCI 648 (660)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHH
Confidence 1 224444443 388899999888865 56 899999999999999998864
No 40
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-66 Score=546.89 Aligned_cols=521 Identities=29% Similarity=0.480 Sum_probs=428.9
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEe--CC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIY--EG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~--~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
...|+|+.++|++.|+++|++++++. .+ +++||+||.++++++|++|.++|+++||+|+++++|+++++++++||+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~ 85 (542)
T PRK06018 6 QDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIM 85 (542)
T ss_pred hcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 34578999999999999999999985 23 789999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-CccCCcccHH
Q 038104 86 MAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-GIRFGEFEYE 164 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~ 164 (567)
++|++++++++..+.+++.++++.++++.++++.+..+.+.++....+ ....++.+.+..... ........|.
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (542)
T PRK06018 86 GIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP------SVERYVVLTDAAHMPQTTLKNAVAYE 159 (542)
T ss_pred hcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC------CccEEEEecccccccccCccccccHH
Confidence 999999999999999999999999999999999988777766554332 234444444322111 1111334566
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHH-h-hHhhhhccCCCCCEEEEecchHhhhhHHHH
Q 038104 165 QFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLS-T-LSLILGWEMGSAPVYLWSLPMFHCNGWTFT 242 (567)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~-~-~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 242 (567)
++......... ......+++++++|||||||.||+|.++|++.+.. . ......+++..+|+++...|++|.+++...
T Consensus 160 ~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~ 238 (542)
T PRK06018 160 EWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIA 238 (542)
T ss_pred HHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHH
Confidence 55544332221 12345678999999999999999999999974322 2 223445678899999999999999998877
Q ss_pred HHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhC
Q 038104 243 WGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLG 321 (567)
Q Consensus 243 ~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~ 321 (567)
+.++..|+++++.. .+++..+++.++++++|.+.++|+++..+.+........++++|.++++|+++++++.+.+++++
T Consensus 239 ~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~ 318 (542)
T PRK06018 239 FSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFEDMG 318 (542)
T ss_pred HhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHhC
Confidence 77888898887764 56888999999999999999999999999887665556778999999999999999999998889
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK 401 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 401 (567)
+++++.||+||++.+++.+.....................|.|.++. .+++.|. ++.+++.++...|||+++|+.++.
T Consensus 319 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel~i~g~~~~~ 396 (542)
T PRK06018 319 VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRLKVRGPAVAA 396 (542)
T ss_pred CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEEEEecCCcch
Confidence 99999999999998776554332222222222222234678898887 8888886 566666654467999999999999
Q ss_pred hccCChhhhhhcc-cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 402 GYLKNEEATSQSF-KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 402 gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
||++... ..+ .+|||+|||+++++++|.+++.||.+|+++.+|.+++|.+||..+.++|+|.+++|++.+++..++
T Consensus 397 gy~~~~~---~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 473 (542)
T PRK06018 397 AYYRVDG---EILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDE 473 (542)
T ss_pred hhhcCcc---cEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCc
Confidence 9998422 222 478999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
.+.++|+..++. ..+.+++.++++++++.|++|..++++++||+|.+||++|++|++++.++
T Consensus 474 ~~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 474 RPLLIVQLKPGE-----TATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred eeEEEEEeCCCC-----CCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 899998887664 56778999999999999999999999999999999999999999999885
No 41
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-67 Score=553.38 Aligned_cols=513 Identities=20% Similarity=0.255 Sum_probs=406.7
Q ss_pred ccccCCCCCHHHHHHHHHHHcCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHh
Q 038104 7 CEANYVPLSPLTFLKRAAAVYGNRTSIIYE--GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAV 84 (567)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (567)
-.|...+.|+.+.|.+.|+++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 7 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~ 86 (540)
T PRK05857 7 QAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLAC 86 (540)
T ss_pred cccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHH
Confidence 346667789999999999999999999863 368999999999999999999999999999999999999999999999
Q ss_pred hhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHH
Q 038104 85 PMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYE 164 (567)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 164 (567)
+++|++++|+++.++.+++.++++.++++.++++.............. ....++.++...... .+.
T Consensus 87 ~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------~~~ 152 (540)
T PRK05857 87 AKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEAL-------HSIPVIAVDIAAVTR-------ESE 152 (540)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccc-------cccceeEeecccccc-------ccc
Confidence 999999999999999999999999999999999876532211111000 111233333211100 000
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh----hhccCCCCCEEEEecchHhhhhHH
Q 038104 165 QFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI----LGWEMGSAPVYLWSLPMFHCNGWT 240 (567)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~ 240 (567)
........ ........+++++++|||||||.||+|.++|+++..+..... ..+....+++++..+|++|..++.
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~ 230 (540)
T PRK05857 153 HSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW 230 (540)
T ss_pred cccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH
Confidence 00000000 011224567999999999999999999999999876543322 123456778999999999999988
Q ss_pred HHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHh
Q 038104 241 FTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELL 320 (567)
Q Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~ 320 (567)
..+.+++.|+++++ ...++..+++.|+++++|.+.++|+++..|..........++++|.+++||++++....+++..+
T Consensus 231 ~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~ 309 (540)
T PRK05857 231 WILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIEAT 309 (540)
T ss_pred HHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHHHh
Confidence 88888888998764 55688899999999999999999999999988765556678899999999999998887666677
Q ss_pred CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCC---CCcceeEEEEecC
Q 038104 321 GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPR---DGKTMGEIVLRGS 397 (567)
Q Consensus 321 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~---~~~~~Gel~v~~~ 397 (567)
++++++.||+||++.....+..... .........+|.|+++. .++|++.+...+++. ..++.|||+++|+
T Consensus 310 g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~ 382 (540)
T PRK05857 310 GVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGTLWIKSP 382 (540)
T ss_pred CCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcceEEEeCc
Confidence 9999999999999854433221100 00011235689999998 899998754433322 1237899999999
Q ss_pred ccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCC
Q 038104 398 SIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQ 477 (567)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 477 (567)
+++.||+++++.+.+.|.+|||+|||+|++|++|.+++.||.+|+|+++|++|+|.+||.+|..+|+|.+++|+++++..
T Consensus 383 ~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~ 462 (540)
T PRK05857 383 ANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEE 462 (540)
T ss_pred chhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEeecCCCCCCCCCCH----HHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 478 WGESPCAFISVKTNSAGKTDDVNE----ADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 478 ~g~~~~~~v~~~~~~~~~~~~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
.++.++++++..++.. .... +.+.+.+++.++.|++|..++++++||+|++||++|+.|++++.+.
T Consensus 463 ~~~~~~~~vv~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 463 FGALVGLAVVASAELD----ESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred cccceEEEEEeCCCCC----hhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhc
Confidence 8888888877654321 1112 3344556677999999999999999999999999999999888753
No 42
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.6e-66 Score=545.77 Aligned_cols=511 Identities=23% Similarity=0.376 Sum_probs=428.8
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCC-eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEG-ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.|.+.|+.+++++.++.+||++|+++.+ +++||+||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4677899999999999999999999875 799999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccc-----hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccH
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQY-----VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEY 163 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 163 (567)
++++|+++..+.+++.++++.+++++++++... .+.+.+...... ....++..+...... ....+
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~ 168 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP------QLQQIVGVDKLAPAT----SSLSL 168 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC------CCcEEEEeCCcCCCc----CccCH
Confidence 999999999999999999999999999997543 233333322221 334555554432111 12345
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-H
Q 038104 164 EQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-T 242 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~ 242 (567)
.++........ .......+++++++|||||||.||+|.++|+++..........+++.++|+++...|++|.+|+.. +
T Consensus 169 ~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 247 (547)
T PRK06087 169 SQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGV 247 (547)
T ss_pred HHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHH
Confidence 55544332211 122345689999999999999999999999999888877777778899999999999999999764 6
Q ss_pred HHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCC
Q 038104 243 WGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGF 322 (567)
Q Consensus 243 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~ 322 (567)
+.++..|+++++...+++..+++.|++++++++.++|+.+..++.........++++|.+++||+++++++.+.+...++
T Consensus 248 ~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~~~ 327 (547)
T PRK06087 248 TAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQRGI 327 (547)
T ss_pred HHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHcCC
Confidence 66778899999998899999999999999999999888887787765555567789999999999999999998887799
Q ss_pred eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchh
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKG 402 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 402 (567)
++++.||+||++++.+..... .........|.|.++. .++++|. .+.+++.+ +.|||+++|++++.|
T Consensus 328 ~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~g 394 (547)
T PRK06087 328 KLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEASRGPNVFMG 394 (547)
T ss_pred cEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEEEeccccccc
Confidence 999999999998776543210 0111224578898887 8899885 56777766 789999999999999
Q ss_pred ccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCc
Q 038104 403 YLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGES 481 (567)
Q Consensus 403 y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (567)
|+++++.+...+. +|||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||++|.++|+|.+++|++.+++..|++
T Consensus 395 y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 474 (547)
T PRK06087 395 YLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGER 474 (547)
T ss_pred ccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCce
Confidence 9999999888875 789999999999999999999999999999999999999999999999999999999999988999
Q ss_pred eeEEEEeecCCCCCCCCCCHHHHHHHHH-hhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 482 PCAFISVKTNSAGKTDDVNEADILSYCR-ENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 482 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
++++++..+... ..+.+++.+++. +.++.+++|..|.++++||+|.+||++|+.|++++.+-.
T Consensus 475 ~~~~v~~~~~~~----~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 475 SCAYVVLKAPHH----SLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred EEEEEEECCCCC----CCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 999998765321 456788888875 679999999999999999999999999999998887753
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.2e-67 Score=554.35 Aligned_cols=507 Identities=19% Similarity=0.262 Sum_probs=400.5
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCe----------eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHH
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGA----------RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEM 80 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~ 80 (567)
...+|+.+++.+.++++|+++|+++.+. ++||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 3 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 3 ASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 3457899999999999999999998654 899999999999999999999999999999999999999999
Q ss_pred HHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEccc--chHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccC
Q 038104 81 HFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQ--YVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRF 158 (567)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~ 158 (567)
++||+++|++++|++|.++.+++.++++.++++++|++.. ....+..... . ....++.++... ..
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~----~~~~~i~~~~~~-----~~ 149 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGK----P----SVRRLVTVGGRL-----LW 149 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCc----c----chhheecccccc-----cc
Confidence 9999999999999999999999999999999999998652 2111111000 0 112233332210 01
Q ss_pred CcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhh
Q 038104 159 GEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 238 (567)
....+.++...............++++++++|||||||.||+|.++|+++..........+++.++|+.+..+|++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 229 (552)
T PRK09274 150 GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFG 229 (552)
T ss_pred CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhh
Confidence 12234444322211111222345689999999999999999999999999888887777888999999999999987654
Q ss_pred HHHHHHHHhhCceeeeeC-------CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCH
Q 038104 239 WTFTWGVAARGGTNVCLR-------NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPA 311 (567)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~ 311 (567)
+ ..|+++++.. .+++..+++.|+++++|+++++|+++..|++........++++|.+++||+++++
T Consensus 230 ~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~ 302 (552)
T PRK09274 230 P-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPI 302 (552)
T ss_pred h-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCH
Confidence 3 3477766643 3578999999999999999999999999988765555678899999999999999
Q ss_pred HHHHHHHH-h--CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCC--------CCC
Q 038104 312 SLLEEIEL-L--GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLD--------TMS 380 (567)
Q Consensus 312 ~~~~~~~~-~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~--------~~~ 380 (567)
++.+.+.+ + ++++++.||+||+++++........ .............++|.|+++. .++|+|.+ ++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~-~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~~~~~ 380 (552)
T PRK09274 303 AVIERFRAMLPPDAEILTPYGATEALPISSIESREIL-FATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEWDDAL 380 (552)
T ss_pred HHHHHHHHHcCCCceEEccccccccceeEeecchhhh-ccccccccCCCCcccCccCCCc-eEEEEeccccccccccccc
Confidence 99999984 5 5799999999999876554321100 0000000011123689999998 89998853 345
Q ss_pred CcCCCCcceeEEEEecCccchhccCChhhhhhccc---CC--cccCCceEEEecCCcEEEEccCCceeeeCceeechHHH
Q 038104 381 SVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK---NG--WFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEL 455 (567)
Q Consensus 381 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 455 (567)
+++.| +.|||+++|+.++.||+++++.+...|. +| ||+|||+|+++++|++++.||.+|+|+++|.+|+|.+|
T Consensus 381 ~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eI 458 (552)
T PRK09274 381 RLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPC 458 (552)
T ss_pred cCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHH
Confidence 56666 8899999999999999999999887652 56 99999999999999999999999999999999999999
Q ss_pred HHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCC---ccccEEEEeCCCCCC--
Q 038104 456 ENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRF---MVPKKVVILPELPKT-- 530 (567)
Q Consensus 456 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~---~~p~~i~~v~~~P~t-- 530 (567)
|++|.++|+|.+++|++++++. ++.++++|++.++. ..+..++.+.+++.+..+ +.|..++++++||+|
T Consensus 459 E~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~-----~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~ 532 (552)
T PRK09274 459 ERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGV-----ACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIR 532 (552)
T ss_pred HHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCcc-----ccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCcccc
Confidence 9999999999999999998764 66788888887664 344555666666655444 577899999999999
Q ss_pred CCCccchHHHHHHHHhh
Q 038104 531 ATGKIQKFQLRALAKNF 547 (567)
Q Consensus 531 ~~GKv~r~~l~~~~~~~ 547 (567)
.+||++|++|++++.+.
T Consensus 533 ~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 533 HNAKIFREKLAVWAAKQ 549 (552)
T ss_pred ccccccHHHHHHHHHHh
Confidence 79999999999987764
No 44
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-66 Score=543.94 Aligned_cols=491 Identities=22% Similarity=0.281 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
+.++.++|.+.+. ++++++.+.++.+||+||.++++++|++|.++ |++++++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 4589999988874 79999999999999999999999999999997 89999999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCC
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGD 171 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
+|+++..+.+++.++++.+++++++++......+.... ....++.++. ..|.+.+....
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----------~~~~~~~~~~-----------~~~~~~l~~~~ 140 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----------PGVRVINVDS-----------PAWADELAAHR 140 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----------cCceEEEecc-----------ccHHHHhcccC
Confidence 99999999999999999999999999987766544321 1122222221 12444333222
Q ss_pred CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCc
Q 038104 172 PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGG 250 (567)
Q Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~ 250 (567)
..........++++++++|||||||.||+|+++|+++..+.......+++..+|+++..+|++|.+++.. ++.++..|+
T Consensus 141 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 220 (529)
T PRK07867 141 DAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGA 220 (529)
T ss_pred CCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCc
Confidence 2111222356689999999999999999999999999888888777888999999999999999999865 455677888
Q ss_pred eeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccc
Q 038104 251 TNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGL 330 (567)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~ 330 (567)
++++.+.+++..+++.++++++|++.++|+.+..++..........++++ +++||+.+++...+..+.+++++++.||+
T Consensus 221 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr-~~~gg~~~~~~~~~~~~~~g~~l~~~YG~ 299 (529)
T PRK07867 221 SIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR-IVYGNEGAPGDIARFARRFGCVVVDGFGS 299 (529)
T ss_pred eEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE-EEecCCCChHHHHHHHHHhCCcEEEeecc
Confidence 88888888999999999999999999999999998876543333334666 56688888877654444779999999999
Q ss_pred cccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC----------cceeEEEE-ecCcc
Q 038104 331 TEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG----------KTMGEIVL-RGSSI 399 (567)
Q Consensus 331 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~----------~~~Gel~v-~~~~~ 399 (567)
||++..+..+. . .....+|.|.++ +++++.+.+.+++.+. +..|||++ +|+++
T Consensus 300 TE~~~~~~~~~---~----------~~~~~~g~~~~~---~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~ 363 (529)
T PRK07867 300 TEGGVAITRTP---D----------TPPGALGPLPPG---VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGG 363 (529)
T ss_pred cccccccccCC---C----------CCCCCcCCCCCC---EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcc
Confidence 99985543221 0 112356777765 6777766666676662 12799999 99999
Q ss_pred chhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCC
Q 038104 400 MKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWG 479 (567)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (567)
+.||+++++.+.+.|.+|||+|||+|+++++|.+++.||.+|+++++|++|+|.+||++|.++|+|.+++|++++++..|
T Consensus 364 ~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g 443 (529)
T PRK07867 364 FEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVG 443 (529)
T ss_pred cccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhh--CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCREN--LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
++++++++..++. ..+.++++++++++ ++.|++|..++++++||+|++||++|+.|+++.....
T Consensus 444 ~~~~a~vv~~~~~-----~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~ 509 (529)
T PRK07867 444 DQVMAALVLAPGA-----KFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCA 509 (529)
T ss_pred eeEEEEEEECCCC-----CCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCC
Confidence 9999999987664 56889999999875 9999999999999999999999999999999886653
No 45
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3.2e-66 Score=544.18 Aligned_cols=502 Identities=24% Similarity=0.362 Sum_probs=414.8
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
|...|+.++++++++++|+++|+++.++++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHH-HHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhc
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQL-AREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQM 169 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 169 (567)
++++++..+.+++.++++.++++.++++...... ..+......... .....++....... ..........
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~ 170 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKL--PTLRNIIVAGQTRV-------EAELFLWLES 170 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhC--CcceEEEEecCCCC-------cchhhHHhhC
Confidence 9999999999999999999999999998654211 011111110000 02233333321100 0011111111
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH--HHHHHh
Q 038104 170 GDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF--TWGVAA 247 (567)
Q Consensus 170 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~--~~~~~~ 247 (567)
.... .+......+++++++|||||||.||+|.++|+++..+.......+.+..+|+++..+|++|.+++.. .+.++.
T Consensus 171 ~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~ 249 (527)
T TIGR02275 171 PAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFY 249 (527)
T ss_pred cCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHh
Confidence 1111 1122356689999999999999999999999999888877777788899999999999999999864 677888
Q ss_pred hCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeec
Q 038104 248 RGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTH 326 (567)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~ 326 (567)
.|+++++.+.+++..+++.++++++|++.++|.++..+++........+++++.+++||+++++++.+.+. .++.++++
T Consensus 250 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~ 329 (527)
T TIGR02275 250 AGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQ 329 (527)
T ss_pred cCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEe
Confidence 89999888888999999999999999999999999999887766667788999999999999999999998 57999999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKN 406 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 406 (567)
.||+||++....... .. .......+|.|+++...+++++. .+..++.+ +.|||+++|++++.||+++
T Consensus 330 ~YG~tE~~~~~~~~~---------~~-~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~v~g~~~~~gY~~~ 396 (527)
T TIGR02275 330 VFGMAEGLVNYTRLD---------DP-AEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLLTRGPYTFRGYYKA 396 (527)
T ss_pred eeccCccCccccCCC---------Cc-cccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEEecCCccchhhcCC
Confidence 999999653322111 00 01122467888864337888885 56677766 8899999999999999999
Q ss_pred hhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEE
Q 038104 407 EEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAF 485 (567)
Q Consensus 407 ~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~ 485 (567)
++.+...|. +|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..+++++++
T Consensus 397 ~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~ 476 (527)
T TIGR02275 397 PEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAF 476 (527)
T ss_pred hhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEE
Confidence 999988885 7999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 486 ISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 486 v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
|+..++ ..+..+|++++++. ++.|++|..++++++||+|.+||++|+.|+
T Consensus 477 vv~~~~------~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 477 IVVRDP------ALKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EEECCC------CCCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 987654 35678999999985 999999999999999999999999999874
No 46
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-66 Score=558.73 Aligned_cols=505 Identities=21% Similarity=0.256 Sum_probs=403.3
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
+|+.+.+.++ .+|+++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 86 ~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~G 163 (655)
T PRK03584 86 LNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLG 163 (655)
T ss_pred eeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 3555544332 589999999853 689999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccc---------hHHHHHHhhhhhccccCCCCCeEEEEeCCCC--CCCcc
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQY---------VQLAREALKLYFVEDRDAAGPRVILIDDIDS--PTGIR 157 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~ 157 (567)
++++++++.++.+++.++++.++++++|+++.. ...+.++...+. ....++.++.... .....
T Consensus 164 av~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~ 237 (655)
T PRK03584 164 AIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP------SLEHVVVVPYLGPAAAAAAL 237 (655)
T ss_pred cEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC------CccEEEEEecCCCccccccc
Confidence 999999999999999999999999999997653 223333332221 2345555543211 11112
Q ss_pred CCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHH-hhHhhhhccCCCCCEEEEecchHhh
Q 038104 158 FGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLS-TLSLILGWEMGSAPVYLWSLPMFHC 236 (567)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~-~~~~~~~~~~~~~d~~~~~~p~~~~ 236 (567)
.....|.++................+++++++|||||||.||||+++|++++.+ .......+++.++|+++...++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 238 PGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWM 317 (655)
T ss_pred CCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHH
Confidence 234567666552222222223356689999999999999999999999987644 4444556788999999999998887
Q ss_pred hhHHHHHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCC--cccccCCCceEEEEcCCCCC
Q 038104 237 NGWTFTWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKP--EERKEIASPVQILTGGAPPP 310 (567)
Q Consensus 237 ~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~l~~~~~~g~~l~ 310 (567)
.+ ..++.+++.|+++++.+. +++..+++.++++++|++.++|+++..+.+... .....++++|.+++||++++
T Consensus 318 ~~-~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~ 396 (655)
T PRK03584 318 MW-NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLP 396 (655)
T ss_pred hH-HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCC
Confidence 54 346678899999998753 478999999999999999999999999976532 23356789999999999999
Q ss_pred HHHHHHHH-Hh--CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCc
Q 038104 311 ASLLEEIE-LL--GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGK 387 (567)
Q Consensus 311 ~~~~~~~~-~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~ 387 (567)
+++.+.+. .+ ++.+.+.||+||+++.+.... . ........+|.|.++. .++|+|. ++.++ .+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~-----~-----~~~~~~g~~g~p~~g~-~~~ivd~-~g~~~-~g-- 461 (655)
T PRK03584 397 PEGFDWVYEHVKADVWLASISGGTDICSCFVGGN-----P-----LLPVYRGEIQCRGLGM-AVEAWDE-DGRPV-VG-- 461 (655)
T ss_pred HHHHHHHHHHhCCCceEEeccChHhhhcccccCC-----C-----CCCcCCCccCCCcCCc-eeEEECC-CCCCC-CC--
Confidence 99999988 44 578999999999865433211 0 0011235678899988 8999986 45555 44
Q ss_pred ceeEEEEecC--ccchhccCChhhhh--hc-c--cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHH
Q 038104 388 TMGEIVLRGS--SIMKGYLKNEEATS--QS-F--KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLF 460 (567)
Q Consensus 388 ~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~--~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 460 (567)
+.|||+++|| +++.||+++++.+. .. | .+|||+|||+|++|+||.+++.||+||+||++|++|+|.+||.+|.
T Consensus 462 ~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~ 541 (655)
T PRK03584 462 EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVE 541 (655)
T ss_pred CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHH
Confidence 7899999996 78999999987543 11 2 2578999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCC---HHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccch
Q 038104 461 RHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVN---EADILSYCRENLSRFMVPKKVVILPELPKTATGKIQK 537 (567)
Q Consensus 461 ~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r 537 (567)
++|+|.+++|++++++..|++++++|++.++. ..+ .++|+++++++|+.|++|..|+++++||+|++||++|
T Consensus 542 ~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~-----~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r 616 (655)
T PRK03584 542 ALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGV-----TLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVE 616 (655)
T ss_pred hCCCcceEEEEeeEcCCCCEEEEEEEEECCCC-----CCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchH
Confidence 99999999999999998899999999988654 223 3689999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 038104 538 FQLRALAKNF 547 (567)
Q Consensus 538 ~~l~~~~~~~ 547 (567)
+.|++.+...
T Consensus 617 ~~lr~~~~~~ 626 (655)
T PRK03584 617 LPVKKLLHGR 626 (655)
T ss_pred HHHHHHHcCC
Confidence 9999988754
No 47
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-66 Score=544.43 Aligned_cols=511 Identities=25% Similarity=0.372 Sum_probs=432.7
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
..+|+.+.+.+.++.+|+++|+.+.+..+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCC
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGD 171 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
+|+++..+.+++.++++.+++++++++......+.......+ ....++..++.. ......+.++.....
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 163 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP------LLSTVVVAGGSS-----DDSVLGYEDLLAEAG 163 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC------ccceEEEecCCC-----cccccCHHHHhhccC
Confidence 999999999999999999999999999877665543322111 334455444321 112355666654433
Q ss_pred CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccC-CCCCEEEEecchHhhhhHHHHHHHHhhCc
Q 038104 172 PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEM-GSAPVYLWSLPMFHCNGWTFTWGVAARGG 250 (567)
Q Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~-~~~d~~~~~~p~~~~~g~~~~~~~~~~g~ 250 (567)
... +......+++++++|||||||.||+|.++|+++...+......+++ ..+++++...|++|.+|+..++.++..|+
T Consensus 164 ~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~ 242 (542)
T PRK07786 164 PAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGA 242 (542)
T ss_pred CCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccC
Confidence 322 1223455789999999999999999999999998887776666666 57889999999999999988888999999
Q ss_pred eeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-Hh-CCeeec
Q 038104 251 TNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LL-GFHVTH 326 (567)
Q Consensus 251 ~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~-~~~i~~ 326 (567)
++++.+ .+++..+++.++++++|.+.++|+++..++......... .+++.+++||+++++++.+.+. .+ +.++++
T Consensus 243 ~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~ 321 (542)
T PRK07786 243 PTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILA 321 (542)
T ss_pred EEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEe
Confidence 998865 568999999999999999999999999998765433333 3689999999999999999988 45 789999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKN 406 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 406 (567)
.||+||++++.+.+..+ ........+|.|+++. .+++.|. ++.+++.+ +.|||+++|+.++.||+++
T Consensus 322 ~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gy~~~ 388 (542)
T PRK07786 322 AFGQTEMSPVTCMLLGE---------DAIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRAPTLMSGYWNN 388 (542)
T ss_pred eecccccccceEecCcc---------cccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEEChhhhhhhcCC
Confidence 99999998765543211 1112235689999987 8999985 56777766 7899999999999999999
Q ss_pred hhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEE
Q 038104 407 EEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFI 486 (567)
Q Consensus 407 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 486 (567)
++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+++|.+||++|.++|+|.+++|++.+++..|+.+++++
T Consensus 389 ~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 468 (542)
T PRK07786 389 PEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVA 468 (542)
T ss_pred HHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888788888888
Q ss_pred EeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcccc
Q 038104 487 SVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVSKD 552 (567)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~~~ 552 (567)
+...+.. ....+++.++++++++.|.+|..++++++||+|++||++|++|++++.+..+-+.
T Consensus 469 ~~~~~~~----~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~~ 530 (542)
T PRK07786 469 AVRNDDA----ALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNVER 530 (542)
T ss_pred EECCCCC----CCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhchhh
Confidence 8765431 3567899999999999999999999999999999999999999999998755443
No 48
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-66 Score=539.22 Aligned_cols=492 Identities=28% Similarity=0.457 Sum_probs=419.0
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
+++.++++++++.+|+++|+++.+..+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++..+.+++.++++.++++.++++.+...... .....+.++.... ..+..+.. ....
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-------------~~~~~~~~~~~~~--------~~~~~~~~-~~~~ 139 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-------------LETPKIVIDAAAQ--------ADSRRLAQ-GGLE 139 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhh-------------cccceEEecCccc--------chhHHHhc-cCCC
Confidence 999999999999999999999999876543211 0112222222110 01111111 1111
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCcee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTN 252 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~ 252 (567)
........++++++++|||||||.||+|.++|+++...+......+++..+++++...|++|.+++.. .+..+..|+++
T Consensus 140 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~ 219 (497)
T PRK06145 140 IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTL 219 (497)
T ss_pred CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEE
Confidence 11122356689999999999999999999999999876666666778899999999999999998865 46677889999
Q ss_pred eeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-Hh-CCeeeccccc
Q 038104 253 VCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LL-GFHVTHAYGL 330 (567)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~-~~~i~~~yG~ 330 (567)
++.+.+++..+++.++++++|.+.++|+++..++.........+++++.+++||+++++.+.+.+. .+ +.++++.||+
T Consensus 220 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~ 299 (497)
T PRK06145 220 RIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGL 299 (497)
T ss_pred EECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecC
Confidence 998889999999999999999999999999999887665566778999999999999999999988 44 6889999999
Q ss_pred cccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhh
Q 038104 331 TEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEAT 410 (567)
Q Consensus 331 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 410 (567)
||+++.++...... .......+|.|+++. .+++.+. ++..++.+ +.|||+++|++++.||+++++.+
T Consensus 300 tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~Gy~~~~~~~ 366 (497)
T PRK06145 300 TETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTKGYWKDPEKT 366 (497)
T ss_pred cccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhhhhcCChHHH
Confidence 99987655422110 111224689999987 8999986 56667766 78999999999999999999999
Q ss_pred hhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeec
Q 038104 411 SQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKT 490 (567)
Q Consensus 411 ~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~ 490 (567)
.+.|.++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||+.|.++|+|.+++|++.+++..|++++++++..+
T Consensus 367 ~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 446 (497)
T PRK06145 367 AEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNP 446 (497)
T ss_pred HHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999988765
Q ss_pred CCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 491 NSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 491 ~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
.. ..+..+|+++++++++.|++|..++++++||+|++||++|++|++++.
T Consensus 447 ~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 447 GA-----TLTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred CC-----CCCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 43 456889999999999999999999999999999999999999998764
No 49
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-66 Score=547.80 Aligned_cols=524 Identities=28% Similarity=0.411 Sum_probs=427.9
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCC---eeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHh
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEG---ARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAV 84 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (567)
+++.++|+.++|++.+..+|+++|+++.+ +.+||+||.++++++|.+|.+ .|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 56778999999999999999999998753 799999999999999999986 89999999999999999999999999
Q ss_pred hhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCC-----CCccCC
Q 038104 85 PMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSP-----TGIRFG 159 (567)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~-----~~~~~~ 159 (567)
+++|+++++++|..+.+++.++++.++++++|++....+.+.+...... ....++.++..... ......
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~ 158 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP------CVRAVVFIGPSDADSAAAHMPEGIK 158 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc------cccEEEEecCcccccchhccccccc
Confidence 9999999999999999999999999999999999887777766655432 33445544422111 011123
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHh--hhhccCCCCCEEEEecchHhhh
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSL--ILGWEMGSAPVYLWSLPMFHCN 237 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~--~~~~~~~~~d~~~~~~p~~~~~ 237 (567)
...|.++........ +.....++++++++|||||||.||+|.++|+++....... ...+++..++++++.+|++|.+
T Consensus 159 ~~~~~~l~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 237 (576)
T PRK05620 159 VYSYEALLDGRSTVY-DWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVL 237 (576)
T ss_pred cccHHHHhhcCCCcC-CCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhh
Confidence 456777776433222 1223556899999999999999999999999986554432 3346788999999999999999
Q ss_pred hHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHH
Q 038104 238 GWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 238 g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~ 316 (567)
++...+.++..|+++++.. .+++..+++.|++++++.+.++|+++..++...........+++.+++||+.+++++.+.
T Consensus 238 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 317 (576)
T PRK05620 238 SWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKA 317 (576)
T ss_pred hhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHH
Confidence 9988888888999988765 568999999999999999999999999887654333334458999999999999999999
Q ss_pred HH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEe
Q 038104 317 IE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLR 395 (567)
Q Consensus 317 ~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~ 395 (567)
+. .+++++++.||+||++..+........ .............|.+.++. .+++++. +..++..+++.|||+++
T Consensus 318 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v~ 391 (576)
T PRK05620 318 WEERYGVDVVHVWGMTETSPVGTVARPPSG---VSGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQVR 391 (576)
T ss_pred HHHHhCCceeeeccccccccceeeeccCCc---cccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEEE
Confidence 88 568999999999999877654331110 00011111224678887776 7888874 55554433367999999
Q ss_pred cCccchhccCChhhh----h------------hcc-cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHH
Q 038104 396 GSSIMKGYLKNEEAT----S------------QSF-KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENV 458 (567)
Q Consensus 396 ~~~~~~gy~~~~~~~----~------------~~~-~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 458 (567)
|++++.||+++++.+ . +.+ .+|||+|||++++++||.+++.||.+|+|+.+|.+|+|.+||.+
T Consensus 392 g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~ 471 (576)
T PRK05620 392 GNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENY 471 (576)
T ss_pred cCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHH
Confidence 999999999999877 2 223 36899999999999999999999999999999999999999999
Q ss_pred HHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchH
Q 038104 459 LFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKF 538 (567)
Q Consensus 459 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~ 538 (567)
|.++|.|.+++|++.+++..|+.+++++++.++... .....++|+++++++|+.|++|+.|+++++||+|.+||++|+
T Consensus 472 l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~--~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~ 549 (576)
T PRK05620 472 IMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEP--TRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKK 549 (576)
T ss_pred HhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCc--ccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHH
Confidence 999999999999999999889999999988766421 134578999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 038104 539 QLRALAKNF 547 (567)
Q Consensus 539 ~l~~~~~~~ 547 (567)
.|++++++.
T Consensus 550 ~L~~~~~~~ 558 (576)
T PRK05620 550 DLRQHLADG 558 (576)
T ss_pred HHHHHHhcC
Confidence 999998864
No 50
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=8e-66 Score=545.92 Aligned_cols=522 Identities=27% Similarity=0.471 Sum_probs=430.7
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEe--CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIY--EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
+.+.++.|+.++|.+.++.+|+++|+++ .+.++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 89 (559)
T PRK08315 10 DVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATA 89 (559)
T ss_pred cCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 3455778999999999999999999988 45789999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCChHHHHHHHHhcCceEEEEcccch-----HHHHHHhhhhhcc-------ccCCCCCeEEEEeCCCCC
Q 038104 86 MAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYV-----QLAREALKLYFVE-------DRDAAGPRVILIDDIDSP 153 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~~ii~~~~~~~~ 153 (567)
++|++++|++|..+.+++..+++.++++.++++.... ..+.+........ ........++..+...
T Consensus 90 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (559)
T PRK08315 90 KIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK-- 167 (559)
T ss_pred HhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC--
Confidence 9999999999999999999999999999999987542 2222221111000 0000122333333211
Q ss_pred CCccCCcccHHHHHhcCCCC-----CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEE
Q 038104 154 TGIRFGEFEYEQFVQMGDPR-----FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYL 228 (567)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~ 228 (567)
..+...|.++....... .........+++++++|||||||.||+|.++|+++..++......+++.++|+++
T Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~ 244 (559)
T PRK08315 168 ---HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLC 244 (559)
T ss_pred ---CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEE
Confidence 11224455554322110 1111234567899999999999999999999999998888888888999999999
Q ss_pred EecchHhhhhHHH-HHHHHhhCceeeee-CCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcC
Q 038104 229 WSLPMFHCNGWTF-TWGVAARGGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGG 306 (567)
Q Consensus 229 ~~~p~~~~~g~~~-~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g 306 (567)
..+|++|..|+.. ++.++..|+++++. ..+++..+++.++++++|.+.++|+++..++.........++++|.+++||
T Consensus 245 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G 324 (559)
T PRK08315 245 IPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAG 324 (559)
T ss_pred EecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecC
Confidence 9999999999865 66777888888744 467999999999999999999999999988876655556788999999999
Q ss_pred CCCCHHHHHHHH-HhCC-eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCC
Q 038104 307 APPPASLLEEIE-LLGF-HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPR 384 (567)
Q Consensus 307 ~~l~~~~~~~~~-~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~ 384 (567)
+++++++.+.+. .++. ++++.||+||++.+++.+.... ........+|.|+++. .++++|.+++..++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~--------~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~ 395 (559)
T PRK08315 325 SPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDD--------PLEKRVTTVGRALPHL-EVKIVDPETGETVPR 395 (559)
T ss_pred CCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCccc--------chhhccCCCCccCCCc-EEEEEcCccCCcCCC
Confidence 999999999987 5554 5999999999987665443211 1112235789999998 899999876888887
Q ss_pred CCcceeEEEEecCccchhccCChhhhhhcc-cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC
Q 038104 385 DGKTMGEIVLRGSSIMKGYLKNEEATSQSF-KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP 463 (567)
Q Consensus 385 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 463 (567)
+ +.|||+++|+.++.||++++..+...| .++||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||++|.+++
T Consensus 396 g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~ 473 (559)
T PRK08315 396 G--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHP 473 (559)
T ss_pred C--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCC
Confidence 7 889999999999999999999998888 5889999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 464 RVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 464 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+|.+++|++++++..++.++++|+...+. ..+.+++++++++.++.|++|..++++++||+|.+||++|.+|+++
T Consensus 474 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~ 548 (559)
T PRK08315 474 KIQDVQVVGVPDEKYGEEVCAWIILRPGA-----TLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREM 548 (559)
T ss_pred CceEEEEEecCCCCCCeEEEEEEEeCCCC-----CCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHH
Confidence 99999999999888788888888876554 4678899999999999999999999999999999999999999999
Q ss_pred HHhhhcc
Q 038104 544 AKNFAVS 550 (567)
Q Consensus 544 ~~~~~~~ 550 (567)
+.+....
T Consensus 549 ~~~~~~~ 555 (559)
T PRK08315 549 MIEELGL 555 (559)
T ss_pred HHhhhch
Confidence 8775443
No 51
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-66 Score=546.07 Aligned_cols=508 Identities=22% Similarity=0.318 Sum_probs=407.3
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
.-|+.++|+++++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 15 ~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (534)
T PRK05852 15 GPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLV 94 (534)
T ss_pred cccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcE
Confidence 3469999999999999999998754 57999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
++++++.++.+++.++++.++++++|++............. .....+.+...... ..+...........
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 163 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTR--------WWPLTVNVGGDSGP---SGGTLSVHLDAATE 163 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccccc--------ccceeeeecccccc---cccccccccccccC
Confidence 99999999999999999999999999986533221110000 01111111111000 00000000000000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhC
Q 038104 171 DPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARG 249 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g 249 (567)
............++.++++|||||||.||+|.++|+++..........+++..+|++++..|++|.+++.. ++.++..|
T Consensus 164 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g 243 (534)
T PRK05852 164 PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASG 243 (534)
T ss_pred CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcC
Confidence 00000111122467899999999999999999999999888888777888999999999999999999875 56666777
Q ss_pred ceeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcc--cccCCCceEEEEcCCCCCHHHHHHHH-HhCCee
Q 038104 250 GTNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE--RKEIASPVQILTGGAPPPASLLEEIE-LLGFHV 324 (567)
Q Consensus 250 ~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i 324 (567)
+++++.. .+++..+++.|+++++|+++++|+++..|.+..... ...++++|.+.++|+++++++++.+. .++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v 323 (534)
T PRK05852 244 GAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAAPV 323 (534)
T ss_pred CeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCCCh
Confidence 7766643 468889999999999999999999999998765332 34567999999999999999999988 679999
Q ss_pred eccccccccCCCccccccccccCCCCCchhhhhccccCce--eeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchh
Q 038104 325 THAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGIS--ILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKG 402 (567)
Q Consensus 325 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 402 (567)
++.||+||++..++......... .......+|.+ .++. .+++.|. .+.+++.+ +.|||+++|+.++.|
T Consensus 324 ~~~YG~tE~~~~~~~~~~~~~~~------~~~~~~~~g~~g~~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~~v~~g 393 (534)
T PRK05852 324 VCAFGMTEATHQVTTTQIEGIGQ------TENPVVSTGLVGRSTGA-QIRIVGS-DGLPLPAG--AVGEVWLRGTTVVRG 393 (534)
T ss_pred hhccCccccchhhhcCCcccccc------ccCcccccccCCCCCCC-eEEEECC-CCCCCCCC--CceEEEEecCcccch
Confidence 99999999987665432110000 00001123333 4666 7888886 45677776 889999999999999
Q ss_pred ccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCce
Q 038104 403 YLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESP 482 (567)
Q Consensus 403 y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~ 482 (567)
|+++++.+.+.|.+|||+|||+|++|+||++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++++++..|+.+
T Consensus 394 Y~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~ 473 (534)
T PRK05852 394 YLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAV 473 (534)
T ss_pred hcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred eEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 483 CAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 483 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+++|+..++. ..+.+++.++++++++.|++|..|+++++||+|.+||++|++|++++..
T Consensus 474 ~~~vv~~~~~-----~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 474 AAVIVPRESA-----PPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred EEEEEECCCC-----CCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 9998876543 4678899999999999999999999999999999999999999998753
No 52
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5e-66 Score=544.76 Aligned_cols=504 Identities=26% Similarity=0.386 Sum_probs=419.8
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYE--GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..|+.+++.+.++++|+++|+.+. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 478999999999999999999974 579999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
++|+++..+.+++.++++.+++++++++......+... . ..++.++... ......|.++....
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~-----------~-~~~i~~~~~~-----~~~~~~~~~~~~~~ 169 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL-----------G-LPVIVLGEEK-----IEGAVNWKELLEAA 169 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc-----------C-CcEEEecCCC-----CCCcccHHHHHhhc
Confidence 99999999999999999999999999998876655432 1 2233333221 11234566665443
Q ss_pred CCCC--CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc--CCCCCEEEEecchHhhhhHHH-HHHH
Q 038104 171 DPRF--LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE--MGSAPVYLWSLPMFHCNGWTF-TWGV 245 (567)
Q Consensus 171 ~~~~--~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~~~-~~~~ 245 (567)
.... ........+++++++|||||||.||+|.++|+++..+........+ ....++.+..+|++|.+++.. .+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 249 (546)
T PLN02330 170 DRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCAT 249 (546)
T ss_pred cccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHH
Confidence 2211 1122345678999999999999999999999998765543322221 223467888999999998764 5677
Q ss_pred HhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCC--CceEEEEcCCCCCHHHHHHHH-Hh-C
Q 038104 246 AARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIA--SPVQILTGGAPPPASLLEEIE-LL-G 321 (567)
Q Consensus 246 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~--~l~~~~~~g~~l~~~~~~~~~-~~-~ 321 (567)
+..|+++++.+.+++..+++.++++++|.+.++|+++..++.........+. .++.+++||+++++++++++. .+ +
T Consensus 250 l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~ 329 (546)
T PLN02330 250 LRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPG 329 (546)
T ss_pred hhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCC
Confidence 7889999999999999999999999999999999999999876443333343 478899999999999999998 55 8
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK 401 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 401 (567)
+++++.||+||++.+...+.... ..........+|.|+++. +++++|.+++.+++.| +.|||+++|+.++.
T Consensus 330 ~~~~~~YG~tE~~~~~~~~~~~~------~~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v~g~~~~~ 400 (546)
T PLN02330 330 VQVQEAYGLTEHSCITLTHGDPE------KGHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCVRSQCVMQ 400 (546)
T ss_pred CeEEecccccccccceecCCCcc------ccccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEEecchhhh
Confidence 99999999999986554321110 000112235689999988 8999997788888887 78999999999999
Q ss_pred hccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 402 GYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 402 gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
||+++++.+.+.+. +|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.+|.+++.|.+++|++++++..|+
T Consensus 401 gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (546)
T PLN02330 401 GYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGE 480 (546)
T ss_pred hhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCc
Confidence 99999998888774 79999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
.++++|+..++. ..+.+++++++++.++.|+.|+.++++++||+|++||++|++|++++...
T Consensus 481 ~~~a~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 481 IPAACVVINPKA-----KESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred eeEEEEEECCCC-----CCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 999999887554 45678899999999999999999999999999999999999999998765
No 53
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7e-66 Score=541.44 Aligned_cols=500 Identities=24% Similarity=0.319 Sum_probs=424.3
Q ss_pred CHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeec
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTI 94 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (567)
++.++|++.++++|+++|+.+.++++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCC
Q 038104 95 NVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRF 174 (567)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++..+.+++..+++.+++++++++......+........ ....++.+++.............|.++.......
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH------DLRTLILVGEPAHASEGGGESPSWPKLLALGDAD- 153 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc------ccceEEEecCcccccCCccccccHHHhhcccccc-
Confidence 999999999999999999999998877666555433221 3344555554332222223344566655433221
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeee
Q 038104 175 LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVC 254 (567)
Q Consensus 175 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~ 254 (567)
+......+++++++|||||||.||+|.++|+++...+......+++..+|+++..+|++|.+++..++.++..|+++++
T Consensus 154 -~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~ 232 (515)
T TIGR03098 154 -PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVL 232 (515)
T ss_pred -ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEE
Confidence 1222445789999999999999999999999998888777777788999999999999999999888899999999999
Q ss_pred eCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeeccccccc
Q 038104 255 LRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTHAYGLTE 332 (567)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~~yG~tE 332 (567)
.+..++..+++.++++++|++.++|+++..|.+... ....++++|.++++|+++++++.+.++. + ++.+++.||+||
T Consensus 233 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE 311 (515)
T TIGR03098 233 HDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTE 311 (515)
T ss_pred cCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecccc
Confidence 988999999999999999999999999999976532 2245678999999999999999999984 5 788999999999
Q ss_pred cCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhh
Q 038104 333 ATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQ 412 (567)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (567)
++....... .........+|.|+++. .+++.+. ++..++.+ +.|||+++|+.++.||+++++.+.+
T Consensus 312 ~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy~~~~~~~~~ 377 (515)
T TIGR03098 312 AFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGYWNDPEKTAE 377 (515)
T ss_pred ccceEeccc----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccccCCchhhhh
Confidence 975443211 11112235789999998 8999985 56666665 7899999999999999999988876
Q ss_pred ccc------------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 413 SFK------------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 413 ~~~------------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
.|. ++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||+++.++|.|.+++|++++++..|+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~ 457 (515)
T TIGR03098 378 RFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQ 457 (515)
T ss_pred hhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCc
Confidence 653 24899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
+++++++...+. ..+.++++++++++++.+++|..++++++||+|.+||++|++|++
T Consensus 458 ~~~~~~~~~~~~-----~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 458 AIVLVVTPPGGE-----ELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eEEEEEEeCCCC-----CCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 999988765443 567889999999999999999999999999999999999999964
No 54
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=9.5e-66 Score=541.96 Aligned_cols=499 Identities=28% Similarity=0.404 Sum_probs=416.5
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEe------CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIY------EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
-|.+.|+.+++.+.++.+|+++|++. .+..+||+||+++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 18 LWRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred ccccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 34567999999999999999999986 236899999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchH-----HHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccC
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQ-----LAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRF 158 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~ 158 (567)
|+++|++++|++|..+.+++.++++.+++++++++..... ...+...... ....++..+...
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~------- 164 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP------ALRQVVVIDGDG------- 164 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC------cceEEEEecCCC-------
Confidence 9999999999999999999999999999999999876431 1222111111 223444443211
Q ss_pred CcccHHHHHhcCCCCC-------CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEec
Q 038104 159 GEFEYEQFVQMGDPRF-------LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSL 231 (567)
Q Consensus 159 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 231 (567)
...|..++....... ........+++++++|||||||.||+|.++|+++...+......++++.+|+++..+
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~ 243 (538)
T TIGR03208 165 -DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMAS 243 (538)
T ss_pred -CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeC
Confidence 122333322111000 011224568999999999999999999999999988888877778889999999999
Q ss_pred chHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCC
Q 038104 232 PMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPP 310 (567)
Q Consensus 232 p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~ 310 (567)
|++|..|+.. ++.+++.|+++++.+.+++..+++.+++++++++.++|.++..++.........+++++.+++||++++
T Consensus 244 pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~ 323 (538)
T TIGR03208 244 PMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIP 323 (538)
T ss_pred CchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCC
Confidence 9999988754 777888999998888889999999999999999999999999988765444556789999999999999
Q ss_pred HHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcce
Q 038104 311 ASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTM 389 (567)
Q Consensus 311 ~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~ 389 (567)
+++.+.+. .+++++++.||+||++++.+.+... ........+|.|.++. .+++++. ++.+++.+ +.
T Consensus 324 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~g~-~v~i~~~-~~~~~~~g--~~ 390 (538)
T TIGR03208 324 GILVERAWELLGALIVSAWGMTENGAVTVTEPDD---------ALEKASTTDGRPLPGV-EVKVIDA-NGAKLSQG--ET 390 (538)
T ss_pred HHHHHHHHHHcCCeEEeeeccCcCCCccccCccc---------chhhccCcccccCCCC-EEEEECC-CCCCCcCC--CC
Confidence 99999987 5789999999999998766543211 0111234679999987 8999986 56677766 78
Q ss_pred eEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEE
Q 038104 390 GEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAA 469 (567)
Q Consensus 390 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 469 (567)
|||+++|++++.||+++++.+.. ..+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.+|.++|+|.+++
T Consensus 391 Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~ 469 (538)
T TIGR03208 391 GRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVA 469 (538)
T ss_pred cEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEE
Confidence 99999999999999999887653 35789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHh-hCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 470 VVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRE-NLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 470 v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
|++.+++..|+.+.++|+...+. ..+.+++.+++++ +++.|++|+.++++++||+|++||++|++|+
T Consensus 470 v~~~~~~~~g~~~~a~v~~~~~~-----~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 470 IVAYPDERLGERACAVVVPKPGC-----TLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred EEeccCCCCCceEEEEEEECCCC-----CCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 99999988889999999887654 5677889999985 7999999999999999999999999999986
No 55
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-65 Score=539.27 Aligned_cols=508 Identities=26% Similarity=0.357 Sum_probs=428.5
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
.++.|+.++|.++++++|+++|+++.+..+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEccc-chHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhc
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQ-YVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQM 169 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 169 (567)
+++++|..+.+++.++++.++++.++++.. ......+...... ....++.+...... ....+....
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~~~~ 155 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP------SLKHVLTLGPVPDG-------VDLLAAAAK 155 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC------CceEEEEeCCccch-------hhHHHhhhc
Confidence 999999999999999999999999999876 4343333322111 22344444332110 001111111
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhC
Q 038104 170 GDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARG 249 (567)
Q Consensus 170 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g 249 (567)
..... ......++++++++|||||||.||+|.++|.++..........+++..+|+++..+|++|.+++. ++.+++.|
T Consensus 156 ~~~~~-~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G 233 (524)
T PRK06188 156 FGPAP-LVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRG 233 (524)
T ss_pred cCccc-ccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcC
Confidence 11111 11113345699999999999999999999999998888888888899999999999999998874 56778899
Q ss_pred ceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccc
Q 038104 250 GTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAY 328 (567)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~y 328 (567)
+++++.+..++..+++.++++++|++.++|+++..+++........++++|.+++||++++++..+.+. .++..+++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~Y 313 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYY 313 (524)
T ss_pred CEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhhee
Confidence 999999999999999999999999999999999999988766666788999999999999999887776 6788899999
Q ss_pred cccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh
Q 038104 329 GLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE 408 (567)
Q Consensus 329 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 408 (567)
|+||++..+..+..... ..........+|.|+++. .+++++. ++.+++.+ +.|||+++|+.++.||++++.
T Consensus 314 G~tE~~~~~~~~~~~~~-----~~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 384 (524)
T PRK06188 314 GQTEAPMVITYLRKRDH-----DPDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLVMDGYWNRPE 384 (524)
T ss_pred CccccCCceeecCchhc-----cccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcchhhhhcCChH
Confidence 99999766655432111 001112334679999998 8999986 46777776 789999999999999999999
Q ss_pred hhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEe
Q 038104 409 ATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISV 488 (567)
Q Consensus 409 ~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~ 488 (567)
.+...+.+|||+|||+|+++++|.+++.||.+|+++++|.+++|.+||.+|.++++|.+++|++.+++..++.++++++.
T Consensus 385 ~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 464 (524)
T PRK06188 385 ETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVL 464 (524)
T ss_pred HhhhhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888899999988
Q ss_pred ecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 489 KTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
.+.. ....+++++++++.++.|++|..|+++++||+|++||++|++|++++.+.
T Consensus 465 ~~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~ 518 (524)
T PRK06188 465 RPGA-----AVDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEG 518 (524)
T ss_pred CCCC-----CCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhh
Confidence 7554 45678999999999999999999999999999999999999999998654
No 56
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=5.3e-66 Score=553.89 Aligned_cols=510 Identities=19% Similarity=0.233 Sum_probs=399.6
Q ss_pred CCCHHH-HHHHHHHHcCCceEEEeCC--------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 13 PLSPLT-FLKRAAAVYGNRTSIIYEG--------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 13 ~~tl~~-~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
.+|+.+ +|++++.++|+++|+++.+ +++||+||.++++++|++|+++|+++||+|+++++|+++++++++|
T Consensus 173 ~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA 252 (728)
T PLN03052 173 VLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLA 252 (728)
T ss_pred EeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 366655 6666666789999999854 3799999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccch------HHHHHHhhhhhccccCCCCCeEEEEeCCCCC--CC
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYV------QLAREALKLYFVEDRDAAGPRVILIDDIDSP--TG 155 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--~~ 155 (567)
|+++|++++|++|.++.+++.+++++++++++|+++... +....+.... . ..++++...... ..
T Consensus 253 ~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~-------~-~~~iv~~~~~~~~~~~ 324 (728)
T PLN03052 253 IILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK-------A-PKAIVLPADGKSVRVK 324 (728)
T ss_pred HHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc-------C-CcEEEEeCCCCccccc
Confidence 999999999999999999999999999999999986542 1122221111 1 223333321110 00
Q ss_pred ccCCcccHHHHHhcCCCC----CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEec
Q 038104 156 IRFGEFEYEQFVQMGDPR----FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSL 231 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 231 (567)
.......|.+++...... ..+......+++++|+|||||||.||||+++|.+++.........++++++|+++...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~ 404 (728)
T PLN03052 325 LREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPT 404 (728)
T ss_pred cccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECC
Confidence 011245677765432111 1111113458999999999999999999999999877666655567889999999999
Q ss_pred chHhhhhHHHHHHHHhhCceeeeeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCC
Q 038104 232 PMFHCNGWTFTWGVAARGGTNVCLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPP 310 (567)
Q Consensus 232 p~~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~ 310 (567)
|+.|+.+...++.+++.|+++++.+. +.+..+++.++++++|++.++|+++..|.+.......+++++|.++++|++++
T Consensus 405 ~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~ 484 (728)
T PLN03052 405 NLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASS 484 (728)
T ss_pred CcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCC
Confidence 99999998777789999999999874 45678999999999999999999999998765445567899999999999999
Q ss_pred HHHHHHHHH-hC-CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcc
Q 038104 311 ASLLEEIEL-LG-FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKT 388 (567)
Q Consensus 311 ~~~~~~~~~-~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~ 388 (567)
++...++.. ++ .++.+.||+||+++.++.... .. ......+|.|.++. .++|+|. ++++++.|..+
T Consensus 485 ~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~------~~----~~~~g~~g~p~~g~-~v~v~d~-~g~~v~~g~~~ 552 (728)
T PLN03052 485 VDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSL------LQ----PQAFAAFSTPAMGC-KLFILDD-SGNPYPDDAPC 552 (728)
T ss_pred HHHHHHHHHhcCCCCeEeeccChhhCcccccCCC------CC----CCCCCccccCCCCc-eEEEECC-CCCCCCCCCCc
Confidence 998877663 34 579999999999865543210 00 01234679999998 8999985 67778776434
Q ss_pred eeEEEEecCcc--chhccCChhhhhhccc-----CC--cccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 389 MGEIVLRGSSI--MKGYLKNEEATSQSFK-----NG--WFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 389 ~Gel~v~~~~~--~~gy~~~~~~~~~~~~-----~~--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
.|||+++++.. ..+|+++.. ....|. .+ ||+|||+++++++|.++++||+||+|+++|++|+|.|||++|
T Consensus 553 ~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l 631 (728)
T PLN03052 553 TGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVC 631 (728)
T ss_pred eEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHH
Confidence 79999986532 345666542 222231 23 899999999999999999999999999999999999999999
Q ss_pred H-cCCCceEEEEEeecCCCCC-CceeEEEEee--cCCCCCCCCCCHHHHH----HHHHhhCCCCccccEEEEeCCCCCCC
Q 038104 460 F-RHPRVLEAAVVAMPHPQWG-ESPCAFISVK--TNSAGKTDDVNEADIL----SYCRENLSRFMVPKKVVILPELPKTA 531 (567)
Q Consensus 460 ~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~--~~~~~~~~~~~~~~l~----~~~~~~l~~~~~p~~i~~v~~~P~t~ 531 (567)
. .+|.|.|++|++++++..| ++++++|++. ++. ..+.++|+ ++++++++++..|..|+++++||+|.
T Consensus 632 ~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~-----~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~ 706 (728)
T PLN03052 632 NAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGS-----NPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTA 706 (728)
T ss_pred HhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCC-----CCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCC
Confidence 5 7899999999999998776 8899999987 333 23444444 45677888899999999999999999
Q ss_pred CCccchHHHHHHHHhhh
Q 038104 532 TGKIQKFQLRALAKNFA 548 (567)
Q Consensus 532 ~GKv~r~~l~~~~~~~~ 548 (567)
+||++|+.|++++.+..
T Consensus 707 sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 707 SNKVMRRVLRQQLAQEL 723 (728)
T ss_pred chHHHHHHHHHHHHhhh
Confidence 99999999999887654
No 57
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-66 Score=556.28 Aligned_cols=515 Identities=21% Similarity=0.264 Sum_probs=407.8
Q ss_pred cccccccccCCCCCHHHHHHHHHHHcCCceEEEeCC---------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC
Q 038104 2 DKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEG---------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAP 72 (567)
Q Consensus 2 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~ 72 (567)
++.+++..+ ...|+.++|+++++.+|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++
T Consensus 10 ~~~~~~~~~-~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~ 87 (631)
T PRK07769 10 DVNGKIRFP-PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAP 87 (631)
T ss_pred ccccccccc-ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcC
Confidence 334444322 44699999999999999999998732 5799999999999999999987 899999999999
Q ss_pred ChHHHHHHHHHhhhccceeeec-cCCCC--hHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeC
Q 038104 73 NIPAMYEMHFAVPMAEAVLNTI-NVRLD--AKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDD 149 (567)
Q Consensus 73 ~~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 149 (567)
|++++++++|||+++|++++|+ ++..+ .+++.++++.++++++|++.+..+.+.+.....+.. ....++.++.
T Consensus 88 n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (631)
T PRK07769 88 QNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAK----ERPRVIAVDA 163 (631)
T ss_pred CChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhcccc----ccceEEEccc
Confidence 9999999999999999999999 45553 688999999999999999987766555443322100 1123333322
Q ss_pred CCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEE
Q 038104 150 IDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLW 229 (567)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 229 (567)
.... . .... ......++++++++|||||||.||+|.++|+++...+......+++.++|+++.
T Consensus 164 ~~~~-------------~---~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 226 (631)
T PRK07769 164 VPDE-------------V---GATW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVS 226 (631)
T ss_pred cccc-------------c---cccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEE
Confidence 1000 0 0000 111245689999999999999999999999999888777777788899999999
Q ss_pred ecchHhhhhHHHHHHHHhhCceeeeeCC--C--CHHHHHHHHHhcCc---ceeecchHHHHHHHhc---CC--cccccCC
Q 038104 230 SLPMFHCNGWTFTWGVAARGGTNVCLRN--T--TAYDMYRNISQHRV---THMCCAPIVFNILLQA---KP--EERKEIA 297 (567)
Q Consensus 230 ~~p~~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~---~~--~~~~~l~ 297 (567)
.+|++|.+|+...+.+++.|++++++.+ + ++..+++.+.++++ +.+.++|.++..++.. .. .....++
T Consensus 227 ~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~ 306 (631)
T PRK07769 227 WLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLS 306 (631)
T ss_pred eCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchh
Confidence 9999999999887778888999888753 3 88899999999886 7899999988777643 11 1134678
Q ss_pred CceEEEEcCCCCCHHHHHHHHH-h---CC---eeeccccccccCCCccccccccccCC---------------CCC-chh
Q 038104 298 SPVQILTGGAPPPASLLEEIEL-L---GF---HVTHAYGLTEATGPALVCEWQSSWNQ---------------LPK-PDQ 354 (567)
Q Consensus 298 ~l~~~~~~g~~l~~~~~~~~~~-~---~~---~i~~~yG~tE~~~~~~~~~~~~~~~~---------------~~~-~~~ 354 (567)
++|.+++||+++++++.+.+.+ + |+ .+++.||+||++..++.......... ... ...
T Consensus 307 ~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 386 (631)
T PRK07769 307 NVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPN 386 (631)
T ss_pred heeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCC
Confidence 9999999999999999999874 4 33 59999999999765554321110000 000 000
Q ss_pred hhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc------------------C
Q 038104 355 AKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK------------------N 416 (567)
Q Consensus 355 ~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~ 416 (567)
.....++|.|.++. .++++|.+++.+++.| +.|||+++||+++.||+++++.+.+.|. +
T Consensus 387 ~~~~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~ 463 (631)
T PRK07769 387 AVAQVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDA 463 (631)
T ss_pred ceeEEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCC
Confidence 01124678888887 8889987788888877 8999999999999999999999988884 3
Q ss_pred CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHc-CCCceE--EEEEeecC------------------
Q 038104 417 GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFR-HPRVLE--AAVVAMPH------------------ 475 (567)
Q Consensus 417 ~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~------------------ 475 (567)
|||+|||+|+++ +|+++++||.||+||++|++|+|.+||.+|.+ +|.|.+ ++|+++++
T Consensus 464 gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~ 542 (631)
T PRK07769 464 LWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFD 542 (631)
T ss_pred CeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccc
Confidence 899999999995 99999999999999999999999999999996 899998 89999988
Q ss_pred -CCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCC-Cc-cccEEEEeC--CCCCCCCCccchHHHHHHHHhh
Q 038104 476 -PQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSR-FM-VPKKVVILP--ELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 476 -~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~-~p~~i~~v~--~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+..|++++++|++.++.. ..+.++|.++++++++. |+ .|+.+.+++ +||+|++||++|++|++++.+.
T Consensus 543 ~~~~ge~~~a~v~~~~~~~----~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 543 PEDTSEQLVIVAERAPGAH----KLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred cCCCCccEEEEEEecCccc----cccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcC
Confidence 557889999999876531 35678999999999985 66 588888887 6999999999999999887653
No 58
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-65 Score=540.64 Aligned_cols=516 Identities=27% Similarity=0.428 Sum_probs=423.4
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEe--CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIY--EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
+....|+.++|.+.++++|+++|+++ .+..+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 14 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 14 PLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred CcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 34567899999999999999999988 4578999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccch-----HHHHHHhhhhhc-------cccCCCCCeEEEEeCCCCCCC
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYV-----QLAREALKLYFV-------EDRDAAGPRVILIDDIDSPTG 155 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~-------~~~~~~~~~ii~~~~~~~~~~ 155 (567)
|++++++++.++.+++.++++.++++++|++.... ..+.+....... .........++..+....
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP--- 170 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC---
Confidence 99999999999999999999999999999976432 222222221100 000001122232222111
Q ss_pred ccCCcccHHHHHhcCCCC-----CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEe
Q 038104 156 IRFGEFEYEQFVQMGDPR-----FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWS 230 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 230 (567)
.+...|.+........ ........++++++++|||||||.||+|.++|+++..++......+++.++|+++..
T Consensus 171 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~ 248 (558)
T PRK12583 171 --PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVP 248 (558)
T ss_pred --ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEe
Confidence 1223444443322211 011122456789999999999999999999999998888887778889999999999
Q ss_pred cchHhhhhHHH-HHHHHhhCceeeee-CCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCC
Q 038104 231 LPMFHCNGWTF-TWGVAARGGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAP 308 (567)
Q Consensus 231 ~p~~~~~g~~~-~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~ 308 (567)
.|++|.+|+.. ++.++..|+++++. ...++..+++.++++++|++.++|+++..++.........++++|.+++||++
T Consensus 249 ~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~ 328 (558)
T PRK12583 249 VPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAP 328 (558)
T ss_pred cCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCC
Confidence 99999999865 56666777776654 35789999999999999999999999998887655555678899999999999
Q ss_pred CCHHHHHHHH-HhC-CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 309 PPASLLEEIE-LLG-FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 309 l~~~~~~~~~-~~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
+++++.+.+. .++ ..+++.||+||++++++.+..+.. .......+|.|.++. .+++++.+ +.+++.+
T Consensus 329 ~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~~-~~~~~~g- 397 (558)
T PRK12583 329 CPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDPD-GATVPRG- 397 (558)
T ss_pred CCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECCC-CCCCCCC-
Confidence 9999999987 554 579999999999987665432111 111235789999987 89999986 6777776
Q ss_pred cceeEEEEecCccchhccCChhhhhhcc-cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCc
Q 038104 387 KTMGEIVLRGSSIMKGYLKNEEATSQSF-KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRV 465 (567)
Q Consensus 387 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 465 (567)
+.|||+++|+.++.||+++++.+...| .++||+|||+|+++++|.+++.||.+|+++++|.+|+|.+||+.|.++++|
T Consensus 398 -~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v 476 (558)
T PRK12583 398 -EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAV 476 (558)
T ss_pred -CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCe
Confidence 789999999999999999999998887 689999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 466 LEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 466 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
.+++|++++++..++.++++++..++. ..+..+++++++++|+.|++|..++++++||+|.+||++|+.|++++.
T Consensus 477 ~~~~v~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~ 551 (558)
T PRK12583 477 ADVQVFGVPDEKYGEEIVAWVRLHPGH-----AASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISI 551 (558)
T ss_pred eEEEEEeeecCCCCcEEEEEEEECCCC-----CCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHH
Confidence 999999999988888899999876554 456889999999999999999999999999999999999999999876
Q ss_pred hh
Q 038104 546 NF 547 (567)
Q Consensus 546 ~~ 547 (567)
+-
T Consensus 552 ~~ 553 (558)
T PRK12583 552 EE 553 (558)
T ss_pred hh
Confidence 64
No 59
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.1e-65 Score=536.12 Aligned_cols=497 Identities=26% Similarity=0.380 Sum_probs=425.1
Q ss_pred CCHHHHHHHHHHHcCCceEEEe-CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIY-EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.++.+++.+++ .+|+++|+.+ .++.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v 81 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFL 81 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEE
Confidence 57899999999 9999999998 567999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|+++..+.+++.++++.+++++++++......+....... ....++.++.... ..+.+.......
T Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--------~~~~~~~~~~~~ 146 (504)
T PRK07514 82 PLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA-------GAPHVETLDADGT--------GSLLEAAAAAPD 146 (504)
T ss_pred ECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc-------CCceEEEecCCCc--------ccHHHhhhhcCc
Confidence 9999999999999999999999999988776665543321 2223444433211 112222211111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCce
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGT 251 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~ 251 (567)
. ........+++++++|||||||.||+|.++|+++...+......+++.++|+++..+|++|..|+.. .+.+++.|++
T Consensus 147 ~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 147 D-FETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred c-cCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1 1122355689999999999999999999999999988877777788999999999999999999865 6677889999
Q ss_pred eeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccc
Q 038104 252 NVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGL 330 (567)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~ 330 (567)
+++.+..++..+++.+. ++|.+.++|.++..++.........++++|.+++||+++++++.+.+. .++.++++.||+
T Consensus 226 ~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~ 303 (504)
T PRK07514 226 MIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGM 303 (504)
T ss_pred EEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeeccc
Confidence 99988889999999994 699999999999999877655566788999999999999999999998 568999999999
Q ss_pred cccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhh
Q 038104 331 TEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEAT 410 (567)
Q Consensus 331 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 410 (567)
||++....... ........+|.|+++. .++++|++++.+++.+ +.|||+++|+.++.||+++++.+
T Consensus 304 tE~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy~~~~~~~ 369 (504)
T PRK07514 304 TETNMNTSNPY-----------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGYWRMPEKT 369 (504)
T ss_pred ccccccccCCc-----------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCccccccCCchhh
Confidence 99975443211 1111235689999998 9999997788888877 78999999999999999999999
Q ss_pred hhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEee
Q 038104 411 SQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVK 489 (567)
Q Consensus 411 ~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~ 489 (567)
.+.|. ++||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||.++.++++|.+++|++++++..|+.++++++..
T Consensus 370 ~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~ 449 (504)
T PRK07514 370 AEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPK 449 (504)
T ss_pred hhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEEC
Confidence 98887 88999999999999999999999999999999999999999999999999999999999888888899999887
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 490 TNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
++. ..+.++++++++++++.+++|..+++++++|+|.+||++|++|+++++++.
T Consensus 450 ~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 450 PGA-----ALDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred CCC-----CCCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhhc
Confidence 654 457889999999999999999999999999999999999999999988763
No 60
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.8e-65 Score=537.91 Aligned_cols=501 Identities=24% Similarity=0.388 Sum_probs=417.4
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
..|+.++|++.++++|+++|+++.+ +.+||.||.++++++|++|.++|+++||+|+++++|+++++++++||+++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~ 85 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKI 85 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 4589999999999999999999854 68999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHH
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFV 167 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
|++++++++..+.+++.++++.++++.++++.+....+.++...... ....++..+.... ...+...+.++.
T Consensus 86 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~ 157 (517)
T PRK08008 86 GAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDAT-----PLRHICLTRVALP---ADDGVSSFTQLK 157 (517)
T ss_pred CeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccc-----cCcEEEEecCCCc---ccccccCHHHHh
Confidence 99999999999999999999999999999999887777665543221 2344444443211 112334455544
Q ss_pred hcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHH
Q 038104 168 QMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVA 246 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~ 246 (567)
...............+++++++|||||||.||+|.++|.++............+..++++++.+|++|..+... ++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 237 (517)
T PRK08008 158 AQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAF 237 (517)
T ss_pred ccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHH
Confidence 43322222222345689999999999999999999999999865544444446788999999999999877654 67777
Q ss_pred hhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeee
Q 038104 247 ARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVT 325 (567)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~ 325 (567)
..|+++++.+.+++..+++.++++++|++.++|.+++.++............++.+.++ ++++++....+. .++++++
T Consensus 238 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 316 (517)
T PRK08008 238 SAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERFGVRLL 316 (517)
T ss_pred hcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHhCCeEE
Confidence 88999999888999999999999999999999999999887654443445577777765 478888888877 5699999
Q ss_pred ccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEec---Cccchh
Q 038104 326 HAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRG---SSIMKG 402 (567)
Q Consensus 326 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~---~~~~~g 402 (567)
+.||+||+++.++..... .......+|.|+++. .++++|. ++.+++.+ +.|||+++| ++++.|
T Consensus 317 ~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~~~~g 382 (517)
T PRK08008 317 TSYGMTETIVGIIGDRPG----------DKRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGVPGKTIFKE 382 (517)
T ss_pred eeccccccccccccCCcc----------ccccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCCCCcchhhh
Confidence 999999998655543211 111234689999887 8999985 56777776 789999998 689999
Q ss_pred ccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCc
Q 038104 403 YLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGES 481 (567)
Q Consensus 403 y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (567)
|+++++.+.+.|. +|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.++..++.|.+++|++++++..+++
T Consensus 383 y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~ 462 (517)
T PRK08008 383 YYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEA 462 (517)
T ss_pred HhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCce
Confidence 9999999998886 899999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 482 PCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 482 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
+.++|+...+. ..+.++++++++++++.|++|..++++++||+|++||++|+.|+
T Consensus 463 ~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 463 IKAFVVLNEGE-----TLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EEEEEEECCCC-----CCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 99999987654 46678999999999999999999999999999999999999874
No 61
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-66 Score=551.49 Aligned_cols=512 Identities=21% Similarity=0.271 Sum_probs=399.7
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeC--C---eeeeHHHHHHHHHHHHHHHHh---CCCCCC-----------CEEEEEcC
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYE--G---ARFNWLQTYDRCRRLASSLRS---LNMPKH-----------SVVSVLAP 72 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~el~~~v~~la~~L~~---~g~~~g-----------d~V~i~~~ 72 (567)
.--|+.++|.+.++++|+++|+.+. + +.+||+|+.+++.++|++|.+ +|+++| |+|+|+++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 3569999999999999999999873 2 689999999999999999997 499999 99999999
Q ss_pred ChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCC
Q 038104 73 NIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDS 152 (567)
Q Consensus 73 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 152 (567)
|+++|+++++||+++|++.+|++++++.+++.++|+.+++++++++.+..+.+.+....++ ..+.++.++....
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~------~l~~ii~~~~~~~ 212 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP------HLKKLIILDTLIK 212 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC------CceEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999998887777766554333 4566777754211
Q ss_pred CC-----------------Cc---------------------------------------------cCCcccHHHHHhcC
Q 038104 153 PT-----------------GI---------------------------------------------RFGEFEYEQFVQMG 170 (567)
Q Consensus 153 ~~-----------------~~---------------------------------------------~~~~~~~~~~~~~~ 170 (567)
.. .. ......|.++....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 292 (746)
T PTZ00342 213 SKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNK 292 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhc
Confidence 10 00 00001122222221
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc--cCCCCCEEEEecchHhhhhHHHHHHHHhh
Q 038104 171 DPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW--EMGSAPVYLWSLPMFHCNGWTFTWGVAAR 248 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 248 (567)
.. ..+.....++++++++|||||||.||||++||++++..+....... .....|++++.+|++|.+++...+.+++.
T Consensus 293 ~~-~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~ 371 (746)
T PTZ00342 293 TT-NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFML 371 (746)
T ss_pred cc-CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHc
Confidence 11 1112234678999999999999999999999999988776544321 23356899999999999999877788889
Q ss_pred CceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhc--------CCccc---------------------------
Q 038104 249 GGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQA--------KPEER--------------------------- 293 (567)
Q Consensus 249 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~--------~~~~~--------------------------- 293 (567)
|+++++.+. ++..+++.|++++||+++++|.++++|... .....
T Consensus 372 G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 450 (746)
T PTZ00342 372 GGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITH 450 (746)
T ss_pred CCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHH
Confidence 999888765 889999999999999999999999998752 10000
Q ss_pred -------ccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCcee
Q 038104 294 -------KEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISI 365 (567)
Q Consensus 294 -------~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 365 (567)
...+++|.+++||+++++++.++++ .+++++++.||+||+++.++..... .....++|.|+
T Consensus 451 v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~p~ 519 (746)
T PTZ00342 451 ISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGGPI 519 (746)
T ss_pred HHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccCcC
Confidence 0126899999999999999999998 5799999999999998766543210 12236789998
Q ss_pred -eeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCcee
Q 038104 366 -LTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVI 443 (567)
Q Consensus 366 -~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i 443 (567)
++. +++++|.++....... ..|||+++||+++.|||++|+.|.+.|. +|||+|||+|++|+||++++.||++|+|
T Consensus 520 ~pg~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlI 596 (746)
T PTZ00342 520 SPNT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLV 596 (746)
T ss_pred CCcE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeE
Confidence 777 9999886543333222 4599999999999999999999999996 8999999999999999999999999999
Q ss_pred e-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC-----C------CCC-CCC----------
Q 038104 444 I-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA-----G------KTD-DVN---------- 500 (567)
Q Consensus 444 ~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~-----~------~~~-~~~---------- 500 (567)
+ .+|++|+|.+||+++.++|.|.+++|+|.+. ...++|+|++..... . .+. ..+
T Consensus 597 kls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~---~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~ 673 (746)
T PTZ00342 597 KLSQGEYIETDMLNNLYSQISFINFCVVYGDDS---MDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETI 673 (746)
T ss_pred EeCCCEEEchHHHHHHHhcCCCccEEEEEccCC---ccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhh
Confidence 9 6899999999999999999999999998642 225888887764210 0 000 000
Q ss_pred -----HHHHHHHH-----HhhCCCCccccEEEEeC-CC----CCCCCCccchHHHHHHHHhhh
Q 038104 501 -----EADILSYC-----RENLSRFMVPKKVVILP-EL----PKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 501 -----~~~l~~~~-----~~~l~~~~~p~~i~~v~-~~----P~t~~GKv~r~~l~~~~~~~~ 548 (567)
.+.+.+.+ ++.|+.|.++++|.++. .| -.|++.|++|+.+.+.|++..
T Consensus 674 ~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i 736 (746)
T PTZ00342 674 NNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFI 736 (746)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHH
Confidence 11122222 22588999999999875 34 389999999999999999764
No 62
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-66 Score=558.60 Aligned_cols=478 Identities=20% Similarity=0.239 Sum_probs=396.5
Q ss_pred CHHHHHHHHHHH--cCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 15 SPLTFLKRAAAV--YGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 15 tl~~~l~~~a~~--~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
|+.+++.+.+.. +||++|+++. ..+||+||+++++++|++|.++|+++||+|+|+++|+++++++++||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 899999999886 7999999874 5899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCC-
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGD- 171 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (567)
|++|.++.+++.++++.++++++|++......+... .++. ...+.....
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--------------~~~~----------------~~~~~~~~~~ 133 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQPS--------------RVAE----------------AAELMSEAAR 133 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc--------------ccch----------------hhhhhhhccc
Confidence 999999999999999999999999986643322110 0000 000000000
Q ss_pred CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh-hhccCCCCCEEEEecchHhhhhHH-HHHHHHhhC
Q 038104 172 PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI-LGWEMGSAPVYLWSLPMFHCNGWT-FTWGVAARG 249 (567)
Q Consensus 172 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g 249 (567)
..........++++++++|||||||.||+|.++|+++........ ..+++.++|+++...|++|..++. .++.++..|
T Consensus 134 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G 213 (705)
T PRK06060 134 VAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATG 213 (705)
T ss_pred cCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcC
Confidence 000011124567899999999999999999999999887665543 356788999999999999998875 467788899
Q ss_pred ceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeec
Q 038104 250 GTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTH 326 (567)
Q Consensus 250 ~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~ 326 (567)
+++++.+ ..++..++..++++++|+++++|+++.+++.... ...++++|.+++||+++++++.+.+.+ + ++++++
T Consensus 214 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~ 291 (705)
T PRK06060 214 GSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILD 291 (705)
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEe
Confidence 9998876 4688889999999999999999999999987542 235779999999999999999999884 5 589999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKN 406 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 406 (567)
.||+||++..+..+... ......+|.|+++. .++++|. .+.+++.| +.|||+++|++++.||+++
T Consensus 292 ~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~~v~~GY~~~ 356 (705)
T PRK06060 292 GIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGPAIAKGYWNR 356 (705)
T ss_pred eeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccchhhhhhhCC
Confidence 99999998655432210 01124679999988 8999986 46667776 7899999999999999999
Q ss_pred hhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEE
Q 038104 407 EEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFI 486 (567)
Q Consensus 407 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 486 (567)
++.+.. .+|||+|||+|+++++|++++.||.||+||++|++|+|.+||..|.+++.|.+++|++++++..++.++++|
T Consensus 357 ~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~v 434 (705)
T PRK06060 357 PDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFL 434 (705)
T ss_pred Cccccc--CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEE
Confidence 986532 478999999999999999999999999999999999999999999999999999999999988888899998
Q ss_pred EeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHH
Q 038104 487 SVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALA 544 (567)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~ 544 (567)
+...+... ......+++++++++|+.|++|..|+++++||+|.+||++|++|++.+
T Consensus 435 v~~~~~~~--~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 435 VATSGATI--DGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred EeccccCc--ChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 87654310 011235788999999999999999999999999999999999999875
No 63
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-65 Score=536.92 Aligned_cols=488 Identities=23% Similarity=0.331 Sum_probs=397.2
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
-|+.++|.+++ .|+++|+++.+..+||.||.++++++|..|.++|+ ++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 47888888765 79999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|++|.++.+++.++++.++++++|++.+....+.+.. . ....++.++. ..|.++......
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~-------~~~~~i~~~~-----------~~~~~~~~~~~~ 140 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--L-------PGVRVLDVDT-----------PAYAELVAAAGA 140 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--c-------cCceEEEccc-----------hhhhhhhccccC
Confidence 9999999999999999999999999877665544321 0 1123333322 123333221111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHH-HHHhhCce
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTW-GVAARGGT 251 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~~~~~g~~ 251 (567)
..+.....++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|.+++...+ .++..|++
T Consensus 141 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 141 -LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred -cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 1121225668999999999999999999999999988887777788899999999999999999887644 46778888
Q ss_pred eeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccc
Q 038104 252 NVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGL 330 (567)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~ 330 (567)
+++.+.+++..+++.++++++|++..+|..+..++..........++++ +.+ |++++++..+.+. .+++++++.||+
T Consensus 220 ~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~-~~~-G~~~~~~~~~~~~~~~~~~l~~~YG~ 297 (540)
T PRK13388 220 VALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLR-VAF-GNEASPRDIAEFSRRFGCQVEDGYGS 297 (540)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceE-EEE-CCCCCHHHHHHHHHHhCCceeccccc
Confidence 8888788999999999999999999999999998865433222233455 334 5566777777776 669999999999
Q ss_pred cccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCC-----------CCcceeEEEEe-cCc
Q 038104 331 TEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPR-----------DGKTMGEIVLR-GSS 398 (567)
Q Consensus 331 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~-----------~~~~~Gel~v~-~~~ 398 (567)
||++.++.... ......+|.|+++. ++.+.+...+++. .+++.|||+++ |+.
T Consensus 298 tE~~~~~~~~~-------------~~~~~~vG~p~~g~---~i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~ 361 (540)
T PRK13388 298 SEGAVIVVREP-------------GTPPGSIGRGAPGV---AIYNPETLTECAVARFDAHGALLNADEAIGELVNTAGAG 361 (540)
T ss_pred ccccceeecCC-------------CCCCCCCCCCCCCc---EEEcCCCCccccceeccCccccccCCCcceEEEEecCCc
Confidence 99986654321 01124678887654 4443322222111 11268999998 999
Q ss_pred cchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCC
Q 038104 399 IMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQW 478 (567)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 478 (567)
++.||+++++.+.+.|.+|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.+|.++|+|.+|+|++++++..
T Consensus 362 ~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~ 441 (540)
T PRK13388 362 FFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERV 441 (540)
T ss_pred ccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceeEEEEeecCCCCCCCCCCHHHHHHHHHhh--CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 479 GESPCAFISVKTNSAGKTDDVNEADILSYCREN--LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 479 g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~--l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
|+.+++++++.++. ..+.++++++++.+ |+.|++|..++++++||+|++||++|++|+++..+.
T Consensus 442 g~~~~~~v~~~~~~-----~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 442 GDQVMAALVLRDGA-----TFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred CceeEEEEEECCCC-----cCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 98888888887654 46778899999764 999999999999999999999999999999976554
No 64
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-65 Score=537.23 Aligned_cols=518 Identities=25% Similarity=0.294 Sum_probs=417.4
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
...++.++|.+.++.+|+++|++..+.++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 8 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~ 87 (540)
T PRK06164 8 RADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATV 87 (540)
T ss_pred CCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEE
Confidence 55699999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchH-HHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQ-LAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
+|+++..+.+++.++++.+++++++++.+... .+.+.+....... ......++.++....... ......+..+....
T Consensus 88 v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 165 (540)
T PRK06164 88 IAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDA-LPPLRAIAVVDDAADATP-APAPGARVQLFALP 165 (540)
T ss_pred EecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccc-cCCcceEEEeccCcccCC-CCCccccccccccc
Confidence 99999999999999999999999999876421 1111111111000 002234444442111000 00001111111111
Q ss_pred CCCCCC---CCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHh
Q 038104 171 DPRFLP---EEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAA 247 (567)
Q Consensus 171 ~~~~~~---~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 247 (567)
...... ......+++++++|||||||.||+|.++|+++..........+++.++++++..+|++|.+|+..++.++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 245 (540)
T PRK06164 166 DPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGALA 245 (540)
T ss_pred ccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHHHh
Confidence 110000 11234578999999999999999999999999988888777888999999999999999999988888999
Q ss_pred hCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcC-CCCCHHHHHHHHHhCCeeec
Q 038104 248 RGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGG-APPPASLLEEIELLGFHVTH 326 (567)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g-~~l~~~~~~~~~~~~~~i~~ 326 (567)
.|+++++.+.+++..+++.|+++++|+++++|.++..|.+.. .....+++++.+.++| .+...++.+++...++++++
T Consensus 246 ~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
T PRK06164 246 GGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARARGVPLTG 324 (540)
T ss_pred cCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhcCCceec
Confidence 999999998899999999999999999999999999998872 2345677888876665 55566677776666899999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCcee-eeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISI-LTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLK 405 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 405 (567)
.||+||+++++........ ........|.+. ++. .+++.|.+++.+++.+ +.||||++|++++.||++
T Consensus 325 ~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~ 393 (540)
T PRK06164 325 LYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIRAPSLMRGYLD 393 (540)
T ss_pred ceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEecccccccccC
Confidence 9999999876654332110 011113456665 444 7888888788888777 889999999999999999
Q ss_pred Chhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeE
Q 038104 406 NEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCA 484 (567)
Q Consensus 406 ~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 484 (567)
+++.+.+.|. +|||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||.+|..+++|.+++|++++. ..+..+++
T Consensus 394 ~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~~~~ 472 (540)
T PRK06164 394 NPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTVPVA 472 (540)
T ss_pred CchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCceeEEE
Confidence 9999999885 789999999999999999999999999999999999999999999999999999999884 44567888
Q ss_pred EEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCC---ccchHHHHHHHHhhhc
Q 038104 485 FISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATG---KIQKFQLRALAKNFAV 549 (567)
Q Consensus 485 ~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~G---Kv~r~~l~~~~~~~~~ 549 (567)
+++..++. ..+.+++.+++++.++.|++|+.+++++++|+|.+| |++|+.|++++++...
T Consensus 473 ~vv~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~ 535 (540)
T PRK06164 473 FVIPTDGA-----SPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLA 535 (540)
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhh
Confidence 88876654 467899999999999999999999999999999999 9999999999877643
No 65
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-64 Score=534.96 Aligned_cols=520 Identities=25% Similarity=0.315 Sum_probs=423.3
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
+-+.+..++.++|+++++.+|+++|+.+.++.+||.||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++
T Consensus 27 ~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 106 (567)
T PRK06178 27 EYPHGERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKL 106 (567)
T ss_pred CCCcCcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHh
Confidence 33445678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCC-----cc-----
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTG-----IR----- 157 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----~~----- 157 (567)
|++++|++|..+.+++.++++.++++++++++...+.+.+..... ....++.......... ..
T Consensus 107 G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 179 (567)
T PRK06178 107 GAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET-------SLRHVIVTSLADVLPAEPTLPLPDSLRA 179 (567)
T ss_pred CeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC-------CcceEEEecccccccccccccccccccc
Confidence 999999999999999999999999999999988877766654322 1223332221110000 00
Q ss_pred --CCcccHHHHHhcCC--CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh-hccCCCCCEEEEecc
Q 038104 158 --FGEFEYEQFVQMGD--PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL-GWEMGSAPVYLWSLP 232 (567)
Q Consensus 158 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~-~~~~~~~d~~~~~~p 232 (567)
.....+.++..... ...........+++++++|||||||.||+|.++|.++......... ...+..+|+++..+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 259 (567)
T PRK06178 180 PRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLP 259 (567)
T ss_pred ccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecc
Confidence 00011212221111 1111122355789999999999999999999999998876544333 356788999999999
Q ss_pred hHhhhhHH-HHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEE--cCCCC
Q 038104 233 MFHCNGWT-FTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILT--GGAPP 309 (567)
Q Consensus 233 ~~~~~g~~-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~--~g~~l 309 (567)
++|..|+. .++.++..|+++++.+.+++..++..+++++++.+.++|..+..++.........+++++.+.. .++.+
T Consensus 260 ~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~ 339 (567)
T PRK06178 260 EFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKL 339 (567)
T ss_pred hHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccC
Confidence 99999985 4677889999999999999999999999999999999999999988765444455667777654 45899
Q ss_pred CHHHHHHHH-HhCCeeec-cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCc
Q 038104 310 PASLLEEIE-LLGFHVTH-AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGK 387 (567)
Q Consensus 310 ~~~~~~~~~-~~~~~i~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~ 387 (567)
+++..+.++ .++..++. .||+||+++.+........ ...........+|.|+++. .+++.|.+.+..++.+
T Consensus 340 ~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~----~~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g-- 412 (567)
T PRK06178 340 NPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQD----DDFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG-- 412 (567)
T ss_pred CHHHHHHHHHHhCCcccccccccccccccceecccccc----CccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--
Confidence 999999998 45776664 7999999866544221000 0000112234689999998 8999997778888877
Q ss_pred ceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceE
Q 038104 388 TMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLE 467 (567)
Q Consensus 388 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 467 (567)
+.|||+++|++++.||+++++.+...|.+|||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||+++.++++|.+
T Consensus 413 ~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~ 492 (567)
T PRK06178 413 AEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLG 492 (567)
T ss_pred CceEEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 468 AAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 468 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+++++.+++..|+.++++|+..++. ..+.++++++++++++.|++|. +++++++|+|++||++|+.|++++.+.
T Consensus 493 ~~v~~~~~~~~g~~~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 493 SAVVGRPDPDKGQVPVAFVQLKPGA-----DLTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred EEEEcCcCcccCcceEEEEEeCCCC-----cCCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 9999999888888999999887554 4578899999999999999996 888999999999999999999988764
No 66
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-65 Score=529.86 Aligned_cols=478 Identities=27% Similarity=0.371 Sum_probs=401.3
Q ss_pred HHHHHHcCCceEEEe--CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC
Q 038104 21 KRAAAVYGNRTSIIY--EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL 98 (567)
Q Consensus 21 ~~~a~~~p~~~a~~~--~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (567)
+.+++.+||++|+.+ .+..+||+||.+.++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC-CCCCC
Q 038104 99 DAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP-RFLPE 177 (567)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 177 (567)
+.+++.++++.++++++++++..... . ... ..+.++...... .....
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~---------------~-~~~----------------~~~~~~~~~~~~~~~~~~ 129 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG---------------R-TDV----------------EDLAAFIASADALEPADT 129 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc---------------c-ccc----------------cchhhhhhhccccccccC
Confidence 99999999999999999997653221 0 000 011111110000 00111
Q ss_pred CCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCceeeeeC
Q 038104 178 EIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLR 256 (567)
Q Consensus 178 ~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~ 256 (567)
.....+++++++|||||||.||+|.++|+++...+........+..+|++++.+|++|.+|+.. +..++..|+++++.+
T Consensus 130 ~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~ 209 (488)
T PRK09088 130 PSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN 209 (488)
T ss_pred CCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC
Confidence 1244678999999999999999999999999877777666667889999999999999999876 555667788888888
Q ss_pred CCCHHHHHHHHH--hcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccC
Q 038104 257 NTTAYDMYRNIS--QHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEAT 334 (567)
Q Consensus 257 ~~~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~ 334 (567)
.+.+..++..+. ++++|.+.++|.++..+.+........+++++.+++||++++.+..+.+...++++++.||+||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~TE~~ 289 (488)
T PRK09088 210 GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGMSEAG 289 (488)
T ss_pred CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeecccccc
Confidence 888999988886 489999999999999998765544556789999999999999998888876689999999999998
Q ss_pred CCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcc
Q 038104 335 GPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSF 414 (567)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 414 (567)
++......+ .........+|.|.++. .+++.|. ++.+++.+ +.|||+++|++++.||+++++.+.+.+
T Consensus 290 ~~~~~~~~~--------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~~~~~~ 357 (488)
T PRK09088 290 TVFGMSVDC--------DVIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWRRPQATARAF 357 (488)
T ss_pred cccccCCCc--------ccccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcCChhhhhhhh
Confidence 754321100 00011224689999998 8999985 56677766 789999999999999999999988887
Q ss_pred c-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC
Q 038104 415 K-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA 493 (567)
Q Consensus 415 ~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 493 (567)
. +|||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||++|.++|+|.+++|++++++..|+..+++|+..++.
T Consensus 358 ~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~- 436 (488)
T PRK09088 358 TGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGA- 436 (488)
T ss_pred cCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCC-
Confidence 5 89999999999999999999999999999999999999999999999999999999999888888888888876554
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 494 GKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 494 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
..+..++.++++++++.|++|..++++++||+|++||++|++|++++.+.
T Consensus 437 ----~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 437 ----PLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred ----CCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999999999998765
No 67
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1e-64 Score=533.28 Aligned_cols=503 Identities=26% Similarity=0.377 Sum_probs=416.5
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
.|++.++.++|+++++ |+++|+++.++++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 21 ~~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~ 98 (536)
T PRK10946 21 YWQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGV 98 (536)
T ss_pred eecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCe
Confidence 4678899999999887 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccch----HHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHH
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYV----QLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQ 165 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 165 (567)
+++++.+.....++..+++.++++.++++.... ....+.+.... .....++.... .+...+.+
T Consensus 99 v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~--------~~~~~~~~ 165 (536)
T PRK10946 99 APVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEH-----SSLRVVLLLND--------DGEHSLDD 165 (536)
T ss_pred EEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhC-----CCceEEEEecC--------CCCccHHH
Confidence 888777777788899999999999999986531 11111111110 02222332221 11223444
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH--HH
Q 038104 166 FVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF--TW 243 (567)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~--~~ 243 (567)
+........ +.....++++++++|||||||.||+|.++|+++..........+++.++|++++.+|++|.+++.. ++
T Consensus 166 ~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~ 244 (536)
T PRK10946 166 AINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGAL 244 (536)
T ss_pred HhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHH
Confidence 443332221 122345689999999999999999999999999998888777888999999999999999988763 67
Q ss_pred HHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcC--CcccccCCCceEEEEcCCCCCHHHHHHHH-Hh
Q 038104 244 GVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAK--PEERKEIASPVQILTGGAPPPASLLEEIE-LL 320 (567)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~ 320 (567)
.++..|+++++.+.+++..+++.+++++++++.++|..+..++... ......+++++.+++||+++++++.+.+. .+
T Consensus 245 ~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~ 324 (536)
T PRK10946 245 GVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL 324 (536)
T ss_pred HHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc
Confidence 7888999999888889999999999999999999999999998762 22334577999999999999999999997 57
Q ss_pred CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccc
Q 038104 321 GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIM 400 (567)
Q Consensus 321 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~ 400 (567)
++++++.||+||+...+.... .........+|.|+.+...++++|. ++.+++.| +.|||+++|++++
T Consensus 325 g~~~~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~p~~~~~~v~i~d~-~~~~~~~g--~~Gel~v~g~~~~ 391 (536)
T PRK10946 325 GCQLQQVFGMAEGLVNYTRLD----------DSDERIFTTQGRPMSPDDEVWVADA-DGNPLPQG--EVGRLMTRGPYTF 391 (536)
T ss_pred CCeEEEeecccccceeeecCC----------CccccccccCCcccCCCceEEEECC-CCCCCCCC--CccEEEEecCccc
Confidence 999999999999653322110 0111223567888843338888885 56777776 8899999999999
Q ss_pred hhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCC
Q 038104 401 KGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWG 479 (567)
Q Consensus 401 ~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (567)
.||+++++.+.+.|. ++||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||.+|.++|+|.+++|++++++..|
T Consensus 392 ~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g 471 (536)
T PRK10946 392 RGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMG 471 (536)
T ss_pred hhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccC
Confidence 999999999998885 7999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
+.++++++..++ .+..++++.+++. ++.|++|..+++++++|+|++||++|++|++++.+..
T Consensus 472 ~~~~a~vv~~~~-------~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 472 EKSCAFLVVKEP-------LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred ceEEEEEEeCCC-------CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 989999886542 4678899999886 9999999999999999999999999999999987764
No 68
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-64 Score=534.54 Aligned_cols=507 Identities=26% Similarity=0.387 Sum_probs=414.8
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
.++.+++.+.++.+|+++|+++.++++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCC---CC---------------
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSP---TG--------------- 155 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~---~~--------------- 155 (567)
++|..+.+++.++++.++++.++++......+....... ....++........ ..
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT-------KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh-------ccceeEEeccccccccccccccchhhcccccccc
Confidence 999999999999999999999999886655443322110 11122211100000 00
Q ss_pred ---ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh-hccCC-CCCEEEEe
Q 038104 156 ---IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL-GWEMG-SAPVYLWS 230 (567)
Q Consensus 156 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~-~~~~~-~~d~~~~~ 230 (567)
.......|..+........ .......+++++++|||||||.||+|.++|+++..++..... .++.. ..+++++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 255 (563)
T PRK06710 177 KVSESETIHLWNSVEKEVNTGV-EVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGV 255 (563)
T ss_pred cccccchhhhhhhhhhcccccc-ccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEe
Confidence 0000011222211111110 111123478999999999999999999999998755443322 23333 34588899
Q ss_pred cchHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCC
Q 038104 231 LPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPP 309 (567)
Q Consensus 231 ~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l 309 (567)
+|++|.+|+.. ++.+++.|+++++.+.+++..+++.|+++++|++.++|+++..++.........+++++.+++||+++
T Consensus 256 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~ 335 (563)
T PRK06710 256 LPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPL 335 (563)
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcC
Confidence 99999998765 55677889999998888999999999999999999999999999876554455678999999999999
Q ss_pred CHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcc
Q 038104 310 PASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKT 388 (567)
Q Consensus 310 ~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~ 388 (567)
++++.+++. .++.++++.||+||++.++..+... .......+|.+.++. .+++++.+++.+++.+ +
T Consensus 336 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~ 402 (563)
T PRK06710 336 PVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--E 402 (563)
T ss_pred CHHHHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC--C
Confidence 999999988 5689999999999998765432210 011124678998887 8889987788888887 7
Q ss_pred eeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEE
Q 038104 389 MGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEA 468 (567)
Q Consensus 389 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 468 (567)
.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||++|.++++|.++
T Consensus 403 ~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~ 482 (563)
T PRK06710 403 IGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEV 482 (563)
T ss_pred ceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 469 AVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 469 ~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+|++++++..|+.++++++..++. ..+.++++++++++++.|++|..+.++++||+|.+||++|+.|++++..
T Consensus 483 ~v~~~~~~~~g~~~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 483 VTIGVPDPYRGETVKAFVVLKEGT-----ECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred EEEccccCCcCceeEEEEEECCCC-----CCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhh
Confidence 999999988899899999877664 4678899999999999999999999999999999999999999887654
No 69
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-64 Score=532.91 Aligned_cols=503 Identities=24% Similarity=0.380 Sum_probs=410.0
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.|+.++|+++++++|+++|+.+.+.++||.||.++++++|.+|.+. |+++||+|+++++|+++++++++||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999984 999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEe--C----------------CC--C
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILID--D----------------ID--S 152 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~--~----------------~~--~ 152 (567)
++++.++.+++.++++.+++++++++....+.+....... ....++... + .. .
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT-------GIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMV 176 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc-------CceEEEeechhhccccccchhcccccccccccc
Confidence 9999999999999999999999999876655544332211 001111000 0 00 0
Q ss_pred CCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc---------CCC
Q 038104 153 PTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE---------MGS 223 (567)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~---------~~~ 223 (567)
..........|.++................+++++++|||||||.||+|.++|+++..+.......+. +..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (562)
T PRK12492 177 PAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKE 256 (562)
T ss_pred cccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccC
Confidence 00001122345555443322211122345678999999999999999999999998766655443332 223
Q ss_pred -CCEEEEecchHhhhhHHH-HHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCce
Q 038104 224 -APVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPV 300 (567)
Q Consensus 224 -~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~ 300 (567)
.++++..+|++|.+++.. .+..+..|++.++.. ..++..+++.++++++|.+.++|+++..++.........++++|
T Consensus 257 ~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 336 (562)
T PRK12492 257 GQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALK 336 (562)
T ss_pred CCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccccccee
Confidence 357788999999999865 444556777666654 46888999999999999999999999999887655556678999
Q ss_pred EEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCC
Q 038104 301 QILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTM 379 (567)
Q Consensus 301 ~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~ 379 (567)
.+++||+++++++.+.+. .+++++++.||+||++++++.+.... ......+|.|+++. .++|+|. .+
T Consensus 337 ~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~-~~ 404 (562)
T PRK12492 337 LTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD-DG 404 (562)
T ss_pred EEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC-CC
Confidence 999999999999999988 56999999999999987665433111 11224689999988 8999986 56
Q ss_pred CCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHH
Q 038104 380 SSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENV 458 (567)
Q Consensus 380 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 458 (567)
.+++.+ +.|||+++|+.++.||+++++.+.+.|. +|||+|||+|+++++|.+++.||.+|+++.+|.+|+|.+||..
T Consensus 405 ~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~ 482 (562)
T PRK12492 405 NELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDV 482 (562)
T ss_pred CCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHH
Confidence 777776 7899999999999999999999988885 7899999999999999999999999999999999999999999
Q ss_pred HHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchH
Q 038104 459 LFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKF 538 (567)
Q Consensus 459 l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~ 538 (567)
|.++|.|.+++|++.++...|+.++++++.... ..+.++++++++++++.|++|..+.++++||+|.+||++|+
T Consensus 483 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~------~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~ 556 (562)
T PRK12492 483 VMAHPKVANCAAIGVPDERSGEAVKLFVVARDP------GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRR 556 (562)
T ss_pred HHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC------CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHH
Confidence 999999999999999988888888888876543 35678999999999999999999999999999999999999
Q ss_pred HHHHH
Q 038104 539 QLRAL 543 (567)
Q Consensus 539 ~l~~~ 543 (567)
+|+++
T Consensus 557 ~L~~~ 561 (562)
T PRK12492 557 ELRDI 561 (562)
T ss_pred HHHhh
Confidence 99865
No 70
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-64 Score=540.37 Aligned_cols=508 Identities=23% Similarity=0.255 Sum_probs=402.1
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.+.++.|+.++|.+.++++|+++|+++.++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 32 ~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 32 TPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++++++.++.+++.++++.++++++|++.+..+.+.+...... ....++..+..... ....|.++..
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~ 180 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA------RPPRLWVAGGDTLD-----DPEGYEDLAA 180 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc------ccceEEEecCcccc-----ccccHHHHhh
Confidence 999999999999999999999999999999887777665544322 11222222221100 0122333332
Q ss_pred cCCC--C--CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHH
Q 038104 169 MGDP--R--FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWG 244 (567)
Q Consensus 169 ~~~~--~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 244 (567)
.... . .........+++++++|||||||.||+|.++|.++..++......+++.++|+++..+|++|..|+...+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~ 260 (600)
T PRK08279 181 AAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWS 260 (600)
T ss_pred hcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHH
Confidence 1111 1 11112245689999999999999999999999999998888877889999999999999999999876544
Q ss_pred -HHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCC
Q 038104 245 -VAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGF 322 (567)
Q Consensus 245 -~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~ 322 (567)
++..|+++++.+.+++..+++.++++++|++.++|+++..++...........+++. ++|+.+++++.+.+. .++.
T Consensus 261 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~~~~ 338 (600)
T PRK08279 261 SVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQRFGI 338 (600)
T ss_pred HHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHHhCc
Confidence 556777777778889999999999999999999999999998765444444456664 347789999999988 5564
Q ss_pred -eeeccccccccCCCccccccccccCCCCCchhhhhccccCceee----ee--------cceEEeeCCCC-CCcCCCCcc
Q 038104 323 -HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISIL----TL--------ADVDVKNLDTM-SSVPRDGKT 388 (567)
Q Consensus 323 -~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~--------~~~~i~~~~~~-~~~~~~~~~ 388 (567)
.+++.||+||++..+.... . ....+|.+.. +. .+..+.+.+.. ..++.+ +
T Consensus 339 ~~l~~~YG~tE~~~~~~~~~-~-------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--~ 402 (600)
T PRK08279 339 PRILEFYAASEGNVGFINVF-N-------------FDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPG--E 402 (600)
T ss_pred ceeeeeecccccceeecccC-C-------------CCcccccccccccccceeeeeccCcCceeeCCCCccccCCCC--C
Confidence 5999999999875332210 0 0112333222 11 01222222111 133444 7
Q ss_pred eeEEE--EecCccchhccCChhhhhhcc-------cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 389 MGEIV--LRGSSIMKGYLKNEEATSQSF-------KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 389 ~Gel~--v~~~~~~~gy~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
.||++ +++++++.|| +++..+...| .++||+|||+|+++++|.+++.||.||+|+++|++|+|.+||++|
T Consensus 403 ~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l 481 (600)
T PRK08279 403 VGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENAL 481 (600)
T ss_pred ceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHH
Confidence 89998 7799999999 8888877665 257999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEEEeecCCCC-CCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchH
Q 038104 460 FRHPRVLEAAVVAMPHPQW-GESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKF 538 (567)
Q Consensus 460 ~~~~~v~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~ 538 (567)
.++|+|.+++|++++++.. +...++++++.++. ..+.++++++++++|+.|++|..++++++||+|.+||++|+
T Consensus 482 ~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~-----~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~ 556 (600)
T PRK08279 482 SGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGA-----EFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKV 556 (600)
T ss_pred hcCCCcceEEEEEeecCCCCCccceeEEEecCCc-----cCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHH
Confidence 9999999999999987653 44556666665433 56789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccc
Q 038104 539 QLRALAKNFAVSK 551 (567)
Q Consensus 539 ~l~~~~~~~~~~~ 551 (567)
.|++++.+.....
T Consensus 557 ~L~~~~~~~~~~~ 569 (600)
T PRK08279 557 DLRKEGFDPSKVD 569 (600)
T ss_pred HHhhcCCCccccC
Confidence 9999888885554
No 71
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.2e-65 Score=545.74 Aligned_cols=514 Identities=24% Similarity=0.319 Sum_probs=399.5
Q ss_pred CCHHHHHHHHHHHcCCceEEEeC------------C-----------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYE------------G-----------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVL 70 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~ 70 (567)
.|+.++|.+.++.+||++|+.+. + ..+||+|+.++++++|++|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 58999999999999999999431 1 238999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCC
Q 038104 71 APNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDI 150 (567)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 150 (567)
++|+++|+++++||+++|++++|+++.++.+++.++|+.++++++|++.+..+.+.+....+. ..+.++.+++.
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~------~l~~ii~~~~~ 211 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE------TVKRVIYMDDE 211 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC------CceEEEEECCC
Confidence 999999999999999999999999999999999999999999999999887776666544332 45677777653
Q ss_pred CCCCC------ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc-cCCC
Q 038104 151 DSPTG------IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW-EMGS 223 (567)
Q Consensus 151 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~-~~~~ 223 (567)
..... .......|.++...+.....+.....++++++++|||||||.||||+++|++++.++......+ ++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 212 GVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred CchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 22110 1122346777665543322222335678999999999999999999999999988777665443 5788
Q ss_pred CCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCC------C--HHHHHHHHHhcCcceeecchHHHHHHHhcCCcc---
Q 038104 224 APVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNT------T--AYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE--- 292 (567)
Q Consensus 224 ~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~------~--~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--- 292 (567)
+|++++.+|++|.+++...+..+..|+++.+.... + +..++..+++++||++.++|.++..+.+.....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 99999999999999987766666677776553321 1 234567899999999999999999986532100
Q ss_pred -------------------------------------------cccC-CCceEEEEcCCCCCHHHHHHHH-HhCCeeecc
Q 038104 293 -------------------------------------------RKEI-ASPVQILTGGAPPPASLLEEIE-LLGFHVTHA 327 (567)
Q Consensus 293 -------------------------------------------~~~l-~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~ 327 (567)
...+ +++|.+++||+++++++.+.++ .+++++++.
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~ 451 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQG 451 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEe
Confidence 0001 5899999999999999998888 469999999
Q ss_pred ccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCC-CCcceeEEEEecCccchhccCC
Q 038104 328 YGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPR-DGKTMGEIVLRGSSIMKGYLKN 406 (567)
Q Consensus 328 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~-~~~~~Gel~v~~~~~~~gy~~~ 406 (567)
||+||+++.++.+... ......+|.|+++. +++++|.+++..... .....|||+++||+++.|||++
T Consensus 452 YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~ 519 (696)
T PLN02387 452 YGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKN 519 (696)
T ss_pred echhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcCC
Confidence 9999998766543211 11235789999998 999998544332211 1114599999999999999999
Q ss_pred hhhhhhccc---CC--cccCCceEEEecCCcEEEEccCCceeee-CceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 407 EEATSQSFK---NG--WFRTGDVGVIHPDGYLEIKDRSKDVIIS-GGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 407 ~~~~~~~~~---~~--~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
|+.|.+.|. +| ||+|||+|++|+||++++.||++|+||. +|++|+|.+||++|.++|.|.+++|++.+.. .
T Consensus 520 pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~ 596 (696)
T PLN02387 520 QEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---S 596 (696)
T ss_pred HHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---c
Confidence 999999983 35 9999999999999999999999999996 6999999999999999999999999987632 3
Q ss_pred ceeEEEEeecCCCC-----CCC-----------CCCHHHHHHHH-----HhhCCCCccccEEEEeCC-C-----CCCCCC
Q 038104 481 SPCAFISVKTNSAG-----KTD-----------DVNEADILSYC-----RENLSRFMVPKKVVILPE-L-----PKTATG 533 (567)
Q Consensus 481 ~~~~~v~~~~~~~~-----~~~-----------~~~~~~l~~~~-----~~~l~~~~~p~~i~~v~~-~-----P~t~~G 533 (567)
.++++|++...... .+. ....+.+.+.+ ++.|..|.+|+.|.++.+ | -.|++.
T Consensus 597 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~ 676 (696)
T PLN02387 597 YCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAAL 676 (696)
T ss_pred eEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhh
Confidence 47788876542100 000 00112233333 235899999999998875 3 278899
Q ss_pred ccchHHHHHHHHhhh
Q 038104 534 KIQKFQLRALAKNFA 548 (567)
Q Consensus 534 Kv~r~~l~~~~~~~~ 548 (567)
|++|+.+++.|++..
T Consensus 677 K~~R~~i~~~y~~~i 691 (696)
T PLN02387 677 KLKREQIRKKFKDDL 691 (696)
T ss_pred hhhhHHHHHHHHHHH
Confidence 999999999998864
No 72
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6e-65 Score=542.48 Aligned_cols=504 Identities=23% Similarity=0.302 Sum_probs=399.2
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCC---------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHH
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEG---------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHF 82 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (567)
+.+|+.++++++++++|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|+++++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 44799999999999999999998732 4899999999999999999986 9999999999999999999999
Q ss_pred Hhhhccceeeec-cCCCC--hHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCC
Q 038104 83 AVPMAEAVLNTI-NVRLD--AKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFG 159 (567)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 159 (567)
||+++|++++|+ ++.++ .+++.++++.++++++|++.+..+.+.+........ ....++.+++....
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~------ 180 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL----RRPRVIAIDAIPDS------ 180 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc----cCceEEEecccccc------
Confidence 999999999999 56665 789999999999999999988766655443322100 11334444321100
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc-CCCCCEEEEecchHhhhh
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE-MGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~g 238 (567)
..... ......++++++++|||||||.||||.++|+++..++......++ +.++++++..+|++|..|
T Consensus 181 ----------~~~~~-~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g 249 (612)
T PRK12476 181 ----------AGESF-VPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMG 249 (612)
T ss_pred ----------ccccc-cCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccc
Confidence 00000 111245679999999999999999999999999877766666667 788899999999999999
Q ss_pred HHHHHHHHhhCceeeeeCC--C--CHHHHHHHHH--hcCcceeecchHHHHHHHhcCC----cccccCCCceEEEEcCCC
Q 038104 239 WTFTWGVAARGGTNVCLRN--T--TAYDMYRNIS--QHRVTHMCCAPIVFNILLQAKP----EERKEIASPVQILTGGAP 308 (567)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~----~~~~~l~~l~~~~~~g~~ 308 (567)
+...+.+++.|++++++.+ + ++..+++.++ +++++.+.++|.++..++.... .....+++++ +++||++
T Consensus 250 ~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~ 328 (612)
T PRK12476 250 LSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEP 328 (612)
T ss_pred hHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccC
Confidence 9877777777887777653 2 7889999995 5899999999999888776421 1234578899 9999999
Q ss_pred CCHHHHHHHHH-h---CC---eeeccccccccCCCcccccccccc----------------CCCCCchhhhhccccCcee
Q 038104 309 PPASLLEEIEL-L---GF---HVTHAYGLTEATGPALVCEWQSSW----------------NQLPKPDQAKLKARQGISI 365 (567)
Q Consensus 309 l~~~~~~~~~~-~---~~---~i~~~yG~tE~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~G~~~ 365 (567)
+++++.+.+.+ + |+ .+++.||+||++..++........ ...+..........+|.|+
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~ 408 (612)
T PRK12476 329 VSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVA 408 (612)
T ss_pred CCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcC
Confidence 99999999874 4 43 489999999987554432111000 0000000001124679999
Q ss_pred eeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-------------------CCcccCCceEE
Q 038104 366 LTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-------------------NGWFRTGDVGV 426 (567)
Q Consensus 366 ~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------~~~~~TGD~~~ 426 (567)
++. +++|+|.+++.+++.+ +.|||+++|++++.||+++++.+.+.|. ++||+|||+|+
T Consensus 409 ~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~ 485 (612)
T PRK12476 409 RSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGV 485 (612)
T ss_pred CCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccce
Confidence 998 9999998668888887 8899999999999999999999988874 25999999999
Q ss_pred EecCCcEEEEccCCceeeeCceeechHHHHHHHHc-CCCceE--EEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHH
Q 038104 427 IHPDGYLEIKDRSKDVIISGGENISSVELENVLFR-HPRVLE--AAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEAD 503 (567)
Q Consensus 427 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~ 503 (567)
++ +|++++.||++|+|+++|++|+|.+||++|.+ +|.|.+ +++++++++. +++++++++..++.. ..+.++
T Consensus 486 ~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~----~~~~~~ 559 (612)
T PRK12476 486 YL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTS----RADPAP 559 (612)
T ss_pred eE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcc----cccHHH
Confidence 85 99999999999999999999999999999985 799999 7778888877 888999988876531 346788
Q ss_pred HHHHHHhhCC-CCcc-ccEEEEeC--CCCCCCCCccchHHHHHHHHhh
Q 038104 504 ILSYCRENLS-RFMV-PKKVVILP--ELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 504 l~~~~~~~l~-~~~~-p~~i~~v~--~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
|.+++++.+. .|++ |..+++++ +||+|++||++|++|++++.+.
T Consensus 560 l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~ 607 (612)
T PRK12476 560 AIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDG 607 (612)
T ss_pred HHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcC
Confidence 8889988877 4777 67888887 5999999999999999988664
No 73
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.4e-65 Score=551.43 Aligned_cols=492 Identities=17% Similarity=0.256 Sum_probs=396.4
Q ss_pred CCCCHHHHHHHHHHHcCC-ceEEEeCC-eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 12 VPLSPLTFLKRAAAVYGN-RTSIIYEG-ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~-~~a~~~~~-~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
+..|+.++|.+.++++|+ ++|+.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 457999999999999998 68887643 7899999999999999999987 59999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHH--HHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHH-
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAR--EALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQF- 166 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~- 166 (567)
+++|+++.++.+++.++++.+++++++++.+..+... ...... ....++.+++.... ..+...
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~-------~~~~~~~ 346 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQL-------TQVRWVYLEDLKDD-------VTTADKL 346 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhh-------ccccEEEhhhhhhh-------cchhHHH
Confidence 9999999999999999999999999999877543211 000000 11122222221000 011110
Q ss_pred --HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HH
Q 038104 167 --VQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TW 243 (567)
Q Consensus 167 --~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~ 243 (567)
...............++++++++|||||||.||+|.++|+++..........+++.++|++++.+|++|.+++.. ++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~ 426 (718)
T PRK08043 347 WIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLF 426 (718)
T ss_pred HHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHH
Confidence 000000001111245689999999999999999999999999888877777778999999999999999999865 67
Q ss_pred HHHhhCceeeeeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhC
Q 038104 244 GVAARGGTNVCLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLG 321 (567)
Q Consensus 244 ~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~ 321 (567)
.++..|+++++.+. +++..+++.+.++++|.+.++|+++..+.+.. ....++++|.+++||+++++++.+.++ .++
T Consensus 427 ~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g 504 (718)
T PRK08043 427 TPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFG 504 (718)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcC
Confidence 78889999988765 56778899999999999999999998886642 234678999999999999999999988 579
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK 401 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 401 (567)
+++++.||+||+++.++.... . .....++|+|+++. ++++++.+.. + +.|||+++|++++.
T Consensus 505 ~~l~~~YG~TE~~~~~~~~~~---------~--~~~~~svG~p~pg~-~~~i~d~~~~-----~--~~Gel~v~g~~v~~ 565 (718)
T PRK08043 505 LRILEGYGVTECAPVVSINVP---------M--AAKPGTVGRILPGM-DARLLSVPGI-----E--QGGRLQLKGPNIMN 565 (718)
T ss_pred CCeecccCcccccceEEecCC---------c--ccCCCCCCCcCCCC-eeEEecCCCC-----C--CceEEEEecCCccc
Confidence 999999999999866543210 0 11246789999998 8888875321 2 45999999999999
Q ss_pred hccCC--hhh-------hhh-cccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEE
Q 038104 402 GYLKN--EEA-------TSQ-SFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVV 471 (567)
Q Consensus 402 gy~~~--~~~-------~~~-~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 471 (567)
||+++ ++. +.+ .+.+|||+|||+|++|+||++++.||.+|+|+++|++|+|.+||+++.+++.+.+++|+
T Consensus 566 GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv 645 (718)
T PRK08043 566 GYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATA 645 (718)
T ss_pred cccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEE
Confidence 99983 442 221 23479999999999999999999999999999999999999999999999988899999
Q ss_pred eecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 472 AMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 472 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+.+++..|+.+++++. +. ..+.++++++++++ ++.|++|..++++++||+|++||++|++|++++.+.
T Consensus 646 ~~~~~~~ge~~v~~~~---~~-----~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 646 IKSDASKGEALVLFTT---DS-----ELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred EccCCCCCceEEEEEc---Cc-----ccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhcc
Confidence 9999888888877763 22 45778899999987 999999999999999999999999999999887664
No 74
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.2e-64 Score=532.39 Aligned_cols=504 Identities=24% Similarity=0.344 Sum_probs=412.4
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLR-SLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~-~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.++.++|.+.++.+|+++|+++.++++||+||.+++.++|+.|. +.|+++||+|+++++|+++++++++||+++|++++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVV 104 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEe
Confidence 47889999999999999999999999999999999999999997 68999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCC--------------------C
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDID--------------------S 152 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~--------------------~ 152 (567)
+++|.++.+++.++++.+++++++++......+.++.... ....++..+... .
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT-------PVKQVITTGLGDMLGFPKAALVNFVVKYVKKLV 177 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC-------CccEEEEechhhhcccccchhhhhhhhhhhccc
Confidence 9999999999999999999999999988766665554322 112222211000 0
Q ss_pred CCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc----CCCC-CEE
Q 038104 153 PTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE----MGSA-PVY 227 (567)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~----~~~~-d~~ 227 (567)
..........+.+..........+......+++++++|||||||.||+|.++|.++..........+. +..+ +++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08751 178 PEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVV 257 (560)
T ss_pred cccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceE
Confidence 00011122334444433322222223356689999999999999999999999999877665544332 3343 567
Q ss_pred EEecchHhhhhHHH-HHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEc
Q 038104 228 LWSLPMFHCNGWTF-TWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTG 305 (567)
Q Consensus 228 ~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~ 305 (567)
+...|++|.+++.. .+..+..|++.++.. ..++..+++.++++++|++.++|.++..+.+........++++|.+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~g 337 (560)
T PRK08751 258 ITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGG 337 (560)
T ss_pred EEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeC
Confidence 78899999999864 455666777776654 5688999999999999999999999999988655455567899999999
Q ss_pred CCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCC
Q 038104 306 GAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPR 384 (567)
Q Consensus 306 g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~ 384 (567)
|+++++.+.+.++ .+++++++.||+||+++.++.+.... ......+|.|.++. .+++.+. .+..++.
T Consensus 338 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~ 405 (560)
T PRK08751 338 GMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDD-AGTVLAI 405 (560)
T ss_pred CCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECC-CCCCCCC
Confidence 9999999999998 45899999999999987665432110 11224679999887 8899985 6677777
Q ss_pred CCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC
Q 038104 385 DGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP 463 (567)
Q Consensus 385 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 463 (567)
+ +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||..|.+++
T Consensus 406 g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~ 483 (560)
T PRK08751 406 G--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMP 483 (560)
T ss_pred C--CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCc
Confidence 6 7899999999999999999999988875 799999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 464 RVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 464 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+|.+++|++++++..|+.+.++++.... ..+.++++++++++++.|++|..++++++||+|.+||++|+.|++.
T Consensus 484 ~v~~~~v~~~~~~~~ge~~~~~v~~~~~------~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 484 GVLEVAAVGVPDEKSGEIVKVVIVKKDP------ALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred CeeeeEEEecCCCCCCceEEEEEEcCCC------CCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 9999999999998888877777765422 4567899999999999999999999999999999999999999876
Q ss_pred H
Q 038104 544 A 544 (567)
Q Consensus 544 ~ 544 (567)
.
T Consensus 558 ~ 558 (560)
T PRK08751 558 A 558 (560)
T ss_pred h
Confidence 3
No 75
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-64 Score=530.11 Aligned_cols=504 Identities=26% Similarity=0.378 Sum_probs=413.6
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.|+.++|.++++++|+++|+++.+..+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v 101 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVV 101 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCC-------------------C
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDS-------------------P 153 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-------------------~ 153 (567)
|++|..+.+++.++++.+++++++++......+.+..... ....++....... .
T Consensus 102 ~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (557)
T PRK07059 102 NVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT-------AVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVP 174 (557)
T ss_pred ccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc-------CCceeEEeccccccccccccccccccccccccc
Confidence 9999999999999999999999999887665555443321 1222222211000 0
Q ss_pred CCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc----cCC---CCCE
Q 038104 154 TGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW----EMG---SAPV 226 (567)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~----~~~---~~d~ 226 (567)
.....+...+.++...............++++++++|||||||.||+|.++|.+++.++....... ... ..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 175 AWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred ccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 001122344555544333222222335678999999999999999999999999876654332211 111 2346
Q ss_pred EEEecchHhhhhHHH-HHHHHhhCceeeeeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEE
Q 038104 227 YLWSLPMFHCNGWTF-TWGVAARGGTNVCLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILT 304 (567)
Q Consensus 227 ~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~ 304 (567)
++..+|++|.+++.. .+.++..|++.++.+. .++..+++.++++++|.+.++|.++..+..........+++++.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 778899999988753 5667778888777764 47889999999999999999999999998876555556789999999
Q ss_pred cCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcC
Q 038104 305 GGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVP 383 (567)
Q Consensus 305 ~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 383 (567)
||+++++.+.+.+. .+++++++.||+||++.++..+... .......+|.|+++. .+++++. .+..++
T Consensus 335 gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~-~~~~~~ 402 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVD----------ATEFSGTIGLPLPST-EVSIRDD-DGNDLP 402 (557)
T ss_pred ccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCC----------CCCcCCcccCccCCc-EEEEECC-CCCCCC
Confidence 99999999999888 5699999999999998776543211 111235789999988 8999886 567777
Q ss_pred CCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcC
Q 038104 384 RDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRH 462 (567)
Q Consensus 384 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 462 (567)
.+ +.|||+++|+.++.||+++++.+...|. +|||+|||+++++++|.+++.||.+|+++++|.+|+|.+||+++.++
T Consensus 403 ~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 403 LG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred CC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhC
Confidence 77 7899999999999999999999988774 79999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 463 PRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 463 ~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
++|.+++|++++++..|+.++++++.... ..+.+++++++.+.++.|++|..+.+++++|+|.+||++|+.|++
T Consensus 481 ~~V~~~~v~~~~~~~~ge~~~~~v~~~~~------~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~ 554 (557)
T PRK07059 481 PGVLEVAAVGVPDEHSGEAVKLFVVKKDP------ALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRD 554 (557)
T ss_pred CceeEEEEEecccCCCCeeEEEEEEeCCC------CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHh
Confidence 99999999999998888888888876532 356789999999999999999999999999999999999999986
Q ss_pred H
Q 038104 543 L 543 (567)
Q Consensus 543 ~ 543 (567)
+
T Consensus 555 ~ 555 (557)
T PRK07059 555 G 555 (557)
T ss_pred h
Confidence 5
No 76
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.4e-63 Score=525.93 Aligned_cols=507 Identities=24% Similarity=0.357 Sum_probs=411.4
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
+-++-|+.++|+++++.+|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 17 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 96 (541)
T TIGR03205 17 TIARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGA 96 (541)
T ss_pred CCCCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCe
Confidence 33466999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccc--hHHHHHHhhhhhccccCCCCCeEEEEeCCCCC--------CCccCC
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQY--VQLAREALKLYFVEDRDAAGPRVILIDDIDSP--------TGIRFG 159 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--------~~~~~~ 159 (567)
+++|++|..+.+++.++++.+++++++++... .....+..... ....++..+..... ......
T Consensus 97 ~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (541)
T TIGR03205 97 RVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKG-------LLDRLIVCEDDNWGKVGTPQAPIPADPR 169 (541)
T ss_pred EEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcc-------cceEEEEecccccccccccccccCCCcc
Confidence 99999999999999999999999999997632 11122211100 12233333321100 001122
Q ss_pred cccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh-----hccCCCCCEEEEecchH
Q 038104 160 EFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL-----GWEMGSAPVYLWSLPMF 234 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~-----~~~~~~~d~~~~~~p~~ 234 (567)
...+.++......... .....++++++++|||||||.||+|.++|+++......... .......+++++..|++
T Consensus 170 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 248 (541)
T TIGR03205 170 IVTYADFVKGAAAPAE-WPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLF 248 (541)
T ss_pred cccHHHHHhcCCCCCC-CCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHH
Confidence 3456665543222211 12345679999999999999999999999998654332111 11223457899999999
Q ss_pred hhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHH
Q 038104 235 HCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASL 313 (567)
Q Consensus 235 ~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~ 313 (567)
|.+++.. ++.++..|+++++....++..+++.|.++++|++.++|+++..|++........+++++.+++||+++++++
T Consensus 249 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~ 328 (541)
T TIGR03205 249 HIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEV 328 (541)
T ss_pred HHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHH
Confidence 9988765 566778888888887889999999999999999999999999998754334456779999999999999999
Q ss_pred HHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeC-CCCCCcCCCCcceeE
Q 038104 314 LEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNL-DTMSSVPRDGKTMGE 391 (567)
Q Consensus 314 ~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~-~~~~~~~~~~~~~Ge 391 (567)
.+++. .++.++++.||+||++..++.+.... ......+|.++++. .+++.+. +.+.+++.+ +.||
T Consensus 329 ~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Ge 395 (541)
T TIGR03205 329 ANFFERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGE 395 (541)
T ss_pred HHHHHHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeE
Confidence 99887 46899999999999987766542110 11224678888887 7777653 455666666 7899
Q ss_pred EEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEE
Q 038104 392 IVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVV 471 (567)
Q Consensus 392 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 471 (567)
|+++|++++.||+++++.+.+.|.++||+|||+++++++|.+++.||.+|+|+.+|++++|.+||.++.++++|.+++|+
T Consensus 396 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~ 475 (541)
T TIGR03205 396 LRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVI 475 (541)
T ss_pred EEEecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 472 AMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 472 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
+++++..++.++++++..++.. ..+.+++.++++++++.|++|+.++++++||+|.+||++|++|+
T Consensus 476 ~~~~~~~~~~~~~~v~~~~~~~----~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 476 GIPDQYRGEAAKAFVKLRPGAK----PFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ecCCcccCceEEEEEEECCCCC----cCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9998888888999988875531 24678999999999999999999999999999999999999874
No 77
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-64 Score=528.15 Aligned_cols=481 Identities=24% Similarity=0.316 Sum_probs=403.4
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.+.++.++.+.+.+.++++|+++|+.+.+..+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 30 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G 109 (516)
T PRK13383 30 ASRGGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLG 109 (516)
T ss_pred HhhcCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 33478999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++|+++.++.+++.++++.++++.+++++.....+.... ..++.++.... .. ..
T Consensus 110 ~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------------~~~~~~~~~~~---------~~---~~ 165 (516)
T PRK13383 110 ADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD------------DAVAVIDPATA---------GA---EE 165 (516)
T ss_pred eEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh------------cceEEeccchh---------hh---hc
Confidence 99999999999999999999999999999887655443321 12222221100 00 00
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHH--HHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHH
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAY--LSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVA 246 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~--~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 246 (567)
.. . .+...++.++++|||||||.||+|.++|.... .........+++..+|+++..+|++|.+|+...+.++
T Consensus 166 -~~--~---~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l 239 (516)
T PRK13383 166 -SG--G---RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTI 239 (516)
T ss_pred -CC--C---CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHH
Confidence 00 0 01223466789999999999999999997432 1122233456788999999999999999998888888
Q ss_pred hhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhCCe
Q 038104 247 ARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLGFH 323 (567)
Q Consensus 247 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 323 (567)
..|+++++...+++..+++.++++++|.+.++|.++..+...... ....+++++.+++||+++++++++.+. .++..
T Consensus 240 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~ 319 (516)
T PRK13383 240 ALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDI 319 (516)
T ss_pred hcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCch
Confidence 999999988889999999999999999999999999999875432 123567899999999999999999988 57899
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||++..+..+.. ........+|.|+++. .+++.|. ++.+++.+ +.|||+++|+.++.||
T Consensus 320 v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~~Y 385 (516)
T PRK13383 320 LYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGELAGTRY 385 (516)
T ss_pred hhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecCcccccc
Confidence 9999999999865543221 1112235689999988 8999985 56677766 7899999999999999
Q ss_pred cCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCcee
Q 038104 404 LKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPC 483 (567)
Q Consensus 404 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 483 (567)
++.+. ..+.+|||+|||+|+++++|++++.||.+|+++++|.+|+|.+||+.|.++|+|.+++++++++...|+.+.
T Consensus 386 ~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~ 462 (516)
T PRK13383 386 TDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLA 462 (516)
T ss_pred cCCch---hheecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEE
Confidence 98764 334689999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred EEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 484 AFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 484 ~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
++|+..++. ..+.++++++++++++.|++|..++++++||+|.+||++|+.|+
T Consensus 463 ~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 463 AFVVLHPGS-----GVDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EEEEECCCC-----CCCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999887654 45678999999999999999999999999999999999999873
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.9e-64 Score=579.10 Aligned_cols=517 Identities=21% Similarity=0.289 Sum_probs=425.5
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeC-CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYE-GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~-~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
....|+.+++.+.++++|+++|+++. ++++||+||.++++++|++|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 34568999999999999999999974 5899999999999999999987 489999999999999999999999999999
Q ss_pred eeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhc
Q 038104 90 VLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQM 169 (567)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 169 (567)
+++|+++..+.+++.+++++++++.++++++..+.+.+....... .....++..++..... .....+.+....
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 763 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL----PENVKVIYLEDLKAKI---SKVDKLTALLAA 763 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc----ccCceEEEeehhcccc---chhHHHHHHHHh
Confidence 999999999999999999999999999998766655421100000 0223444444321110 011122222211
Q ss_pred CC-CCC--CC--CCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HH
Q 038104 170 GD-PRF--LP--EEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TW 243 (567)
Q Consensus 170 ~~-~~~--~~--~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~ 243 (567)
.. +.. .+ .....++++++++|||||||.||+|.++|+++..+.......+++.++|+++..+|++|.+|+.. .+
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 843 (1146)
T PRK08633 764 RLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLW 843 (1146)
T ss_pred ccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHH
Confidence 10 000 00 12356789999999999999999999999999988888777888999999999999999999876 77
Q ss_pred HHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhC
Q 038104 244 GVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLG 321 (567)
Q Consensus 244 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~ 321 (567)
.++..|+++++.+ ..++..+++.++++++|++.++|++++.+.+........++++|.+++||+++++++.+.++ .++
T Consensus 844 ~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g 923 (1146)
T PRK08633 844 LPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFG 923 (1146)
T ss_pred HHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhC
Confidence 8888999988876 46899999999999999999999999999886655566788999999999999999999998 569
Q ss_pred CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch
Q 038104 322 FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK 401 (567)
Q Consensus 322 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 401 (567)
+++++.||+||++++++.+......... .........++|.|.++. +++++|.+++.+++.+ +.|||+++|++++.
T Consensus 924 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~g~~~~~ 999 (1146)
T PRK08633 924 IRILEGYGATETSPVASVNLPDVLAADF-KRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIGGPQVMK 999 (1146)
T ss_pred CCeecccccccCcceEEEecCccccccc-ccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEcCCCccc
Confidence 9999999999998776543211100000 001112345789999998 9999998888888887 88999999999999
Q ss_pred hccCChhhhhhcccC----CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC--CceEEEEEeecC
Q 038104 402 GYLKNEEATSQSFKN----GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP--RVLEAAVVAMPH 475 (567)
Q Consensus 402 gy~~~~~~~~~~~~~----~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~--~v~~~~v~~~~~ 475 (567)
||+++++.+.+.+.+ |||+|||+|++|+||.+++.||.||++|++|++|+|.+||++|.++| .+.+++|+++++
T Consensus 1000 gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~ 1079 (1146)
T PRK08633 1000 GYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPD 1079 (1146)
T ss_pred cccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccC
Confidence 999999999998877 99999999999999999999999999999999999999999999998 467899999999
Q ss_pred CCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHh-hCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 476 PQWGESPCAFISVKTNSAGKTDDVNEADILSYCRE-NLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 476 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+..|++++++++.. ..+.+++++++.+ .++.|++|..+++++++|+|++||++|++|++...++
T Consensus 1080 ~~~g~~~~~~v~~~--------~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1080 EKKGEKLVVLHTCG--------AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred CCCCcEEEEEEecC--------ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 99999998888752 3467789988875 6999999999999999999999999999999987765
No 79
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.6e-64 Score=538.16 Aligned_cols=516 Identities=23% Similarity=0.299 Sum_probs=396.9
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeC----C-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHH
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYE----G-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHF 82 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (567)
.-.|+.++|.+.++++|+++|+.+. + ..+||+|+.++++++|.+|.+.|+++||+|+|+++|+++|+++++
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3458999999999999999999642 1 247999999999999999999999999999999999999999999
Q ss_pred HhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchH-HHHHHhhhhhccccCCCCCeEEEEeCCCCCC-----Cc
Q 038104 83 AVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQ-LAREALKLYFVEDRDAAGPRVILIDDIDSPT-----GI 156 (567)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~~ 156 (567)
||+++|++++|+++.++.+++.++++.++++++|++..... .+........ ....++.++...... ..
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~------~l~~ii~~~~~~~~~~~~~~~~ 193 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK------RLKAIVSFTSVTEEESDKASQI 193 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC------CceEEEEECCCChHHhhhhhcC
Confidence 99999999999999999999999999999999999875332 2221111111 345566665322110 00
Q ss_pred cCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhh-----ccCCCCCEEEEec
Q 038104 157 RFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILG-----WEMGSAPVYLWSL 231 (567)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~-----~~~~~~d~~~~~~ 231 (567)
......|.++...+...........++++++++|||||||.||||+++|+++.......... ..+.++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~l 273 (660)
T PLN02430 194 GVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFL 273 (660)
T ss_pred CcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeC
Confidence 11235677776554332222223457899999999999999999999999998776554321 2467899999999
Q ss_pred chHhhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc-----c--------------
Q 038104 232 PMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE-----E-------------- 292 (567)
Q Consensus 232 p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-----~-------------- 292 (567)
|++|.++....+.++..|+++++... ++..+++.|.+++||++.++|.+++.+.+.... .
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 352 (660)
T PLN02430 274 PLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999998776667778888777643 778899999999999999999999887652100 0
Q ss_pred ------------c-------------ccC-CCceEEEEcCCCCCHHHHHHHHHhC-CeeeccccccccCCCccccccccc
Q 038104 293 ------------R-------------KEI-ASPVQILTGGAPPPASLLEEIELLG-FHVTHAYGLTEATGPALVCEWQSS 345 (567)
Q Consensus 293 ------------~-------------~~l-~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~yG~tE~~~~~~~~~~~~~ 345 (567)
. ..+ +++|.+++||+++++++.+.++.++ +.+++.||+||+++.++....
T Consensus 353 ~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~--- 429 (660)
T PLN02430 353 LAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFP--- 429 (660)
T ss_pred HHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeecc---
Confidence 0 001 5799999999999999988777665 689999999999876654321
Q ss_pred cCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceE
Q 038104 346 WNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVG 425 (567)
Q Consensus 346 ~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~ 425 (567)
........+|.|.++. ++++.+.+.....+.+++..|||+++|++++.||+++++.|.+.|.+|||+|||+|
T Consensus 430 -------~~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig 501 (660)
T PLN02430 430 -------DEMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIG 501 (660)
T ss_pred -------ccCCCCCCccCCCCce-EEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceE
Confidence 0111235789999988 88888743322223333357999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCC-----CCCCC
Q 038104 426 VIHPDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAG-----KTDDV 499 (567)
Q Consensus 426 ~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-----~~~~~ 499 (567)
++|+||++++.||.+|+|+ .+|++|+|.+||.++.++|.|.+++|++.. .++.++|+|++.+.... .+...
T Consensus 502 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~ 578 (660)
T PLN02430 502 EILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGFTG 578 (660)
T ss_pred EECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCCCC
Confidence 9999999999999999999 579999999999999999999999999842 35678888887643100 00000
Q ss_pred C----------HHHHHHHHH-----hhCCCCccccEEEEeCC-C-----CCCCCCccchHHHHHHHHhhh
Q 038104 500 N----------EADILSYCR-----ENLSRFMVPKKVVILPE-L-----PKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 500 ~----------~~~l~~~~~-----~~l~~~~~p~~i~~v~~-~-----P~t~~GKv~r~~l~~~~~~~~ 548 (567)
+ .+.+.+.++ +.|+.|.+++++.+.++ | .+|+++|++|+.+.+.|++..
T Consensus 579 ~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 579 SFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 1 122223222 35999999999998763 3 489999999999999998854
No 80
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.9e-64 Score=584.65 Aligned_cols=520 Identities=19% Similarity=0.163 Sum_probs=406.2
Q ss_pred CCCHHHHHHHHHHHcCCceEEEe---------CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHH
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIY---------EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFA 83 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA 83 (567)
+-++.++|+++++.+|+++|+++ .++++||+||.++++++|++|.+.|+++||+|+|+++|+++++++++|
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 35799999999999999999986 347899999999999999999999999999999999999999999999
Q ss_pred hhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccc---hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCc
Q 038104 84 VPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY---VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGE 160 (567)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 160 (567)
|+++|++++|++|.++.+++.++++.+++++++++... ...+........... ...+.+. +.+....... ...
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~-~~~ 390 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELR--TEIPALA-LQDDGSLVGG-SLE 390 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccc--cccceEE-eccccccccc-ccc
Confidence 99999999999999999999999999999999987642 112221111100000 0111121 1111000000 000
Q ss_pred ccHHHHHhcCC--CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhh
Q 038104 161 FEYEQFVQMGD--PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 161 ~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 238 (567)
....+...... ..........++++++++|||||||.||||+++|+++..........+++.++|+++...|++|..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~ 470 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPI 470 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecch
Confidence 00000000000 0001111245689999999999999999999999999988888878888999999999999999988
Q ss_pred HHHHHHHHhhCceeeeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHH
Q 038104 239 WTFTWGVAARGGTNVCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLE 315 (567)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~ 315 (567)
+..++.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|.... ...+++++.+++||+++++...+
T Consensus 471 ~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~ 547 (1389)
T TIGR03443 471 QRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCL 547 (1389)
T ss_pred HHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHH
Confidence 8889999999999988764 36788999999999999999999999987543 24578999999999999999998
Q ss_pred HHHHh--CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCC-CCCcCCCCcceeEE
Q 038104 316 EIELL--GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDT-MSSVPRDGKTMGEI 392 (567)
Q Consensus 316 ~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~-~~~~~~~~~~~Gel 392 (567)
.+..+ ++++++.||+||++..++......................+|.|+++. .+.|+|.+. ..+++.| +.|||
T Consensus 548 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G--~~GEL 624 (1389)
T TIGR03443 548 RLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG--EVGEI 624 (1389)
T ss_pred HHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC--CceEE
Confidence 88754 789999999999987665433211100000000011224579999887 888988643 4567776 88999
Q ss_pred EEecCccchhccCChhhhhhccc-----------------------------CCcccCCceEEEecCCcEEEEccCCcee
Q 038104 393 VLRGSSIMKGYLKNEEATSQSFK-----------------------------NGWFRTGDVGVIHPDGYLEIKDRSKDVI 443 (567)
Q Consensus 393 ~v~~~~~~~gy~~~~~~~~~~~~-----------------------------~~~~~TGD~~~~~~~g~l~~~GR~~d~i 443 (567)
+++|++++.||+++|+.|.++|. ++||+|||+|++++||.+++.||.||+|
T Consensus 625 ~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~I 704 (1389)
T TIGR03443 625 YVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQV 704 (1389)
T ss_pred EecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEE
Confidence 99999999999999999998872 4799999999999999999999999999
Q ss_pred eeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCC---------------------CCCCHH
Q 038104 444 ISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKT---------------------DDVNEA 502 (567)
Q Consensus 444 ~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~---------------------~~~~~~ 502 (567)
|++|++|+|.+||.+|.++|.|.+++|++.+++..+..++++++...+..... .....+
T Consensus 705 ki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1389)
T TIGR03443 705 KIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIK 784 (1389)
T ss_pred EeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHH
Confidence 99999999999999999999999999999888877888999988652211000 001246
Q ss_pred HHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 503 DILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 503 ~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
+++++++++|+.|++|..++++++||+|++||++|++|++
T Consensus 785 ~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 785 DIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred HHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 7999999999999999999999999999999999999964
No 81
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-64 Score=530.08 Aligned_cols=488 Identities=21% Similarity=0.284 Sum_probs=381.1
Q ss_pred CC-HHHHHHHHHHHcCCceEEEeCC----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 14 LS-PLTFLKRAAAVYGNRTSIIYEG----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 14 ~t-l~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
|| +.+.|+++++++|+++|+++.+ +++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 44 7889999999999999999976 7899999999999999999987 899999999999999999999999999
Q ss_pred ceeeeccCC--------CChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCc
Q 038104 89 AVLNTINVR--------LDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGE 160 (567)
Q Consensus 89 ~~~v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 160 (567)
+++++ ++. ...+++.++++.++++++|++......+.+... . + .+.+..
T Consensus 79 ~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---------~---~-~~~~~~--------- 135 (525)
T PRK05851 79 AAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS---------S---V-TVHDLA--------- 135 (525)
T ss_pred CCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc---------c---c-cccccc---------
Confidence 98653 332 223556678999999999998776554433211 0 0 010000
Q ss_pred ccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCC-CCCEEEEecchHhhhhH
Q 038104 161 FEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMG-SAPVYLWSLPMFHCNGW 239 (567)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~-~~d~~~~~~p~~~~~g~ 239 (567)
......... +.....++++++++|||||||.||+|.++|+++...+......+++. ++|+++..+|++|.+|+
T Consensus 136 ----~~~~~~~~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 209 (525)
T PRK05851 136 ----TAAHTNRSA--SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGL 209 (525)
T ss_pred ----ccccccccc--cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccH
Confidence 000000000 00123567999999999999999999999999998888877778888 89999999999999999
Q ss_pred HHHHHHHhhCceeeeeCC--C--CHHHHHHHHHhcCcceeecchHHHHHHHhcCC-cccccCCCceEEEEcCCCCCHHHH
Q 038104 240 TFTWGVAARGGTNVCLRN--T--TAYDMYRNISQHRVTHMCCAPIVFNILLQAKP-EERKEIASPVQILTGGAPPPASLL 314 (567)
Q Consensus 240 ~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-~~~~~l~~l~~~~~~g~~l~~~~~ 314 (567)
..++.+++.|+++++.+. + ++..+++.++++++|++...|.++..+..... .....++++|.+++||+++++++.
T Consensus 210 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~ 289 (525)
T PRK05851 210 AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGF 289 (525)
T ss_pred HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHH
Confidence 888889999999988763 3 57789999999999988655554544433221 123457899999999999999998
Q ss_pred HHHHH----hCC---eeeccccccccCCCcccccccccc--CCC--CCchhhhhccccCceeeeecceEEeeCCCCCCcC
Q 038104 315 EEIEL----LGF---HVTHAYGLTEATGPALVCEWQSSW--NQL--PKPDQAKLKARQGISILTLADVDVKNLDTMSSVP 383 (567)
Q Consensus 315 ~~~~~----~~~---~i~~~yG~tE~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 383 (567)
+.+.+ ++. ++++.||+||++..++........ ... +..........+|.|+++. .++|+|.+...+++
T Consensus 290 ~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~ 368 (525)
T PRK05851 290 ERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGAAGVA 368 (525)
T ss_pred HHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCCccCC
Confidence 88863 344 499999999997655432111000 000 0000112235689999998 99999876655677
Q ss_pred CCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC
Q 038104 384 RDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP 463 (567)
Q Consensus 384 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 463 (567)
.+ +.|||+++|++++.||+++++.+ .+|||+|||+|+++ +|.++++||.||+||++|++|+|.+||.+|.++|
T Consensus 369 ~g--~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p 441 (525)
T PRK05851 369 GR--EIGEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVR 441 (525)
T ss_pred CC--CeEEEEEecCchhhccccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCC
Confidence 76 88999999999999999998643 37899999999997 8999999999999999999999999999999999
Q ss_pred CceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCC--ccccEEEEeC--CCCCCCCCccchHH
Q 038104 464 RVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRF--MVPKKVVILP--ELPKTATGKIQKFQ 539 (567)
Q Consensus 464 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~v~--~~P~t~~GKv~r~~ 539 (567)
+|.+++|++++++..++.+.++|..... ..+.+++.++++++++.+ +.|..+++++ +||+|++||++|+.
T Consensus 442 ~V~~~~vv~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~ 515 (525)
T PRK05851 442 GVREGAVVAVGTGEGSARPGLVIAAEFR------GPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLA 515 (525)
T ss_pred CcccceEEEEEecCCCCceeEEEEEEec------CcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHH
Confidence 9999999999988888877777665421 234556777777777776 8999999998 89999999999999
Q ss_pred HHHHHHh
Q 038104 540 LRALAKN 546 (567)
Q Consensus 540 l~~~~~~ 546 (567)
|++.+.+
T Consensus 516 L~~~~~~ 522 (525)
T PRK05851 516 VKRSLEA 522 (525)
T ss_pred HHHHHHh
Confidence 9987754
No 82
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=6.3e-63 Score=517.30 Aligned_cols=496 Identities=24% Similarity=0.324 Sum_probs=414.1
Q ss_pred HHHHHHH-HHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeecc
Q 038104 17 LTFLKRA-AAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 17 ~~~l~~~-a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++++++ ++.+||++|+++.+..+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4566665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCC
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFL 175 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
+..+.+++.++++.+++++++++......+.+.....+ ....++..+... .....+.++........
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~- 153 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP------HLEHRVVVGRPE------AGEVQLAELLATESEQF- 153 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC------CccEEEEeCCCC------cccccHHHHhhcCCCcc-
Confidence 99999999999999999999999887766655543322 334454443321 11234444443322222
Q ss_pred CCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhH-hhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCceee
Q 038104 176 PEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLS-LILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTNV 253 (567)
Q Consensus 176 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~ 253 (567)
......++++++++|||||||.||+|.++|+++...+.. ....++++++|+++..+|++|..++.. ++.++..|++.+
T Consensus 154 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~ 233 (508)
T TIGR02262 154 KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTV 233 (508)
T ss_pred CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEE
Confidence 222345689999999999999999999999999876654 344568899999999999999998864 556677888888
Q ss_pred eeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeecccccc
Q 038104 254 CLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLT 331 (567)
Q Consensus 254 ~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~t 331 (567)
+.+. +++..+++.|+++++|.+.++|.++..++...........+++.++++|+++++++.+.|. .+++++++.||+|
T Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~t 313 (508)
T TIGR02262 234 LMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGST 313 (508)
T ss_pred EeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCcccc
Confidence 7764 5899999999999999999999999888765443334567899999999999999999998 5799999999999
Q ss_pred ccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhh
Q 038104 332 EATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATS 411 (567)
Q Consensus 332 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 411 (567)
|++++++.+... ......+|.|+++. .++++| +++.+++.+ +.|||+++|+.++.||+++++.+.
T Consensus 314 E~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d-~~~~~~~~g--~~Gel~i~~~~~~~gY~~~~~~~~ 378 (508)
T TIGR02262 314 EMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVG-DGGQDVAAG--EPGELLISGPSSATMYWNNRAKTR 378 (508)
T ss_pred ccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEEC-CCCCCCCCC--CeeEEEEecCccccccCCCHHHhH
Confidence 998765543211 01124678898887 899998 577778777 889999999999999999999999
Q ss_pred hcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecC
Q 038104 412 QSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTN 491 (567)
Q Consensus 412 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 491 (567)
..|.++||+|||+++++++|.+++.||.+|+++.+|.+++|.+||++|.++++|.++++++.++...++++.++++..++
T Consensus 379 ~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 458 (508)
T TIGR02262 379 DTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPG 458 (508)
T ss_pred hhhhcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998887777888888887654
Q ss_pred CCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHH
Q 038104 492 SAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 492 ~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
.. ......++++++++++++.+++|..++++++||+|++||++|+.|++
T Consensus 459 ~~--~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 459 QD--IDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred Cc--cccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 31 11345688999999999999999999999999999999999999875
No 83
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-62 Score=518.36 Aligned_cols=504 Identities=22% Similarity=0.288 Sum_probs=410.8
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
++|+.+++++.++++|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
++++.++.+++.++++.+++++++++......+.++..... ....++.+++..... ...+...+.++......
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP------KLRTLVVVEDGSGND-LLPGAVDYEDALAAGSP 154 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC------CccEEEEecCCcccc-cCCccccHHHHHhccCC
Confidence 99999999999999999999999999887776666543221 334555555432211 11234567777655432
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhh---------ccC------CCCCEEEEecchHhhh
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILG---------WEM------GSAPVYLWSLPMFHCN 237 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~---------~~~------~~~d~~~~~~p~~~~~ 237 (567)
.... . ....+.++++|||||||.||+|+++|+++.......... ..+ ..+++++..+|++|..
T Consensus 155 ~~~~-~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 155 ERDF-G-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred cCCC-C-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 2211 1 223355789999999999999999999987554332211 111 5678999999999999
Q ss_pred hHHHHHHHHhhCceeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHH-HHhcCC-cccccCCCceEEEEcCCCCCHHH
Q 038104 238 GWTFTWGVAARGGTNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNI-LLQAKP-EERKEIASPVQILTGGAPPPASL 313 (567)
Q Consensus 238 g~~~~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~-~~~~~l~~l~~~~~~g~~l~~~~ 313 (567)
++..++.+++.|+++++.+ .+++..+++.++++++|.+.++|..+.. +..... .....+++++.+++||+++++++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 233 GQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred hHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9988889999999999998 7899999999999999999999876543 333222 23456789999999999999999
Q ss_pred HHHHHH-h-CCeeeccccccccCCCccccccccccCCCCCchhhhhccccC--ceeeeecceEEeeCCCCCCcCCCCcce
Q 038104 314 LEEIEL-L-GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQG--ISILTLADVDVKNLDTMSSVPRDGKTM 389 (567)
Q Consensus 314 ~~~~~~-~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~i~~~~~~~~~~~~~~~~ 389 (567)
.+++.+ + +..+++.||+||++.+....... . ....| .+.++. .+++.+.+ +.+++.+....
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-------~------~~~~g~~~~~~~~-~~~i~~~~-~~~~~~g~~~~ 377 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVAK-------G------AVHTGGPRFTIGP-RTVVLDED-GNPVEPGSGEI 377 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCCC-------C------CccCCCCccCCCc-eEEEECCC-CCCCCCCCCCe
Confidence 999984 5 78999999999996554432110 0 01122 455555 78888864 45677663333
Q ss_pred eEEEEecCccchhccCChhhhhhccc----CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCc
Q 038104 390 GEIVLRGSSIMKGYLKNEEATSQSFK----NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRV 465 (567)
Q Consensus 390 Gel~v~~~~~~~gy~~~~~~~~~~~~----~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 465 (567)
|+++. ++.++.||+++++.+.+.|. ++||+|||+++++++|.+++.||.+|+++.+|.+|+|.+||+++.++|+|
T Consensus 378 g~l~~-~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v 456 (533)
T PRK07798 378 GWIAR-RGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDV 456 (533)
T ss_pred eEEEe-ecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccc
Confidence 77765 56799999999999988874 25999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 466 LEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 466 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
.+++|++.+++..|+.+.++++..++. ..+.++|++++++.++.|++|+.++++++||+|++||++|+.|+++.+
T Consensus 457 ~~~~v~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 457 ADALVVGVPDERWGQEVVAVVQLREGA-----RPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred eeEEEEeccCcccCceEEEEEEECCCC-----CCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhc
Confidence 999999999888888899988877654 467899999999999999999999999999999999999999999886
Q ss_pred h
Q 038104 546 N 546 (567)
Q Consensus 546 ~ 546 (567)
+
T Consensus 532 ~ 532 (533)
T PRK07798 532 E 532 (533)
T ss_pred c
Confidence 5
No 84
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3e-63 Score=529.22 Aligned_cols=504 Identities=17% Similarity=0.204 Sum_probs=393.4
Q ss_pred cccCCCCCHHHHHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHH
Q 038104 8 EANYVPLSPLTFLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHF 82 (567)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~l 82 (567)
++...+.|+.++|+++++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 33 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 33 PLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred CCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 345567899999999999999999998742 689999999999999999999999999999999999999999999
Q ss_pred HhhhccceeeeccCCCC-----hHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCcc
Q 038104 83 AVPMAEAVLNTINVRLD-----AKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIR 157 (567)
Q Consensus 83 A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~ 157 (567)
||+++|++++|+++.++ .+++.++++.++++++|++... .+...+..... ....++..+.... .
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~--~~~~~~~~~~~-----~~~~~i~~~~~~~----~ 181 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGA--AFARALAAVVP-----ADVEVVAVRGAVP----G 181 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHH--HHHHHHhhhcc-----CCceEEEecCCCC----C
Confidence 99999999999999988 7999999999999999997541 11111111110 1223333332110 0
Q ss_pred CCcccHHHHHhcCCCCC--CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCC--CCCEEEEecch
Q 038104 158 FGEFEYEQFVQMGDPRF--LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMG--SAPVYLWSLPM 233 (567)
Q Consensus 158 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~--~~d~~~~~~p~ 233 (567)
.....|.++........ .......++++++++|||||||.||+|.++|+++..+.......++.. ..+++++.+|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl 261 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPW 261 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecch
Confidence 11245666554322111 111124568999999999999999999999999988877766666553 56899999999
Q ss_pred HhhhhHHH-HHHHHhhCceeeeeCC-CCH---HHHHHHHHhcCcceeecchHHHHHHHhcCCc----ccccCCCceEEEE
Q 038104 234 FHCNGWTF-TWGVAARGGTNVCLRN-TTA---YDMYRNISQHRVTHMCCAPIVFNILLQAKPE----ERKEIASPVQILT 304 (567)
Q Consensus 234 ~~~~g~~~-~~~~~~~g~~~~~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~~~~l~~l~~~~~ 304 (567)
+|.+|+.. ++.++..|+++++.+. +++ ..+++.++++++|++.++|.++..|++.... ....++++|.+++
T Consensus 262 ~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~ 341 (614)
T PRK08180 262 NHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFY 341 (614)
T ss_pred HHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEE
Confidence 99998754 6677888999888753 343 4678899999999999999999999875322 1234689999999
Q ss_pred cCCCCCHHHHHHHHHh-----C--CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCC
Q 038104 305 GGAPPPASLLEEIELL-----G--FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLD 377 (567)
Q Consensus 305 ~g~~l~~~~~~~~~~~-----~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~ 377 (567)
||+++++++.+.+.+. + +++++.||+||++++++..... .....++|.|+++. ++++++.+
T Consensus 342 gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~i~d~~ 409 (614)
T PRK08180 342 AGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVKLVPVG 409 (614)
T ss_pred ccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEEEecCC
Confidence 9999999999988742 3 6899999999998766543211 11235789999998 88888641
Q ss_pred CCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEE----ecCCcEEEEccCCceee-eCceeec
Q 038104 378 TMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVI----HPDGYLEIKDRSKDVII-SGGENIS 451 (567)
Q Consensus 378 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~----~~~g~l~~~GR~~d~i~-~~G~~v~ 451 (567)
+.|||+++|++++.||+++|+.+.+.|. +|||+|||+|++ |++|.+++.||.+|+|+ .+|++++
T Consensus 410 ----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~ 479 (614)
T PRK08180 410 ----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVS 479 (614)
T ss_pred ----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEec
Confidence 4599999999999999999999999985 899999999999 46899999999999888 6898777
Q ss_pred --hHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCC--------C--CCCCCHHHHHHHHHhhCCCCc---
Q 038104 452 --SVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAG--------K--TDDVNEADILSYCRENLSRFM--- 516 (567)
Q Consensus 452 --~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~--------~--~~~~~~~~l~~~~~~~l~~~~--- 516 (567)
|.++|.++.++|.|.+++|++.+++. +.++|++.++... . ....+.++|++++++.+..|+
T Consensus 480 ~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 555 (614)
T PRK08180 480 VGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQA 555 (614)
T ss_pred chhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhc
Confidence 77888999999999999999998764 6688877644100 0 001244668888888777776
Q ss_pred -----cccEEEEeCCCCCC------CCCccchHHHHHHHHhhh
Q 038104 517 -----VPKKVVILPELPKT------ATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 517 -----~p~~i~~v~~~P~t------~~GKv~r~~l~~~~~~~~ 548 (567)
+|+++.+++++|++ ++||++|+.+.+.|++..
T Consensus 556 ~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i 598 (614)
T PRK08180 556 TGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALV 598 (614)
T ss_pred cccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHH
Confidence 89999999999876 466889999999998853
No 85
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-62 Score=516.37 Aligned_cols=506 Identities=25% Similarity=0.371 Sum_probs=411.5
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.++.++|+++++++|+++|+++.+.++||+||.++++++|.+|.+ +|+++||+|+++++|+++++++++||+++|++++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 479999999999999999999999999999999999999999984 8999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC------------------
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT------------------ 154 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------------------ 154 (567)
|++|..+.+++.++++.++++.++++.+....+.++.... ....++.........
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT-------PVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLV 175 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc-------CcceEEEecccccccccccccccchhhhccccc
Confidence 9999999999999999999999999877666555543321 112222211100000
Q ss_pred --CccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc---cCCCCCEEEE
Q 038104 155 --GIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW---EMGSAPVYLW 229 (567)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~---~~~~~d~~~~ 229 (567)
........+.+.................+++++++|||||||.||+|.++|.++..+.......+ ....++.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 176 PKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred ccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 00001112222222221111111224568999999999999999999999999987655433322 2344678888
Q ss_pred ecchHhhhhHHH-HHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCC
Q 038104 230 SLPMFHCNGWTF-TWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGA 307 (567)
Q Consensus 230 ~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~ 307 (567)
.+|++|.+++.. .+..+..|++.++.. ..++..+++.++++++|.+.++|+++..|..........+++++.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 999999988754 556667888876654 467888999999999999999999999998776555566789999999999
Q ss_pred CCCHHHHHHHH-HhCCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCC
Q 038104 308 PPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDG 386 (567)
Q Consensus 308 ~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~ 386 (567)
++++.+.+.|+ .+++++++.||+||++..+..+.... ......+|.|.++. .+++++. ++.+++.+
T Consensus 336 ~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g- 402 (560)
T PRK08974 336 AVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG- 402 (560)
T ss_pred cCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECC-CCCCCCCC-
Confidence 99999999998 46899999999999987766553211 11234689999887 8899886 56777777
Q ss_pred cceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCce
Q 038104 387 KTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVL 466 (567)
Q Consensus 387 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 466 (567)
+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+++++|.+++|.+||++|.++++|.
T Consensus 403 -~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~ 481 (560)
T PRK08974 403 -EPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVL 481 (560)
T ss_pred -CceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCee
Confidence 7899999999999999999999998898999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 467 EAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 467 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+++|++.+++..|+.++++++..+. ..+.+++++++.+.++.|..|..+.++++||+|.+||++|+.|+++..+
T Consensus 482 ~~~v~~~~~~~~g~~~~~~v~~~~~------~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 482 EVAAVGVPSEVSGEAVKIFVVKKDP------SLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred EEEEEeeecCCcceEEEEEEECCCC------CCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHh
Confidence 9999999998888877777765432 3467889999999999999999999999999999999999999987765
No 86
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=8.9e-63 Score=516.05 Aligned_cols=491 Identities=21% Similarity=0.252 Sum_probs=405.3
Q ss_pred CHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeec
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTI 94 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (567)
++.+.+.+.|+.+|+++|+.+.+.++||+||.+++.++|..|.+.|+++||+|+++++|+.+++++++||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCC
Q 038104 95 NVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRF 174 (567)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++.++.+++.++++..+++.++++........ . ..++.++. ...+.....+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------------~-~~~~~~~~-------------~~~~~~~~~~-~ 132 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV-------------G-TQIITLSA-------------LEQAETSGGP-V 132 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc-------------C-CceEEchH-------------hhhhhhhcCC-c
Confidence 99999999999999999999999876432211 1 11222211 0111111111 1
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeee
Q 038104 175 LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVC 254 (567)
Q Consensus 175 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~ 254 (567)
........++.++++|||||||.||+|.++|+++..........+++..+++++...|++|..++..++.++..|+++++
T Consensus 133 ~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~ 212 (502)
T TIGR01734 133 SFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHC 212 (502)
T ss_pred cccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEE
Confidence 11122456789999999999999999999999998888877777888999999999999999998888899999999998
Q ss_pred eCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-Hh-CCeeecccc
Q 038104 255 LRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LL-GFHVTHAYG 329 (567)
Q Consensus 255 ~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~-~~~i~~~yG 329 (567)
.+. .++..+++.+.+++++.+.++|.++..++.........+++++.++++|++++++..+.+. .+ ++++++.||
T Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG 292 (502)
T TIGR01734 213 LDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYG 292 (502)
T ss_pred cCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCcc
Confidence 875 4788999999999999999999999887765544556788999999999999999999988 44 789999999
Q ss_pred ccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhh
Q 038104 330 LTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEA 409 (567)
Q Consensus 330 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 409 (567)
+||+++.+.......+ .........+|.+.++. +++|.+.+ +..++.+ +.|||+++|+.++.||+++++.
T Consensus 293 ~tE~~~~~~~~~~~~~------~~~~~~~~~vg~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~ 362 (502)
T TIGR01734 293 PTEATVAVTSVKITQE------ILDQYPRLPIGFAKPDM-NLFIMDEE-GEPLPEG--EKGEIVIVGPSVSKGYLNNPEK 362 (502)
T ss_pred CCcceEEEEEEEcccc------ccccCCccccccccCCC-EEEEECCC-CCCCCCC--CeeEEEEccccccccccCCccc
Confidence 9999754443221110 00111224689999887 89999874 5667766 8899999999999999999998
Q ss_pred hhhccc----CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeec-CCCCCCceeE
Q 038104 410 TSQSFK----NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMP-HPQWGESPCA 484 (567)
Q Consensus 410 ~~~~~~----~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~~~~g~~~~~ 484 (567)
+.+.|. .+||+|||+|+++++ ++++.||.+|+|+.+|++|+|.+||+++.++|+|.+++++++. ....++.+++
T Consensus 363 ~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~ 441 (502)
T TIGR01734 363 TAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIA 441 (502)
T ss_pred chHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEE
Confidence 887762 359999999999976 9999999999999999999999999999999999999999965 4445667888
Q ss_pred EEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 485 FISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 485 ~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
+|+....... .......++++.+++.++.|++|+.++++++||+|++||++|++|++++.
T Consensus 442 ~v~~~~~~~~-~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 442 AIVPETEDFE-KEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred EEEecccccc-cchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 8876654211 00122377899999999999999999999999999999999999999764
No 87
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=4.6e-64 Score=618.86 Aligned_cols=489 Identities=20% Similarity=0.267 Sum_probs=419.4
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.++.++|.++++++|+++|+++.++++||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|++|.++.+++.++++.+++++++++......+... ....++.++.... ....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~-----------~~~~~~~~~~~~~----------------~~~~ 3226 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP-----------AGDTALTLDRLDL----------------NGYS 3226 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc-----------cCCceeeecchhh----------------cccC
Confidence 999999999999999999999999987654432211 1122333332110 0111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
...+.....++++++++|||||||.||||+++|+++...+......++++++|+++...|++|..+...++.+++.|+++
T Consensus 3227 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l 3306 (3956)
T PRK12467 3227 ENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLICGGCL 3306 (3956)
T ss_pred CCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCCEE
Confidence 11122235678999999999999999999999999999998888889999999999999999999988899999999999
Q ss_pred eeeCC--CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeeccc
Q 038104 253 VCLRN--TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTHAY 328 (567)
Q Consensus 253 ~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~~y 328 (567)
++.+. .++..+++.|+++++|++.++|+++..+++.. ....++++|.+++|||++++++.+.|.. + ++++++.|
T Consensus 3307 ~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~--~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~Y 3384 (3956)
T PRK12467 3307 VVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA--GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGY 3384 (3956)
T ss_pred EECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCc
Confidence 98875 68999999999999999999999999997653 2346788999999999999999999984 4 67899999
Q ss_pred cccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh
Q 038104 329 GLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE 408 (567)
Q Consensus 329 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 408 (567)
|+||++..++......+ .........+|+|+++. .+.|.|. .+.++|.| +.|||+++|+.+++||+++|+
T Consensus 3385 G~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~v~~GY~~~~~ 3454 (3956)
T PRK12467 3385 GPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVGLARGYHQRPS 3454 (3956)
T ss_pred ccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEcchhhhhhccCCcc
Confidence 99999876665432110 00111235689999998 8999985 67888888 889999999999999999999
Q ss_pred hhhhccc-C-------CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 409 ATSQSFK-N-------GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 409 ~~~~~~~-~-------~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
.|.++|. + +||+|||+|++++||.+++.||+||+||++|++|+|.|||.+|.++|+|.+++|++.+. ..|+
T Consensus 3455 ~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~ 3533 (3956)
T PRK12467 3455 LTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGK 3533 (3956)
T ss_pred cchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC-CCCc
Confidence 9999984 2 37999999999999999999999999999999999999999999999999999998754 4578
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
+++++|+...+. ....++++++++++||.|++|..|+++++||+|++||++|++|.+....
T Consensus 3534 ~lva~v~~~~~~-----~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3534 QLVAYVVPADPQ-----GDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred EEEEEEeCCCCC-----cccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 899999876543 4567899999999999999999999999999999999999999875443
No 88
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.7e-63 Score=574.93 Aligned_cols=493 Identities=19% Similarity=0.217 Sum_probs=412.1
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.+++..++.++|.++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 453 ~~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G 532 (1296)
T PRK10252 453 VEIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAG 532 (1296)
T ss_pred CCCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 34566799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++|++|.++.+++.++++.+++++++++......+... ....++..+.. ..
T Consensus 533 ~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----------~~~~~~~~~~~----------------~~ 585 (1296)
T PRK10252 533 AAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----------PDLTSLCYNAP----------------LA 585 (1296)
T ss_pred CEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----------CCceeeecccc----------------cc
Confidence 9999999999999999999999999999987654433211 00111111110 00
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhh
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAAR 248 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 248 (567)
.. ...+.....++++++++|||||||.||||.++|+++.....+....+++.++|+++...|++|..++..++.+++.
T Consensus 586 ~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~ 663 (1296)
T PRK10252 586 PQ--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIA 663 (1296)
T ss_pred cc--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhC
Confidence 00 0011112356789999999999999999999999999988888888999999999999999999888888999999
Q ss_pred CceeeeeC---CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCccc--ccCCCceEEEEcCCCCCHHHHHHHHH-hCC
Q 038104 249 GGTNVCLR---NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEER--KEIASPVQILTGGAPPPASLLEEIEL-LGF 322 (567)
Q Consensus 249 g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~ 322 (567)
|+++++.+ ..++..+++.|+++++|++.++|+++..+++...... ..++++|.+++||+++++++.+.+.+ +++
T Consensus 664 G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~ 743 (1296)
T PRK10252 664 GAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTGA 743 (1296)
T ss_pred CCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCCC
Confidence 99999876 3588999999999999999999999999987643222 34678999999999999999999985 589
Q ss_pred eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchh
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKG 402 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 402 (567)
++++.||+||++..++......... .........+|.|+++. .+.|+|. .+.+++.| +.|||+++|+.++.|
T Consensus 744 ~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g~~~~~G 815 (1296)
T PRK10252 744 PLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTGIQLAQG 815 (1296)
T ss_pred EEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccchh
Confidence 9999999999986665543221100 00011234689999998 8889885 67788877 889999999999999
Q ss_pred ccCChhhhhhccc-------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeec-
Q 038104 403 YLKNEEATSQSFK-------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMP- 474 (567)
Q Consensus 403 y~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~- 474 (567)
|+++++.|.+.|. ++||+|||+|+++++|.++++||.|++||++|++|+|.+||.+|.++|+|.+++|+.+.
T Consensus 816 Y~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~ 895 (1296)
T PRK10252 816 YLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVI 895 (1296)
T ss_pred hCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEec
Confidence 9999999998884 34999999999999999999999999999999999999999999999999999887652
Q ss_pred ---CCCCC--CceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 475 ---HPQWG--ESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 475 ---~~~~g--~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+...| ..++++|+...+. ..+.++|+++++++|+.|++|..++.+++||+|++||++|++|.+.
T Consensus 896 ~~~~~~~~~~~~lva~v~~~~~~-----~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 896 NQAAATGGDARQLVGYLVSQSGL-----PLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred cccccCCCCccEEEEEEEcCCCC-----CCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 11123 3688888876553 4578899999999999999999999999999999999999999653
No 89
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-62 Score=514.91 Aligned_cols=484 Identities=26% Similarity=0.371 Sum_probs=388.8
Q ss_pred HHHHHHcCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC
Q 038104 21 KRAAAVYGNRTSIIYE--GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL 98 (567)
Q Consensus 21 ~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (567)
..+|+++|+++|+.+. +.++||+||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 3567889999999874 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCC
Q 038104 99 DAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEE 178 (567)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
+.+++.++++.++++.++++............ .....+.+.... .....+.+......+ .
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~- 143 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGA---------DLPLRLSFGGEI------DGFGSFEAALAGAGP----R- 143 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhh---------ccceEEEecCcc------cccccHHHHhcccCC----C-
Confidence 99999999999999999998765433222111 111122222110 011223332221111 0
Q ss_pred CCCCCCcEEEEeccCCCCCCceEEe--chHHHHHHhh---H-hhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 179 IHDEWDPITLNYTSGTTSAPKGVVY--SHRGAYLSTL---S-LILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 179 ~~~~~~~a~i~~TSGtTG~pK~v~~--~~~~l~~~~~---~-~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
....+++++++|||||||.||+|.+ +|.++..... . ....+.+..+|+++..+|++|.+++...+..+..|+++
T Consensus 144 ~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~ 223 (501)
T PRK13390 144 LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTV 223 (501)
T ss_pred CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHhcCceE
Confidence 1122357999999999999999995 4544433211 1 12345788899999999999999876655566789999
Q ss_pred eeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeecccc
Q 038104 253 VCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYG 329 (567)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG 329 (567)
++.+.+++..+++.|+++++|.+.++|+++..+...... ....+++++.+++||+++++++.+.+. .++.++++.||
T Consensus 224 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG 303 (501)
T PRK13390 224 VLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYS 303 (501)
T ss_pred EEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeec
Confidence 888888999999999999999999999999999875432 234567999999999999999999988 46889999999
Q ss_pred ccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhh
Q 038104 330 LTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEA 409 (567)
Q Consensus 330 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 409 (567)
+||+++++.... .........+|.|.++ .++++|. ++.+++.| +.|||+++|++++.||+++++.
T Consensus 304 ~tE~~~~~~~~~----------~~~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~ 368 (501)
T PRK13390 304 STEAHGMTFIDS----------PDWLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFRYLNDPEK 368 (501)
T ss_pred ccccCceEEecc----------hhhccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCccccccCChhh
Confidence 999986544321 0111123467888887 4788875 56777776 8899999999999999999999
Q ss_pred hhhccc---CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEE
Q 038104 410 TSQSFK---NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFI 486 (567)
Q Consensus 410 ~~~~~~---~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 486 (567)
+.+.+. ++|++|||+|+++++|.+++.||.||+++.+|.+|+|.+||++|.++|+|.+++|++++++..|+++++++
T Consensus 369 t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v 448 (501)
T PRK13390 369 TAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVI 448 (501)
T ss_pred hHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEE
Confidence 988764 57999999999999999999999999999999999999999999999999999999999998899999998
Q ss_pred EeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHH
Q 038104 487 SVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLR 541 (567)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~ 541 (567)
++..+... .....++++++++++|+.|++|..++++++||+|++||++|++|+
T Consensus 449 ~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 449 QLVEGIRG--SDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred EecCCCCc--chhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 87754310 112356899999999999999999999999999999999999874
No 90
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-63 Score=498.26 Aligned_cols=517 Identities=25% Similarity=0.356 Sum_probs=421.0
Q ss_pred HHHHHHHH-cCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 19 FLKRAAAV-YGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 19 ~l~~~a~~-~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
++++.... .++.+++++.+ ..+||.|+.+++.++|+.|.++|+++||+|++++|+.++++++++||+++|++.
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~ 148 (626)
T KOG1175|consen 69 CLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIH 148 (626)
T ss_pred hhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEE
Confidence 33444333 38888888843 459999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccch---------HHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCccc
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYV---------QLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFE 162 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 162 (567)
+++...+++.++...+..+++++|++.+... ....+++........ .....+.+.... ....
T Consensus 149 ~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~-------~d~~ 219 (626)
T KOG1175|consen 149 SSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSR--PVWLDLIVSRRN-------RDLF 219 (626)
T ss_pred EEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhccccccc--ccceeeEEeccc-------cccc
Confidence 9999999999999999999999999975532 222232222211100 111111111111 1456
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHH-HhhHhhhhccCCCCCEEEEecchHhhhhHHH
Q 038104 163 YEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYL-STLSLILGWEMGSAPVYLWSLPMFHCNGWTF 241 (567)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~-~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 241 (567)
|+.+.....+...+ ...+..++.+|+|||||||.||++.+++..... .+......++++++|++++...+.|+.|..+
T Consensus 220 ~~~~~~~a~~~~~~-~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~ 298 (626)
T KOG1175|consen 220 WSLELKKASPEHPC-VPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSY 298 (626)
T ss_pred HHHHhhhcCCCCCc-eecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccch
Confidence 77666655555543 346778999999999999999999999887544 4445566778999999999999999999887
Q ss_pred -HHHHHhhCceeeeeC--CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCccc--ccCCCceEEEEcCCCCCHHHHHH
Q 038104 242 -TWGVAARGGTNVCLR--NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEER--KEIASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 242 -~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~l~~~~~~g~~l~~~~~~~ 316 (567)
.+++++.|+++++.+ ++++..+++.+.++++|.+++.|+.++.|.+...... ..+++||.+.+.||++.++..++
T Consensus 299 ~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew 378 (626)
T KOG1175|consen 299 VLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEW 378 (626)
T ss_pred hhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHH
Confidence 666899999999986 3489999999999999999999999998877654433 33467999999999999999999
Q ss_pred HH-HhCC-eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEE
Q 038104 317 IE-LLGF-HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVL 394 (567)
Q Consensus 317 ~~-~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v 394 (567)
+. .++. +|.+.||+||+|+.++.+..... -..+...+.|.++. .+.|.|. .+.+++.++ +.|+|++
T Consensus 379 ~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~-~~G~l~~ 446 (626)
T KOG1175|consen 379 WKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDE-NGNELPPST-GNGELRL 446 (626)
T ss_pred HHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECC-CCCCcCCCC-ceeEEEE
Confidence 98 5566 69999999999999988653221 23346778899998 9999998 778887766 7899999
Q ss_pred ecC---ccchhccCChhhhhhc-cc--CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEE
Q 038104 395 RGS---SIMKGYLKNEEATSQS-FK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEA 468 (567)
Q Consensus 395 ~~~---~~~~gy~~~~~~~~~~-~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 468 (567)
+.+ +.+++||+|++..... |. .|+|.|||.+++|+||++++.||.||+++++|.++++.|||+++..||.|.|+
T Consensus 447 ~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEs 526 (626)
T KOG1175|consen 447 KPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAES 526 (626)
T ss_pred eCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhhe
Confidence 984 6689999999944444 33 78999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhh
Q 038104 469 AVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 469 ~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
+||+.+++..|+++.+||++.++. .......++|++++|+.+.+++.|+.|.+++.||+|.+||+.|+.||+....-
T Consensus 527 AvVg~p~~~~ge~v~aFvvl~~g~--~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~- 603 (626)
T KOG1175|consen 527 AVVGSPDPIKGEVVLAFVVLKSGS--HDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK- 603 (626)
T ss_pred eeecCCCCCCCeEEEEEEEEcCCC--CChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC-
Confidence 999999999999999999999984 22234457888999999999999999999999999999999999999998876
Q ss_pred cccchhhhhhhc
Q 038104 549 VSKDHNAQSRAQ 560 (567)
Q Consensus 549 ~~~~~~~~~~~~ 560 (567)
...+...-++-+
T Consensus 604 ~~~d~st~~dp~ 615 (626)
T KOG1175|consen 604 AVGDTSTLADPS 615 (626)
T ss_pred ccccccccCChH
Confidence 556555544443
No 91
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.1e-63 Score=502.38 Aligned_cols=499 Identities=28% Similarity=0.366 Sum_probs=382.1
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCC----eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEG----ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
-..++..++.++++.+|+.+++.... +.+||+|+.+++.++|++|...|+..||+|+|++.|+++|+++.+||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~ 93 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILAL 93 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 34689999999999999998998643 79999999999999999999999977999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccc-hHHHHHHhhhhhccccCCCCCeEEE----EeCCCCCCCccCCccc
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY-VQLAREALKLYFVEDRDAAGPRVIL----IDDIDSPTGIRFGEFE 162 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~ii~----~~~~~~~~~~~~~~~~ 162 (567)
|++.||+.++.+++++.++|+.+++++|+++... .+.+.......+ ....+.. .+..............
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCP------KVVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhcccc------chhhhhhhhhhhhhccchhhccccccc
Confidence 9999999999999999999999999999998854 344433333211 0000110 0111000000001111
Q ss_pred HHHH----HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhcc-CCCCCEEEEecchHhhh
Q 038104 163 YEQF----VQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWE-MGSAPVYLWSLPMFHCN 237 (567)
Q Consensus 163 ~~~~----~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~ 237 (567)
+... ........ ......++|.|.++|||||||.||||+++|+|+++++........ .+++|+.++.+|+.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~-~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~ 246 (613)
T COG1022 168 DEGISLFLIDSAGLEG-RIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIF 246 (613)
T ss_pred cccchhhhhccccccc-ccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHH
Confidence 1111 11111111 113467889999999999999999999999999999999999886 99999999999999999
Q ss_pred hHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc----c---------------------
Q 038104 238 GWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE----E--------------------- 292 (567)
Q Consensus 238 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~--------------------- 292 (567)
...+...... ++........++..++..++.++||++.++|.+|+.+-+...+ .
T Consensus 247 Er~~~~~~~~-~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 247 ERAFEGGLAL-YGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHHHh-hcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 9876433333 3333344467899999999999999999999999877542100 0
Q ss_pred ----------------------cccC-CCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccCCCccccccccccCCC
Q 038104 293 ----------------------RKEI-ASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQL 349 (567)
Q Consensus 293 ----------------------~~~l-~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~ 349 (567)
...+ ..++.+++||+++++++..+++..|+++.+.||+||+++.++.++.+
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~------ 399 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPD------ 399 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEcccc------
Confidence 1112 37889999999999999999999999999999999999888876422
Q ss_pred CCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEEe
Q 038104 350 PKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVIH 428 (567)
Q Consensus 350 ~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~ 428 (567)
......+|.|+|+. +++|.|. |||+|+||++|.|||++|+.|.+.|. ||||+|||+|.+|
T Consensus 400 -----~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d 460 (613)
T COG1022 400 -----RFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELD 460 (613)
T ss_pred -----CcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEc
Confidence 22346789999998 9999983 99999999999999999999999998 9999999999999
Q ss_pred cCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCC-------CCCCC
Q 038104 429 PDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGK-------TDDVN 500 (567)
Q Consensus 429 ~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~-------~~~~~ 500 (567)
++|.|++.||++|+|+ .+|++|.|+.||..+.++|.|.+.+|++..++ .+.|+|++......+ ....+
T Consensus 461 ~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~----~~~AlIvp~~~~l~~~a~~~~~~~~~~ 536 (613)
T COG1022 461 EDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK----FLVALIVPDFDALEKWAESLNKVISAS 536 (613)
T ss_pred CCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----ceEEEEeCCHHHHHHHHHhccccccCC
Confidence 9999999999999999 89999999999999999999999999994333 377888776442110 00001
Q ss_pred H------HHHHHHH----H---hhCCCCccccEEEEeC-CCC-----CCCCCccchHHHHHHHHhh
Q 038104 501 E------ADILSYC----R---ENLSRFMVPKKVVILP-ELP-----KTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 501 ~------~~l~~~~----~---~~l~~~~~p~~i~~v~-~~P-----~t~~GKv~r~~l~~~~~~~ 547 (567)
. .++.+.. . .....+..+.++.+.. ++. .|++=|++|..+.+.+.+-
T Consensus 537 ~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~ 602 (613)
T COG1022 537 REELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDE 602 (613)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhH
Confidence 1 1122222 1 1234445666666543 333 6889999999998888764
No 92
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-62 Score=526.35 Aligned_cols=511 Identities=22% Similarity=0.278 Sum_probs=386.9
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeC---------------------------CeeeeHHHHHHHHHHHHHHHHhCCCCCC
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYE---------------------------GARFNWLQTYDRCRRLASSLRSLNMPKH 64 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~el~~~v~~la~~L~~~g~~~g 64 (567)
...|+.++|.++++.+||++|+.+. .+.+||+||.++++++|++|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3458999999999999999999872 3789999999999999999999999999
Q ss_pred CEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeE
Q 038104 65 SVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRV 144 (567)
Q Consensus 65 d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~i 144 (567)
|+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++.+++++++++......+.+....... ....+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~-----~~~~i 221 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGM-----PNTTI 221 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccC-----CceEE
Confidence 9999999999999999999999999999999999999999999999999999987765555443332110 12345
Q ss_pred EEEeCCCCC-CCccCCcccHHHHHhcCC--CC-CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc-
Q 038104 145 ILIDDIDSP-TGIRFGEFEYEQFVQMGD--PR-FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW- 219 (567)
Q Consensus 145 i~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~- 219 (567)
+.+++.... .........|.++...+. .. ........++++++++|||||||.||||+++|+++...+......+
T Consensus 222 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~ 301 (700)
T PTZ00216 222 IYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLN 301 (700)
T ss_pred EEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcc
Confidence 555432211 111223467887776542 11 1112234678999999999999999999999999988776654333
Q ss_pred ----cCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCCHHHHHH-------HHHhcCcceeecchHHHHHHHhc
Q 038104 220 ----EMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYR-------NISQHRVTHMCCAPIVFNILLQA 288 (567)
Q Consensus 220 ----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~~~l~~~ 288 (567)
.+.++|++++.+|++|.+++......+..|+++.+. ++..+++ .+++++||++.++|.+++.+.+.
T Consensus 302 ~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~ 378 (700)
T PTZ00216 302 DLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKA 378 (700)
T ss_pred cccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHH
Confidence 246789999999999999876655555666655442 4445544 68899999999999999888643
Q ss_pred CCcc----------------------------------------cccC-CCceEEEEcCCCCCHHHHHHHHH-hCCeeec
Q 038104 289 KPEE----------------------------------------RKEI-ASPVQILTGGAPPPASLLEEIEL-LGFHVTH 326 (567)
Q Consensus 289 ~~~~----------------------------------------~~~l-~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~ 326 (567)
.... ...+ +++|.+++||+++++++.++++. ++ ++++
T Consensus 379 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~ 457 (700)
T PTZ00216 379 VEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQ 457 (700)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhh
Confidence 1100 0001 57999999999999999988874 46 9999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCC-cCCCCcceeEEEEecCccchhccC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSS-VPRDGKTMGEIVLRGSSIMKGYLK 405 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~-~~~~~~~~Gel~v~~~~~~~gy~~ 405 (567)
.||+||+++.++..... .....++|.|+++. +++|+|.+.... .+.+ ..|||+++|++++.||++
T Consensus 458 ~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~~GY~~ 523 (700)
T PTZ00216 458 GWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLFKGYYK 523 (700)
T ss_pred ccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcccchhcC
Confidence 99999998665432210 11236789999998 999998754221 2222 569999999999999999
Q ss_pred Chhhhhhccc-CCcccCCceEEEecCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEE--EEEeecCCCCCCc
Q 038104 406 NEEATSQSFK-NGWFRTGDVGVIHPDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEA--AVVAMPHPQWGES 481 (567)
Q Consensus 406 ~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~~~~g~~ 481 (567)
+|+.|.+.|. +|||+|||+|++++||++++.||.||+|| .+|++|+|.+||.++.++|.|.++ +|++.++ ...
T Consensus 524 ~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~---~~~ 600 (700)
T PTZ00216 524 QEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA---RSY 600 (700)
T ss_pred ChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC---Cce
Confidence 9999999995 89999999999999999999999999998 999999999999999999999973 3433322 245
Q ss_pred eeEEEEeecCCC-----CCCCCCC----------HHHHHHHHH-----hhCCCCccccEEEEeCC-C-----CCCCCCcc
Q 038104 482 PCAFISVKTNSA-----GKTDDVN----------EADILSYCR-----ENLSRFMVPKKVVILPE-L-----PKTATGKI 535 (567)
Q Consensus 482 ~~~~v~~~~~~~-----~~~~~~~----------~~~l~~~~~-----~~l~~~~~p~~i~~v~~-~-----P~t~~GKv 535 (567)
++++|+...... ..+...+ .+.+.+.+. +.+..|..++.|.++.+ | ..|+++|+
T Consensus 601 l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~ 680 (700)
T PTZ00216 601 ICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKL 680 (700)
T ss_pred EEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhcc
Confidence 778877642110 0000000 122233222 35778889999998753 2 46999999
Q ss_pred chHHHHHHHHhhh
Q 038104 536 QKFQLRALAKNFA 548 (567)
Q Consensus 536 ~r~~l~~~~~~~~ 548 (567)
+|+.+++.|++..
T Consensus 681 ~R~~i~~~y~~~i 693 (700)
T PTZ00216 681 KRRVIDERYADLI 693 (700)
T ss_pred chHHHHHHHHHHH
Confidence 9999999998764
No 93
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-62 Score=505.13 Aligned_cols=457 Identities=26% Similarity=0.387 Sum_probs=387.0
Q ss_pred HHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHH
Q 038104 24 AAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNV 103 (567)
Q Consensus 24 a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (567)
+...++++|+.+.++++||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+++..+.+++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l 84 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAER 84 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHH
Confidence 3456889999999999999999999999999996 47999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCC
Q 038104 104 ASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEW 183 (567)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (567)
.++++.+++++++++..... . ....+ ...... ..+. ......++
T Consensus 85 ~~~l~~~~~~~il~~~~~~~------~---------~~~~~-~~~~~~---------~~~~-----------~~~~~~~~ 128 (471)
T PRK07787 85 RHILADSGAQAWLGPAPDDP------A---------GLPHV-PVRLHA---------RSWH-----------RYPEPDPD 128 (471)
T ss_pred HHHHHhcCCCEEEecCCccc------c---------cccce-eeeccc---------cccc-----------cCCCCCCC
Confidence 99999999999999763100 0 11110 000000 0000 01113567
Q ss_pred CcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCceeeeeCCCCHHH
Q 038104 184 DPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYD 262 (567)
Q Consensus 184 ~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~ 262 (567)
++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|..|+.. ++.++..|+++++...+++..
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 208 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEA 208 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHH
Confidence 9999999999999999999999999988877777788899999999999999998875 777888999999888899999
Q ss_pred HHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccc
Q 038104 263 MYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCE 341 (567)
Q Consensus 263 ~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~ 341 (567)
+++.++ ++++.+.++|+++..++.... ....++++|.+++||+++++++.+.+. .++.++++.||+||++.......
T Consensus 209 ~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 286 (471)
T PRK07787 209 YAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRA 286 (471)
T ss_pred HHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCC
Confidence 999999 999999999999999987432 234677899999999999999999998 46899999999999975443321
Q ss_pred cccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCccc
Q 038104 342 WQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFR 420 (567)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~ 420 (567)
. .......+|.|+++. .++|+|.+ +.+++....+.|||+++|++++.||+++++.+.+.|. +|||+
T Consensus 287 ~-----------~~~~~~~vG~~~~g~-~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~ 353 (471)
T PRK07787 287 D-----------GERRPGWVGLPLAGV-ETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFR 353 (471)
T ss_pred C-----------CcccCCcccccCCCc-EEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCcee
Confidence 0 011234689999987 89999875 5666533224799999999999999999999998886 89999
Q ss_pred CCceEEEecCCcEEEEccC-CceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCC
Q 038104 421 TGDVGVIHPDGYLEIKDRS-KDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDV 499 (567)
Q Consensus 421 TGD~~~~~~~g~l~~~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~ 499 (567)
|||+|++++||.+++.||. +++++.+|.+++|.+||++|.+++.|.+++|++.+++..+++++++|+... ..
T Consensus 354 TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~-------~~ 426 (471)
T PRK07787 354 TGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGAD-------DV 426 (471)
T ss_pred cCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCC-------CC
Confidence 9999999999999999996 899999999999999999999999999999999999888899999988732 45
Q ss_pred CHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 500 NEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 500 ~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+.+++.+++++.++.|++|..++++++||+|.+||++|+.|+++
T Consensus 427 ~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 427 AADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred CHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 78899999999999999999999999999999999999999763
No 94
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.4e-62 Score=504.76 Aligned_cols=451 Identities=24% Similarity=0.304 Sum_probs=384.5
Q ss_pred CHHHHH-HHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 15 SPLTFL-KRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 15 tl~~~l-~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
++.++. .++++++|+++|+++.+..+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 445544 4568899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++..+.+++..+++.+++++++++.+... +.. .... .... . .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-------------~~~~-~~~~--------------------~--~ 125 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA-------------LTSL-HLQL--------------------V--E 125 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh-------------cccc-cccc--------------------c--c
Confidence 999999999999999999999999766422 100 0000 0000 0 0
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNV 253 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~ 253 (567)
........++++++++|||||||.||+|.++|++++.........+++.++|+++..+|++|.+|+..++.++..|++++
T Consensus 126 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~ 205 (458)
T PRK09029 126 GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLV 205 (458)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEE
Confidence 00112245678999999999999999999999999998888888888999999999999999999877777888899988
Q ss_pred eeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeecccccccc
Q 038104 254 CLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEA 333 (567)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~ 333 (567)
+.+. ..+++.+. +++.+..+|+++..++..... ..+++.+++||+++++.+.+.+..++.++++.||+||+
T Consensus 206 ~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~ 276 (458)
T PRK09029 206 VRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEM 276 (458)
T ss_pred eCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHcCCcEecccccccc
Confidence 7664 45667764 789999999999998876432 34799999999999999999998889999999999999
Q ss_pred CCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhc
Q 038104 334 TGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQS 413 (567)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 413 (567)
+...+.... .....+|.|+++. .+++.+ |||+++|+.++.||+++++.+...
T Consensus 277 ~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~ 328 (458)
T PRK09029 277 ASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQGQLVPLV 328 (458)
T ss_pred CcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCccccccc
Confidence 865443210 0123578888877 666653 899999999999999999887766
Q ss_pred ccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC
Q 038104 414 FKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA 493 (567)
Q Consensus 414 ~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 493 (567)
..+|||+|||+|+++ +|.+++.||++|+|+++|.+|+|.+||++|.++|+|.+++|++.+++..|+.++++|+...
T Consensus 329 ~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--- 404 (458)
T PRK09029 329 NDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--- 404 (458)
T ss_pred cCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc---
Confidence 678999999999999 9999999999999999999999999999999999999999999999998999999988652
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 494 GKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 494 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
..+.++++++++++++.|++|..+++++++|+|.+||++|+.|++++++.
T Consensus 405 ----~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 405 ----EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQ 454 (458)
T ss_pred ----ccCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhc
Confidence 35788999999999999999999999999999999999999999988753
No 95
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3e-62 Score=500.81 Aligned_cols=429 Identities=21% Similarity=0.279 Sum_probs=358.0
Q ss_pred eeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEE
Q 038104 39 RFNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (567)
.+.|.||.++++++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCC
Q 038104 118 DCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSA 197 (567)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 197 (567)
+.+.... . ... .. . ......++++++++|||||||.
T Consensus 99 ~~~~~~~---------------~------~~~-----------~~-------~-----~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 99 LDQLKLS---------------H------PPP-----------LP-------S-----QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred cCccccc---------------c------CCC-----------CC-------c-----cccCCCCCCcEEEEeCCCCCCC
Confidence 7653210 0 000 00 0 0011345789999999999999
Q ss_pred CceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeec
Q 038104 198 PKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 198 pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~ 277 (567)
||+|.++|+++...+......+++.+ ++.++.+|++|.+|+..++.+++.|+++++.+............+++++++.+
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~ 213 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSL 213 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEe
Confidence 99999999999887777666666654 46788999999999988888899999998886432232334445788999999
Q ss_pred chHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccCCCccccccccccCCCCCchhhhh
Q 038104 278 APIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKL 357 (567)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (567)
+|+++..+++.. ...+++++.+++||+++++++.+.+...++++++.||+||++..++.... ......
T Consensus 214 vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~---------~~~~~~ 281 (452)
T PRK07445 214 VPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP---------DDFLAG 281 (452)
T ss_pred hHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc---------hhhccC
Confidence 999999998632 23578999999999999999999888778999999999999765443210 011112
Q ss_pred ccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEc
Q 038104 358 KARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKD 437 (567)
Q Consensus 358 ~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~G 437 (567)
...+|.|.++. .++++ .+ +.|||+++|+.++.||++++.. .+|||+|||+|++|+||++++.|
T Consensus 282 ~~~~G~~~p~~-~v~i~---------~g--~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~l~~~G 344 (452)
T PRK07445 282 NNSSGQVLPHA-QITIP---------AN--QTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLDAQGYLHILG 344 (452)
T ss_pred CCcCCccCCCC-eEEEc---------CC--CcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEcCCCCEEEEe
Confidence 34679998887 77776 12 6799999999999999986431 36899999999999999999999
Q ss_pred cCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCcc
Q 038104 438 RSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMV 517 (567)
Q Consensus 438 R~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 517 (567)
|.||+|+.+|++|+|.+||.+|.++|+|.+++|++++++..|+.++++++..++ ..+.++++++++++++.|++
T Consensus 345 R~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~------~~~~~~l~~~~~~~L~~~~~ 418 (452)
T PRK07445 345 RNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP------SISLEELKTAIKDQLSPFKQ 418 (452)
T ss_pred ecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC------CCCHHHHHHHHHHhCCcccC
Confidence 999999999999999999999999999999999999999989999999887644 34678999999999999999
Q ss_pred ccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 518 PKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 518 p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
|+.++++++||+|++||++|++|++++.+.
T Consensus 419 P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 419 PKHWIPVPQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred CeEEEEecCCCCCCCcccCHHHHHHHHHHh
Confidence 999999999999999999999999988764
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.1e-61 Score=508.24 Aligned_cols=492 Identities=21% Similarity=0.257 Sum_probs=408.4
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
+++.++|.++++.+|+++++.+.+..+||+||.+++.++|.+|.+.|+++||+|+++++|+.+++++++||+++|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++.++.+++.++++..++++++++...... . .....+..++ +.+... ....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~~-------------~~~~~~-~~~~ 133 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLE----I----------LGIPVITLDE-------------LKDIFA-TGNP 133 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEeccccccc----c----------cCCcEEehHH-------------hhhhhh-cccc
Confidence 9999999999999999999999998664100 0 1111111111 111110 0111
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceee
Q 038104 174 FLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNV 253 (567)
Q Consensus 174 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~ 253 (567)
.........+++++++|||||||.||+|.++|+++..........+.+..+++++...|++|..++...+.++..|++++
T Consensus 134 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v 213 (503)
T PRK04813 134 YDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLV 213 (503)
T ss_pred ccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEE
Confidence 11112245678999999999999999999999999988887777788899999999999999998887888899999999
Q ss_pred eeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-Hh-CCeeeccc
Q 038104 254 CLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LL-GFHVTHAY 328 (567)
Q Consensus 254 ~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~-~~~i~~~y 328 (567)
+.+. .++..+++.+++++++.+..+|+++..+..........+++++.++++|+++++.+.+.+. .+ ++.+++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~y 293 (503)
T PRK04813 214 ALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTY 293 (503)
T ss_pred EcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCc
Confidence 8875 4788999999999999999999999887665544556788999999999999999999998 45 78999999
Q ss_pred cccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh
Q 038104 329 GLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE 408 (567)
Q Consensus 329 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 408 (567)
|+||++..+........ .........+|.+.++. .+++.+. ++..++.+ +.|||+++|+.++.||+++++
T Consensus 294 G~tE~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 363 (503)
T PRK04813 294 GPTEATVAVTSIEITDE------MLDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSVSKGYLNNPE 363 (503)
T ss_pred ccchheeEEEEEEeccc------ccccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEeccccccccCCChh
Confidence 99999765544322111 01112234688898887 8888885 56677766 789999999999999999999
Q ss_pred hhhhccc--C--CcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeE
Q 038104 409 ATSQSFK--N--GWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCA 484 (567)
Q Consensus 409 ~~~~~~~--~--~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 484 (567)
.+...|. + +||+|||+|++ ++|.+++.||.+|+++.+|.+++|.+||+++.++|+|.+++|++.++...++.+++
T Consensus 364 ~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 442 (503)
T PRK04813 364 KTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIA 442 (503)
T ss_pred HhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEE
Confidence 9988773 3 49999999999 89999999999999999999999999999999999999999999887777788888
Q ss_pred EEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 485 FISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 485 ~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
+++..++... .......+++++++++++.|++|..++++++||+|.+||++|+.|++++.
T Consensus 443 ~v~~~~~~~~-~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 443 YVVPKEEDFE-REFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred EEEecccccc-ccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 8887654210 00122356899999999999999999999999999999999999998875
No 97
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.7e-62 Score=605.06 Aligned_cols=498 Identities=22% Similarity=0.287 Sum_probs=418.5
Q ss_pred ccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 9 ANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.++.+.++.++|.++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|
T Consensus 507 ~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG 586 (3956)
T PRK12467 507 TEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAG 586 (3956)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 34466799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHh
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQ 168 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 168 (567)
++++|++|.++.+++.++++.+++++++++.+....+.. . ....++.++..... ..
T Consensus 587 ~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~----~-------~~~~~~~~~~~~~~-------------~~ 642 (3956)
T PRK12467 587 GAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV----P-------AGLRSLCLDEPADL-------------LC 642 (3956)
T ss_pred cEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc----c-------cCccEEEecccccc-------------cc
Confidence 999999999999999999999999999998754322110 0 11223333221100 00
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhh
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAAR 248 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 248 (567)
......+.....++++++++|||||||.||||.++|+++..........+++.++|+++...|++|..++..++.++..
T Consensus 643 -~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 721 (3956)
T PRK12467 643 -GYSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELFGALAS 721 (3956)
T ss_pred -ccCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHHHHHhC
Confidence 0111112223567899999999999999999999999999988888888899999999999999999998889999999
Q ss_pred CceeeeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHh--CCe
Q 038104 249 GGTNVCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELL--GFH 323 (567)
Q Consensus 249 g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~ 323 (567)
|+++++.+. .++..+++.|+++++|++.++|+++..|+.... .....++|.+++|||++++++.+.|... +++
T Consensus 722 G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~ 799 (3956)
T PRK12467 722 GATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASR--VALPRPQRALVCGGEALQVDLLARVRALGPGAR 799 (3956)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhc--cccCCcccEEEEEeecCCHHHHHHHHHhCCCCE
Confidence 999999874 589999999999999999999999999987532 2345577999999999999999999854 589
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||++..++....... ........+|.|+++. .++|.|. .+++++.| +.|||+|+|+++++||
T Consensus 800 l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~GY 868 (3956)
T PRK12467 800 LINHYGPTETTVGVSTYELSDE-------ERDFGNVPIGQPLANL-GLYILDH-YLNPVPVG--VVGELYIGGAGLARGY 868 (3956)
T ss_pred EEeCcCCChhhhheeeEecccc-------cccCCCCcccCCcCCC-EEEEECC-CCCCCCCC--CceEEEecccccchhh
Confidence 9999999999877665432111 0001124689999998 8999886 56788887 8899999999999999
Q ss_pred cCChhhhhhccc--------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecC
Q 038104 404 LKNEEATSQSFK--------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPH 475 (567)
Q Consensus 404 ~~~~~~~~~~~~--------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 475 (567)
+++|+.|.++|. ++||+|||+|++++||.++++||.||+||++|++|+|.+||..|.++|+|.+++|++.++
T Consensus 869 l~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~a~v~~~~~ 948 (3956)
T PRK12467 869 HRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVREAVVLAQPG 948 (3956)
T ss_pred cCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcceEEEEEEcC
Confidence 999999999883 239999999999999999999999999999999999999999999999999999999665
Q ss_pred CCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 476 PQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 476 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
. .+..++++++..............+++++++++.||.|++|..++++++||+|++||++|++|.+...
T Consensus 949 ~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 1017 (3956)
T PRK12467 949 D-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPDA 1017 (3956)
T ss_pred C-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCccc
Confidence 4 46778999886543322223456789999999999999999999999999999999999999987543
No 98
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-61 Score=503.40 Aligned_cols=485 Identities=26% Similarity=0.366 Sum_probs=400.9
Q ss_pred eEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhc
Q 038104 31 TSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHS 110 (567)
Q Consensus 31 ~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (567)
.|+...++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCC----------CCCCccCCcccHHHHHhcCCCCCCCCCCC
Q 038104 111 EAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDID----------SPTGIRFGEFEYEQFVQMGDPRFLPEEIH 180 (567)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (567)
++++++++......+.+... ....++...+.. ...........|.+....... ....
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 149 (509)
T PRK12406 83 GARVLIAHADLLHGLASALP---------AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDGP 149 (509)
T ss_pred CCcEEEEccchhhhhhhhhh---------cccceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCCC
Confidence 99999998876665443321 111122111100 000112234456655432211 1123
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHH---HHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRG---AYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN 257 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~---l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~ 257 (567)
..+++++++|||||||.||+|.++|.. +..........+++.++++++...|++|..+..+.+.++..|+++++.+.
T Consensus 150 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~ 229 (509)
T PRK12406 150 PVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPR 229 (509)
T ss_pred CCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccC
Confidence 567999999999999999999986654 33333334456778999999999999999888777777888999998888
Q ss_pred CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHHH-hCCeeeccccccccC
Q 038104 258 TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIEL-LGFHVTHAYGLTEAT 334 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~yG~tE~~ 334 (567)
.++..+++.++++++|.+.++|+++..|+..... ....+++++.+++||+++++++++.+.+ +++.+++.||+||++
T Consensus 230 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 309 (509)
T PRK12406 230 FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESG 309 (509)
T ss_pred CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccC
Confidence 8999999999999999999999999999875432 2345789999999999999999999984 589999999999998
Q ss_pred CCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccch-hccCChhhhhhc
Q 038104 335 GPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMK-GYLKNEEATSQS 413 (567)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~~ 413 (567)
.+++.+.. ........+|.+.++. .+++.+. ++.+++.+ +.|||+++++.++. ||+++++.+...
T Consensus 310 ~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~ 375 (509)
T PRK12406 310 AVTFATSE----------DALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEI 375 (509)
T ss_pred ceEecCcc----------cccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccc
Confidence 76543321 1111224679999887 8999885 56777776 78999999998875 899999988888
Q ss_pred ccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCC
Q 038104 414 FKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSA 493 (567)
Q Consensus 414 ~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 493 (567)
+.++||+|||+++++++|.+++.||.+|+++++|.+|+|.+||..|.++++|.++++++.++...++.++++++..++.
T Consensus 376 ~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~- 454 (509)
T PRK12406 376 DRGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGA- 454 (509)
T ss_pred cCCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCC-
Confidence 8899999999999999999999999999999999999999999999999999999999999988888888988876554
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 494 GKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 494 ~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
..+.+++++.+++.++.|++|..++++++||+|.+||++|++|++.+.+.
T Consensus 455 ----~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 455 ----TLDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred ----CCCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999887765
No 99
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-62 Score=611.33 Aligned_cols=483 Identities=21% Similarity=0.264 Sum_probs=414.8
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.++.++|.++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|++|.++.+++.++++.++++++|++......+... ....++.++.... + .. ...
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~----------~---~~-~~~ 644 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA-----------AGVQVLDLDRPAA----------W---LE-GYS 644 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc-----------cCceEEEecCcch----------h---hc-cCC
Confidence 999999999999999999999999987653322100 1223333332110 0 00 111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
...+.....++++++++|||||||.||||.++|+++.....+....+++.++|+++..+|++|..++..++.+++.|+++
T Consensus 645 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l 724 (5163)
T PRK12316 645 EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARL 724 (5163)
T ss_pred CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEE
Confidence 11122234678999999999999999999999999999988888889999999999999999999988899999999999
Q ss_pred eeeC---CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-Hh-CCeeecc
Q 038104 253 VCLR---NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LL-GFHVTHA 327 (567)
Q Consensus 253 ~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~-~~~i~~~ 327 (567)
++.+ ..++..+++.|+++++|++.++|+++..|++.. ....+++++.+++|||++++++.+.+. .+ ++++++.
T Consensus 725 ~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~--~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 802 (5163)
T PRK12316 725 VVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDE--DVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNL 802 (5163)
T ss_pred EECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcc--ccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeC
Confidence 9985 368999999999999999999999999998653 234678999999999999999999986 34 6899999
Q ss_pred ccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCCh
Q 038104 328 YGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNE 407 (567)
Q Consensus 328 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 407 (567)
||+||++..++..... ........+|.|+++. .++|+|. .+.++|.| +.|||+|+|+++++||++++
T Consensus 803 YG~TE~~~~~~~~~~~---------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GYl~~~ 869 (5163)
T PRK12316 803 YGPTEAAIDVTHWTCV---------EEGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRGLARGYHGRP 869 (5163)
T ss_pred cCcChheeeeeEEecc---------cccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccChhhCCCh
Confidence 9999998655443210 0111234689999998 8999986 56778877 88999999999999999999
Q ss_pred hhhhhccc-------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 408 EATSQSFK-------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 408 ~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
+.|.+.|. ++||+|||+|++++||.+++.||.||+||++|++|+|.|||.+|.++|+|.+++|++.+ |+
T Consensus 870 ~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~ 945 (5163)
T PRK12316 870 GLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GK 945 (5163)
T ss_pred hhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CC
Confidence 99999883 35999999999999999999999999999999999999999999999999999999886 67
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHH
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALA 544 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~ 544 (567)
.++++|+..++. ....++++++++++|+.|++|..++++++||+|++||++|++|.+..
T Consensus 946 ~lva~vv~~~~~-----~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 946 QLVGYVVLESEG-----GDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred eEEEEEEccCCC-----CCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 899999887654 45688999999999999999999999999999999999999997653
No 100
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-60 Score=500.71 Aligned_cols=495 Identities=26% Similarity=0.343 Sum_probs=402.8
Q ss_pred HHHHHHHcCCceEEEe--CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC
Q 038104 20 LKRAAAVYGNRTSIIY--EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR 97 (567)
Q Consensus 20 l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 97 (567)
....++++|+++|+++ .+..+||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3467889999999987 46789999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCC
Q 038104 98 LDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPE 177 (567)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
++.+.+.++++.++++.++++......+.+...... .....+.+++.... .....+.+.....+. .
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~ 148 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP------GVRHRLVLDGDGEL----EGFVGYAEAVAGLPA----T 148 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC------CceEEEEecCCCCC----cccccHHHHhcCCCC----C
Confidence 999999999999999999999887666655544322 22233333321111 112233433322111 1
Q ss_pred CCCCCCCcEEEEeccCCCCCCceEEec--hHHHHH---HhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 178 EIHDEWDPITLNYTSGTTSAPKGVVYS--HRGAYL---STLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 178 ~~~~~~~~a~i~~TSGtTG~pK~v~~~--~~~l~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
...+.++.++++|||||||.||+|.++ |.+... ........+++..+++++..+|++|.+++...+.++..|+++
T Consensus 149 ~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~ 228 (511)
T PRK13391 149 PIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTV 228 (511)
T ss_pred CCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceE
Confidence 112345678999999999999999954 555432 223334456778899999999999999988888888999999
Q ss_pred eeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHHH-hCCeeecccc
Q 038104 253 VCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIEL-LGFHVTHAYG 329 (567)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~yG 329 (567)
++.+.+++..+++.++++++|++.++|+++..+...... ....+++++.+++||+++++++.+.+.+ ++..+++.||
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG 308 (511)
T PRK13391 229 IVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYA 308 (511)
T ss_pred EECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeec
Confidence 999889999999999999999999999999988765432 2235789999999999999999999984 6889999999
Q ss_pred ccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhh
Q 038104 330 LTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEA 409 (567)
Q Consensus 330 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 409 (567)
+||+++++..... ........+|.|.++ .+++++. ++.+++.| +.|||+++|+ ++.||+++++.
T Consensus 309 ~tE~~~~~~~~~~----------~~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~gy~~~~~~ 372 (511)
T PRK13391 309 ATEGLGFTACDSE----------EWLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RPFEYLNDPAK 372 (511)
T ss_pred cccccceEEecCc----------cccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cceEEcCChhH
Confidence 9999876543210 011223467888887 4777774 56666666 7899999999 88899999999
Q ss_pred hhhccc--CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEE
Q 038104 410 TSQSFK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFIS 487 (567)
Q Consensus 410 ~~~~~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~ 487 (567)
+.+.+. ++||+|||+|+++++|.+++.||.+|+++.+|.+++|.+||++|.++|.|.+++|++++++..|+.++++++
T Consensus 373 ~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~ 452 (511)
T PRK13391 373 TAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQ 452 (511)
T ss_pred hHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEE
Confidence 888775 489999999999999999999999999999999999999999999999999999999999988998988888
Q ss_pred eecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 488 VKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
..++... .....++++++++++++.|++|..|.+++++|+|++||++|+.|++.+..
T Consensus 453 ~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 453 PVDGVDP--GPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred ECCCCCc--ccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 7654311 12345789999999999999999999999999999999999999998754
No 101
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.6e-62 Score=611.25 Aligned_cols=489 Identities=21% Similarity=0.245 Sum_probs=415.1
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.++.++|.++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|++|.++.+++.++++.+++++++++......+... .....+.++... .... . .
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----------~~~~~~~~~~~~-------------~~~~-~-~ 2135 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----------AGVARLPLDRDA-------------EWAD-Y-P 2135 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----------cccceEeccchh-------------hhhc-c-C
Confidence 999999999999999999999999987654432110 111122222100 0000 0 1
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
...+.....++++++++|||||||.||||.++|+++...+......++++++|+++...|++|..++..++.+++.|+++
T Consensus 2136 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~ 2215 (5163)
T PRK12316 2136 DTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPLLNGARV 2215 (5163)
T ss_pred ccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHHhCCCEE
Confidence 11112235678999999999999999999999999999988888888999999999999999998888899999999999
Q ss_pred eeeCC--CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeeeccc
Q 038104 253 VCLRN--TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVTHAY 328 (567)
Q Consensus 253 ~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~~~y 328 (567)
++.+. +++..+++.|+++++|++..+|+++..|....... ....++|.+++|||+++++..+.|.. + +.++++.|
T Consensus 2216 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 2294 (5163)
T PRK12316 2216 LIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD-GRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGY 2294 (5163)
T ss_pred EeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc-cCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECc
Confidence 66553 58899999999999999999999999998754322 23348999999999999999999984 3 68899999
Q ss_pred cccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh
Q 038104 329 GLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE 408 (567)
Q Consensus 329 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 408 (567)
|+||++..++....... .........+|.|+++. .+.|+|. .+.++|.| +.|||+|+|+++++||+++|+
T Consensus 2295 G~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~~GY~~~p~ 2364 (5163)
T PRK12316 2295 GPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLARGYLNRPG 2364 (5163)
T ss_pred cchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhcccccCChh
Confidence 99999866654321111 00111124689999998 8999886 56788887 899999999999999999999
Q ss_pred hhhhccc--------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCC
Q 038104 409 ATSQSFK--------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGE 480 (567)
Q Consensus 409 ~~~~~~~--------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 480 (567)
.|.+.|. ++||+|||+|++++||.++++||+||+||++|++|+|.|||.+|.++|+|.+++|++.++. .++
T Consensus 2365 ~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~ 2443 (5163)
T PRK12316 2365 LTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGK 2443 (5163)
T ss_pred hhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCe
Confidence 9999983 3599999999999999999999999999999999999999999999999999999998766 678
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHH
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALA 544 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~ 544 (567)
+++++|+..++. ..+.+++++++++.||.|++|..++++++||+|++||++|++|.+..
T Consensus 2444 ~l~a~v~~~~~~-----~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2444 QLVAYVVPDDAA-----EDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred EEEEEEEecCCC-----ccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 899999887654 56789999999999999999999999999999999999999997654
No 102
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-60 Score=527.83 Aligned_cols=490 Identities=16% Similarity=0.151 Sum_probs=379.2
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
...+|+.++|.++++++||++|+++.++++||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-Ccc--CCcccHHHHH
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-GIR--FGEFEYEQFV 167 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~~~--~~~~~~~~~~ 167 (567)
++|++|. +++.++++.++++++|++.+..+.+.+. ...++.++...... ... .....+.+..
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~------------~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~ 588 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL------------PGRVLVLGGGESRDLDLPDDADVIDMEKID 588 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc------------CceEEEecCCccccccCCcchhhhhhhhcC
Confidence 9999985 6899999999999999987765544321 13444444221100 000 0011111111
Q ss_pred hcCC--CCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHH
Q 038104 168 QMGD--PRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGV 245 (567)
Q Consensus 168 ~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 245 (567)
.... +.........++++++++|| ||||.||++.++|.++..........+++.++|++++.+|++|.+++...+.+
T Consensus 589 ~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~ 667 (994)
T PRK07868 589 PDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGG 667 (994)
T ss_pred cccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHH
Confidence 1000 00001111235789999998 57777777777887766555555556788899999999999999999876655
Q ss_pred HhhCce-eeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhC-C
Q 038104 246 AARGGT-NVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLG-F 322 (567)
Q Consensus 246 ~~~g~~-~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~-~ 322 (567)
++.|++ +++.+.+++..+++.|+++++|++.++|+++..|++........++++|.++ |+.+++++.+.+. .++ +
T Consensus 668 ~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~ 745 (994)
T PRK07868 668 AVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPA 745 (994)
T ss_pred HhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCch
Confidence 555555 4455678999999999999999999999999999876544444567888765 3459999999988 454 7
Q ss_pred eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEee----------CCCC--CCcCCCCccee
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKN----------LDTM--SSVPRDGKTMG 390 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~----------~~~~--~~~~~~~~~~G 390 (567)
++++.||+||++...... . .....++|+|+++...+++.+ .+.+ ..++.| +.|
T Consensus 746 ~l~~~YG~TE~~~~~~~~---------~----~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g--e~G 810 (994)
T PRK07868 746 HVVEFFATTDGQAVLANV---------S----GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN--EVG 810 (994)
T ss_pred heeeeeeccccccccccc---------C----CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC--Cce
Confidence 899999999986543211 0 012356899999864455531 1222 334444 889
Q ss_pred EEEEecCccchhccCChhhhh--hccc--CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCce
Q 038104 391 EIVLRGSSIMKGYLKNEEATS--QSFK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVL 466 (567)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~--~~~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 466 (567)
||+++++..+ +++.+. ..|. +|||+|||+|++|+||+++++||.||+||++|.+|+|.+||++|.++|.|.
T Consensus 811 el~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~ 885 (994)
T PRK07868 811 VLLARARGPI-----DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVD 885 (994)
T ss_pred EEEEecCCCC-----ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCee
Confidence 9999997532 343322 2242 789999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHH
Q 038104 467 EAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAK 545 (567)
Q Consensus 467 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~ 545 (567)
+++|++++++. ++.++++|++.++. ..+.++|++++++ ++.|++|+.|+++++||+|++||++|++|+++..
T Consensus 886 ~aaVvg~~d~~-~~~~~a~Vv~~~~~-----~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 886 LAVTYGVEVGG-RQLAVAAVTLRPGA-----AITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred EEEEEeecCCC-CceEEEEEEeCCCC-----cCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 99999998876 67889999887654 5678899999986 9999999999999999999999999999987643
No 103
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.8e-60 Score=543.75 Aligned_cols=500 Identities=21% Similarity=0.265 Sum_probs=403.5
Q ss_pred CCCCCHHHHHHHHHHHcC-CceEEEe-CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 11 YVPLSPLTFLKRAAAVYG-NRTSIIY-EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
..+.++.+.+.+.++++| +++++.+ .++++||+||.++++++|++|.+ |+++||+|+++++|+++++++++||+++|
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 346788999999888886 5677776 46899999999999999999976 99999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHH--HHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHH
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLA--REALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQF 166 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~--~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 166 (567)
++++++|+..+.+++.++++++++++++++++..+.. .+...... ....++.+++..... .....+.+.
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~~~~ 777 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE------FGIRIIYLEDVRAQI---GLADKIKGL 777 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc------cCceEEEehHhhccC---ChHHHHHHH
Confidence 9999999999999999999999999999987654432 11111111 223455554321110 000011111
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHH-HHHHH
Q 038104 167 VQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWT-FTWGV 245 (567)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~ 245 (567)
.....+.. +.....++++++++|||||||.||+|.++|+++..+.......++++++|+++..+|++|.+++. ..+.+
T Consensus 778 ~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 856 (1140)
T PRK06814 778 LAGRFPLV-YFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLP 856 (1140)
T ss_pred hhccCCcc-ccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHH
Confidence 11111111 11124678999999999999999999999999988888877888899999999999999999984 46778
Q ss_pred HhhCceeeeeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCe
Q 038104 246 AARGGTNVCLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFH 323 (567)
Q Consensus 246 ~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 323 (567)
+..|+++++.+. .+...+.+.++++++|.+.++|++++.+.+.. ....++++|.+++||+++++++.+.+. .++++
T Consensus 857 l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~ 934 (1140)
T PRK06814 857 LLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFGIR 934 (1140)
T ss_pred HHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHhCCc
Confidence 889999988864 46677889999999999999999999987653 335678999999999999999999988 56999
Q ss_pred eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhc
Q 038104 324 VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGY 403 (567)
Q Consensus 324 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy 403 (567)
+++.||+||++..+..+... ......+|+|.++. ++++.+.+. .+ +.|||+++|++++.||
T Consensus 935 ~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~~-----~~--~~Gel~v~g~~~~~gY 995 (1140)
T PRK06814 935 ILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVPG-----ID--EGGRLFVRGPNVMLGY 995 (1140)
T ss_pred EEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecCC-----CC--CceEEEEeCCCcchhh
Confidence 99999999998765543210 11234789999988 788876431 12 6699999999999999
Q ss_pred cCChhhhh-hcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCce
Q 038104 404 LKNEEATS-QSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESP 482 (567)
Q Consensus 404 ~~~~~~~~-~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~ 482 (567)
+++++... +...+|||+|||+|++|+||.+++.||.||+||++|++|+|.+||+++.+++.+.+++|++++++..|+++
T Consensus 996 ~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~ 1075 (1140)
T PRK06814 996 LRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERI 1075 (1140)
T ss_pred cCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceE
Confidence 98765332 22358999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred eEEEEeecCCCCCCCCCCHHHHHHHHHhh-CCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhcc
Q 038104 483 CAFISVKTNSAGKTDDVNEADILSYCREN-LSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 483 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
++++. +. ..+.+++.+++++. ++.|++|..+++++++|+|++||++|++|+++..+....
T Consensus 1076 ~~~~~---~~-----~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 1136 (1140)
T PRK06814 1076 ILLTT---AS-----DATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAAK 1136 (1140)
T ss_pred EEEEc---CC-----CcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhcc
Confidence 76653 21 45678899999874 999999999999999999999999999999998886553
No 104
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-60 Score=495.74 Aligned_cols=485 Identities=27% Similarity=0.384 Sum_probs=396.6
Q ss_pred eEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhc
Q 038104 31 TSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHS 110 (567)
Q Consensus 31 ~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (567)
+++.+.+..+||.||.+.++++|++|.++|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 56666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEe
Q 038104 111 EAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNY 190 (567)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 190 (567)
++++++++......+.+....... ....++..+... .....|.+....... ......++.++++|
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~ 147 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA-----GVPLLLVVAGPV------PGFRSYEEALAAQPD----TPIADETAGADMLY 147 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc-----cccEEEEeCCCC------CccccHHHHHhcCCC----CCCCCCCcceEEEE
Confidence 999999998876666554332210 123333332211 122345544432211 11134567899999
Q ss_pred ccCCCCCCceEEechHHHHHHh------hHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCCHHHHH
Q 038104 191 TSGTTSAPKGVVYSHRGAYLST------LSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMY 264 (567)
Q Consensus 191 TSGtTG~pK~v~~~~~~l~~~~------~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 264 (567)
||||||.||+|.++|.++.... ...........++++++..|++|..++...+.++..|+++++.+.+++..++
T Consensus 148 TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (502)
T PRK08276 148 SSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEAL 227 (502)
T ss_pred CCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHH
Confidence 9999999999999887654322 1111122235678999999999999988777888899999988889999999
Q ss_pred HHHHhcCcceeecchHHHHHHHhcCCc--ccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCccccc
Q 038104 265 RNISQHRVTHMCCAPIVFNILLQAKPE--ERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCE 341 (567)
Q Consensus 265 ~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~ 341 (567)
+.++++++|.+.++|+++..++..... ....++++|.++++|++++.++.+.+. .++..+++.||+||++++++...
T Consensus 228 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 228 ALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecC
Confidence 999999999999999999999876532 234578999999999999999999998 46888999999999987655432
Q ss_pred cccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccC-Cccc
Q 038104 342 WQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKN-GWFR 420 (567)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-~~~~ 420 (567)
.+ .......+|.|+ .. .+++.|. ++.+++.+ +.|||+++|++++.||+++++.+...+.+ +||+
T Consensus 308 ~~----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 372 (502)
T PRK08276 308 ED----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVT 372 (502)
T ss_pred cc----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHhcCCCcee
Confidence 11 111224678888 65 8888885 56677766 78999999999999999999999988865 9999
Q ss_pred CCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCC
Q 038104 421 TGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVN 500 (567)
Q Consensus 421 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~ 500 (567)
|||+++++++|.+++.||.+|+++.+|.++++.+||.+|.++|+|.+++|++..++..|+.++++|+...+... ....
T Consensus 373 TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--~~~~ 450 (502)
T PRK08276 373 VGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADA--GDAL 450 (502)
T ss_pred ecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCC--Chhh
Confidence 99999999999999999999999999999999999999999999999999999999889999999998765411 1122
Q ss_pred HHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhh
Q 038104 501 EADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 501 ~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
.+.+++.++++++.+++|+.++++++||+|++||++|++|++.+.+-
T Consensus 451 ~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 451 AAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred HHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 35799999999999999999999999999999999999999997653
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.1e-61 Score=599.10 Aligned_cols=494 Identities=20% Similarity=0.225 Sum_probs=415.7
Q ss_pred CCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.++.++|.++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++|++|+|+++++++++++++||+++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCC
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDP 172 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (567)
|++|.++.+++.++++.+++++++++................. ....++..++.. .....
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------------~~~~~ 3858 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA----NRPRLLVWEEVQ----------------AGEVA 3858 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc----cccceeeecccc----------------ccccc
Confidence 9999999999999999999999999987765544443322110 112222222110 00111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 173 RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 173 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
...+.....+++.||++|||||||.||||+++|+++.+........++++++|+++...++.+..++..++.+++.|+++
T Consensus 3859 ~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l 3938 (4334)
T PRK05691 3859 SHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPLFGARV 3938 (4334)
T ss_pred ccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEE
Confidence 11122235678999999999999999999999999999998888889999999999999999999998899999999999
Q ss_pred eeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHh--CCeeecc
Q 038104 253 VCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELL--GFHVTHA 327 (567)
Q Consensus 253 ~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~i~~~ 327 (567)
++.+. .++..+++.++++++|++.++|+++..++... ...++++|.+++|||++++++.+.|.+. ++++++.
T Consensus 3939 ~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 4015 (4334)
T PRK05691 3939 EIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNA 4015 (4334)
T ss_pred EEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeC
Confidence 99874 47889999999999999999999999887542 3457789999999999999999999743 7899999
Q ss_pred ccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCCh
Q 038104 328 YGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNE 407 (567)
Q Consensus 328 yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 407 (567)
||+||++..++....... ........+|.|+++. .+.|.|. .+..+|.| ..|||+|+|+++++||+++|
T Consensus 4016 YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~v~~GY~~~~ 4084 (4334)
T PRK05691 4016 YGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTGVGRGYVGDP 4084 (4334)
T ss_pred ccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEecccccccccCCc
Confidence 999999877665432211 0111124689999998 8889884 67888888 88999999999999999999
Q ss_pred hhhhhccc--------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCC
Q 038104 408 EATSQSFK--------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWG 479 (567)
Q Consensus 408 ~~~~~~~~--------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (567)
+.|.++|. ++||+|||+|++++||.++++||.|++||++|++|.+.|||.+|.++|+|.+++|+... ...+
T Consensus 4085 ~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~ 4163 (4334)
T PRK05691 4085 LRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE-GVNG 4163 (4334)
T ss_pred ccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec-CCCC
Confidence 99999983 46999999999999999999999999999999999999999999999999998886554 4457
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
+.++++++...+... .....+++++++++.||.|++|..++++++||+|++||++|++|.+.
T Consensus 4164 ~~l~a~~~~~~~~~~--~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4164 KHLVGYLVPHQTVLA--QGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred cEEEEEEeCCccccc--chHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 788899887654311 12235779999999999999999999999999999999999999764
No 106
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.3e-61 Score=499.29 Aligned_cols=453 Identities=19% Similarity=0.218 Sum_probs=346.9
Q ss_pred cCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccc------hHHHHHHhhhhhccccCCCCCeE
Q 038104 71 APNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY------VQLAREALKLYFVEDRDAAGPRV 144 (567)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~~~i 144 (567)
+||++++++++|||+++|++++|+++.++.+++.++++.++++++|++... .+.+.++.... .. ..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~-~~ 72 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA-------PA-KA 72 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc-------cc-eE
Confidence 589999999999999999999999999999999999999999999998642 12222221110 11 22
Q ss_pred EEEeCCCCCCC--ccCCcccHHHHHhcCCC------CCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh
Q 038104 145 ILIDDIDSPTG--IRFGEFEYEQFVQMGDP------RFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI 216 (567)
Q Consensus 145 i~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~ 216 (567)
+.+........ .......|.++...... .........++++++++|||||||.||||.++|++++.......
T Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~ 152 (499)
T PLN03051 73 IVLPAAGEPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGW 152 (499)
T ss_pred EEEeccCcccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHH
Confidence 22221111000 00122356665522110 01111113457999999999999999999999999877665555
Q ss_pred hhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC-CCHHHHHHHHHhcCcceeecchHHHHHHHhcCC--ccc
Q 038104 217 LGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN-TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKP--EER 293 (567)
Q Consensus 217 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~ 293 (567)
..+++.++|++++.+|++|..++..++.+++.|+++++.+. +++..+++.|+++++|++.++|+++..|++... ...
T Consensus 153 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~ 232 (499)
T PLN03051 153 AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEG 232 (499)
T ss_pred HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccccc
Confidence 56778899999999999999998777888899999998874 688899999999999999999999999987542 234
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHH-h--CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecc
Q 038104 294 KEIASPVQILTGGAPPPASLLEEIEL-L--GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLAD 370 (567)
Q Consensus 294 ~~l~~l~~~~~~g~~l~~~~~~~~~~-~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 370 (567)
..++++|.+++||++++++..+++++ . ++++++.||+||++..++..... ......++|.|.++. .
T Consensus 233 ~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~~~~-~ 301 (499)
T PLN03051 233 LDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFSTASLGT-R 301 (499)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccCCCCCc-e
Confidence 56789999999999999999887775 3 37899999999987543321100 011134689999988 8
Q ss_pred eEEeeCCCCCCcCCCCcceeEEEEecCcc--chhccCChhhhhhcccCC----------cccCCceEEEecCCcEEEEcc
Q 038104 371 VDVKNLDTMSSVPRDGKTMGEIVLRGSSI--MKGYLKNEEATSQSFKNG----------WFRTGDVGVIHPDGYLEIKDR 438 (567)
Q Consensus 371 ~~i~~~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~~----------~~~TGD~~~~~~~g~l~~~GR 438 (567)
++|+|. ++.+++.|+++.|||+++||.+ +.||++++. + +.+.+| ||+|||+|++|+||++++.||
T Consensus 302 ~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~-~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR 378 (499)
T PLN03051 302 FVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-D-KVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGR 378 (499)
T ss_pred EEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-c-ceeeecCCccccCCcceeecCCeEEECCCCcEEEEec
Confidence 999985 5677777644689999999977 579998653 3 333344 689999999999999999999
Q ss_pred CCceeeeCceeechHHHHHHHHc-CCCceEEEEEeecCCCCC-CceeEEE---EeecCCCCCCCCCCHHHHHHHH----H
Q 038104 439 SKDVIISGGENISSVELENVLFR-HPRVLEAAVVAMPHPQWG-ESPCAFI---SVKTNSAGKTDDVNEADILSYC----R 509 (567)
Q Consensus 439 ~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~g-~~~~~~v---~~~~~~~~~~~~~~~~~l~~~~----~ 509 (567)
.||+||++|++|+|.|||++|.+ +|+|.+++|++++++..| +.++++| +.+++.. ..+.++|++++ +
T Consensus 379 ~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~----~~~~~~l~~~~~~~l~ 454 (499)
T PLN03051 379 ADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFD----QARPEALQKKFQEAIQ 454 (499)
T ss_pred cCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceeccccc----ccchHHHHHHHHHHHH
Confidence 99999999999999999999986 999999999999999988 6788888 6554421 23456666665 4
Q ss_pred hhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHhhhc
Q 038104 510 ENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAV 549 (567)
Q Consensus 510 ~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~~~~ 549 (567)
++++.|..|..|+++++||+|++||++|++|++++.+...
T Consensus 455 ~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 455 TNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELS 494 (499)
T ss_pred hhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhc
Confidence 5577766667899999999999999999999987766543
No 107
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-60 Score=509.71 Aligned_cols=499 Identities=19% Similarity=0.212 Sum_probs=378.7
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
.+.|+.++|+++++++||++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+
T Consensus 47 ~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 126 (624)
T PRK12582 47 YPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAM 126 (624)
T ss_pred cccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 47789999999999999999998743 689999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCCh-----HHHHHHHHhcCceEEEEcccc-hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCC
Q 038104 86 MAEAVLNTINVRLDA-----KNVASILRHSEAKVFFVDCQY-VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFG 159 (567)
Q Consensus 86 ~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 159 (567)
++|++++|++|.++. +++.++++.++++++|++... .......+.. ....++.++.... ...
T Consensus 127 ~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~----~~~ 194 (624)
T PRK12582 127 QAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL--------LDVTVVHVTGPGE----GIA 194 (624)
T ss_pred HcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh--------cCceEEEEcCCCc----ccc
Confidence 999999999999875 899999999999999997642 1111111111 1123344332111 112
Q ss_pred cccHHHHHhcCCCCCCC--CCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCC---CCEEEEecchH
Q 038104 160 EFEYEQFVQMGDPRFLP--EEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGS---APVYLWSLPMF 234 (567)
Q Consensus 160 ~~~~~~~~~~~~~~~~~--~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~---~d~~~~~~p~~ 234 (567)
...+.++.......... .....++++++++|||||||.||+|.++|+++..+............ .++++..+|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~ 274 (624)
T PRK12582 195 SIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWN 274 (624)
T ss_pred cccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHH
Confidence 34555555433221111 11245689999999999999999999999999877665544444443 57999999999
Q ss_pred hhhhHHH-HHHHHhhCceeeeeCC-CCH---HHHHHHHHhcCcceeecchHHHHHHHhcCCcc----cccCCCceEEEEc
Q 038104 235 HCNGWTF-TWGVAARGGTNVCLRN-TTA---YDMYRNISQHRVTHMCCAPIVFNILLQAKPEE----RKEIASPVQILTG 305 (567)
Q Consensus 235 ~~~g~~~-~~~~~~~g~~~~~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~l~~l~~~~~~ 305 (567)
|.+|+.. ++.++..|+++++.+. +.+ ..+++.++++++|++.++|.++..|+...... ...++++|.+++|
T Consensus 275 h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~g 354 (624)
T PRK12582 275 HTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYG 354 (624)
T ss_pred HHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEec
Confidence 9999865 4566778888877652 333 35677889999999999999999987643221 2346799999999
Q ss_pred CCCCCHHHHHHHHHh-------CCeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCC
Q 038104 306 GAPPPASLLEEIELL-------GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDT 378 (567)
Q Consensus 306 g~~l~~~~~~~~~~~-------~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~ 378 (567)
|+++++++.+.+.+. ++++++.||+||+++++...... ......+|+|+++. ++++++
T Consensus 355 Ga~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~i~~--- 419 (624)
T PRK12582 355 GATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV-ELKLAP--- 419 (624)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc-EEEEcc---
Confidence 999999999998853 36899999999998665432110 01235789999988 777753
Q ss_pred CCCcCCCCcceeEEEEecCccchhccCChhhhhhccc-CCcccCCceEEE-e---cCCcEEEEccCCceee-eCceeech
Q 038104 379 MSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK-NGWFRTGDVGVI-H---PDGYLEIKDRSKDVII-SGGENISS 452 (567)
Q Consensus 379 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~-~---~~g~l~~~GR~~d~i~-~~G~~v~~ 452 (567)
.| +.|||+++|++++.||+++++.+.+.|. +|||+|||+|++ | ++|.+++.||.+|+|+ .+|++|+|
T Consensus 420 -----~G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p 492 (624)
T PRK12582 420 -----VG--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSV 492 (624)
T ss_pred -----CC--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEech
Confidence 23 6799999999999999999999999984 899999999998 4 4699999999999999 68999999
Q ss_pred HHHH--HHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCC-----CCC----CCCCCHHHHHHHHHhhC-------CC
Q 038104 453 VELE--NVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNS-----AGK----TDDVNEADILSYCRENL-------SR 514 (567)
Q Consensus 453 ~~iE--~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-----~~~----~~~~~~~~l~~~~~~~l-------~~ 514 (567)
.+|| .++.++|.|.+++|++++++..| +.|++.... ... ....+.+++.+++++.+ +.
T Consensus 493 ~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 568 (624)
T PRK12582 493 GTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGG 568 (624)
T ss_pred HHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCC
Confidence 8885 68889999999999999887655 333321110 000 00113345666665544 44
Q ss_pred Cc-cccEEEEeCCCC------CCCCCccchHHHHHHHHhhh
Q 038104 515 FM-VPKKVVILPELP------KTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 515 ~~-~p~~i~~v~~~P------~t~~GKv~r~~l~~~~~~~~ 548 (567)
+. +|.++.+++++| +|++||++|+...+.|++..
T Consensus 569 ~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i 609 (624)
T PRK12582 569 SSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALV 609 (624)
T ss_pred ChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHH
Confidence 44 999999998876 56788899999998888743
No 108
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=8.5e-61 Score=595.20 Aligned_cols=485 Identities=19% Similarity=0.263 Sum_probs=412.6
Q ss_pred CCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 11 YVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..+.++.++|.++++.+|+++|+++.+.++||+||.++++++|+.|.++|+++|++|+|+++++++++++++||+++|++
T Consensus 1128 ~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1128 PAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGA 1207 (4334)
T ss_pred CccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcC
Q 038104 91 LNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMG 170 (567)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
++|++|.++.+++.++++.++++++|++......+... .....+.++..... .
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~~~~~~~~----------------~ 1260 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA-----------EGVSAIALDSLHLD----------------S 1260 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc-----------cCceEEeecccccc----------------c
Confidence 99999999999999999999999999987654432211 11122222211000 0
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCc
Q 038104 171 DPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGG 250 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~ 250 (567)
.....+.....++++++++|||||||.||||.++|+++..........++++++|+++...|++|..++..++.++..|+
T Consensus 1261 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~ 1340 (4334)
T PRK05691 1261 WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWPLITGC 1340 (4334)
T ss_pred cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCC
Confidence 00111112245689999999999999999999999999988888888889999999999999999888888899999999
Q ss_pred eeeeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHH-h-CCeee
Q 038104 251 TNVCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIEL-L-GFHVT 325 (567)
Q Consensus 251 ~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~-~-~~~i~ 325 (567)
++++.+. .++..+++.++++++|++.++|+++..+..... ...++++|.+++|||++++++.+.|.. + +++++
T Consensus 1341 ~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~ 1418 (4334)
T PRK05691 1341 RLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLH 1418 (4334)
T ss_pred EEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEE
Confidence 9999753 588899999999999999999999999976432 346789999999999999999999984 4 68999
Q ss_pred ccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccC
Q 038104 326 HAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLK 405 (567)
Q Consensus 326 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 405 (567)
+.||+||++..++....... ......+|+|+++. .++|+|. .+..++.| +.|||+++|+++++||++
T Consensus 1419 n~YG~TE~~~~~~~~~~~~~---------~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~GYl~ 1485 (4334)
T PRK05691 1419 NRYGPTETAINVTHWQCQAE---------DGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGELCIGGAGLARGYLG 1485 (4334)
T ss_pred eCCCcChheeeeeeeecccc---------cCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceEEEecCcccchhhcC
Confidence 99999999866554221100 01124689999998 8899886 57788887 889999999999999999
Q ss_pred Chhhhhhccc--------CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCC
Q 038104 406 NEEATSQSFK--------NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQ 477 (567)
Q Consensus 406 ~~~~~~~~~~--------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 477 (567)
+|+.|.+.|. .+||+|||+|++++||.++++||.|++||++|++|+|.+||.+|.++|+|.+++|++.++.
T Consensus 1486 ~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~- 1564 (4334)
T PRK05691 1486 RPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA- 1564 (4334)
T ss_pred CccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-
Confidence 9999999883 2499999999999999999999999999999999999999999999999999999876554
Q ss_pred CCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHH
Q 038104 478 WGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRAL 543 (567)
Q Consensus 478 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~ 543 (567)
.|..++++++...+. ..+.++|+++++++||.|++|..++++++||+|++||++|++|.+.
T Consensus 1565 ~~~~lva~~~~~~~~-----~~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1565 AGAQLVGYYTGEAGQ-----EAEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CCCEEEEEEEeCCCC-----CCCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 467889988876554 4567899999999999999999999999999999999999999754
No 109
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-60 Score=504.90 Aligned_cols=507 Identities=20% Similarity=0.274 Sum_probs=377.7
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCC---------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHh
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEG---------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAV 84 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~ 84 (567)
||+.++|++++..+|+++|+++.+ +++||+||.+++.++|++|.+.| ++||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578899999999999999998632 68999999999999999999999 68999999999999999999999
Q ss_pred hhccceeeeccC---CCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcc
Q 038104 85 PMAEAVLNTINV---RLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEF 161 (567)
Q Consensus 85 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 161 (567)
+++|++++|+++ ..+.+++.++++.+++++++++.+..+.+.+........ ....++..+....
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------- 146 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ----SAPPVIEVDLLDL--------- 146 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc----cccceEeeccccc---------
Confidence 999999999997 457899999999999999999988776665543211100 1122332221100
Q ss_pred cHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhc-c-----CCCCCEEEEecchHh
Q 038104 162 EYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGW-E-----MGSAPVYLWSLPMFH 235 (567)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~-~-----~~~~d~~~~~~p~~~ 235 (567)
.. .... .......+++++++|||||||.||+|.++|++++.++......+ . ...++++++.+|++|
T Consensus 147 -----~~--~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 218 (578)
T PRK05850 147 -----DS--PRGS-DARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYH 218 (578)
T ss_pred -----cc--CCcc-ccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCC
Confidence 00 0000 11124567999999999999999999999999987765544322 2 356789999999999
Q ss_pred hhhHHH-HHHHHhhCceeeeeCCC----CHHHHHHHHHhcCcceeecchHHH-HHHHhcCCc---ccccCCCceEEEEcC
Q 038104 236 CNGWTF-TWGVAARGGTNVCLRNT----TAYDMYRNISQHRVTHMCCAPIVF-NILLQAKPE---ERKEIASPVQILTGG 306 (567)
Q Consensus 236 ~~g~~~-~~~~~~~g~~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~-~~l~~~~~~---~~~~l~~l~~~~~~g 306 (567)
..|+.. ++.+++.|+++++.+.. ++..+++.++++++++. .+|..+ ..+...... ....++++|.+++||
T Consensus 219 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg 297 (578)
T PRK05850 219 DMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGS 297 (578)
T ss_pred CchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECc
Confidence 999865 77788899998888642 68899999999999865 556554 333332111 123567899999999
Q ss_pred CCCCHHHHHHHH-Hh---C---CeeeccccccccCCCccccccccccC--CCCCchh------------hhhccccCcee
Q 038104 307 APPPASLLEEIE-LL---G---FHVTHAYGLTEATGPALVCEWQSSWN--QLPKPDQ------------AKLKARQGISI 365 (567)
Q Consensus 307 ~~l~~~~~~~~~-~~---~---~~i~~~yG~tE~~~~~~~~~~~~~~~--~~~~~~~------------~~~~~~~G~~~ 365 (567)
+++++++.+++. .+ + ..+++.||+||++..+.......... ....... .......|.|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~ 377 (578)
T PRK05850 298 ERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR 377 (578)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC
Confidence 999999998887 34 2 36899999999875444322110000 0000000 00011223332
Q ss_pred eeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhccc------------CCcccCCceEEEecCCcE
Q 038104 366 LTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFK------------NGWFRTGDVGVIHPDGYL 433 (567)
Q Consensus 366 ~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~~~~~TGD~~~~~~~g~l 433 (567)
+ ..++++|.+++.+++.+ +.|||+++|++++.||+++++.+.+.|. ++||+|||+|+++ +|++
T Consensus 378 -~-~~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l 452 (578)
T PRK05850 378 -S-PTVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGEL 452 (578)
T ss_pred -C-CEEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEE
Confidence 2 37888887677778777 8899999999999999999999998883 4799999999998 9999
Q ss_pred EEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCC-CCHHHHHHHHHhhC
Q 038104 434 EIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDD-VNEADILSYCRENL 512 (567)
Q Consensus 434 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~-~~~~~l~~~~~~~l 512 (567)
++.||.+|+|+++|++|+|.+||.+|.++|.+ +++|++++++ .++.++++|+++.+....... .....+++.+.+.+
T Consensus 453 ~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l 530 (578)
T PRK05850 453 FIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAI 530 (578)
T ss_pred EEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999985 5888888887 688899999887653110000 01345666665555
Q ss_pred CC--CccccEEEEeC--CCCCCCCCccchHHHHHHHHhhhcc
Q 038104 513 SR--FMVPKKVVILP--ELPKTATGKIQKFQLRALAKNFAVS 550 (567)
Q Consensus 513 ~~--~~~p~~i~~v~--~~P~t~~GKv~r~~l~~~~~~~~~~ 550 (567)
.. ...|..+.++. .||+|++||++|++|++++.+...+
T Consensus 531 ~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~ 572 (578)
T PRK05850 531 SKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFT 572 (578)
T ss_pred HHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCcc
Confidence 42 23566666664 7999999999999999998775433
No 110
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-60 Score=475.70 Aligned_cols=517 Identities=24% Similarity=0.300 Sum_probs=414.4
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCC--------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHH
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEG--------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMH 81 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 81 (567)
.....|+++.|++.+..+|+.+++-... +.+||.|.++++..++..|...|+++++.|+|+.-|++||++..
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 3467899999999999999999997632 68999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEc-ccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC-----C
Q 038104 82 FAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVD-CQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT-----G 155 (567)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~ 155 (567)
+||...|.+.||+..+++++.+.++++.+.+.+++++ ++....+.+...... .+.++.++.+++..... .
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~----~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDS----LPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhccccc----CccceeEEEecCCchhhhhhhhc
Confidence 9999999999999999999999999999999999999 555555555443211 11678899888764332 2
Q ss_pred ccCCcccHHHHHhcCCCCCCCC-CCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh---hhc---cCCCCCEEE
Q 038104 156 IRFGEFEYEQFVQMGDPRFLPE-EIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI---LGW---EMGSAPVYL 228 (567)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~---~~~---~~~~~d~~~ 228 (567)
......+|.++...+......+ ....+++.|.|.|||||||.||||++||+|++..+.... ... .....|+++
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 2244899999999886555544 467889999999999999999999999999988554322 111 223469999
Q ss_pred EecchHhhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCc----c------------
Q 038104 229 WSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPE----E------------ 292 (567)
Q Consensus 229 ~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~------------ 292 (567)
+++|+.|++...+....+..|+.+.+.. .++..+.+.|++.+||.+.++|.+|+++-+...+ .
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999888777778888887776 6888888889999999999999999887542110 0
Q ss_pred ----------cc------------------c-CCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCcccccc
Q 038104 293 ----------RK------------------E-IASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPALVCEW 342 (567)
Q Consensus 293 ----------~~------------------~-l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~~~~~~ 342 (567)
+. . -..+|.+++|++|+++++...++ .++++|.+.||+||+.+.++....
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~ 465 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLP 465 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccC
Confidence 00 0 13678899999999999999999 568999999999999955554321
Q ss_pred ccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcc-cCCcccC
Q 038104 343 QSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSF-KNGWFRT 421 (567)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~T 421 (567)
.+. ...++|.|+++. +++++|..+.+.-+.+ ..||||++|++++.||+++|+.|.+.+ ++||++|
T Consensus 466 ----------~d~-~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhT 531 (691)
T KOG1256|consen 466 ----------GDN-VLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHT 531 (691)
T ss_pred ----------CCC-CCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccccccc
Confidence 111 457899999999 9999998777777766 469999999999999999999999999 5999999
Q ss_pred CceEEEecCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCC---
Q 038104 422 GDVGVIHPDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTD--- 497 (567)
Q Consensus 422 GD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~--- 497 (567)
||+|+++++|.+.+.||++++|| ..|+.|.|..||++..+.+.|.+.+|.+-+.. ..++++|++.+.......
T Consensus 532 GDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~~~ 608 (691)
T KOG1256|consen 532 GDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAAKD 608 (691)
T ss_pred ccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHHHc
Confidence 99999999999999999999999 88999999999999999999999999876543 368899888665432100
Q ss_pred CCC------------H----HHHHHHHH-hhCCCCccccEEEEeCC---C---CCCCCCccchHHHHHHHHhhh
Q 038104 498 DVN------------E----ADILSYCR-ENLSRFMVPKKVVILPE---L---PKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 498 ~~~------------~----~~l~~~~~-~~l~~~~~p~~i~~v~~---~---P~t~~GKv~r~~l~~~~~~~~ 548 (567)
... . +++.+.-+ +.+..+.....+.+... + -.|||-|++|..|.+.|++..
T Consensus 609 ~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~I 682 (691)
T KOG1256|consen 609 GVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQI 682 (691)
T ss_pred cCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHH
Confidence 000 0 11222211 23555666666665431 2 358999999999999999864
No 111
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=4.1e-60 Score=486.98 Aligned_cols=436 Identities=29% Similarity=0.465 Sum_probs=368.9
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEccc
Q 038104 41 NWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQ 120 (567)
Q Consensus 41 Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (567)
||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++++++.++.+.+..+++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred chHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCce
Q 038104 121 YVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKG 200 (567)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~ 200 (567)
..... +.. ..+..+................+++++++|||||||.||+
T Consensus 81 ~~~~~-------------------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKD-------------------FQA-------------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccc-------------------eee-------------cchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 32100 000 0011111111111111122456789999999999999999
Q ss_pred EEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchH
Q 038104 201 VVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPI 280 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~ 280 (567)
|.++|+++...+......++++++|+++..+|++|.+++..++.++..|+++++.+.+ ..+++.++++++|++.++|+
T Consensus 129 v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~ 206 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPT 206 (436)
T ss_pred EEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHH
Confidence 9999999998888888888999999999999999999998888889999998887655 38999999999999999999
Q ss_pred HHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccCCCccccccccccCCCCCchhhhhccc
Q 038104 281 VFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKAR 360 (567)
Q Consensus 281 ~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (567)
++..++...... ++++.++++|+++++++.+.+...++++++.||+||++..++...... ......
T Consensus 207 ~l~~l~~~~~~~----~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~ 272 (436)
T TIGR01923 207 QLNRLLDEGGHN----ENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM----------LHARPD 272 (436)
T ss_pred HHHHHHhCcCCC----CceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc----------cccccC
Confidence 999998765322 689999999999999999998888999999999999987665432110 011123
Q ss_pred cCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCC
Q 038104 361 QGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSK 440 (567)
Q Consensus 361 ~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~ 440 (567)
+|.|+++. .+++.+.+. + +.|||+++|+.++.||+++++.+...+.++||+|||++++++||.+++.||.+
T Consensus 273 ~G~~~~~~-~~~i~~~~~------~--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~ 343 (436)
T TIGR01923 273 VGRPLAGR-EIKIKVDNK------E--GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRD 343 (436)
T ss_pred CCccCCCc-EEEEEeCCC------C--CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEecccc
Confidence 78888887 777743322 1 56999999999999999988888777778999999999999999999999999
Q ss_pred ceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccE
Q 038104 441 DVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKK 520 (567)
Q Consensus 441 d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~ 520 (567)
|+++++|.++++.+||++|.+++.|.+++|++.++...|..+++++.... ..+.+++.+++++.++.|++|..
T Consensus 344 d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~-------~~~~~~l~~~l~~~l~~~~~p~~ 416 (436)
T TIGR01923 344 DLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSES-------DISQAKLIAYLTEKLAKYKVPIA 416 (436)
T ss_pred CeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECC-------CCCHHHHHHHHHHhhhCCCCCeE
Confidence 99999999999999999999999999999999988877888888887654 24678899999999999999999
Q ss_pred EEEeCCCCCCCCCccchHHH
Q 038104 521 VVILPELPKTATGKIQKFQL 540 (567)
Q Consensus 521 i~~v~~~P~t~~GKv~r~~l 540 (567)
++++++||+|++||++|++|
T Consensus 417 i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 417 FEKLDELPYNASGKILRNQL 436 (436)
T ss_pred EEEecCCCCCCCCceecccC
Confidence 99999999999999999875
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-59 Score=498.14 Aligned_cols=499 Identities=20% Similarity=0.282 Sum_probs=389.2
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCC---eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEG---ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
.|+.++++..++.+|+.+++...+ +.+||+||+.++.++|.+|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 489999999999988666553332 67999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCC-------hHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccH
Q 038104 91 LNTINVRLD-------AKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEY 163 (567)
Q Consensus 91 ~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 163 (567)
++++++..+ .+++.++++.+++++++++....+.+.+..... ..+... .+
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~---------~~~~~~--------------~~ 157 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN---------PLLHVL--------------SH 157 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc---------ccccee--------------eh
Confidence 999986432 588999999999999999988766655543111 111111 11
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh-hccCCCCCEEEEecchHhhhhHHH-
Q 038104 164 EQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL-GWEMGSAPVYLWSLPMFHCNGWTF- 241 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~-~~~~~~~d~~~~~~p~~~~~g~~~- 241 (567)
.++....... .......++++++++|||||||.||+|.++|++++.+...... .+++.++|+++..+|++|.+|+..
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 236 (579)
T PRK09192 158 AWFKALPEAD-VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGF 236 (579)
T ss_pred hhhcccCCCc-cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHH
Confidence 2211111111 1112245678999999999999999999999999988877766 788999999999999999999875
Q ss_pred HHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCC---cccccCCCceEEEEcCCCCCHHHH
Q 038104 242 TWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKP---EERKEIASPVQILTGGAPPPASLL 314 (567)
Q Consensus 242 ~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~l~~~~~~g~~l~~~~~ 314 (567)
++.++..|+++++.+. .++..+++.+.+++++++...|..+..+..... .....++++|.+++||+++++.+.
T Consensus 237 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~ 316 (579)
T PRK09192 237 LLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVL 316 (579)
T ss_pred HHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHH
Confidence 5566778888877652 267889999999999987776655555443221 122467899999999999999999
Q ss_pred HHHHH-h---C---CeeeccccccccCCCccccccccccC--------------CCC---CchhhhhccccCceeeeecc
Q 038104 315 EEIEL-L---G---FHVTHAYGLTEATGPALVCEWQSSWN--------------QLP---KPDQAKLKARQGISILTLAD 370 (567)
Q Consensus 315 ~~~~~-~---~---~~i~~~yG~tE~~~~~~~~~~~~~~~--------------~~~---~~~~~~~~~~~G~~~~~~~~ 370 (567)
+.+.+ + + ..+++.||+||+++.++......... ... ..........+|.++++. .
T Consensus 317 ~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~-~ 395 (579)
T PRK09192 317 HQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGH-E 395 (579)
T ss_pred HHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCc-E
Confidence 88874 3 2 24899999999987665432211100 000 000001124679999998 8
Q ss_pred eEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcc-cCCcccCCceEEEecCCcEEEEccCCceeeeCcee
Q 038104 371 VDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSF-KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGEN 449 (567)
Q Consensus 371 ~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 449 (567)
++++|. ++..++.+ +.|||+++|+.++.||+++ ..+.+.+ .++||+|||+|++ ++|.+++.||.+|+|+++|++
T Consensus 396 v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~ 470 (579)
T PRK09192 396 IEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRN 470 (579)
T ss_pred EEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCc
Confidence 999985 46677766 8899999999999999999 4555554 4899999999999 899999999999999999999
Q ss_pred echHHHHHHHHcCCCce--EEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCC-CCccccEEEEeC-
Q 038104 450 ISSVELENVLFRHPRVL--EAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLS-RFMVPKKVVILP- 525 (567)
Q Consensus 450 v~~~~iE~~l~~~~~v~--~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~-~~~~p~~i~~v~- 525 (567)
|+|.+||++|.++|+|. +++|++++++. +++++++++...+. ..+.++|.+++++.+. .+++|..+.++.
T Consensus 471 v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~-----~~~~~~l~~~~~~~l~~~~~~~~~i~~~~~ 544 (579)
T PRK09192 471 IWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISD-----EERRGQLIHALAALVRSEFGVEAAVELVPP 544 (579)
T ss_pred cCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCC-----hHHHHHHHHHHHHHHHHHhCCCceEEEeCC
Confidence 99999999999999998 89999998875 55777887765443 4466789999998874 688998888885
Q ss_pred -CCCCCCCCccchHHHHHHHHhhh
Q 038104 526 -ELPKTATGKIQKFQLRALAKNFA 548 (567)
Q Consensus 526 -~~P~t~~GKv~r~~l~~~~~~~~ 548 (567)
+||+|.+||++|++|++++....
T Consensus 545 ~~lP~t~~GKv~R~~l~~~~~~~~ 568 (579)
T PRK09192 545 HSLPRTSSGKLSRAKAKKRYLSGA 568 (579)
T ss_pred CCcCCCCCcchhHHHHHHHHHcCC
Confidence 89999999999999999988743
No 113
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=7.3e-59 Score=443.44 Aligned_cols=516 Identities=22% Similarity=0.265 Sum_probs=411.2
Q ss_pred cCCCCCHHHHHHHHHHHcCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhc
Q 038104 10 NYVPLSPLTFLKRAAAVYGNRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMA 87 (567)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~ 87 (567)
+-...|+.++|.++++++|+++|+++.+ +.+||+|+.+.++++|+.|+..|++.||+|+++|+|.++|+++.|+++++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 3467799999999999999999999987 69999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHH
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFV 167 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
|++...||++...+.|.|.+..++++++|++.+..+.+.++.+.+.. ..-.++..+....+ .+..+....+
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~-----~~i~~~~~~~~~~~----~g~~~L~~~l 223 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIK-----NGIHVFSLGPTSVP----DGIESLLAKL 223 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhh-----ccceEEecCCCCCC----chHHHHHHhh
Confidence 99999999999999999999999999999999999888887444321 22334433332222 2334455555
Q ss_pred hcCCCCCCCC---CCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HH
Q 038104 168 QMGDPRFLPE---EIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TW 243 (567)
Q Consensus 168 ~~~~~~~~~~---~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~ 243 (567)
.....++.|. ...+-.++++.+|||||||.||+.+++|...+..+......++++++|+++..+|++|+.|... +.
T Consensus 224 ~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~ 303 (649)
T KOG1179|consen 224 SAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIG 303 (649)
T ss_pred cccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHH
Confidence 5555554342 2345568999999999999999999999999888887888999999999999999999998765 67
Q ss_pred HHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCC
Q 038104 244 GVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGF 322 (567)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~ 322 (567)
.++..|+|+++-.+++...+|+.+.+|++|+....-.+++.|++.+......-+.+|..+ |..+-+++++.+. .+|+
T Consensus 304 ~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~ 381 (649)
T KOG1179|consen 304 GCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGI 381 (649)
T ss_pred HHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCC
Confidence 788899999999999999999999999999999999999999999887777766776444 5556666776666 7875
Q ss_pred -eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCC----------CcCCCCcceeE
Q 038104 323 -HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMS----------SVPRDGKTMGE 391 (567)
Q Consensus 323 -~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~----------~~~~~~~~~Ge 391 (567)
+|.+.||+||.....+.....-+.....+ .....+.+. ...-.|.+++. ++++| |.|.
T Consensus 382 ~~IgE~YgaTEgn~~~~N~d~~vGA~G~~~--------~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~~G--EpGl 450 (649)
T KOG1179|consen 382 IKIGEFYGATEGNSNLVNYDGRVGACGFMS--------RLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCPPG--EPGL 450 (649)
T ss_pred CeEEEEeccccCcceeeeecCccccccchh--------hhhhhccce-EEEEecCCCCceeecCCceEEECCCC--CCce
Confidence 59999999999765554322211111110 111111122 22222333333 23344 7786
Q ss_pred EEEe--cCcc---chhccCChhhhhhc-----cc--CCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHH
Q 038104 392 IVLR--GSSI---MKGYLKNEEATSQS-----FK--NGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVL 459 (567)
Q Consensus 392 l~v~--~~~~---~~gy~~~~~~~~~~-----~~--~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (567)
++-+ ..+. +.||.+....+.+. |+ |-||+|||+-.+|+.|++||.+|..|.++..|++|+..|||+.|
T Consensus 451 Lv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l 530 (649)
T KOG1179|consen 451 LVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVL 530 (649)
T ss_pred EEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHH
Confidence 6433 2333 88999977666555 33 45999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEEEeecCCC-CCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchH
Q 038104 460 FRHPRVLEAAVVAMPHPQ-WGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKF 538 (567)
Q Consensus 460 ~~~~~v~~~~v~~~~~~~-~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~ 538 (567)
..+..+.|+.|.|+.-|. .|..-.|.|+..+.. +.+...+.+++++.||+|++|..+.+.+++++|.+-|.++.
T Consensus 531 ~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~-----~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~ 605 (649)
T KOG1179|consen 531 SALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTT-----EKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKT 605 (649)
T ss_pred hhhccccceeEEEEecCCccCccceEEEEecCcc-----cchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHH
Confidence 999999999999987653 355566777766665 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccc
Q 038104 539 QLRALAKNFAVSKD 552 (567)
Q Consensus 539 ~l~~~~~~~~~~~~ 552 (567)
.|.+...+.....|
T Consensus 606 ~L~~egf~p~~~~d 619 (649)
T KOG1179|consen 606 ELQKEGFNPAIISD 619 (649)
T ss_pred HHHHccCCccccCC
Confidence 99988766544443
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.6e-58 Score=482.52 Aligned_cols=495 Identities=22% Similarity=0.255 Sum_probs=380.6
Q ss_pred CHHHHHHHHHHHcCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
++.+.+.+.|..+|+.+++...+ +.+||.||+++++++|++|.++|+++||+|+|+++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888999999999999996654 6899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHH-------HHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHH
Q 038104 93 TINVRLDAKNV-------ASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQ 165 (567)
Q Consensus 93 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 165 (567)
++++..+.+++ .++++.++++.++++......+..... ....+ ..+.+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~----------------~~~~~ 137 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE---------KGIRV----------------LTVAD 137 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc---------cCCce----------------eehhh
Confidence 99998776544 456777899999998765443322110 01111 22333
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCC-CEEEEecchHhhhhHHH-HH
Q 038104 166 FVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSA-PVYLWSLPMFHCNGWTF-TW 243 (567)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~-d~~~~~~p~~~~~g~~~-~~ 243 (567)
+...... ......++++++++|||||||.||+|.++|++++..+......+++.++ |+++..+|++|..++.. +.
T Consensus 138 l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 138 LLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred hcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 3322211 1123456899999999999999999999999998888777777788876 89999999999999875 55
Q ss_pred HHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcC----CcccccCCCceEEEEcCCCCCHHHHH
Q 038104 244 GVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAK----PEERKEIASPVQILTGGAPPPASLLE 315 (567)
Q Consensus 244 ~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~----~~~~~~l~~l~~~~~~g~~l~~~~~~ 315 (567)
.++..|++++++.. .++..+++.+++++++++.+.|..+..+.... ......++++|.++++|++++++..+
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~ 294 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVE 294 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHH
Confidence 66788888888754 26778899999999999988887776665432 11235678999999999999999999
Q ss_pred HHHH----hCC---eeeccccccccCCCccccccccccCC--------------CC-CchhhhhccccCceeeeecceEE
Q 038104 316 EIEL----LGF---HVTHAYGLTEATGPALVCEWQSSWNQ--------------LP-KPDQAKLKARQGISILTLADVDV 373 (567)
Q Consensus 316 ~~~~----~~~---~i~~~yG~tE~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~G~~~~~~~~~~i 373 (567)
.+.+ ++. .+++.||+||++..++....+..... .+ ..........+|.|.++. .+++
T Consensus 295 ~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~~~i 373 (545)
T PRK07768 295 DLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGL-EVRV 373 (545)
T ss_pred HHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCC-EEEE
Confidence 8874 344 49999999999876554332211000 00 000012235789999998 8999
Q ss_pred eeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCCcEEEEccCCceeeeCceeechH
Q 038104 374 KNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSV 453 (567)
Q Consensus 374 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 453 (567)
++. ++.+++.+ +.|||+++|+.++.||++.+........+|||+|||+++++++|.++++||++|+++.+|.+++|.
T Consensus 374 ~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 450 (545)
T PRK07768 374 VDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPT 450 (545)
T ss_pred ECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHH
Confidence 984 56777766 789999999999999998766555545688999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceEEEEEeecC--CCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCC--ccccEEEEeC--CC
Q 038104 454 ELENVLFRHPRVLEAAVVAMPH--PQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRF--MVPKKVVILP--EL 527 (567)
Q Consensus 454 ~iE~~l~~~~~v~~~~v~~~~~--~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~--~~p~~i~~v~--~~ 527 (567)
+||..|.++|+|.+++|+++.. ...++..+++++..... ......++.+++++.+..+ ..|..+.+++ +|
T Consensus 451 eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~l 526 (545)
T PRK07768 451 DIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE----DPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSI 526 (545)
T ss_pred HHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc----cHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcC
Confidence 9999999999999988777643 33344444444332221 1223345677777766543 5788888886 89
Q ss_pred CCCCCCccchHHHHHHHH
Q 038104 528 PKTATGKIQKFQLRALAK 545 (567)
Q Consensus 528 P~t~~GKv~r~~l~~~~~ 545 (567)
|+|++||++|+.|++++.
T Consensus 527 P~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 527 PKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCCCchhHHHHHHHHhcC
Confidence 999999999999998764
No 115
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-58 Score=437.21 Aligned_cols=515 Identities=23% Similarity=0.335 Sum_probs=420.4
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEeC------------C-----------eeeeHHHHHHHHHHHHHHHHhCCCCCCCE-E
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIYE------------G-----------ARFNWLQTYDRCRRLASSLRSLNMPKHSV-V 67 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~el~~~v~~la~~L~~~g~~~gd~-V 67 (567)
.-.|+.+++.+.++.+.++.++-.. + ..+||.|+.+++.++|++|.+.|++++++ +
T Consensus 39 g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~ 118 (678)
T KOG1180|consen 39 GASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKI 118 (678)
T ss_pred CcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 3458999999999999999998541 1 56999999999999999999999998776 9
Q ss_pred EEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEE
Q 038104 68 SVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILI 147 (567)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 147 (567)
+|+++.+.+|+++++||++-+..+|.+..++..+.+.|-|++++++.||++.+.++.+...++... ..+.||..
T Consensus 119 ~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~------~vk~II~~ 192 (678)
T KOG1180|consen 119 AIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK------TVKHIIYF 192 (678)
T ss_pred EEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC------ceeEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998888877665 67888888
Q ss_pred eCCCCCC---C------ccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhh
Q 038104 148 DDIDSPT---G------IRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILG 218 (567)
Q Consensus 148 ~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~ 218 (567)
+..+... . ......+|++++..+.....++.++.++|+|+|||||||||.||||+++|+|+++........
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~ 272 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGEN 272 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhccc
Confidence 8532211 1 235678999999999888766666688999999999999999999999999999988887766
Q ss_pred c-cCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCCHHH--------HHHHHHhcCcceeecchHHHHHHHhcC
Q 038104 219 W-EMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYD--------MYRNISQHRVTHMCCAPIVFNILLQAK 289 (567)
Q Consensus 219 ~-~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~i~~~~~t~l~~~p~~~~~l~~~~ 289 (567)
. .+++.|+++.++|+.|..-+.+=+.++..|+.+-.-+..+... ---.+..++||++.++|.+++++....
T Consensus 273 v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgV 352 (678)
T KOG1180|consen 273 VPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGV 352 (678)
T ss_pred CcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHH
Confidence 5 6899999999999999999998888999898876654322211 112345689999999999998775431
Q ss_pred Ccc------------------------------------------cccCCCceEEEEcCCCCCHHHHHHHHH-hCCeeec
Q 038104 290 PEE------------------------------------------RKEIASPVQILTGGAPPPASLLEEIEL-LGFHVTH 326 (567)
Q Consensus 290 ~~~------------------------------------------~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~ 326 (567)
..+ ...-..+|.+++||++++++..+++.- +.+++..
T Consensus 353 l~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~q 432 (678)
T KOG1180|consen 353 LSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQ 432 (678)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccc
Confidence 100 001248899999999999999999995 4779999
Q ss_pred cccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCC
Q 038104 327 AYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKN 406 (567)
Q Consensus 327 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 406 (567)
.||.||+++..+..... ......+|.|++.. +++++|.+++...+.++.-.||||++|++++.||+++
T Consensus 433 GYGLTEtca~~tv~e~~-----------d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn 500 (678)
T KOG1180|consen 433 GYGLTETCAAATVLEPE-----------DFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKN 500 (678)
T ss_pred cccccchhcccEecChh-----------hcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCC
Confidence 99999999887764311 11124789999888 9999999888877777656799999999999999999
Q ss_pred hhhhhhccc--CC--cccCCceEEEecCCcEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCc
Q 038104 407 EEATSQSFK--NG--WFRTGDVGVIHPDGYLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGES 481 (567)
Q Consensus 407 ~~~~~~~~~--~~--~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (567)
++.|.+.|. +| ||+|||+|++++||++.+.+|++|.+| -+|+.|+++-+|.+++..|.|...+|.+.... ..
T Consensus 501 ~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s~ 577 (678)
T KOG1180|consen 501 EEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---SK 577 (678)
T ss_pred hhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---ce
Confidence 999999994 78 999999999999999999999999999 89999999999999999999999999886554 36
Q ss_pred eeEEEEeecCCCC-----CCCCC-CH--------------HHHHHHH-HhhCCCCccccEEEEeCC-C-C----CCCCCc
Q 038104 482 PCAFISVKTNSAG-----KTDDV-NE--------------ADILSYC-RENLSRFMVPKKVVILPE-L-P----KTATGK 534 (567)
Q Consensus 482 ~~~~v~~~~~~~~-----~~~~~-~~--------------~~l~~~~-~~~l~~~~~p~~i~~v~~-~-P----~t~~GK 534 (567)
++++|++..+.-. .+... +- +++.++- +++|..+.+|..|++.++ + | .|..-|
T Consensus 578 ~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~K 657 (678)
T KOG1180|consen 578 PVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALK 657 (678)
T ss_pred eEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHH
Confidence 8999988754211 01111 00 1222222 346888899999998664 2 4 345679
Q ss_pred cchHHHHHHHHhh
Q 038104 535 IQKFQLRALAKNF 547 (567)
Q Consensus 535 v~r~~l~~~~~~~ 547 (567)
++|+.++..|++-
T Consensus 658 LKRk~I~~~~k~e 670 (678)
T KOG1180|consen 658 LKRKEILAAYKKE 670 (678)
T ss_pred hhHHHHHHHHHHH
Confidence 9999999988763
No 116
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-57 Score=460.58 Aligned_cols=406 Identities=19% Similarity=0.230 Sum_probs=350.6
Q ss_pred EEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcC
Q 038104 32 SIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSE 111 (567)
Q Consensus 32 a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (567)
++++.++++||.||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+.+..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46778899999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEec
Q 038104 112 AKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYT 191 (567)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T 191 (567)
++.++++.... . ... .....++++++++||
T Consensus 80 ~~~~i~~~~~~-----------------~------~~~---------------------------~~~~~~~~~~~i~~T 109 (414)
T PRK08308 80 CHGLLYGESDF-----------------T------KLE---------------------------AVNYLAEEPSLLQYS 109 (414)
T ss_pred CCEEEecCccc-----------------c------ccc---------------------------CCCCCCCCceEEEEC
Confidence 99999865210 0 000 001345689999999
Q ss_pred cCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHhhCceeeeeCCCCHHHHHHHHHhc
Q 038104 192 SGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLRNTTAYDMYRNISQH 270 (567)
Q Consensus 192 SGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 270 (567)
|||||.||+|.++|+++..+.......++...+|+++..+|++|.+|+.. ++.++..|+++++.+..++..+++.++++
T Consensus 110 SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~ 189 (414)
T PRK08308 110 SGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNT 189 (414)
T ss_pred CCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHh
Confidence 99999999999999999888877777788889999999999999999754 77788899999999889999999999999
Q ss_pred CcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccCCCccccccccccCCCC
Q 038104 271 RVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLP 350 (567)
Q Consensus 271 ~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~ 350 (567)
++|.+.++|+++..+.+.... ..+++.++++|+++++++.+.+++.+.++++.||+||++.+.....
T Consensus 190 ~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~--------- 256 (414)
T PRK08308 190 PQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD--------- 256 (414)
T ss_pred CCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC---------
Confidence 999999999999999876432 1367889999999999999999877789999999999985443211
Q ss_pred CchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecC
Q 038104 351 KPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPD 430 (567)
Q Consensus 351 ~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~ 430 (567)
......+|.|+++. .+++.+. .+ +.||+++++. ++||+|||+|+++++
T Consensus 257 ----~~~~~~~G~p~~~~-~~~~~~~-------~~--~~gel~v~~~------------------~~~~~TGDl~~~~~d 304 (414)
T PRK08308 257 ----MKSHLDLGNPLPHV-SVSAGSD-------EN--APEEIVVKMG------------------DKEIFTKDLGYKSER 304 (414)
T ss_pred ----CCCCCccCccCCCe-EEEEecC-------CC--CCceEEEEcC------------------CceEECCceEEECCC
Confidence 01124678998887 7766542 12 5699999752 579999999999999
Q ss_pred CcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHh
Q 038104 431 GYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRE 510 (567)
Q Consensus 431 g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~ 510 (567)
|.+++.||.+|+++++|++|+|.+||+++.++|+|.+++|++.+++..|+.++++++... ..+.+++++++++
T Consensus 305 g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~-------~~~~~~l~~~l~~ 377 (414)
T PRK08308 305 GTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE-------EIDPVQLREWCIQ 377 (414)
T ss_pred ccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC-------CCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988888888887643 3567899999999
Q ss_pred hCCCCccccEEEEeCCCCCCCCCccchHHH
Q 038104 511 NLSRFMVPKKVVILPELPKTATGKIQKFQL 540 (567)
Q Consensus 511 ~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l 540 (567)
+++.|++|..++++++||+|++||++|+.|
T Consensus 378 ~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 378 HLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred hCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 999999999999999999999999999954
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.1e-55 Score=449.32 Aligned_cols=399 Identities=30% Similarity=0.450 Sum_probs=319.2
Q ss_pred HHHHHHHcCCceEEEe-CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC
Q 038104 20 LKRAAAVYGNRTSIIY-EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL 98 (567)
Q Consensus 20 l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (567)
|+++|+++||++|+++ .++.+||+||+++++++|..|.++|+++||+|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6899999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCceEEEE----cccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCC
Q 038104 99 DAKNVASILRHSEAKVFFV----DCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRF 174 (567)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
+.+++.++++.++++++|+ +......+........ ....++.++....... .............
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 148 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQED------PSSSIIILDRDDLPKK----EALKSASLSDEPQ-- 148 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTST------TTEEEEEESHSSCTTC----HHHHHHHHCHCSH--
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhcccc------cccccccccccccccc----ccccccccccccc--
Confidence 9999999999999999997 2222222333222111 2344555554322110 0000000000000
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh--hhccCCCCCEEEEecchHhhhhH-HHHHHHHhhCce
Q 038104 175 LPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI--LGWEMGSAPVYLWSLPMFHCNGW-TFTWGVAARGGT 251 (567)
Q Consensus 175 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~--~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~~~~g~~ 251 (567)
.+. ..++++++++|||||||.||+|.++|+++...+.... ..++++ |++++.+|++|.+|+ ..++.++..|++
T Consensus 149 ~~~--~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 224 (417)
T PF00501_consen 149 SPE--DSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGAT 224 (417)
T ss_dssp STT--HTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSE
T ss_pred cCC--CCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccccccccccc
Confidence 000 0457999999999999999999999999988877753 223333 699999999999999 678999999999
Q ss_pred eeeeCCCC---HHHHHHHHHhcCcceeecchHHHHHHHhcCCcc----cccCCCceEEEEcCCCCCHHHHHHHHH-hCC-
Q 038104 252 NVCLRNTT---AYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE----RKEIASPVQILTGGAPPPASLLEEIEL-LGF- 322 (567)
Q Consensus 252 ~~~~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~l~~l~~~~~~g~~l~~~~~~~~~~-~~~- 322 (567)
+++.+... ++.+++.++++++|++.++|+++..+++..... ...++++|.++++|+++++++.+++++ ++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 304 (417)
T PF00501_consen 225 LVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNA 304 (417)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTS
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccc
Confidence 99998764 467899999999999999999999998832121 347888999999999999999999994 565
Q ss_pred eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchh
Q 038104 323 HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKG 402 (567)
Q Consensus 323 ~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~g 402 (567)
++++.||+||++.+++... ..........+|.|+++. +++|+|.+++.+++.+ +.|||+++|+.++.|
T Consensus 305 ~i~~~YG~tE~~~~~~~~~---------~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~~~~~~g 372 (417)
T PF00501_consen 305 PIINLYGSTETGSIATIRP---------PEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRGPNVFSG 372 (417)
T ss_dssp EEEEEEEEGGGSSEEEEEE---------TTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEESTTSBSE
T ss_pred cceecccccccceeeeccc---------cccccccccccccccccc-cccccccccccccccc--ccccccccCCcccee
Confidence 8999999999998887542 111222335689999988 9999999889999888 889999999999999
Q ss_pred ccCChhhhhhcccC-CcccCCceEEEecCCcEEEEccCCceeeeC
Q 038104 403 YLKNEEATSQSFKN-GWFRTGDVGVIHPDGYLEIKDRSKDVIISG 446 (567)
Q Consensus 403 y~~~~~~~~~~~~~-~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~ 446 (567)
|+++++.+.+.|.+ |||+|||+|++|++|.+++.||.||+||++
T Consensus 373 y~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 373 YYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp ETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999976 899999999999999999999999999864
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.3e-51 Score=417.30 Aligned_cols=393 Identities=25% Similarity=0.291 Sum_probs=327.5
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcc
Q 038104 41 NWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 41 Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (567)
||+||.+.++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCc
Q 038104 120 QYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPK 199 (567)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK 199 (567)
.....+... ...++...... ...................+++++++|||||||.||
T Consensus 81 ~~~~~~~~~------------~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGL------------VLPIILVDPLE------------LAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhcccc------------CCceEEechhh------------hhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 765544321 11222221110 000000000000111134678999999999999999
Q ss_pred eEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCCCC---HHHHHHHHHhcCcceee
Q 038104 200 GVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTT---AYDMYRNISQHRVTHMC 276 (567)
Q Consensus 200 ~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~---~~~~~~~i~~~~~t~l~ 276 (567)
+|.++|+++..........+.+.++|+++...|++|.+++...+.++..|+++++.+... +..+.+.++++++|.+.
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~ 216 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLN 216 (408)
T ss_pred EEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEE
Confidence 999999999988888888888999999999999999999888899999999999887653 57899999999999999
Q ss_pred cchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhC-CeeeccccccccCCCccccccccccCCCCCchh
Q 038104 277 CAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLG-FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQ 354 (567)
Q Consensus 277 ~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~-~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~ 354 (567)
++|.+++.|.+... ..++++|.+++||+++++++.+.+. .++ +.+++.||+||+++++........... .
T Consensus 217 ~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~-----~ 288 (408)
T TIGR01733 217 LTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAP-----R 288 (408)
T ss_pred eCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccC-----C
Confidence 99999999988754 5678999999999999999999998 555 899999999999877753322111100 0
Q ss_pred hhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccC-------C--cccCCceE
Q 038104 355 AKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKN-------G--WFRTGDVG 425 (567)
Q Consensus 355 ~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~--~~~TGD~~ 425 (567)
. ....+|.|.++. .++|++.+ +..++.+ +.|||+++|+.++.||+++++.+.+.|.. | ||+|||+|
T Consensus 289 ~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~ 363 (408)
T TIGR01733 289 E-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLV 363 (408)
T ss_pred c-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceE
Confidence 0 246789999998 89999875 6777766 78999999999999999999999888743 2 99999999
Q ss_pred EEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEE
Q 038104 426 VIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAV 470 (567)
Q Consensus 426 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 470 (567)
+++++|++++.||.+|+++.+|++++|.+||+++.++++|.+++|
T Consensus 364 ~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 364 RYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred EEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 999999999999999999999999999999999999999998765
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=6.7e-47 Score=377.58 Aligned_cols=321 Identities=25% Similarity=0.405 Sum_probs=273.9
Q ss_pred CCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee---C
Q 038104 180 HDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL---R 256 (567)
Q Consensus 180 ~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~---~ 256 (567)
..++++++++|||||||.||+|.++|+++.......... +...++++..+|++|.+++..++.+++.|++.++. .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 445799999999999999999999999998777655444 34557889999999999998888888899988873 3
Q ss_pred CCCHHHHHHHHHhcC--cceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCCeeeccccccccC
Q 038104 257 NTTAYDMYRNISQHR--VTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEAT 334 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~yG~tE~~ 334 (567)
.+++..+++.+++++ .++...+|..+..++.... ....+++++.+++||+++++++.+.+.+.++++++.||+||++
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~ 188 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETS 188 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccC
Confidence 578999999999998 5566678888877765433 2346789999999999999999999888899999999999987
Q ss_pred CCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcc
Q 038104 335 GPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSF 414 (567)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 414 (567)
..+. ..|.|+++. .+++.+ |||+++|+.++.||+++++.+. ..
T Consensus 189 ~~~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~~-~~ 231 (358)
T PRK07824 189 GGCV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPDP-FA 231 (358)
T ss_pred CCcC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCccccc-cc
Confidence 5442 136677665 555521 9999999999999999887542 22
Q ss_pred cCCcccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCC
Q 038104 415 KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAG 494 (567)
Q Consensus 415 ~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~ 494 (567)
.+|||+|||+|++ ++|.+++.||.||+|+.+|++|+|.+||.+|.++|+|.+++|++.+++..|+.++++++...+.
T Consensus 232 ~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~-- 308 (358)
T PRK07824 232 EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGP-- 308 (358)
T ss_pred CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCC--
Confidence 4789999999999 7999999999999999999999999999999999999999999999998899999998766543
Q ss_pred CCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHHHh
Q 038104 495 KTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKN 546 (567)
Q Consensus 495 ~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~~~ 546 (567)
....++|++++++.++.|++|..|+++++||+|.+||++|++|++++.+
T Consensus 309 ---~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 309 ---APTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred ---CcCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 5678999999999999999999999999999999999999999998754
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.5e-45 Score=407.61 Aligned_cols=476 Identities=17% Similarity=0.137 Sum_probs=354.6
Q ss_pred CCHHHHHHHHHHHcCCceEEEeC---C--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYE---G--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
.|+.++|.+.++++|+++|+... + +.+||+|+.++++++|.+|.+.|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 48999999999999999999742 3 679999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCC----C--CCccCCccc
Q 038104 89 AVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDS----P--TGIRFGEFE 162 (567)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~----~--~~~~~~~~~ 162 (567)
++.+|+++ +.+++.++++.++++++|++.+...++.++.. ...+.++++++... . ........+
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--------~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s 576 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--------RKLETVVYTHSFYDEDDHAVARDLNITLIP 576 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--------cCCcEEEEECCCcccccccccccCCcceee
Confidence 99999975 36789999999999999999877766655321 14678888753210 0 001123467
Q ss_pred HHHHHhcCCCCCCC-CCCCCCCCcEEEEe---ccCCCCCCceEEechHHHHHHhhHhhhhc---cCCCCCEEEEecchHh
Q 038104 163 YEQFVQMGDPRFLP-EEIHDEWDPITLNY---TSGTTSAPKGVVYSHRGAYLSTLSLILGW---EMGSAPVYLWSLPMFH 235 (567)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~~~~~a~i~~---TSGtTG~pK~v~~~~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~ 235 (567)
|.++...+.....+ .....+++++.++| ||||||.||||++||++++.++....... ...++|+++..+|++|
T Consensus 577 ~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaH 656 (1452)
T PTZ00297 577 YEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAM 656 (1452)
T ss_pred HHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHH
Confidence 89988876422111 22346778998885 99999999999999999998887765432 3567899999999999
Q ss_pred hhhHHHHHHHHhhCceeeeeCCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcc-----------------------
Q 038104 236 CNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE----------------------- 292 (567)
Q Consensus 236 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----------------------- 292 (567)
.++....+.++..|+++.. +++..+++.|++++||++.++|.+|+.+.......
T Consensus 657 I~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~ 733 (1452)
T PTZ00297 657 LFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLI 733 (1452)
T ss_pred HHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9997777777888888764 47889999999999999999999998775431100
Q ss_pred --cc----------------cC-CCceEEEEcCC--CCCHHHHHHHHHhCCeeeccccccccCCCccccccccccCCCCC
Q 038104 293 --RK----------------EI-ASPVQILTGGA--PPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPK 351 (567)
Q Consensus 293 --~~----------------~l-~~l~~~~~~g~--~l~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~ 351 (567)
.. .+ ..+|.+++||+ +++..+ ..++++...||.||+. +.+..
T Consensus 734 ~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~~i~i~~g~glTE~~---~~~~~--------- 796 (1452)
T PTZ00297 734 NIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LEHISVCYVPCLREVF---FLPSE--------- 796 (1452)
T ss_pred hcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hCCceEEEecceEEee---eecCC---------
Confidence 00 01 36777888863 444333 3357788899999943 11110
Q ss_pred chhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEecCC
Q 038104 352 PDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDG 431 (567)
Q Consensus 352 ~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g 431 (567)
... ...|.|++++ ++++.+.+..... +..|||+++ |+++|+.|.+. .+||+ +||
T Consensus 797 ~~~----~~~G~Plpgv-EvKI~~~~E~~~~----~~~GEIlvr-------~~kdpe~T~e~-~~gW~---------~dG 850 (1452)
T PTZ00297 797 GVF----CVDGTPAPSL-QVDLEPFDEPSDG----AGIGQLVLA-------KKGEPRRTLPI-AAQWK---------RDR 850 (1452)
T ss_pred CCc----ccCCeecCce-EEEEcccccccCC----CCCCeEEEE-------ECCChHHHHHh-hCcCc---------cCC
Confidence 000 1239999999 9999875332211 135999996 35889988874 35664 699
Q ss_pred cEEEEccCCceee-eCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCC------CCC-------
Q 038104 432 YLEIKDRSKDVII-SGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAG------KTD------- 497 (567)
Q Consensus 432 ~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~------~~~------- 497 (567)
+|++.||++|+|| .+|++|.|+.||..+..+|.|.+++|+|.+.+. ++|+|++...... .+.
T Consensus 851 ~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~~~~~~~ 926 (1452)
T PTZ00297 851 TLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMGEGGGPA 926 (1452)
T ss_pred eEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCCcccccc
Confidence 9999999999999 899999999999999999999999999876543 7888876642110 000
Q ss_pred -CCCHH--------HHHHHH---Hh--hCCCCccccEEEEeC-CC-----CCCCCCccchHHHHHHHHhhhc
Q 038104 498 -DVNEA--------DILSYC---RE--NLSRFMVPKKVVILP-EL-----PKTATGKIQKFQLRALAKNFAV 549 (567)
Q Consensus 498 -~~~~~--------~l~~~~---~~--~l~~~~~p~~i~~v~-~~-----P~t~~GKv~r~~l~~~~~~~~~ 549 (567)
..+.. .+.+.+ .+ .+..+.+++.+.++. +| -+|++.|++|+.+.++|++...
T Consensus 927 ~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie 998 (1452)
T PTZ00297 927 RQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIE 998 (1452)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHH
Confidence 01222 233332 11 255677887777654 45 4799999999999999998543
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.9e-38 Score=335.98 Aligned_cols=406 Identities=21% Similarity=0.243 Sum_probs=335.8
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
.++...|.+.+...|+++|+.+.+..+||+++..+++++|+.|.+.|+++++.|+++.++++++++.++|++++|+.++|
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCC
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPR 173 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
++|.++.+++.++++.++++.+++......... .... +.++... .. ...
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~-~~~~~~~----------------~~-~~~ 355 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV-------------GLPG-LALDDAL----------------SE-IPD 355 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEeccccccccc-------------cCCc-ccccccc----------------cc-CCc
Confidence 999999999999999999999998733211000 0000 1111100 00 000
Q ss_pred CCC-CCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee
Q 038104 174 FLP-EEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN 252 (567)
Q Consensus 174 ~~~-~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~ 252 (567)
..+ .....+++.+|++|||||||.||||..+|+++..........+.+..+|+++...++.+......++.++..|+++
T Consensus 356 ~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l 435 (642)
T COG1020 356 TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGARL 435 (642)
T ss_pred cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHhCCCEE
Confidence 001 1224457999999999999999999999999988677776678999999999999987777777889999999999
Q ss_pred eeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcc--cccCCCceEEEEcCCCCCHHHHHHHHHh---CCee
Q 038104 253 VCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE--RKEIASPVQILTGGAPPPASLLEEIELL---GFHV 324 (567)
Q Consensus 253 ~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~l~~l~~~~~~g~~l~~~~~~~~~~~---~~~i 324 (567)
++.+. .++..+.+.+.++++|.+..+|.++..++...... ....+.++.+++||+.++..+...+... ...+
T Consensus 436 ~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l 515 (642)
T COG1020 436 VLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRL 515 (642)
T ss_pred EecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceE
Confidence 99874 57889999999999999999999999998762222 2223358999999999999999988744 4689
Q ss_pred eccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhcc
Q 038104 325 THAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYL 404 (567)
Q Consensus 325 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 404 (567)
.+.||.||+............ ... ...+|.|+.+. .+.+.| +..+.+|.+ ..||+++.|.++..||+
T Consensus 516 ~~~ygpTe~~~~~~~~~~~~~-------~~~--~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~g~~~a~gy~ 582 (642)
T COG1020 516 LNLYGPTEATLDAPSFPISAE-------LES--RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIAGLGLALGYL 582 (642)
T ss_pred eeccCccHHhhheeeEEcccc-------cCC--CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEECCcchhhhhc
Confidence 999999996554443321111 001 46789999996 888888 578888888 77999999999999999
Q ss_pred CChhhhhhcccCC-cccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCC
Q 038104 405 KNEEATSQSFKNG-WFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHP 463 (567)
Q Consensus 405 ~~~~~~~~~~~~~-~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 463 (567)
++++.+.++|... +|+|||++++.++|.+.++||.|+++|++|++|.+.+||..+..+|
T Consensus 583 ~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 583 NRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999875 9999999999999999999999999999999999999999998764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=5.5e-38 Score=310.93 Aligned_cols=288 Identities=23% Similarity=0.254 Sum_probs=227.0
Q ss_pred CCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCC--CCEEEEecchHhhhhHHH-HHHHHhhCceeeeeCCCC
Q 038104 183 WDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGS--APVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLRNTT 259 (567)
Q Consensus 183 ~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~ 259 (567)
+..++++|||||||.||+|.++|+++...+......+++.. .|+++..+|++|.+|+.+ ++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 45788999999999999999999999888877776666643 468999999999999754 566778899998888888
Q ss_pred HHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHHHhCC-eeeccccccccCCCcc
Q 038104 260 AYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGF-HVTHAYGLTEATGPAL 338 (567)
Q Consensus 260 ~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~~~~~-~i~~~yG~tE~~~~~~ 338 (567)
+..+++.++.+ +++.++|++++.+.+.. ..+++++. ++||+++++++.+.+++.+. .+++.||+||++++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~ 247 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGL 247 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHhcccchhheecccccccccc
Confidence 88888887653 89999999999997653 34566765 68899999999999987664 6999999999987654
Q ss_pred ccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCc
Q 038104 339 VCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGW 418 (567)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 418 (567)
.... ...|.+.++. .+.+ +++ .+ .|+ ..|
T Consensus 248 ~~~~----------------~~~~~~~p~~-~~~~---~~~----------~~---~g~------------------~~~ 276 (386)
T TIGR02372 248 REAP----------------DDPFRLLPDL-ACFA---DTL----------SS---AGL------------------ARR 276 (386)
T ss_pred ccCC----------------CCCcccCCCc-cccC---CCc----------cC---CCc------------------cce
Confidence 3210 1123344333 2111 000 00 011 125
Q ss_pred ccCCceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCC
Q 038104 419 FRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDD 498 (567)
Q Consensus 419 ~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 498 (567)
++|||+|+++++|++++.||+||+|+++|++|+|.+||++|.++|+|.+++|.. .|+++.++|+..++.. ..
T Consensus 277 ~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~---~~ 348 (386)
T TIGR02372 277 LDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDAD---EA 348 (386)
T ss_pred eecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCC---hH
Confidence 889999999999999999999999999999999999999999999999998863 3667888888775431 01
Q ss_pred CCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccc
Q 038104 499 VNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQ 536 (567)
Q Consensus 499 ~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~ 536 (567)
...++++++++++++.|++|..+.++++||+|++||++
T Consensus 349 ~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 349 ELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 12568999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=9.4e-36 Score=303.07 Aligned_cols=328 Identities=20% Similarity=0.215 Sum_probs=237.9
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhH---hhhhccCCCCCEEEEecchHhhh-hHHHHHHHHhhCceeeeeC
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLS---LILGWEMGSAPVYLWSLPMFHCN-GWTFTWGVAARGGTNVCLR 256 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~-g~~~~~~~~~~g~~~~~~~ 256 (567)
..++++.+++||||||.||++.++|.++...... ....+++.++|+++...+..+.. ++...+.....|++++.+.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 3457888999999999999999999988654332 23346788999998876654333 3333455667888888887
Q ss_pred CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCccccc--CCCceEEEEcCCCCCHHHHHHHH-HhCCeeecccccccc
Q 038104 257 NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKE--IASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEA 333 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~--l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~ 333 (567)
..+++.+++.|++++|+++.++|+++..|++........ ..+++.++++||++++++++.+. .+++++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 778899999999999999999999999998764333222 35899999999999999999998 579999999999998
Q ss_pred CCCccccccccccCCCCCchhhhhccccCceeee-ecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhh
Q 038104 334 TGPALVCEWQSSWNQLPKPDQAKLKARQGISILT-LADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQ 412 (567)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (567)
++..+... +.. ...|.++.. ...++|+|.+++.+++.| +.|||++++. +.+
T Consensus 233 ~~~~~~~~-~~~-------------~~~g~~~~~~~~~~eivd~~~g~~v~~G--e~Gelvvt~~------------~~~ 284 (422)
T TIGR02155 233 IGPGVAME-CVE-------------TQDGLHIWEDHFYPEIIDPHTGEVLPDG--EEGELVFTTL------------TKE 284 (422)
T ss_pred cCCceeec-ccc-------------cCCCceEecCeeEEEEECCCCCCCCCCC--CeeEEEEecC------------Ccc
Confidence 53222111 000 112333332 125678887788888877 8899999973 234
Q ss_pred cccCCcccCCceEEEecC-C-----cEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEE
Q 038104 413 SFKNGWFRTGDVGVIHPD-G-----YLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFI 486 (567)
Q Consensus 413 ~~~~~~~~TGD~~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 486 (567)
.|..+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+++........+.+.+.|
T Consensus 285 ~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v 364 (422)
T TIGR02155 285 ALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKV 364 (422)
T ss_pred ccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEE
Confidence 455679999999999875 4 4689999999999999999999999999999999844444444444445677777
Q ss_pred EeecCCCCCCCCC----CHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchH
Q 038104 487 SVKTNSAGKTDDV----NEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKF 538 (567)
Q Consensus 487 ~~~~~~~~~~~~~----~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~ 538 (567)
+..++........ ..++|++.+++.+..+.. ..++.+++||+|. ||++|.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 365 ELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 7664431000001 146677888887766532 2333346999988 999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=279.87 Aligned_cols=509 Identities=15% Similarity=0.144 Sum_probs=353.7
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCC------eeeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhh
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEG------ARFNWLQTYDRCRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPM 86 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~ 86 (567)
.++.++|++++..+||++|+...+ .++||++|..+|.+++..|+.. -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 689999999999999999999843 6899999999999999999864 679999999999999999999999999
Q ss_pred ccceeeeccCCC------ChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCc
Q 038104 87 AEAVLNTINVRL------DAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGE 160 (567)
Q Consensus 87 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 160 (567)
+|.+++|+.|.. .-..+..+++.+++.+|+++......++.........+ ...+.++.+++....
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~--s~~p~i~~~~~~~~t------- 920 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQ--SAIPLILVLPKLPET------- 920 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhh--hcchhhhcccccchh-------
Confidence 999999999843 34778999999999999999987776654322211111 023444444432211
Q ss_pred ccHHHHHh--cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhh
Q 038104 161 FEYEQFVQ--MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 161 ~~~~~~~~--~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 238 (567)
|..... .......++...+++.+|++-|.--++|.-.++.++|.++++-++.......+.+..-++...+.+...|
T Consensus 921 --~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlg 998 (1363)
T KOG3628|consen 921 --IRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLG 998 (1363)
T ss_pred --hhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchh
Confidence 111111 1112222333456678999999999999999999999999999999999888888777777776666666
Q ss_pred HH-HHHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCce-----EEEEcCC-
Q 038104 239 WT-FTWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPV-----QILTGGA- 307 (567)
Q Consensus 239 ~~-~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~-----~~~~~g~- 307 (567)
+. +.+...+.|...+++++ .++..++..|+++++.-++.+-..++.+.........+++... .++.-.+
T Consensus 999 f~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~ 1078 (1363)
T KOG3628|consen 999 FNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEE 1078 (1363)
T ss_pred HHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCC
Confidence 54 47778889999888864 4788899999999999999999988888765443333332211 3333333
Q ss_pred CCCHHHHHHHHHh----CC---eeeccccccccCCCccccccccccCCCCCch----------------hhhhccccCce
Q 038104 308 PPPASLLEEIELL----GF---HVTHAYGLTEATGPALVCEWQSSWNQLPKPD----------------QAKLKARQGIS 364 (567)
Q Consensus 308 ~l~~~~~~~~~~~----~~---~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~G~~ 364 (567)
.....+.+.+.+. +. .+...|++.=.-.++.....+..-.....+. ........|..
T Consensus 1079 RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~ 1158 (1363)
T KOG3628|consen 1079 RPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKL 1158 (1363)
T ss_pred ccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcc
Confidence 3334444444422 22 2445566554444443322211111100000 00011112444
Q ss_pred eeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChh-hhhhcc----------cCCcccCCceEEEec----
Q 038104 365 ILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEE-ATSQSF----------KNGWFRTGDVGVIHP---- 429 (567)
Q Consensus 365 ~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~----------~~~~~~TGD~~~~~~---- 429 (567)
.+.. ++.|+++++..++..+ +.||||+.|.+-..+|+...+ .....| ..+|-||||+|++..
T Consensus 1159 ~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t 1235 (1363)
T KOG3628|consen 1159 PVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLT 1235 (1363)
T ss_pred cccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecc
Confidence 4444 8889988887777666 999999999988877765321 222222 235999999999852
Q ss_pred --C----CcEEEEccCCceeeeCceeechHHHHHHHHc-CCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHH
Q 038104 430 --D----GYLEIKDRSKDVIISGGENISSVELENVLFR-HPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEA 502 (567)
Q Consensus 430 --~----g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~ 502 (567)
+ ..+|++|-.++.+.++|.+.+|.+||..+.+ ||.|.+|+|+.. +..++..+++... ....+
T Consensus 1236 ~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~~gq------~~~~~ 1304 (1363)
T KOG3628|consen 1236 DANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIECHGQ------QELAD 1304 (1363)
T ss_pred cccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEecCc------hhHhh
Confidence 2 3489999999999999999999999998776 799999999954 4456666665531 12222
Q ss_pred HHHHHHHhhCCCCcccc-EEEEeC--CCCCCCCCccchHHHHHHHHhh
Q 038104 503 DILSYCRENLSRFMVPK-KVVILP--ELPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 503 ~l~~~~~~~l~~~~~p~-~i~~v~--~~P~t~~GKv~r~~l~~~~~~~ 547 (567)
-+--.+...|..|.+.. .+.||+ .||+++.|--+|..+++.+.+.
T Consensus 1305 LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~ 1352 (1363)
T KOG3628|consen 1305 LVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAG 1352 (1363)
T ss_pred hhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhc
Confidence 22333445566665554 445666 4999999999999999888764
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.2e-32 Score=284.45 Aligned_cols=504 Identities=21% Similarity=0.199 Sum_probs=338.0
Q ss_pred CCHHHHHHHHHHHcCCceEEEeCC--------eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhh
Q 038104 14 LSPLTFLKRAAAVYGNRTSIIYEG--------ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVP 85 (567)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~ 85 (567)
-++...+++.+...|+..+..+.- ...||++....++.+++.|...|...|+.|+++++.+.++++..++++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 367778889999999988776621 689999999999999999999999999999999999999999999999
Q ss_pred hccceeeeccCCCC----hHHHHHHHHhcCceEEEEcccchHH---HHHHhhhhhccccCCCCCeEEEEeCCCCCCCccC
Q 038104 86 MAEAVLNTINVRLD----AKNVASILRHSEAKVFFVDCQYVQL---AREALKLYFVEDRDAAGPRVILIDDIDSPTGIRF 158 (567)
Q Consensus 86 ~~G~~~v~l~~~~~----~~~l~~~l~~~~~~~ii~~~~~~~~---~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~ 158 (567)
+.|..+++++|.++ ++.+..+.... .-..-+...+ +........ ....+...
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~----~s~~~~i~~~l~i~~~~~~~~~------~~~sv~~~----------- 174 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFL----TSVELEIVRRLNIIDILLNSLF------PKLSVETI----------- 174 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhh----eeccceehhhhhhHHHHhhccc------cccchhhc-----------
Confidence 99999999999998 22211111100 0000111111 111111000 00001000
Q ss_pred CcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhh
Q 038104 159 GEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNG 238 (567)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 238 (567)
.-.|..+........ ......+..+.+.||||+||.||+|..+|..+.....+....+.....+.+-.....+....
T Consensus 175 -~~~f~~~~~~~~~r~--~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~ 251 (1032)
T KOG1178|consen 175 -ADSFQMVLHNEDTRE--IRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDT 251 (1032)
T ss_pred -cchhhhhhccCCCcc--eeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccc
Confidence 011111111111111 11245667899999999999999999999999888888887777777776533333333333
Q ss_pred HHHHHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcc-------------cccCCCceE
Q 038104 239 WTFTWGVAARGGTNVCLRN----TTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEE-------------RKEIASPVQ 301 (567)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-------------~~~l~~l~~ 301 (567)
....+.+++.++..++.+. .++..+...+++++++....+|++.+.++...... ....+.++.
T Consensus 252 i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl 331 (1032)
T KOG1178|consen 252 IQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKL 331 (1032)
T ss_pred hHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhhee
Confidence 4455666666666555542 34789999999999999999999988887764431 112337888
Q ss_pred EEEcCCCCCHHHHHHHH-Hh--CCeeeccccccccCCCccccccccccCCCCCchhhhh---ccccCceeeeecceEEee
Q 038104 302 ILTGGAPPPASLLEEIE-LL--GFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKL---KARQGISILTLADVDVKN 375 (567)
Q Consensus 302 ~~~~g~~l~~~~~~~~~-~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~G~~~~~~~~~~i~~ 375 (567)
...+|++....+..... .+ +.... -|+.++..+...+....+.-..+....-.-. ....|... .+.+..
T Consensus 332 ~~~~~ep~~v~l~~s~~~~~~~~~~~~-~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~----~~~~~~ 406 (1032)
T KOG1178|consen 332 VVLGGEPLLVSLYTSTFDLLAEIFFGL-PYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLT----VLESLY 406 (1032)
T ss_pred eeecCCccchhhhhhhhhcccceeeee-cccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCc----ceeeee
Confidence 99999999998887444 22 22222 3888887777665432221111110000000 00011111 111111
Q ss_pred CCCCCCcCCC--CcceeEEEEecCccchhccCChhhhhhcc------cCCcccCCceEEEecCCcEEEEccCCceeeeCc
Q 038104 376 LDTMSSVPRD--GKTMGEIVLRGSSIMKGYLKNEEATSQSF------KNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGG 447 (567)
Q Consensus 376 ~~~~~~~~~~--~~~~Gel~v~~~~~~~gy~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G 447 (567)
..+.+.+.+ .++.|+-.-.++++..| +..++.....+ .+..|+|||+|+..++|.+.+.||.|++||.+|
T Consensus 407 -~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG 484 (1032)
T KOG1178|consen 407 -RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRG 484 (1032)
T ss_pred -ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEcc
Confidence 122221111 11333333334455555 33333322222 244899999999999999999999999999999
Q ss_pred eeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCC
Q 038104 448 ENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPEL 527 (567)
Q Consensus 448 ~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~ 527 (567)
.++...+|+..+..+|.|.++.++...+++.++++++||+...... ......|++++.+.|+.|++|..+++++++
T Consensus 485 ~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~----~~~~~~i~~~l~~~La~y~vPs~~V~l~~v 560 (1032)
T KOG1178|consen 485 VRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSK----SVLIRDIRNYLKKELASYMLPSLVVPLAKV 560 (1032)
T ss_pred EEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCC----chhHHHHHHhhcccccceecceEEEEhhhC
Confidence 9999999999999999999999999999999999999999887653 344688999999999999999999999999
Q ss_pred CCCCCCccchHHHHHHHHhhhcccc
Q 038104 528 PKTATGKIQKFQLRALAKNFAVSKD 552 (567)
Q Consensus 528 P~t~~GKv~r~~l~~~~~~~~~~~~ 552 (567)
|+|++||||+++|.+.....-...+
T Consensus 561 Pl~~~GKvDkkaL~~~~s~~~~~~~ 585 (1032)
T KOG1178|consen 561 PLNPNGKVDKKALLEYNSKLTNVQD 585 (1032)
T ss_pred CcCCCCCcChhhhhhhhhhhccccc
Confidence 9999999999999996555544433
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=2.4e-28 Score=248.61 Aligned_cols=322 Identities=18% Similarity=0.129 Sum_probs=215.0
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHH-HHHHHhhCceeeeeC
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTF-TWGVAARGGTNVCLR 256 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~ 256 (567)
..++++.+.+||||||.||++.++|+++......... ..++.++|+++...|..+..+... .+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 4457888999999999999999999998765544333 348899999999888776655433 344556677654332
Q ss_pred CCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccc--cCCCceEEEEcCCCCCHHHHHHHH-HhCCeeecccccccc
Q 038104 257 NTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERK--EIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEA 333 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~--~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~ 333 (567)
.....++.|++++++.+.++|+.+..|++....... ...+++.+++|||+++++.++.+. .+++++++.||+||+
T Consensus 164 --~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 164 --KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred --chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 335678999999999999999998888765433222 236899999999999999999888 579999999999998
Q ss_pred CCCccccccccccCCCCCchhhhhccccCceeee-ecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhh
Q 038104 334 TGPALVCEWQSSWNQLPKPDQAKLKARQGISILT-LADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQ 412 (567)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 412 (567)
+ ++..|.. ..|.+++. ...++|+|++++.+++.| +.|||++++-...- +.+
T Consensus 242 ~-~~~~c~~-----------------~~g~h~~~d~~~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~--------~r~ 293 (445)
T TIGR03335 242 T-MCGECQA-----------------VAGLHVPEDLVHLDVYDPRHQRFLPDG--ECGRIVLTTLLKPG--------ERC 293 (445)
T ss_pred h-heEEecC-----------------CCCccccCCceEEEEEcCCCCCCCcCC--CceEEEEEecCCCC--------ccC
Confidence 5 3333310 12333332 126889998877778877 88999999743210 000
Q ss_pred cccCCcccCCceEEEec-C----C----cEEEEccCCceeeeCceeechHHHHHHHHcC---CCce-EEEEEeecCCCCC
Q 038104 413 SFKNGWFRTGDVGVIHP-D----G----YLEIKDRSKDVIISGGENISSVELENVLFRH---PRVL-EAAVVAMPHPQWG 479 (567)
Q Consensus 413 ~~~~~~~~TGD~~~~~~-~----g----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~v~-~~~v~~~~~~~~g 479 (567)
.+.=--|+|||++.+.. + | ++...||+||+++++|.+++|.+||++|.+. +++. ++.++...+....
T Consensus 294 ~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~ 373 (445)
T TIGR03335 294 GSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGE 373 (445)
T ss_pred CceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCC
Confidence 00001299999998732 2 2 1445699999999999999999999999994 6654 3444433322212
Q ss_pred CceeEEEEeecCCCCCCCCCCHHHHHHHHHhh----CC-------CCccccEEEEeC--CCCCCC-CCccch
Q 038104 480 ESPCAFISVKTNSAGKTDDVNEADILSYCREN----LS-------RFMVPKKVVILP--ELPKTA-TGKIQK 537 (567)
Q Consensus 480 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~----l~-------~~~~p~~i~~v~--~~P~t~-~GKv~r 537 (567)
..+.+.|+..++. ..+.+++.+.+.+. ++ ...+...+.+++ .+||++ .||..|
T Consensus 374 ~~~~v~~e~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 374 ITLRVSLECEDKD-----NCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred ceEEEEEEecCcc-----cchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2344445554432 12333444333333 21 112233445554 699984 698776
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=1.5e-26 Score=212.17 Aligned_cols=214 Identities=14% Similarity=0.058 Sum_probs=165.7
Q ss_pred HHHHHHHcCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 20 LKRAAAVYGNRTSIIYE------GARFNWLQTYDRCRRLASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 20 l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
+.+.++.+|+++|+++. ++++||+||.++++++|++|.+ .|+++||+|+|+++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999752 2369999999999999999998 7999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCC----CccCCcccHHHHHh
Q 038104 93 TINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPT----GIRFGEFEYEQFVQ 168 (567)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~~~~~~~~~~~~~~ 168 (567)
|++ .+++++++++++....+.. . ..++.+....... ....+...|.+...
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG------------S-GEVVALSLDPLGRRVAGELPPGVIDFAPEVR 135 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc------------C-CceEEEeccccccCCCCCCCCcccchhhhhh
Confidence 995 6789999999887665321 1 2233332110000 11223346666555
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH-HHHHHh
Q 038104 169 MGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF-TWGVAA 247 (567)
Q Consensus 169 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~ 247 (567)
.......+.....++|++.++||||+ +|.+++.+. ...++.++|+++ ..|++|.+|+.. ++.++.
T Consensus 136 ~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~ 201 (227)
T TIGR03089 136 VHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLA 201 (227)
T ss_pred ccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhc
Confidence 43333332213456899999999986 555655544 456789999999 999999999864 788899
Q ss_pred hCceeeeeCCCCHHHHHHHHHhcCcc
Q 038104 248 RGGTNVCLRNTTAYDMYRNISQHRVT 273 (567)
Q Consensus 248 ~g~~~~~~~~~~~~~~~~~i~~~~~t 273 (567)
.|+++++.++++++.+++.|+++|+|
T Consensus 202 ~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 202 AGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred cCceEEEecCCCHHHHHHHHHhhcCC
Confidence 99999999999999999999999987
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.95 E-value=1.3e-25 Score=215.90 Aligned_cols=322 Identities=21% Similarity=0.270 Sum_probs=229.9
Q ss_pred CCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecch-HhhhhHHHHHHHHhhCceeeee
Q 038104 180 HDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPM-FHCNGWTFTWGVAARGGTNVCL 255 (567)
Q Consensus 180 ~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~-~~~~g~~~~~~~~~~g~~~~~~ 255 (567)
...++...+-.||||||+|+.+.+++..+...+..... ..+...+|++...... .+..|+..-+++--.|.+++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 33456677899999999999999999987666555444 4478889988876652 1222233334444567776666
Q ss_pred CCCCHHHHHHHHHhcCcceeecchHHHHHHHhcCCccc--ccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccc
Q 038104 256 RNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEER--KEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTE 332 (567)
Q Consensus 256 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE 332 (567)
...+.+..+++++.+++|++.++|+.+..|++...+.+ ..-.++|.+++|+|+++++.++.+. .+|+.+++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 66788899999999999999999999999998876664 2334899999999999999999999 78999999999999
Q ss_pred cCCCc-cccccccccCCCCCchhhhhccccCceeee-ecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhh
Q 038104 333 ATGPA-LVCEWQSSWNQLPKPDQAKLKARQGISILT-LADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEAT 410 (567)
Q Consensus 333 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 410 (567)
..+.. ..|.... |.++.. ...++++|++++..++.| +.|||+++.-. +
T Consensus 247 ~~g~g~~eC~~~~-----------------glhi~eD~~~~Ei~dP~t~e~l~dg--e~GelV~T~L~-------~---- 296 (438)
T COG1541 247 GFGPGAGECTERN-----------------GLHIWEDHFIFEIVDPETGEQLPDG--ERGELVITTLT-------K---- 296 (438)
T ss_pred ccCCccccccccc-----------------CCCcchhhceeeeecCCcCccCCCC--CeeEEEEEecc-------c----
Confidence 97774 3343221 222211 127899999999998888 88999999732 1
Q ss_pred hhcccCCcccCCceEEEecC----Cc-----EEEEccCCceeeeCceeechHHHHHHHHcCCCce-EEEEEeecCCCCCC
Q 038104 411 SQSFKNGWFRTGDVGVIHPD----GY-----LEIKDRSKDVIISGGENISSVELENVLFRHPRVL-EAAVVAMPHPQWGE 480 (567)
Q Consensus 411 ~~~~~~~~~~TGD~~~~~~~----g~-----l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~g~ 480 (567)
+.+.---|+|||+..+.++ |+ ..+.||+||++.+.|.+|+|..||..|.+.+++. +.+++... .....
T Consensus 297 -~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d 374 (438)
T COG1541 297 -EGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLD 374 (438)
T ss_pred -cCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCc
Confidence 1111113999999999763 22 4588999999999999999999999999999998 67776665 44445
Q ss_pred ceeEEEEeecCCCCCCCCCCHHHHHHHHHhhC-CCCccccEEE--EeCCCCCCCCCccch
Q 038104 481 SPCAFISVKTNSAGKTDDVNEADILSYCRENL-SRFMVPKKVV--ILPELPKTATGKIQK 537 (567)
Q Consensus 481 ~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l-~~~~~p~~i~--~v~~~P~t~~GKv~r 537 (567)
.+.+.|+..+++.. ..+..++.+.+.+.+ ........|. .+.++|||. ||..|
T Consensus 375 ~L~V~vE~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 375 ELTVRVELENEAEE---LEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred eEEEEEEecCcccc---hHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-CceeE
Confidence 67777887754211 222333333443332 1122333344 445899996 46554
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=1.9e-21 Score=188.33 Aligned_cols=117 Identities=21% Similarity=0.309 Sum_probs=109.0
Q ss_pred ccCCcccCCceEEE-ecCCcEEEEccCCceeeeCc---eeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEee
Q 038104 414 FKNGWFRTGDVGVI-HPDGYLEIKDRSKDVIISGG---ENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVK 489 (567)
Q Consensus 414 ~~~~~~~TGD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~ 489 (567)
+.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||++|.++|+|.+|+|++++++.+|+.++|+|+..
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~ 279 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAE 279 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEEC
Confidence 45899999999998 6999999999998 78 799999 99999999999999999999999999999999875
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhCCCCccccEEEEeCCCCCCCCCccchHHHHHHH
Q 038104 490 TNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALA 544 (567)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~GKv~r~~l~~~~ 544 (567)
. ..+.++|+++++++|+. ++|..+.++++||+|++||++|+.|++..
T Consensus 280 ~-------~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 280 L-------PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred C-------CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHh
Confidence 2 35678999999999999 99999999999999999999999999876
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.84 E-value=3.4e-19 Score=183.00 Aligned_cols=500 Identities=15% Similarity=0.117 Sum_probs=320.9
Q ss_pred HHHHHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhc
Q 038104 16 PLTFLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLAS-SLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMA 87 (567)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~-~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~ 87 (567)
+..+++..-.+++...|.++.+ ..+||..+..++.++|+ .|.+-|+.++|+|.+++..+ +++++..++|...
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~ 175 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLL 175 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcccccc
Confidence 4445555556777788888743 68999999999999999 66677999999999988764 7999999999999
Q ss_pred cceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHH
Q 038104 88 EAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFV 167 (567)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 167 (567)
|.+++|+++..+.+++..+++..+.+++++.......+.......... ..-.++. ...++...
T Consensus 176 g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~----k~v~~w~-------------t~~~k~~~ 238 (1363)
T KOG3628|consen 176 GIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLA----KAVAWWK-------------TNDFKGNY 238 (1363)
T ss_pred ceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHH----HHHHhhh-------------ccccccee
Confidence 999999999999999999999999999998766544333211000000 0000000 01111000
Q ss_pred hcCCCCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh--------------------hhccCCCCCEE
Q 038104 168 QMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI--------------------LGWEMGSAPVY 227 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~--------------------~~~~~~~~d~~ 227 (567)
. .....-|. ..- ...++-||.+++|.--+++++|+ ++.+.+.+. ..+....++++
T Consensus 239 ~-~~k~~~P~--~~~-~~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~ 313 (1363)
T KOG3628|consen 239 T-KDKIKKPR--MQL-PYGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVL 313 (1363)
T ss_pred e-hhhccCCc--eee-eeEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccce
Confidence 0 00000011 111 26789999999999999999997 433332221 11234556777
Q ss_pred EEecchHhhhhHHH-HHHHHhhCceeeeeCC---CCHHHHHHHHHhcCcceeecchHHHHHHHhc-CC----------cc
Q 038104 228 LWSLPMFHCNGWTF-TWGVAARGGTNVCLRN---TTAYDMYRNISQHRVTHMCCAPIVFNILLQA-KP----------EE 292 (567)
Q Consensus 228 ~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~-~~----------~~ 292 (567)
+.........|+.. .+.+++.|.+...+++ ..|..+.+.+.++|.+++..-...+...... .+ ..
T Consensus 314 l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~ 393 (1363)
T KOG3628|consen 314 LTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYK 393 (1363)
T ss_pred eeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhcc
Confidence 77777777777765 7788899999999887 6888999999999999998876655554322 11 11
Q ss_pred cccCCCceEEEEcCCCCCHHHHHHHHH-h----CC---e--eeccccccccCCCccccc-c---------ccc--cCCCC
Q 038104 293 RKEIASPVQILTGGAPPPASLLEEIEL-L----GF---H--VTHAYGLTEATGPALVCE-W---------QSS--WNQLP 350 (567)
Q Consensus 293 ~~~l~~l~~~~~~g~~l~~~~~~~~~~-~----~~---~--i~~~yG~tE~~~~~~~~~-~---------~~~--~~~~~ 350 (567)
..+++++|.+++....++.+..+-... + |. + .+...-.-+-|++.+... + .+. -.+.+
T Consensus 394 t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~ 473 (1363)
T KOG3628|consen 394 TPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLP 473 (1363)
T ss_pred CCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCc
Confidence 246889999999999999988766542 2 21 1 111222222233322211 0 000 00000
Q ss_pred ------------------Cch--hhhhccccCceeeeecceEEeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhh
Q 038104 351 ------------------KPD--QAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEAT 410 (567)
Q Consensus 351 ------------------~~~--~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 410 (567)
... ...-...+|...++...+.++++++.+.+..+ ++|||||.++....+||.-+..|
T Consensus 474 ~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~~~~al~~~t 551 (1363)
T KOG3628|consen 474 GEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGKLFYALDKQT 551 (1363)
T ss_pred cceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCcccceeeccccc
Confidence 000 01111234555555557778888888888888 99999999999999999887777
Q ss_pred hhccc-------------CCcccCCceEEEecCCcEEEEccCCceee-eCceeechHHH----------HHHHHcCCCce
Q 038104 411 SQSFK-------------NGWFRTGDVGVIHPDGYLEIKDRSKDVII-SGGENISSVEL----------ENVLFRHPRVL 466 (567)
Q Consensus 411 ~~~~~-------------~~~~~TGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~i----------E~~l~~~~~v~ 466 (567)
...|. ..|.|||=+|+++ +|.++++|-.+|.+. +.|.+.+..+| +.+.+..+.|.
T Consensus 552 ~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF 630 (1363)
T KOG3628|consen 552 ENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVF 630 (1363)
T ss_pred cceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEE
Confidence 77762 1289999999998 666777777777776 88888776664 34445568888
Q ss_pred EEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCC-Ccccc---EEEEeCCCCCCCCCccchHHHHH
Q 038104 467 EAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSR-FMVPK---KVVILPELPKTATGKIQKFQLRA 542 (567)
Q Consensus 467 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~~p~---~i~~v~~~P~t~~GKv~r~~l~~ 542 (567)
++.++- .++.++.++.++... +.+.-++...+-+.+.. |++-. .++.-+.+|||+-|-+.-.++++
T Consensus 631 ~~saf~------~E~~~Vv~~esP~a~----e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~ 700 (1363)
T KOG3628|consen 631 DVSAFE------DEHIVVVVLESPDAT----EENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQ 700 (1363)
T ss_pred EEeeee------cceEEEEEEeCcchh----hhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHH
Confidence 988884 223333333333221 22222222222222211 22211 33444689999998899999999
Q ss_pred HHHhhhcc
Q 038104 543 LAKNFAVS 550 (567)
Q Consensus 543 ~~~~~~~~ 550 (567)
+|.+....
T Consensus 701 ~F~~G~L~ 708 (1363)
T KOG3628|consen 701 AFLEGSLP 708 (1363)
T ss_pred HHHcCCCC
Confidence 99886443
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.77 E-value=1.3e-16 Score=158.57 Aligned_cols=241 Identities=14% Similarity=0.114 Sum_probs=156.5
Q ss_pred cEEEEeccCCCCCCceEEechHHHHHHhhHh---hhhccCCCCCEEEEec-chHhhhhHHHHHHHHhhCce-eeeeC-CC
Q 038104 185 PITLNYTSGTTSAPKGVVYSHRGAYLSTLSL---ILGWEMGSAPVYLWSL-PMFHCNGWTFTWGVAARGGT-NVCLR-NT 258 (567)
Q Consensus 185 ~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~---~~~~~~~~~d~~~~~~-p~~~~~g~~~~~~~~~~g~~-~~~~~-~~ 258 (567)
-..+..||||||.|-.+..+.+......... ....+...++++.... .-.+.+ ..+..... +...+ ..
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly------~~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLY------QSVNNRWISLDFFDLLA 174 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHH------HHHHhccceeeecCCCc
Confidence 4567789999999999999998654333222 1222455555555442 111111 11111111 11221 25
Q ss_pred CHHHHHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcCCCCCHHHHHHHH-HhCCeeeccccccccCCCc
Q 038104 259 TAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIE-LLGFHVTHAYGLTEATGPA 337 (567)
Q Consensus 259 ~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~yG~tE~~~~~ 337 (567)
+.+.+++.|++++|+++.++|+.+..|++........ ..++.++++||.++++.++.++ .+|+++++.||+|| |.++
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 6788999999999999999999999999875544333 4789999999999999999998 67999999999999 6565
Q ss_pred cccccccccCCCCCchhhhhccccCceeeee-cceE--EeeCCCCCCcCCCCcceeEEEEecCccchhccCChhhhhhcc
Q 038104 338 LVCEWQSSWNQLPKPDQAKLKARQGISILTL-ADVD--VKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSF 414 (567)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~--i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 414 (567)
+.|..+ +..+... ..++ ++|+++ .++.++|+-. +.....
T Consensus 253 ~eC~~g------------------~lHl~ed~~~vE~~ivD~~~----------~~~~ViT~L~-------n~~~Pl--- 294 (430)
T TIGR02304 253 STCRCG------------------TLHLNEDLVHIEKQYLDEHK----------RFVPIITDFT-------RTTQPI--- 294 (430)
T ss_pred EecCCC------------------CEEEccccEEEEeeEECCCC----------ceEEEEecCC-------CccceE---
Confidence 555321 1111111 1233 455421 1455776522 111111
Q ss_pred cCCcccCCceEEEecC----Cc----E-EEEccCCceeee---Cce--eechHHHHHHHH-cCCCceEEEEEee
Q 038104 415 KNGWFRTGDVGVIHPD----GY----L-EIKDRSKDVIIS---GGE--NISSVELENVLF-RHPRVLEAAVVAM 473 (567)
Q Consensus 415 ~~~~~~TGD~~~~~~~----g~----l-~~~GR~~d~i~~---~G~--~v~~~~iE~~l~-~~~~v~~~~v~~~ 473 (567)
--|+|||++...++ |. + .+.||.+|++++ +|. .++|..++..+. ..++|.++.++..
T Consensus 295 --IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 295 --VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred --EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 12999999887544 22 3 388999999984 454 459999998744 5789999988854
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.30 E-value=4.3e-12 Score=93.73 Aligned_cols=70 Identities=47% Similarity=0.802 Sum_probs=61.4
Q ss_pred HHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHhhCCCCccc--cEEEEeCC-CCCC
Q 038104 454 ELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVP--KKVVILPE-LPKT 530 (567)
Q Consensus 454 ~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p--~~i~~v~~-~P~t 530 (567)
|||++|.++|+|.+|+|++++++.+|++++++++. +.++|+++++++|+.|+.| ..++.+++ ||+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-----------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t 69 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-----------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRT 69 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-----------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBE
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-----------eecccccchhhhCCCcceeeEEEEccccCcCCCC
Confidence 79999999999999999999999999999999987 3388999999999999999 55555577 9999
Q ss_pred CCCc
Q 038104 531 ATGK 534 (567)
Q Consensus 531 ~~GK 534 (567)
++||
T Consensus 70 ~~GK 73 (73)
T PF13193_consen 70 PSGK 73 (73)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.96 E-value=5.2e-08 Score=95.14 Aligned_cols=224 Identities=20% Similarity=0.271 Sum_probs=133.4
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhh---hhcc-CCCC-CEEEEecchHhh-hhHH--H--HHHHHhhCce
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLI---LGWE-MGSA-PVYLWSLPMFHC-NGWT--F--TWGVAARGGT 251 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~---~~~~-~~~~-d~~~~~~p~~~~-~g~~--~--~~~~~~~g~~ 251 (567)
.+++..++.||||||.|--+.+.+..+........ ..+. .... -.++...|-... ..+. + .......+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 44677889999999998767776665544433322 2222 2211 223333333211 1111 1 1122233333
Q ss_pred eeeeC--CCCHHHHHHHHH----hcCcceeecchHHHHHHHhcCCccccc--CC-CceEEEEcC------CCCCH-HHHH
Q 038104 252 NVCLR--NTTAYDMYRNIS----QHRVTHMCCAPIVFNILLQAKPEERKE--IA-SPVQILTGG------APPPA-SLLE 315 (567)
Q Consensus 252 ~~~~~--~~~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~--l~-~l~~~~~~g------~~l~~-~~~~ 315 (567)
..+. ..+.+.++..+. +.++..+++.|.++..++....+.... ++ ..+.+-.|| +.+++ ++.+
T Consensus 168 -~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 168 -FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred -eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 4443 346666665553 557899999999887776654444333 33 344444454 45654 6666
Q ss_pred HHH-HhCC----eeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceEEeeCCCCCCcCCCCccee
Q 038104 316 EIE-LLGF----HVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMG 390 (567)
Q Consensus 316 ~~~-~~~~----~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~~~~G 390 (567)
.+. .+|+ .+++.||+||.....+.+... ..++|. .+.++|+++..+++.| +.|
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~------------------~~~~p~--wV~iRDp~tl~~~~~G--e~G 304 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHG------------------HFHVPP--WVIIRDPETLEPLPPG--ETG 304 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCC------------------cccCCC--eEEEECCCCCcCCCCC--Cee
Confidence 666 4787 699999999988666554211 112333 3788899998888887 889
Q ss_pred EEEEecCccchhccCChhhhhhcccCCcccCCceEEEecC--------CcEEEEccCCc
Q 038104 391 EIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPD--------GYLEIKDRSKD 441 (567)
Q Consensus 391 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~l~~~GR~~d 441 (567)
-|-+-++.... | -+...|.|+|.+..+ ..+.++||.+.
T Consensus 305 li~vidl~~~s-~------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 305 LIQVIDLANTS-Y------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEEcccccC-C------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 99888764321 1 123679999988654 26889999773
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.64 E-value=5.3e-07 Score=93.41 Aligned_cols=177 Identities=15% Similarity=0.170 Sum_probs=96.5
Q ss_pred CCCceEEEEcCCCCCHHHHHHHHH-hC--CeeeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecceE
Q 038104 296 IASPVQILTGGAPPPASLLEEIEL-LG--FHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVD 372 (567)
Q Consensus 296 l~~l~~~~~~g~~l~~~~~~~~~~-~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 372 (567)
.++++.+.+.++.-.....+.++. ++ ..+...|++||+. +.+... +. ...+...+...-++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~-i~i~~~--------~~-------~~~~~l~~~~~ffE 329 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF-IGIPLD--------PE-------DPGYVLAPDSGFFE 329 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE-EEEES---------CC-------C--EEE-TTSSEEE
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE-EEEecC--------CC-------CCceEeecCCeEEE
Confidence 678996666555544455556663 33 3456899999963 322211 00 01122222222333
Q ss_pred EeeCCCC--------C-----CcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEec--CC--cEEE
Q 038104 373 VKNLDTM--------S-----SVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHP--DG--YLEI 435 (567)
Q Consensus 373 i~~~~~~--------~-----~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~l~~ 435 (567)
.++.++. . ++..| +.-||+++.. .|.|+ |+.||+.++.. ++ .+.|
T Consensus 330 Fip~~~~~~~~~~~~~~l~~~ele~G--~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F 391 (528)
T PF03321_consen 330 FIPVDEDEQNPSEQPKTLLLHELEVG--EEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEF 391 (528)
T ss_dssp EEE-STT-------SSSEEGGG--TT---EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEE
T ss_pred EEeccCCcccccCCCceecHHHhcCC--CeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEE
Confidence 3433321 1 23334 6789999864 34444 99999999853 34 7999
Q ss_pred EccCCceeeeCceeechHHHHHHHHcC-----CCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHHHHHHHHHh
Q 038104 436 KDRSKDVIISGGENISSVELENVLFRH-----PRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRE 510 (567)
Q Consensus 436 ~GR~~d~i~~~G~~v~~~~iE~~l~~~-----~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~ 510 (567)
.||.+.++.+.|++++-.+|+.++.+. -.+.+..+...........-+.++++... ..+.+++.+.+.+
T Consensus 392 ~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~------~~~~~~~~~~lD~ 465 (528)
T PF03321_consen 392 VGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE------PDDLEELAKALDE 465 (528)
T ss_dssp EEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-------HHHHHHHHHHHHH
T ss_pred eccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC------chHHHHHHHHHHH
Confidence 999999999999999999999998875 33567777655322223334455555433 2245567777766
Q ss_pred hC
Q 038104 511 NL 512 (567)
Q Consensus 511 ~l 512 (567)
.|
T Consensus 466 ~L 467 (528)
T PF03321_consen 466 SL 467 (528)
T ss_dssp CS
T ss_pred Hh
Confidence 66
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.06 E-value=0.00021 Score=74.54 Aligned_cols=58 Identities=14% Similarity=0.255 Sum_probs=47.8
Q ss_pred ceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEEec----CCcEEEEccCCceeeeCceeechHHHHHHHHc
Q 038104 388 TMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHP----DGYLEIKDRSKDVIISGGENISSVELENVLFR 461 (567)
Q Consensus 388 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 461 (567)
+.-|++++.. .|.|+ |+.||..++.. .-.|.|.||.+.++...|++++-.+++.++.+
T Consensus 395 ~~Y~lVvTT~---~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 395 KEYELVITTY---AGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred CeEEEEEEcc---cceeE-------------eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 6688888852 23333 99999999864 35799999999999999999999999998887
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.90 E-value=0.0018 Score=67.19 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=84.9
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHh--CCeee-ccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecce
Q 038104 295 EIASPVQILTGGAPPPASLLEEIELL--GFHVT-HAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADV 371 (567)
Q Consensus 295 ~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~i~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 371 (567)
-.++++.+.+....-.......++.. |+++. ..|++||+...+-..+.++ +. .......++...+
T Consensus 291 LWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~-------p~-----~~sy~L~p~~~yF 358 (606)
T PLN02247 291 LWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSD-------PS-----DVSYTLLPNMAYF 358 (606)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCC-------cc-----CCceeecCCcEEE
Confidence 35678877775555555556666633 55544 5999999753332211100 00 1112223333344
Q ss_pred EEeeCCCCC-----------------------------CcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCC
Q 038104 372 DVKNLDTMS-----------------------------SVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTG 422 (567)
Q Consensus 372 ~i~~~~~~~-----------------------------~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TG 422 (567)
+.++.+.+. ++..| +.-|++||. ..|.|+ |+.|
T Consensus 359 EFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G--~~YelVvTt---~~GLYR-------------YrlG 420 (606)
T PLN02247 359 EFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVG--HYYELVVTT---FTGLYR-------------YRVG 420 (606)
T ss_pred EEeecCCCcccccccccccccccccccccccCceecHHHccCC--CeEEEEEEe---cCceEE-------------EecC
Confidence 444432221 23334 668888885 223333 9999
Q ss_pred ceEEEe----cCCcEEEEccCCceeeeCceeechHHHHHHHHcC
Q 038104 423 DVGVIH----PDGYLEIKDRSKDVIISGGENISSVELENVLFRH 462 (567)
Q Consensus 423 D~~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 462 (567)
|+.++. ....+.|++|.+.+..+.|.|.+-.++..++.+.
T Consensus 421 Dvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 421 DILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred CEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 999884 3467999999999999999999999998888764
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.90 E-value=0.001 Score=68.72 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=83.7
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHh--CCe-eeccccccccCCCccccccccccCCCCCchhhhhccccCceeeeecce
Q 038104 295 EIASPVQILTGGAPPPASLLEEIELL--GFH-VTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADV 371 (567)
Q Consensus 295 ~l~~l~~~~~~g~~l~~~~~~~~~~~--~~~-i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 371 (567)
-.++++.+.+....-.......++.. +++ +-..|++||+...+-..+.++ +. .......++...+
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~-------p~-----~~sy~L~p~~~yF 369 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCK-------PS-----EVSYTLIPTMAYF 369 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCC-------cc-----cceeeecCCcEEE
Confidence 35678877776555555555666633 555 446899999753332221110 00 0112222333344
Q ss_pred EEeeCCCC------------------------CCcCCCCcceeEEEEecCccchhccCChhhhhhcccCCcccCCceEEE
Q 038104 372 DVKNLDTM------------------------SSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVI 427 (567)
Q Consensus 372 ~i~~~~~~------------------------~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~ 427 (567)
+.++.+.. .++..| +.-|++|+. ..|.|+ |+.||+.++
T Consensus 370 EFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G--~~YelvvTt---~~GLyR-------------YrlGDvv~V 431 (612)
T PLN02620 370 EFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLG--QEYELVVTT---YAGLYR-------------YRVGDVLRV 431 (612)
T ss_pred EEeeccCcccccccccccccccccccCccccHHHccCC--CeEEEEEEe---cCceEE-------------EecCCEEEE
Confidence 44432211 113334 668888885 223333 999999988
Q ss_pred ec----CCcEEEEccCCceeeeCceeechHHHHHHHHcC
Q 038104 428 HP----DGYLEIKDRSKDVIISGGENISSVELENVLFRH 462 (567)
Q Consensus 428 ~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 462 (567)
.. ...+.|++|.+-+..+.|.|.+-.++..++.+.
T Consensus 432 ~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 432 AGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred eeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 53 467999999999889999999999998877764
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.62 E-value=0.00025 Score=55.14 Aligned_cols=87 Identities=20% Similarity=0.308 Sum_probs=49.9
Q ss_pred ceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCC--CCCCCHHHHHHHHHhhCCCCccccEEEEe
Q 038104 447 GENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGK--TDDVNEADILSYCRENLSRFMVPKKVVIL 524 (567)
Q Consensus 447 G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~~~p~~i~~v 524 (567)
|.+++|..||++|.++|++...+.+.+......+.+.+.|+..++..+. .......+|.+.+++.+.- .| .+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 7899999999999999999944444454444566777888887754100 0001124455555665532 22 45555
Q ss_pred C--CCCCCCCCccch
Q 038104 525 P--ELPKTATGKIQK 537 (567)
Q Consensus 525 ~--~~P~t~~GKv~r 537 (567)
+ +|||+ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 4 79998 688766
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.09 E-value=0.065 Score=53.21 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=78.5
Q ss_pred eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 39 RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
.+|+.|....+..+|+.|...|..+||+|.+...-+ ..-+...+|+.++|+.++|+.+. .-+.-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 599999999999999999999999999988866511 12267788999999999999883 355667889999999999
Q ss_pred EcccchHHHHHHhhhhh
Q 038104 117 VDCQYVQLAREALKLYF 133 (567)
Q Consensus 117 ~~~~~~~~~~~~~~~~~ 133 (567)
+.+.+...+.+.+....
T Consensus 188 ~tps~~l~lae~~~~~G 204 (438)
T COG1541 188 ATPSYLLYLAEEAEEEG 204 (438)
T ss_pred EChHHHHHHHHHHHHcC
Confidence 99998888877776553
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=91.73 E-value=2.4 Score=43.64 Aligned_cols=87 Identities=9% Similarity=-0.027 Sum_probs=65.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH--HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA--MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
.-+|..++...+..++..+...|+++||++.+..+.+.. .....+++...|+.+++... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 358999999998888988888999999999988776542 23455788899998876543 2345778899999999
Q ss_pred EEcccchHHHHH
Q 038104 116 FVDCQYVQLARE 127 (567)
Q Consensus 116 i~~~~~~~~~~~ 127 (567)
++.....-.+.+
T Consensus 181 ~~~ps~ll~La~ 192 (445)
T TIGR03335 181 VASVFKLLRLAR 192 (445)
T ss_pred EECHHHHHHHHH
Confidence 887665444433
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=91.32 E-value=2.4 Score=43.21 Aligned_cols=90 Identities=10% Similarity=0.061 Sum_probs=68.9
Q ss_pred eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 39 RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
.+|..++......++..+...|+++||++....+.+. ......++....|+..+++++.. .+.+...++..++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4788888777777788888889999998877655432 22334567888999998887654 57889999999999999
Q ss_pred EcccchHHHHHHh
Q 038104 117 VDCQYVQLAREAL 129 (567)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (567)
+.+.....+.+..
T Consensus 173 ~~Ps~l~~L~~~~ 185 (422)
T TIGR02155 173 VTPSYMLNLLEEL 185 (422)
T ss_pred EcHHHHHHHHHHH
Confidence 9988777665543
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=84.05 E-value=5.8 Score=36.42 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=53.6
Q ss_pred CceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 29 NRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 29 ~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
+.+|++....-.|.+.+...+ ...|++++|++. .+|-.- .+...+++++..|+..+.+ +.++++++...
T Consensus 150 ~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~ 220 (227)
T TIGR03089 150 TAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQI 220 (227)
T ss_pred CcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHH
Confidence 455554433334444444332 556889999998 888643 4445789999999998887 68999999999
Q ss_pred HHhcCc
Q 038104 107 LRHSEA 112 (567)
Q Consensus 107 l~~~~~ 112 (567)
+++.++
T Consensus 221 i~~~~v 226 (227)
T TIGR03089 221 AETERV 226 (227)
T ss_pred HHhhcC
Confidence 988775
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.02 E-value=18 Score=37.89 Aligned_cols=86 Identities=13% Similarity=0.020 Sum_probs=65.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..+... .+++++|++...+|..- .+...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 468999887666554443 37889999988877643 3455678899999988765 56788999999999999999
Q ss_pred EEcccchHHHHH
Q 038104 116 FVDCQYVQLARE 127 (567)
Q Consensus 116 i~~~~~~~~~~~ 127 (567)
...+.....+..
T Consensus 260 ~~~p~~~~~l~~ 271 (513)
T PRK07656 260 PGPPTMYNSLLQ 271 (513)
T ss_pred echHHHHHHHHc
Confidence 988876665543
No 144
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=77.79 E-value=38 Score=34.38 Aligned_cols=83 Identities=10% Similarity=0.084 Sum_probs=66.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
.++|--++.+.+..++..+ |+...+++++-.|= +.-.++..+|++..|++.|.-.|.+.+..+...+.+.++..+
T Consensus 252 atLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l 328 (596)
T KOG1177|consen 252 ATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTL 328 (596)
T ss_pred eeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEE
Confidence 6899999999998888766 66554454443332 445677788999999999999999999999999999999999
Q ss_pred EEcccchH
Q 038104 116 FVDCQYVQ 123 (567)
Q Consensus 116 i~~~~~~~ 123 (567)
+..+...-
T Consensus 329 ~gtPtM~~ 336 (596)
T KOG1177|consen 329 YGTPTMFV 336 (596)
T ss_pred ecChHHHH
Confidence 99876433
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.60 E-value=36 Score=35.57 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=64.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH-HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP-AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|+..+...+..... ..+++++|++....|... ......++++..|+..+..+.. +.+.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 35889988876666555 447889999888877643 2233445578899988877654 889999999999999999
Q ss_pred EcccchHHHHH
Q 038104 117 VDCQYVQLARE 127 (567)
Q Consensus 117 ~~~~~~~~~~~ 127 (567)
+.+.....+..
T Consensus 261 ~~p~~~~~l~~ 271 (521)
T PRK06187 261 AVPTIWQMLLK 271 (521)
T ss_pred chHHHHHHHHc
Confidence 98887665544
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=73.09 E-value=38 Score=35.91 Aligned_cols=83 Identities=7% Similarity=0.040 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..+... .+++++|++....|- ...++..+++.+..|+..+......++..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 468888887665554433 478999998877775 345556678888999888866667788899999999999999
Q ss_pred EEcccchH
Q 038104 116 FVDCQYVQ 123 (567)
Q Consensus 116 i~~~~~~~ 123 (567)
+..+..+.
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 88776544
No 147
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=71.15 E-value=45 Score=35.26 Aligned_cols=98 Identities=7% Similarity=0.058 Sum_probs=68.6
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.+|++.. +..+|++.+...+.... ...+++++|++...+|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 3566776652 24689988876654443 335678899888777743 223334566778888877665
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHHHHH
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQLARE 127 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (567)
...+++.+...++..++.++...+.....+..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 56788999999999999999998887665543
No 148
>PRK12583 acyl-CoA synthetase; Provisional
Probab=70.80 E-value=45 Score=35.31 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=62.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..+...+ +++++|++....|- ....+..+++++..|+.++......++..+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 4689988876666555443 78899998777664 345666678888899888755556788889999999999999
Q ss_pred EEcccch
Q 038104 116 FVDCQYV 122 (567)
Q Consensus 116 i~~~~~~ 122 (567)
+..+...
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8877654
No 149
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=68.00 E-value=39 Score=34.35 Aligned_cols=83 Identities=7% Similarity=0.049 Sum_probs=62.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH-HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP-AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|+..+...+..+...+ +++++|++...+|-.. ..+..+++.+..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4789999988777766554 7899999888777532 2334567888999988876543 3888899999999999
Q ss_pred EcccchHHHH
Q 038104 117 VDCQYVQLAR 126 (567)
Q Consensus 117 ~~~~~~~~~~ 126 (567)
..+..+..+.
T Consensus 203 ~~P~~l~~l~ 212 (436)
T TIGR01923 203 LVPTQLNRLL 212 (436)
T ss_pred eHHHHHHHHH
Confidence 8887655443
No 150
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=67.01 E-value=51 Score=35.10 Aligned_cols=86 Identities=12% Similarity=-0.031 Sum_probs=63.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH--HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA--MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+.... ...+++++|++....+.... ....+++.+..|+..+......+++.+...+++.++.++
T Consensus 223 V~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 4688887765443333 33578889987666655432 244567888999988877777889999999999999999
Q ss_pred EEcccchHHHH
Q 038104 116 FVDCQYVQLAR 126 (567)
Q Consensus 116 i~~~~~~~~~~ 126 (567)
...+.....+.
T Consensus 300 ~~~P~~~~~l~ 310 (570)
T PRK04319 300 YTAPTAIRMLM 310 (570)
T ss_pred EeCHHHHHHHH
Confidence 99887766554
No 151
>PLN03051 acyl-activating enzyme; Provisional
Probab=66.40 E-value=39 Score=35.28 Aligned_cols=86 Identities=9% Similarity=-0.047 Sum_probs=59.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH-HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|...+...+.... ...+++++|++...+|-+-. ....+++++..|+..+..+.....+.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 4678776655433322 33478889987666654321 1235677889999988776556678899999999999999
Q ss_pred EcccchHHHH
Q 038104 117 VDCQYVQLAR 126 (567)
Q Consensus 117 ~~~~~~~~~~ 126 (567)
..+..+..+.
T Consensus 214 ~vP~~~~~l~ 223 (499)
T PLN03051 214 LVPSIVKAWR 223 (499)
T ss_pred eCHHHHHHHH
Confidence 9887766543
No 152
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=66.27 E-value=70 Score=26.59 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=56.6
Q ss_pred EEEEecch-HhhhhHHHHHHHH-hhCceeeeeC-CCCHHHHHHHHHhcCcceeecch------HHHHHHHhcCCcccccC
Q 038104 226 VYLWSLPM-FHCNGWTFTWGVA-ARGGTNVCLR-NTTAYDMYRNISQHRVTHMCCAP------IVFNILLQAKPEERKEI 296 (567)
Q Consensus 226 ~~~~~~p~-~~~~g~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p------~~~~~l~~~~~~~~~~l 296 (567)
+++...+- .|..|...+...+ ..|..++... ..+++++.+.+.+++|+++..+- ..+..+.+.... ..+
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~--~~~ 83 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIE--AGL 83 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh--cCC
Confidence 34444433 7777776544444 4566666664 46789999999999999877653 122333322211 123
Q ss_pred CCceEEEEcCCCC-----CHHHHHHHHHhCCeeeccccc
Q 038104 297 ASPVQILTGGAPP-----PASLLEEIELLGFHVTHAYGL 330 (567)
Q Consensus 297 ~~l~~~~~~g~~l-----~~~~~~~~~~~~~~i~~~yG~ 330 (567)
+.+ .+++||... +.+..+.+++.| +-..|+.
T Consensus 84 ~~~-~i~vGG~~~~~~~~~~~~~~~l~~~G--~~~vf~~ 119 (137)
T PRK02261 84 GDI-LLYVGGNLVVGKHDFEEVEKKFKEMG--FDRVFPP 119 (137)
T ss_pred CCC-eEEEECCCCCCccChHHHHHHHHHcC--CCEEECc
Confidence 344 466677553 344555666666 3344543
No 153
>PLN02736 long-chain acyl-CoA synthetase
Probab=66.15 E-value=1.2e+02 Score=32.89 Aligned_cols=100 Identities=14% Similarity=-0.012 Sum_probs=70.5
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...++-..... ...++++..|+..+.+. ..+++++...++..+++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 45788888776655544 458999999998887644322 23566777788877664 56889999999999999999
Q ss_pred cchHHHHHHHhcCCcccccCCCceEEEEc
Q 038104 277 CAPIVFNILLQAKPEERKEIASPVQILTG 305 (567)
Q Consensus 277 ~~p~~~~~l~~~~~~~~~~l~~l~~~~~~ 305 (567)
+.+..+..+.... ..++.++.++..
T Consensus 156 ~~~~~~~~~~~~~----~~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCL----SEIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHh----hcCCCceEEEEE
Confidence 9988777665432 123455555543
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=66.05 E-value=27 Score=34.61 Aligned_cols=78 Identities=14% Similarity=0.045 Sum_probs=54.6
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEEc-----
Q 038104 49 CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFVD----- 118 (567)
Q Consensus 49 v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~----- 118 (567)
...+.-.|+.+++++||-|.+ .+.-|+++.-++...|+.+|.+|-+ .+++.++..+... .|+||.-
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 345556667778999995543 3556899999999999999998753 5788888888775 6666652
Q ss_pred ccchHHHHHHhh
Q 038104 119 CQYVQLAREALK 130 (567)
Q Consensus 119 ~~~~~~~~~~~~ 130 (567)
.--++.+.++.+
T Consensus 135 ~~dm~~i~~la~ 146 (374)
T COG0399 135 PCDMDAIMALAK 146 (374)
T ss_pred CCCHHHHHHHHH
Confidence 223445555543
No 155
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=65.46 E-value=90 Score=33.17 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=68.2
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH-HHHHHHHHhhhccceeeeccC
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP-AMYEMHFAVPMAEAVLNTINV 96 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 96 (567)
.++.++++.. +..+|...+...+..... ..+++++|++....|-.- ..+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 3566666541 146888887655444332 357889998877777432 2233467778889887765 5
Q ss_pred CCChHHHHHHHHhcCceEEEEcccchHHHHHH
Q 038104 97 RLDAKNVASILRHSEAKVFFVDCQYVQLAREA 128 (567)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (567)
..++..+...+++.++.++...+.....+...
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 277 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLISL 277 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHh
Confidence 67889999999999999999988877666543
No 156
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=64.72 E-value=1.3e+02 Score=31.01 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=38.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccC-CCChHHHHHHHHhcCceEEEEccc
Q 038104 61 MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINV-RLDAKNVASILRHSEAKVFFVDCQ 120 (567)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ii~~~~ 120 (567)
+++||+|++=.| +.......+-...+..+.||++. ....+.+...++..+++++++.+.
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 457887776555 33333444444444444445543 468899999999999999999654
No 157
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=64.01 E-value=74 Score=31.89 Aligned_cols=99 Identities=16% Similarity=0.081 Sum_probs=72.6
Q ss_pred CCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH-HHHHHHHhhhccceeeeccCC
Q 038104 28 GNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINVR 97 (567)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 97 (567)
++.++++.. ...+|+..+...+..+.. ..+++++|++....|.... .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 456666642 146788888877776655 3367789988887776543 455567788889888877665
Q ss_pred CC--hHHHHHHHHhcCceEEEEcccchHHHHHHh
Q 038104 98 LD--AKNVASILRHSEAKVFFVDCQYVQLAREAL 129 (567)
Q Consensus 98 ~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (567)
.. ...+..+++..++..+++.+.....+.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~ 229 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAAL 229 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhh
Confidence 54 788999999999999999998887766543
No 158
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=63.32 E-value=51 Score=34.44 Aligned_cols=85 Identities=8% Similarity=-0.071 Sum_probs=65.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH-HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|+..+...+..+...+ +++++|++...+|-... .+..+++++..|+..+.. +..+++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4689888887776665443 57889999888876432 344567888999988865 457889999999999999999
Q ss_pred EcccchHHHH
Q 038104 117 VDCQYVQLAR 126 (567)
Q Consensus 117 ~~~~~~~~~~ 126 (567)
+.+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 9888766554
No 159
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=63.09 E-value=80 Score=32.62 Aligned_cols=85 Identities=9% Similarity=0.081 Sum_probs=61.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH-HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP-AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|++.+...+.... ...+++++|++...+|-.- ..+..+++.+..|+.++..+ ..+..++...+++.++.++.
T Consensus 159 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 3688887765543332 2358899999988887532 22334567778898877654 57889999999999999999
Q ss_pred EcccchHHHH
Q 038104 117 VDCQYVQLAR 126 (567)
Q Consensus 117 ~~~~~~~~~~ 126 (567)
..+.....+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 9888766554
No 160
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=58.33 E-value=2.2e+02 Score=29.15 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEEc
Q 038104 59 LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFVD 118 (567)
Q Consensus 59 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (567)
.++++||.|++-.+.. .....++...|+.++.++.. .+.+.+...+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999887765543 44455666778888776543 356677776643 56666664
No 161
>PRK06164 acyl-CoA synthetase; Validated
Probab=57.80 E-value=94 Score=32.73 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=70.3
Q ss_pred CCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh-HHHHHHHHHhhhccceeeeccCC
Q 038104 28 GNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI-PAMYEMHFAVPMAEAVLNTINVR 97 (567)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~ 97 (567)
++.++++.. +..+|...+...+..++..+ +++++|++...+|-+ .-.+..+++.+..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 466777662 14688888877776666555 678999888887763 22334567888888887765 56
Q ss_pred CChHHHHHHHHhcCceEEEEcccchHHHHH
Q 038104 98 LDAKNVASILRHSEAKVFFVDCQYVQLARE 127 (567)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (567)
.....+...+++.++.+++..+..+..+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 778899999999999999988877665544
No 162
>PRK08308 acyl-CoA synthetase; Validated
Probab=57.40 E-value=1.3e+02 Score=30.26 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..+...+ ++..+|++...+|.. ..++..++..+..|+..+..+ ..++..+...++..++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 4689998887666555443 567888877777654 344566788889999887664 4567888899999999999
Q ss_pred EEcccchHHHHH
Q 038104 116 FVDCQYVQLARE 127 (567)
Q Consensus 116 i~~~~~~~~~~~ 127 (567)
+..+..+..+..
T Consensus 195 ~~~P~~~~~l~~ 206 (414)
T PRK08308 195 YAVPLMLHILGR 206 (414)
T ss_pred EcCHHHHHHHHh
Confidence 888776665543
No 163
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.05 E-value=68 Score=30.82 Aligned_cols=73 Identities=11% Similarity=0.139 Sum_probs=57.2
Q ss_pred HHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhh
Q 038104 55 SLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALK 130 (567)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 130 (567)
-|.+.|++||..|+|..--+.-.+...+|. ..|..+..++...+ .-++.++..++...+...+..+...++.+
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AK-AMG~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAK-AMGMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHH-HhCcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 466779999999999999999999999998 67888887876643 23567788999999987766565555544
No 164
>PRK08316 acyl-CoA synthetase; Validated
Probab=56.83 E-value=1.1e+02 Score=31.90 Aligned_cols=84 Identities=10% Similarity=-0.014 Sum_probs=61.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+. ......+++++|++...+|-. ..+...+++++..|+..++.+ ..+.+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~~---~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEYV---SCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHHH---HHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 4688888765533 344455789999988877653 233445667788999988764 4578899999999999999
Q ss_pred EEcccchHHH
Q 038104 116 FVDCQYVQLA 125 (567)
Q Consensus 116 i~~~~~~~~~ 125 (567)
.+.+..+..+
T Consensus 265 ~~~P~~~~~l 274 (523)
T PRK08316 265 FAPPTVWISL 274 (523)
T ss_pred EeCHHHHHHH
Confidence 9887765443
No 165
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=56.74 E-value=39 Score=33.61 Aligned_cols=64 Identities=20% Similarity=0.180 Sum_probs=43.8
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEEc
Q 038104 51 RLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFVD 118 (567)
Q Consensus 51 ~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (567)
.+-..|...|+++||.|++-.-. +....-|+..+|+.++.++-+ .+++.+...+..-. ++|+..
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~t---~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAYT---FPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESSS----THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHhcCCCcCceEecCCCc---chHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 44555667899999988876444 667778888999999988764 56788888876543 555553
No 166
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=56.41 E-value=1.7e+02 Score=27.06 Aligned_cols=91 Identities=10% Similarity=-0.038 Sum_probs=58.1
Q ss_pred CCceEEEeCCee--eeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 28 GNRTSIIYEGAR--FNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 28 p~~~a~~~~~~~--~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
..++++-.++.. -|+++- .+..+...+.+.|..+++.|..... +-....+.++|...|..++.+-|...+..-..
T Consensus 14 ~~~l~~K~e~~~ptgS~K~R--~a~~~l~~a~~~g~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~ 90 (244)
T cd00640 14 GANIYLKLEFLNPTGSFKDR--GALNLILLAEEEGKLPKGVIIESTG-GNTGIALAAAAARLGLKCTIVMPEGASPEKVA 90 (244)
T ss_pred CCEEEEEecccCCcCCcHHH--HHHHHHHHHHHcCCCCCCEEEEeCC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 346666665543 334322 2223333344444334565555443 55566666777789998888888777788888
Q ss_pred HHHhcCceEEEEcccc
Q 038104 106 ILRHSEAKVFFVDCQY 121 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~~ 121 (567)
.++..+++++.++...
T Consensus 91 ~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 91 QMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHHCCCEEEEECCCH
Confidence 8999999999998764
No 167
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=56.30 E-value=1.5e+02 Score=28.09 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC----ChHHHHHHHHhcCce
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL----DAKNVASILRHSEAK 113 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~ 113 (567)
..+-.+-+. |...+|..|.++| -.|.+++.+....... .+...|..+..++-.. ..+++..+++..+++
T Consensus 10 ~~iG~GHv~-Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHVM-RCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHHH-HHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 444444443 5678999997754 4577777665444333 3357777776665432 345788999999999
Q ss_pred EEEEccc-chHHHHHHhhhhhccccCCCCCeEEEEeCCC
Q 038104 114 VFFVDCQ-YVQLAREALKLYFVEDRDAAGPRVILIDDID 151 (567)
Q Consensus 114 ~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 151 (567)
++|+|.- ........++. ....++.+++..
T Consensus 83 ~vV~D~y~~~~~~~~~~k~--------~~~~l~~iDD~~ 113 (279)
T TIGR03590 83 ILIVDHYGLDADWEKLIKE--------FGRKILVIDDLA 113 (279)
T ss_pred EEEEcCCCCCHHHHHHHHH--------hCCeEEEEecCC
Confidence 9999864 22233333321 346777887753
No 168
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.81 E-value=2.2e+02 Score=28.39 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=37.9
Q ss_pred HHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEEc
Q 038104 56 LRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFVD 118 (567)
Q Consensus 56 L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (567)
+...++++||.|++-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 344578999988775543 444556667789888877643 345667766643 56666653
No 169
>PLN03052 acetate--CoA ligase; Provisional
Probab=54.64 E-value=1.2e+02 Score=33.53 Aligned_cols=97 Identities=6% Similarity=0.018 Sum_probs=66.9
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CC
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RN 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 257 (567)
++.+|++....+..+.+ ...+|.+.+...+..... ..+++++|++...+|..-.. ...++.+...|+..+.+ +.
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~-via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA-VIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeCCC
Confidence 45666554332221222 245788888766655443 45899999999999864333 33456777778877766 46
Q ss_pred CCHHHHHHHHHhcCcceeecchH
Q 038104 258 TTAYDMYRNISQHRVTHMCCAPI 280 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p~ 280 (567)
+.++++...+++.++..+++...
T Consensus 267 ~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 267 FAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 78999999999999999988654
No 170
>PRK06188 acyl-CoA synthetase; Validated
Probab=54.60 E-value=1.3e+02 Score=31.45 Aligned_cols=85 Identities=7% Similarity=0.004 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (567)
..+|+..+...+.... ...+++.+|++...+|-+-.+...+++.+..|+..+..+ ..++..+...+++.++.++..
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 4588887776554333 345788899998888876555556677788898877665 467889999999999999998
Q ss_pred cccchHHHH
Q 038104 118 DCQYVQLAR 126 (567)
Q Consensus 118 ~~~~~~~~~ 126 (567)
.+..+..+.
T Consensus 262 ~P~~l~~l~ 270 (524)
T PRK06188 262 VPTMIYALL 270 (524)
T ss_pred hHHHHHHHH
Confidence 877655443
No 171
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=54.48 E-value=1e+02 Score=31.08 Aligned_cols=88 Identities=10% Similarity=-0.032 Sum_probs=63.5
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR- 256 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~- 256 (567)
.++.+|++. -..-.+|.+.+...+..... ..++++++++....+-.. ..+...++++..|+..+.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc-eeeeeeccccccccccccccc
Confidence 455666655 23457788888766655443 457889999888887643 23445677788899988885
Q ss_pred CCCHHHHHHHHHhcCcceeec
Q 038104 257 NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~l~~ 277 (567)
....+.+...+++.+++.+++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 568889999999999999996
No 172
>PRK11761 cysM cysteine synthase B; Provisional
Probab=54.47 E-value=1.5e+02 Score=28.41 Aligned_cols=87 Identities=7% Similarity=-0.030 Sum_probs=59.7
Q ss_pred ceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 30 RTSIIYEG--ARFNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 30 ~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
++++-.++ .+=||++ +.+..+...+.+.| +++|++|... ..+=.-..+.++|...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 56666654 4455555 33444444445555 4777776553 44445666667788899988888887767788889
Q ss_pred HHhcCceEEEEcc
Q 038104 107 LRHSEAKVFFVDC 119 (567)
Q Consensus 107 l~~~~~~~ii~~~ 119 (567)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 173
>PRK09274 peptide synthase; Provisional
Probab=54.31 E-value=1.3e+02 Score=31.68 Aligned_cols=79 Identities=8% Similarity=0.006 Sum_probs=57.7
Q ss_pred eEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCccee
Q 038104 200 GVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHM 275 (567)
Q Consensus 200 ~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l 275 (567)
...+|.+.+...+..... ..+++++|++...++-...+ ....+.++..|+..+.++ ....+++...+++.++..+
T Consensus 39 ~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 117 (552)
T PRK09274 39 YDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAF 117 (552)
T ss_pred cCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEE
Confidence 336788888766655444 34789999999988764333 334667778888877775 4677888899999999998
Q ss_pred ecch
Q 038104 276 CCAP 279 (567)
Q Consensus 276 ~~~p 279 (567)
+..+
T Consensus 118 i~~~ 121 (552)
T PRK09274 118 IGIP 121 (552)
T ss_pred Eecc
Confidence 8754
No 174
>PRK07529 AMP-binding domain protein; Validated
Probab=53.88 E-value=1.1e+02 Score=33.23 Aligned_cols=97 Identities=10% Similarity=0.021 Sum_probs=64.1
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN 257 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~ 257 (567)
.++.+|++....+.. ..+...+|.+.+...+..... ..+++++|++...+|-...+ ...++.+...|..+.+.+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~~pi~~~ 115 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGIANPINPL 115 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEEEeCCCc
Confidence 345666655433211 123457888888766655443 45789999999999865443 3345566666754333356
Q ss_pred CCHHHHHHHHHhcCcceeecch
Q 038104 258 TTAYDMYRNISQHRVTHMCCAP 279 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p 279 (567)
.+++++...+++.+++.+++..
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEeC
Confidence 7889999999999999998853
No 175
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=53.83 E-value=75 Score=23.10 Aligned_cols=65 Identities=6% Similarity=0.086 Sum_probs=50.8
Q ss_pred eeeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceE
Q 038104 39 RFNWLQTYDRCRRLAS---SLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKV 114 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~---~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (567)
..||++|.+.-..++. .|....++..|-|+|+.=++.. ..-++.++-..+.+++...++..++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 5799999888776554 4556688899999999877632 345567888889999999999998875
No 176
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=53.29 E-value=1.3e+02 Score=32.67 Aligned_cols=78 Identities=9% Similarity=0.002 Sum_probs=59.7
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CCCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RNTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...+|..-.. +..++.+...|+..+.+ +.+.++++...+++.+++.++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 56899988776665544 45899999999999875433 23456677778776666 467899999999999999998
Q ss_pred cch
Q 038104 277 CAP 279 (567)
Q Consensus 277 ~~p 279 (567)
+..
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 177
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=53.27 E-value=1.1e+02 Score=32.31 Aligned_cols=87 Identities=10% Similarity=-0.009 Sum_probs=66.5
Q ss_pred eEEechHHHHHHhhHhhhhc-----cCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcc
Q 038104 200 GVVYSHRGAYLSTLSLILGW-----EMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVT 273 (567)
Q Consensus 200 ~v~~~~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t 273 (567)
+..+|++.+...+.+....+ +.+.+|++....|-...+.. ..++++..|+...... ..+..++...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~-~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE-LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 77899999887777766544 36789999999997554332 3456677777766664 57899999999999999
Q ss_pred eeecchHHHHHHHh
Q 038104 274 HMCCAPIVFNILLQ 287 (567)
Q Consensus 274 ~l~~~p~~~~~l~~ 287 (567)
++++....+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998877777643
No 178
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=52.96 E-value=1.4e+02 Score=29.67 Aligned_cols=62 Identities=10% Similarity=0.011 Sum_probs=47.4
Q ss_pred hCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcc
Q 038104 58 SLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 58 ~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (567)
+.| +++|....|-...+-.-+.+.++|...|..+..+-|...+.+-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885444445556666777778889999999888887777778999999999999974
No 179
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=52.56 E-value=1.2e+02 Score=33.48 Aligned_cols=82 Identities=9% Similarity=0.068 Sum_probs=58.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..+... .++.++|++...+|- ...+...+++.+..|+..+..+.......+...+++.++..+
T Consensus 383 v~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 468998887766655433 478899998887775 234445677888899988866654555677788888999888
Q ss_pred EEcccch
Q 038104 116 FVDCQYV 122 (567)
Q Consensus 116 i~~~~~~ 122 (567)
...+...
T Consensus 460 ~~~p~~~ 466 (718)
T PRK08043 460 FGTSTFL 466 (718)
T ss_pred EchHHHH
Confidence 7765543
No 180
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=51.66 E-value=44 Score=27.77 Aligned_cols=43 Identities=5% Similarity=-0.048 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---hHHHHHHHHHhhhccceee
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPN---IPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~---~~~~~~~~lA~~~~G~~~v 92 (567)
..++..|.+.|+.+++.|.+++.. +.....+++++..+|..-+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 478888999999999999999975 5666667777888886644
No 181
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.39 E-value=1.5e+02 Score=31.13 Aligned_cols=94 Identities=15% Similarity=0.027 Sum_probs=66.5
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.+|++.. +..+|+..+...+...... .+++++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 3466766652 1468888887766554433 3578899887776643 234456678889999888775
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHH
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
..+...+...++..++.++...+.....
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 292 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVD 292 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHH
Confidence 5678889999999999998887765443
No 182
>PRK07638 acyl-CoA synthetase; Validated
Probab=50.37 E-value=1.2e+02 Score=31.45 Aligned_cols=86 Identities=6% Similarity=-0.002 Sum_probs=62.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH-HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|...+...+...+. ..+++++|++....+-... ++...+..+..|+..+.. +..++.++...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 46888777666554433 3468899988876655432 345556677889888755 567889999999999999999
Q ss_pred EcccchHHHHH
Q 038104 117 VDCQYVQLARE 127 (567)
Q Consensus 117 ~~~~~~~~~~~ 127 (567)
..+.....+..
T Consensus 237 ~~P~~~~~l~~ 247 (487)
T PRK07638 237 TVPTMLESLYK 247 (487)
T ss_pred eCcHHHHHHHh
Confidence 98887765543
No 183
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=50.35 E-value=1.5e+02 Score=30.85 Aligned_cols=95 Identities=15% Similarity=0.059 Sum_probs=66.7
Q ss_pred CCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH--HHHHHHHhhhccceeeeccC
Q 038104 28 GNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA--MYEMHFAVPMAEAVLNTINV 96 (567)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (567)
++.++++.. +..+|++.+...+.... ....+++++|++...+|-... +...+++.+..|+..+..+.
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 237 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE 237 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC
Confidence 556666552 24688888776554322 233478999988777775433 33456667888988887776
Q ss_pred CCChHHHHHHHHhcCceEEEEcccchHH
Q 038104 97 RLDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
..+.+.+...+++.++.++.+.+..+..
T Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 238 RPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 6788999999999999999998865443
No 184
>PLN02246 4-coumarate--CoA ligase
Probab=50.24 E-value=1.3e+02 Score=31.59 Aligned_cols=98 Identities=6% Similarity=0.046 Sum_probs=67.4
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeec
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLR-SLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTI 94 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~-~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l 94 (567)
.|++++++.. +..+|+..+...+.....+.. ..++.++|++....|-.- .+...+++.+..|+.++..
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 256 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIM 256 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEe
Confidence 3566666541 246888888766555433322 357889998888777532 2334467778899998877
Q ss_pred cCCCChHHHHHHHHhcCceEEEEcccchHHH
Q 038104 95 NVRLDAKNVASILRHSEAKVFFVDCQYVQLA 125 (567)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (567)
+ ..+.+.+...++..++.++...+.....+
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 257 P-KFEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred C-CCCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 5 46788899999999999988877654443
No 185
>PLN02565 cysteine synthase
Probab=49.66 E-value=2.6e+02 Score=27.27 Aligned_cols=89 Identities=10% Similarity=-0.067 Sum_probs=59.2
Q ss_pred ceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 30 RTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 30 ~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
++++-.+. .+-||++ +-+..+-..+.+.|. .+|....+-...+=.-+...++|..+|..++.+-|...+..-...
T Consensus 31 ~i~~K~E~~nPtGSfKd--R~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKD--RIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHH--HHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 46665544 3445554 233333444445564 788553444444445556667778899999988888888888999
Q ss_pred HHhcCceEEEEccc
Q 038104 107 LRHSEAKVFFVDCQ 120 (567)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (567)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 186
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=49.61 E-value=2e+02 Score=34.34 Aligned_cols=98 Identities=12% Similarity=-0.015 Sum_probs=69.4
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHH-HHHHHhhhccceeeeccC
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMY-EMHFAVPMAEAVLNTINV 96 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~ 96 (567)
.|+.+|++.. +..+|.+.+...+.... ...+++++|++...++-+.+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 3556666541 24688887765544333 3357899999998888765543 345777889999887765
Q ss_pred C--CChHHHHHHHHhcCceEEEEcccchHHHHH
Q 038104 97 R--LDAKNVASILRHSEAKVFFVDCQYVQLARE 127 (567)
Q Consensus 97 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (567)
. .+++.+...+++.++.++...+..+..+..
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 3 467889999999999999888876665543
No 187
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=48.47 E-value=2.3e+02 Score=27.47 Aligned_cols=90 Identities=12% Similarity=0.003 Sum_probs=59.8
Q ss_pred CCceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 28 GNRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 28 p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
+.++++-.++ ..=|+++- .+..+-..+.+.|..+++.|.... .+-.-..+.++|...|..++.+-|...+.....
T Consensus 15 g~~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 91 (316)
T cd06448 15 GCNVFLKLENLQPSGSFKIR--GIGHLCQKSAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVE 91 (316)
T ss_pred CCeEEEEeccCCCcCChHHH--HHHHHHHHHHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 4467776654 34555542 222222233334444566665555 355566667888899999998888877788899
Q ss_pred HHHhcCceEEEEccc
Q 038104 106 ILRHSEAKVFFVDCQ 120 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (567)
.++..++++++++..
T Consensus 92 ~l~~~GA~v~~~~~~ 106 (316)
T cd06448 92 KLRDEGATVVVHGKV 106 (316)
T ss_pred HHHHcCCEEEEECCc
Confidence 999999999999765
No 188
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=47.92 E-value=1.9e+02 Score=31.84 Aligned_cols=102 Identities=7% Similarity=-0.019 Sum_probs=72.1
Q ss_pred eEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCccee
Q 038104 200 GVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHM 275 (567)
Q Consensus 200 ~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l 275 (567)
-..+|.+.+...+..... ..+++++|++...++-.... +...++++..|+..+.+. ...++++...++..+++.+
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 356788888766655544 45889999999888754332 234566777888887664 5788899999999999999
Q ss_pred ecchHHHHHHHhcCCcccccCCCceEEEEcC
Q 038104 276 CCAPIVFNILLQAKPEERKEIASPVQILTGG 306 (567)
Q Consensus 276 ~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g 306 (567)
++....+..+.... ..++.++.+++-+
T Consensus 183 i~~~~~~~~l~~~~----~~~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDIS----SQLETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHHh----hccCCceEEEEEC
Confidence 99988887775532 2334566655543
No 189
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=47.81 E-value=3.1e+02 Score=27.66 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHH---------HhhhccceeeeccC---CCChHHHHHHHHhcCceEEEEcccc------h
Q 038104 61 MPKHSVVSVLAPNIPAMYEMHF---------AVPMAEAVLNTINV---RLDAKNVASILRHSEAKVFFVDCQY------V 122 (567)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~l---------A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~------~ 122 (567)
+++||+|..+....=..+..-. .-...-.+..++++ ...-+++..+++..+|+.|+++.+. +
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 4677877776654322211111 11122234445663 3456899999999999999998763 3
Q ss_pred HHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCC--CCCce
Q 038104 123 QLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTT--SAPKG 200 (567)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtT--G~pK~ 200 (567)
+.++++.. ....++..|-. .+.-++..+.- ..|.+ . . | ++.+|+.-| |...|
T Consensus 187 ~~~reIad---------~vga~l~~D~s-----------H~~GLIa~g~~-~~P~~-~-A-D--vvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 187 KRFREIAD---------EVGAYLMADIS-----------HIAGLIAGGLF-PNPFP-Y-A-D--VVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH---------HTT-EEEEE-T-----------TTHHHHHTTSS---GCC-T-S-S--EEEEESSGGG-SSS-E
T ss_pred HHHHHHHH---------hcCcEEEeccc-----------ccccceehhee-cCccc-c-c-e--EEEeeccccccccCce
Confidence 55555554 33455555542 33444444321 11211 1 1 2 344444444 66778
Q ss_pred EEech
Q 038104 201 VVYSH 205 (567)
Q Consensus 201 v~~~~ 205 (567)
++++.
T Consensus 241 iI~~~ 245 (399)
T PF00464_consen 241 IILTN 245 (399)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 88888
No 190
>PLN02654 acetate-CoA ligase
Probab=47.32 E-value=1.7e+02 Score=31.97 Aligned_cols=79 Identities=10% Similarity=-0.008 Sum_probs=60.1
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CCCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RNTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...+|..-.. ...++.++..|+..+.+ +.+.++++...++..++..++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 56899998776666544 45899999999999874432 23456677788887766 467889999999999999999
Q ss_pred cchH
Q 038104 277 CAPI 280 (567)
Q Consensus 277 ~~p~ 280 (567)
+...
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7654
No 191
>PRK07788 acyl-CoA synthetase; Validated
Probab=47.14 E-value=1.3e+02 Score=31.81 Aligned_cols=87 Identities=10% Similarity=-0.024 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHH-HHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAM-YEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|...+...+.. .....+++++|++....|-.-.+ +..+++++..|+.++.. ...+++.+...+++.++..+.
T Consensus 225 v~~s~~~~~~~~~~---~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 300 (549)
T PRK07788 225 APRPEPSPLAPLAG---LLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALV 300 (549)
T ss_pred EeccCccHHHHHHH---HHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEE
Confidence 35677666554333 33455788999887776653222 23456677889887765 567888999999999999999
Q ss_pred EcccchHHHHHH
Q 038104 117 VDCQYVQLAREA 128 (567)
Q Consensus 117 ~~~~~~~~~~~~ 128 (567)
..+..+..+.+.
T Consensus 301 ~~P~~~~~l~~~ 312 (549)
T PRK07788 301 VVPVMLSRILDL 312 (549)
T ss_pred EHHHHHHHHHhC
Confidence 988877665543
No 192
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=47.11 E-value=1.7e+02 Score=31.89 Aligned_cols=78 Identities=10% Similarity=-0.055 Sum_probs=58.8
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...+|..-.. ...++.+...|+..+.+. .+.++++...+++.++..++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 46888888776665544 45899999999999875433 334567777787776664 57888999999999999998
Q ss_pred cch
Q 038104 277 CAP 279 (567)
Q Consensus 277 ~~p 279 (567)
+..
T Consensus 192 ~~~ 194 (652)
T TIGR01217 192 TVD 194 (652)
T ss_pred Ecc
Confidence 754
No 193
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=47.09 E-value=2.2e+02 Score=29.98 Aligned_cols=84 Identities=11% Similarity=0.027 Sum_probs=60.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+.... ...+++++|++....|-.- .++..+++.+..|+..+.. +..+.+.+...+++.++..+
T Consensus 215 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~vt~~ 290 (547)
T PRK13295 215 VMHTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ-DIWDPARAAELIRTEGVTFT 290 (547)
T ss_pred EEeccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-CCCCHHHHHHHHHHcCCcEE
Confidence 4678887766555433 3457889998888777642 3455677888899987765 45678999999999999998
Q ss_pred EEcccchHHH
Q 038104 116 FVDCQYVQLA 125 (567)
Q Consensus 116 i~~~~~~~~~ 125 (567)
+..+.....+
T Consensus 291 ~~~p~~~~~l 300 (547)
T PRK13295 291 MASTPFLTDL 300 (547)
T ss_pred EecHHHHHHH
Confidence 8876655443
No 194
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=44.78 E-value=2.7e+02 Score=26.55 Aligned_cols=90 Identities=6% Similarity=-0.088 Sum_probs=57.7
Q ss_pred CceEEEeCCee--eeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 29 NRTSIIYEGAR--FNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 29 ~~~a~~~~~~~--~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
-++++-.++.+ -|++.-. +..+-..+.+.|. ++|++|+. ...+=.-..+.++|.+.|..++.+-|...+.....
T Consensus 17 ~~i~~K~E~~~ptgS~K~R~--a~~~l~~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 93 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKDRI--ALYMIEDAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRK 93 (291)
T ss_pred CeEEEEecccCCCCcchHHH--HHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 35666665533 3333221 2222223344453 45666554 55566666777788899998888888766677778
Q ss_pred HHHhcCceEEEEcccc
Q 038104 106 ILRHSEAKVFFVDCQY 121 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~~ 121 (567)
.++..++++++++...
T Consensus 94 ~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 94 LLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCEEEEeCCCC
Confidence 9999999999998764
No 195
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.78 E-value=2.3e+02 Score=29.92 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=72.2
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.+|++.. +..+|++.+...+..+...+... +++.|++...+|- ..-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 3677777651 25689999998877777766532 6788887777775 3456667788889999888777
Q ss_pred C-CCChHHHHHHHHhcCceEEEEcccchHHH
Q 038104 96 V-RLDAKNVASILRHSEAKVFFVDCQYVQLA 125 (567)
Q Consensus 96 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (567)
+ .++++.+...+...++..+..-+.....+
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~l 278 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLREL 278 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHH
Confidence 6 68898999999999877777766655543
No 196
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=44.48 E-value=2e+02 Score=30.77 Aligned_cols=83 Identities=14% Similarity=0.086 Sum_probs=59.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|...+...+..+... .+++++|++...+|-.- -+...+++.+..|+..+ +.+..+...+...+...++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v-~~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLA-LRRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEE-EcCCCCHHHHHHHHHHhcceEE
Confidence 468999888777766554 46889999888887643 33344556666776665 4567788888899999999998
Q ss_pred EEcccchHH
Q 038104 116 FVDCQYVQL 124 (567)
Q Consensus 116 i~~~~~~~~ 124 (567)
...+.....
T Consensus 293 ~~~p~l~~~ 301 (600)
T PRK08279 293 QYIGELCRY 301 (600)
T ss_pred eehHHHHHH
Confidence 876654443
No 197
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=44.34 E-value=2.2e+02 Score=26.67 Aligned_cols=78 Identities=9% Similarity=0.076 Sum_probs=47.9
Q ss_pred eHHHHHHH-HHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhhc------c--ceeeeccCCC---ChHHHHHHH
Q 038104 41 NWLQTYDR-CRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPMA------E--AVLNTINVRL---DAKNVASIL 107 (567)
Q Consensus 41 Ty~el~~~-v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l 107 (567)
++..+.+. ..++.+.+.+. -+.+||+|+|.+.-+.|..+++..+... | ..++-++... +.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 34444442 34555556664 3588999999999999999887766442 2 3455555543 334445555
Q ss_pred HhcCceEEEEc
Q 038104 108 RHSEAKVFFVD 118 (567)
Q Consensus 108 ~~~~~~~ii~~ 118 (567)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 66666655544
No 198
>PRK07470 acyl-CoA synthetase; Validated
Probab=43.57 E-value=2.5e+02 Score=29.34 Aligned_cols=88 Identities=13% Similarity=0.031 Sum_probs=57.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeecc-CCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTIN-VRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|...+...+......+. .++.++|++...+|-+-.+-...+..+..|+..+.++ ...+++.+...++..++.++.
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 46888877544332211111 2567889888888865443333333445566655444 357889999999999999999
Q ss_pred EcccchHHHH
Q 038104 117 VDCQYVQLAR 126 (567)
Q Consensus 117 ~~~~~~~~~~ 126 (567)
..+..+..+.
T Consensus 260 ~~P~~~~~l~ 269 (528)
T PRK07470 260 TVPTILKMLV 269 (528)
T ss_pred chHHHHHHHH
Confidence 9888776543
No 199
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=43.52 E-value=2.1e+02 Score=33.68 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=69.1
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.+|.++++.. +..+|...+...+..+... .+++++|++...+|-. ..+....++.+..|+..+..+
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 3566766652 1468888887776655433 4678899877766642 333444667778898888777
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHHHH
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQLAR 126 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (567)
...+.+.+.+.+++.++.++.+.+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6678899999999999999999887665443
No 200
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=43.32 E-value=2.3e+02 Score=29.72 Aligned_cols=96 Identities=9% Similarity=-0.036 Sum_probs=66.1
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHH--H-HHHHhhhccceeeec
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMY--E-MHFAVPMAEAVLNTI 94 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~--~-~~lA~~~~G~~~v~l 94 (567)
.++.+|++.. +..+|...+...+..... ..++.++|++...+|..-.+- . ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 3556666542 246888888766554333 457888998888777543322 2 357778889887654
Q ss_pred cCCCChHHHHHHHHhcCceEEEEcccchHHHH
Q 038104 95 NVRLDAKNVASILRHSEAKVFFVDCQYVQLAR 126 (567)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (567)
+...+..+...+++.++.++...+.....+.
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4567788889999999999999887665443
No 201
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=43.05 E-value=1.5e+02 Score=31.12 Aligned_cols=94 Identities=9% Similarity=-0.084 Sum_probs=63.1
Q ss_pred EEEEeccCCCCCCceEEechHHHHHHhhHhhhh----ccCCCCCEEEEecchHhhhhHHHHHHHHhhCcee-eeeCCCCH
Q 038104 186 ITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILG----WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTN-VCLRNTTA 260 (567)
Q Consensus 186 a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~-~~~~~~~~ 260 (567)
..++|-+-.++. -.+|.+.+...+...... .+. ++|++...+|..-..- ..++.+.-.|+.. ++.+.+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~-~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV-IALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH-HHHHHHHHcCCEEeecccCCCH
Confidence 345554443333 577888887666554433 346 9999999999865432 2345555556554 44467899
Q ss_pred HHHHHHHHhcCcceeecchHHHHH
Q 038104 261 YDMYRNISQHRVTHMCCAPIVFNI 284 (567)
Q Consensus 261 ~~~~~~i~~~~~t~l~~~p~~~~~ 284 (567)
+.+...|.+.++.++++....++.
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHccCCCEEEEecccccc
Confidence 999999999999999877655543
No 202
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=42.87 E-value=2.1e+02 Score=30.83 Aligned_cols=96 Identities=8% Similarity=-0.079 Sum_probs=66.2
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR- 256 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~- 256 (567)
.++.+|++.... .+| ....+|.+.+...+..... ..+++++|++...+|..... ...++.++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 345666654321 122 2456888888766655443 45889999999998865433 334567777888877664
Q ss_pred CCCHHHHHHHHHhcCcceeecchH
Q 038104 257 NTTAYDMYRNISQHRVTHMCCAPI 280 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~l~~~p~ 280 (567)
.+.++.+...++..+++.+++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578889999999999999988654
No 203
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=42.39 E-value=3.7e+02 Score=27.05 Aligned_cols=21 Identities=19% Similarity=0.034 Sum_probs=12.0
Q ss_pred CCCCCCceEEech-HHHHHHhh
Q 038104 193 GTTSAPKGVVYSH-RGAYLSTL 213 (567)
Q Consensus 193 GtTG~pK~v~~~~-~~l~~~~~ 213 (567)
+=||---|..... +.++....
T Consensus 239 ~mtGwRvG~~v~~~~~l~~~~~ 260 (393)
T COG0436 239 GMTGWRIGWVVGPPEELIAALR 260 (393)
T ss_pred cccccceeEeecChHHHHHHHH
Confidence 3466667776666 44444443
No 204
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=41.90 E-value=1.7e+02 Score=30.94 Aligned_cols=85 Identities=7% Similarity=-0.081 Sum_probs=63.9
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+..... ..++.+++++....+-.... +..++.++..|...+.++ ....+++...+++.+++.+++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 5788887666655544 34788999999888765443 345677788888888775 467889999999999999999
Q ss_pred chHHHHHHHh
Q 038104 278 APIVFNILLQ 287 (567)
Q Consensus 278 ~p~~~~~l~~ 287 (567)
.......+..
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 205
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=41.85 E-value=2.3e+02 Score=28.71 Aligned_cols=58 Identities=14% Similarity=0.005 Sum_probs=49.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHhhhccceeeec--cCCCChHHHHHHHHhcCceEEEEccc
Q 038104 63 KHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTI--NVRLDAKNVASILRHSEAKVFFVDCQ 120 (567)
Q Consensus 63 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (567)
+|-+|+..++=.++....+..+...|+-+... ||....++....|...+..++-....
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~ 90 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGE 90 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCC
Confidence 58899999999999999999999999987766 78778899999999988887655433
No 206
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.80 E-value=2.6e+02 Score=29.72 Aligned_cols=87 Identities=15% Similarity=0.085 Sum_probs=60.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHH-HHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAM-YEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (567)
..+|+..+...+..+. .....++.++|++...+|-.-.+ ....++.+..|+..+...+..+++.+...++..++.++.
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 4678887754433321 11234788899888877764332 234467777888887766677899999999999999999
Q ss_pred EcccchHHH
Q 038104 117 VDCQYVQLA 125 (567)
Q Consensus 117 ~~~~~~~~~ 125 (567)
..+..+..+
T Consensus 278 ~~P~~~~~l 286 (576)
T PRK05620 278 GVPTLWIQL 286 (576)
T ss_pred ecCHHHHHH
Confidence 877765543
No 207
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=41.72 E-value=3e+02 Score=28.91 Aligned_cols=86 Identities=12% Similarity=-0.006 Sum_probs=62.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHH---HHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAM---YEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKV 114 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~---~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (567)
..+|...+...+...... .+++++|++...+|-.-.+ ....++++..|+..+.. +..+...+...+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 468999988877765443 4688999888877754322 22467888899887754 4556777888999999999
Q ss_pred EEEcccchHHHHH
Q 038104 115 FFVDCQYVQLARE 127 (567)
Q Consensus 115 ii~~~~~~~~~~~ 127 (567)
+...+.....+..
T Consensus 276 ~~~~p~~~~~l~~ 288 (536)
T PRK10946 276 TALVPPAVSLWLQ 288 (536)
T ss_pred EEeChHHHHHHHh
Confidence 9998876665544
No 208
>PRK05850 acyl-CoA synthetase; Validated
Probab=41.72 E-value=3e+02 Score=29.30 Aligned_cols=84 Identities=11% Similarity=-0.039 Sum_probs=60.6
Q ss_pred EEechHHHHHHhhHhhhh---ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC----CCHHHHHHHHHhcCcc
Q 038104 201 VVYSHRGAYLSTLSLILG---WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN----TTAYDMYRNISQHRVT 273 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t 273 (567)
..+|++.+...+...... .+ .++|++...++.... -+...+.++..|+..+.++. ...+++...++..++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~-~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLE-YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCccc-HHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 468888887666554443 34 578999988886432 23346777788888888763 3567899999999999
Q ss_pred eeecchHHHHHHH
Q 038104 274 HMCCAPIVFNILL 286 (567)
Q Consensus 274 ~l~~~p~~~~~l~ 286 (567)
.+++.+.....+.
T Consensus 112 ~il~~~~~~~~~~ 124 (578)
T PRK05850 112 VVLTTSAVVDDVT 124 (578)
T ss_pred EEEEcHHHHHHHH
Confidence 9999887766653
No 209
>PRK13388 acyl-CoA synthetase; Provisional
Probab=41.55 E-value=3.4e+02 Score=28.61 Aligned_cols=92 Identities=12% Similarity=0.046 Sum_probs=61.1
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHH--HHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPA--MYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.+|++.. +..+|+..+...+..+... .+++++|++...+|-.-. ++..+++.+..|+..+. .
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTER---FGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHH---hCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 3466776652 1468888877655554433 478899988877765322 23334456677877654 4
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccch
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYV 122 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (567)
+..+...+...+++.++.++...+...
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l 250 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPL 250 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHH
Confidence 567788999999999999887655433
No 210
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=41.52 E-value=3.8e+02 Score=26.89 Aligned_cols=108 Identities=7% Similarity=-0.017 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHHHHcCCceEEEe-C--------CeeeeHHHHHHHHHHHHHHHHhCCCC--CCCEEEEEcCChH--HHHH
Q 038104 13 PLSPLTFLKRAAAVYGNRTSIIY-E--------GARFNWLQTYDRCRRLASSLRSLNMP--KHSVVSVLAPNIP--AMYE 79 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~-~--------~~~~Ty~el~~~v~~la~~L~~~g~~--~gd~V~i~~~~~~--~~~~ 79 (567)
..++.++++-.+..+-+..+++. . +..+|++.+...+..++..+ +++ +.|++...+|-.- -+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 34566666655555544455544 2 25789999998888777765 443 3456766666542 3344
Q ss_pred HHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHH
Q 038104 80 MHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAR 126 (567)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (567)
.++..+..|+.++... ..++..+...++.. .++++.+..+..+.
T Consensus 156 ~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~ 199 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLA 199 (386)
T ss_pred HHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHH
Confidence 5566677898887664 45555555554432 56666666655543
No 211
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=41.16 E-value=66 Score=25.53 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..+...+.+.|+.+++.|.+++..+.....+...+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45667778889999999999999988777777777888864
No 212
>PRK05852 acyl-CoA synthetase; Validated
Probab=41.00 E-value=3.9e+02 Score=28.03 Aligned_cols=87 Identities=9% Similarity=0.062 Sum_probs=62.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeec-cCCCChHHHHHHHHhcCceE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTI-NVRLDAKNVASILRHSEAKV 114 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ 114 (567)
..+|+..+...+..+...+ +++++|++....|-. ..++..+++++..|...+.- ....++..+...++..++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4688888877666665444 678899887777653 34556677777777765532 23467788899999999999
Q ss_pred EEEcccchHHHHH
Q 038104 115 FFVDCQYVQLARE 127 (567)
Q Consensus 115 ii~~~~~~~~~~~ 127 (567)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9988887665544
No 213
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=40.96 E-value=49 Score=31.51 Aligned_cols=53 Identities=6% Similarity=0.001 Sum_probs=43.3
Q ss_pred eeeHHHHHHH-----HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 39 RFNWLQTYDR-----CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 39 ~~Ty~el~~~-----v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
.+.|.++.+. ...+...|.+.|+.+++.|.++|.++.....+++++-.+|..-
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~ 258 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPN 258 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 4777777632 4567777788899999999999999999999999998899763
No 214
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=40.05 E-value=1e+02 Score=30.75 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=35.8
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEE
Q 038104 58 SLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 58 ~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 117 (567)
..++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 65 ~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 65 LLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 3467889988775554 334445666778887777542 456777776654 5666654
No 215
>PRK07787 acyl-CoA synthetase; Validated
Probab=40.01 E-value=2.7e+02 Score=28.58 Aligned_cols=84 Identities=10% Similarity=-0.024 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+..++.. .+++++|++...+|- ...++..+++.+..|+.++..+ ..+++.+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 468888887766555543 467888977665553 2345566788899999988664 467889999999 899988
Q ss_pred EEcccchHHHH
Q 038104 116 FVDCQYVQLAR 126 (567)
Q Consensus 116 i~~~~~~~~~~ 126 (567)
.+.+..+..+.
T Consensus 221 ~~~P~~~~~l~ 231 (471)
T PRK07787 221 FGVPTVWSRIA 231 (471)
T ss_pred EcchHHHHHHH
Confidence 88777655444
No 216
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=39.95 E-value=2.6e+02 Score=30.38 Aligned_cols=94 Identities=10% Similarity=-0.043 Sum_probs=65.0
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-C
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-N 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~ 257 (567)
++.+|++.... .| ....+|.+.+...+..... ..+++++|++...+|..... ...++.++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeCCC
Confidence 35566544322 22 1356888888766655443 45789999999999864332 344667777888877664 5
Q ss_pred CCHHHHHHHHHhcCcceeecchH
Q 038104 258 TTAYDMYRNISQHRVTHMCCAPI 280 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p~ 280 (567)
+.++.+...++..++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 78889999999999999988653
No 217
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=39.85 E-value=35 Score=24.41 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=14.3
Q ss_pred HHHHHHhCCCCCCCEEEEE
Q 038104 52 LASSLRSLNMPKHSVVSVL 70 (567)
Q Consensus 52 la~~L~~~g~~~gd~V~i~ 70 (567)
+-..|.+.|+++||+|.|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4445566799999999874
No 218
>PLN03013 cysteine synthase
Probab=39.69 E-value=2.1e+02 Score=29.09 Aligned_cols=80 Identities=9% Similarity=-0.057 Sum_probs=54.3
Q ss_pred eeeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEE
Q 038104 39 RFNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (567)
+-|+++ +-+..+-..+.+.| +++|....|-...+=.-+...++|...|..++.+-|...+.+....++..+++++++
T Consensus 150 tGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 150 CCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred ccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 455555 22333333334455 578854445555555566666778889998888888777888899999999999999
Q ss_pred ccc
Q 038104 118 DCQ 120 (567)
Q Consensus 118 ~~~ 120 (567)
+..
T Consensus 228 ~~~ 230 (429)
T PLN03013 228 DPA 230 (429)
T ss_pred CCC
Confidence 754
No 219
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=39.62 E-value=2.7e+02 Score=26.65 Aligned_cols=90 Identities=6% Similarity=-0.071 Sum_probs=57.0
Q ss_pred CceEEEeCCee--eeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 29 NRTSIIYEGAR--FNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 29 ~~~a~~~~~~~--~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
-++.+-.++.. -|+++ +.+..+.....+.| +.+|++|.- ...+=.-..+.+++.+.|..+..+-|...+.....
T Consensus 21 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKD--RIALNMIWDAEKRGLLKPGKTIVE-PTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred ceEEEEEcccCCCCcchH--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 35666665533 33333 22233333444556 477787643 33344455555677789998888888766566688
Q ss_pred HHHhcCceEEEEcccc
Q 038104 106 ILRHSEAKVFFVDCQY 121 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~~ 121 (567)
.++..++++++++...
T Consensus 98 ~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 98 LLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCEEEEECCCC
Confidence 8999999999998653
No 220
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.46 E-value=1.9e+02 Score=29.94 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=60.6
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+..... ..+++++|++....+-... .+..++.++..|+..+.++ ......+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 4777777665555443 4478899999988876433 3345677788888888775 457788899999999999988
Q ss_pred chHHHHHH
Q 038104 278 APIVFNIL 285 (567)
Q Consensus 278 ~p~~~~~l 285 (567)
.......+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87666554
No 221
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=39.23 E-value=98 Score=22.47 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHHcCC-------ceEEEeCCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC
Q 038104 13 PLSPLTFLKRAAAVYGN-------RTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN 73 (567)
Q Consensus 13 ~~tl~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~ 73 (567)
..|+.+++++...++|+ ..++...++.++ .+.-++.||.|+|+-|-
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCCC
Confidence 67999999999988875 344444455544 22347899999998763
No 222
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=38.69 E-value=30 Score=24.71 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=12.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEE
Q 038104 49 CRRLASSLRSLNMPKHSVVSV 69 (567)
Q Consensus 49 v~~la~~L~~~g~~~gd~V~i 69 (567)
...+-..|.++|+++||+|-|
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 42 KMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HTTHHHHHHTTT--TT-EEEE
T ss_pred HCCHHHHHHHcCCCCCCEEEE
Confidence 344556677789999999876
No 223
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=38.66 E-value=2.6e+02 Score=26.81 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=48.7
Q ss_pred HHHHHHH----hCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcc
Q 038104 51 RLASSLR----SLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 51 ~la~~L~----~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (567)
|+|.++. +.| +++|++|.= ...+=--+...+.|...|..++.+-|..-+.+-..+|+.+++.+++++.
T Consensus 44 R~A~~mI~~Ae~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 44 RIALYMIEDAEKRGLLKPGGTIVE-ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEE-cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4444443 345 899994433 3333345555566678899999888877777789999999999999987
No 224
>PLN02550 threonine dehydratase
Probab=38.56 E-value=5.3e+02 Score=27.67 Aligned_cols=104 Identities=14% Similarity=0.074 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHcCCceEEEeCCeee--eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 16 PLTFLKRAAAVYGNRTSIIYEGARF--NWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~~~~--Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
......+..+....++++-.++.+- ||+. .-..+++.. |.+...++| .|+--..| ......++|.++|..+..
T Consensus 111 PL~~s~~LS~~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-VV~aSaGN--hAqgvA~aA~~lGika~I 185 (591)
T PLN02550 111 PLQLAKKLSERLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-VICSSAGN--HAQGVALSAQRLGCDAVI 185 (591)
T ss_pred hhhhhHHhhHhhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-EEEECCCH--HHHHHHHHHHHcCCCEEE
Confidence 3333344444555577777766433 4554 222233332 322234556 45544444 455556788899998888
Q ss_pred ccCCCChHHHHHHHHhcCceEEEEcccchHH
Q 038104 94 INVRLDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
+-|...+..-...++..+++++++...+.+.
T Consensus 186 vmP~~tp~~Kv~~~r~~GAeVvl~g~~~dea 216 (591)
T PLN02550 186 AMPVTTPEIKWQSVERLGATVVLVGDSYDEA 216 (591)
T ss_pred EECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 8887766666788899999999998754443
No 225
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=38.50 E-value=2.4e+02 Score=27.05 Aligned_cols=89 Identities=9% Similarity=-0.013 Sum_probs=57.7
Q ss_pred CceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 29 NRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 29 ~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
-++.+-.++ .+-||+. +.+..+...+.+.| +.+|++|+ -...+=.-..+.++|...|..+..+-|...+..-..
T Consensus 22 ~~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 356666554 3445554 23333333444455 37788664 444445555666677789998888888766666778
Q ss_pred HHHhcCceEEEEccc
Q 038104 106 ILRHSEAKVFFVDCQ 120 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (567)
.++..++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999999765
No 226
>PLN02614 long-chain acyl-CoA synthetase
Probab=38.18 E-value=4.3e+02 Score=28.89 Aligned_cols=85 Identities=14% Similarity=-0.126 Sum_probs=62.3
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...++-.... +...++++..|+..+.+. ...++++...++..+++.++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 35688888766655443 45889999999988865432 224567777888877765 56888999999999999999
Q ss_pred cchHHHHHHH
Q 038104 277 CAPIVFNILL 286 (567)
Q Consensus 277 ~~p~~~~~l~ 286 (567)
+....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 9877665553
No 227
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=38.17 E-value=3.2e+02 Score=26.88 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHcCCceEEEeCC--eeeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 15 SPLTFLKRAAAVYGNRTSIIYEG--ARFNWLQTYDRCRRLASSLRSL-NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~-g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
|.........++...++++-.++ ..=+|+= .-.-+++.. |... ..++| .|+--..|..+-+ .|||-++|...
T Consensus 26 TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK~-RGA~n~i~~-Ls~e~~~~~g-ViaaSaGNHaQGv--A~aa~~lGi~a 100 (347)
T COG1171 26 TPLQRSPSLSERLGAEIYLKRENLQPVGSFKI-RGAYNKLSS-LSEEEERAAG-VIAASAGNHAQGV--AYAAKRLGIKA 100 (347)
T ss_pred CCcccchhhHHhhCceEEEeeccCcccccchh-hhHHHHHHh-cChhhhhcCc-eEEecCCcHHHHH--HHHHHHhCCCE
Confidence 33333444455566777777766 2333332 223333444 4422 22333 5777778876655 48999999999
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhh
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALK 130 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 130 (567)
+.+-|..++..-..-.+.+++.+++.+..+.+....+.+
T Consensus 101 ~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~~ 139 (347)
T COG1171 101 TIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAEE 139 (347)
T ss_pred EEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHHH
Confidence 999999999888899999999999999887665555443
No 228
>PRK05857 acyl-CoA synthetase; Validated
Probab=37.99 E-value=2.3e+02 Score=29.89 Aligned_cols=80 Identities=13% Similarity=-0.068 Sum_probs=59.0
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..++.+++++...++..... +..++.++..|+..+.++ ..+.+++...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 35788888766655554 34788999999888764433 334677778888888775 46778888999999999988
Q ss_pred cchHH
Q 038104 277 CAPIV 281 (567)
Q Consensus 277 ~~p~~ 281 (567)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87654
No 229
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=37.42 E-value=1.5e+02 Score=31.05 Aligned_cols=77 Identities=16% Similarity=0.010 Sum_probs=59.0
Q ss_pred eeeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCC--hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 39 RFNWLQTYDRCRRLAS-SLRSLNMPKHSVVSVLAPN--IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 39 ~~Ty~el~~~v~~la~-~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
.+|+.... +.|. ...-.|+++.|+|-+-+|= +...++-+-+|+..|+++| |....|+..+=.-..+.++.++
T Consensus 261 vith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 46665544 4444 3344589999999888874 7788888899999999977 7889999998888889998876
Q ss_pred EEccc
Q 038104 116 FVDCQ 120 (567)
Q Consensus 116 i~~~~ 120 (567)
-.-.+
T Consensus 336 QYIGE 340 (649)
T KOG1179|consen 336 QYIGE 340 (649)
T ss_pred ehHHH
Confidence 55433
No 230
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=37.28 E-value=3.1e+02 Score=30.49 Aligned_cols=101 Identities=9% Similarity=0.015 Sum_probs=70.2
Q ss_pred EEechHHHHHHhhHhhhh------ccCCCC-----------CEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHH
Q 038104 201 VVYSHRGAYLSTLSLILG------WEMGSA-----------PVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYD 262 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~------~~~~~~-----------d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~ 262 (567)
..+|.+.+...+...... .|++++ |++....+-.... +...++++..|+..+.+. ...+++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~lA~~~~Gav~Vpl~~~~~~~e 168 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVADLACMLSGVTTLVMHSKFSIDV 168 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHH
Confidence 357888876666554332 367777 8888887754322 234567777888877774 678999
Q ss_pred HHHHHHhcCcceeecchHHHHHHHhcCCcccccCCCceEEEEcC
Q 038104 263 MYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGG 306 (567)
Q Consensus 263 ~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~~~~~g 306 (567)
+...++.-++.++++.+..+..+.... ..++.++.+++-+
T Consensus 169 l~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 169 IVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 999999999999999888887776543 2345676666543
No 231
>PLN00011 cysteine synthase
Probab=37.24 E-value=2.6e+02 Score=27.24 Aligned_cols=88 Identities=11% Similarity=-0.061 Sum_probs=56.8
Q ss_pred ceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCC-CCCC-CEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 30 RTSIIYEGA--RFNWLQTYDRCRRLASSLRSLN-MPKH-SVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 30 ~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g-~~~g-d~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
++++-.++. +=|+++ +.+..+-....+.| +.+| ++|.. ...+=.-..+.++|..+|..+..+-|...+.....
T Consensus 33 ~i~~K~E~~nPtGS~K~--R~a~~~l~~a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 109 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKD--RIAYSMIKDAEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRI 109 (323)
T ss_pred eEEEEecccCCccccch--HHHHHHHHHHHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHH
Confidence 455555443 233332 22333333344444 6777 55544 45555566666788889998888888766678888
Q ss_pred HHHhcCceEEEEccc
Q 038104 106 ILRHSEAKVFFVDCQ 120 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (567)
.++..++++++++..
T Consensus 110 ~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 110 ILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCEEEEECCC
Confidence 999999999999864
No 232
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=37.22 E-value=2.4e+02 Score=29.80 Aligned_cols=84 Identities=10% Similarity=0.054 Sum_probs=60.3
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|++.+...+..... ..++.+++++...++-...+ +...+.++..|+..+.++ .....++...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 35788888766655544 44788999999888765433 234677778888877665 45678899999999999998
Q ss_pred cchHHHHHH
Q 038104 277 CAPIVFNIL 285 (567)
Q Consensus 277 ~~p~~~~~l 285 (567)
.....+..+
T Consensus 133 ~~~~~~~~~ 141 (546)
T PLN02330 133 TNDTNYGKV 141 (546)
T ss_pred EccchhhhH
Confidence 876655443
No 233
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=36.82 E-value=4.5e+02 Score=26.40 Aligned_cols=168 Identities=14% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC------------CChHHHHHHHHhcCceEEEE
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR------------LDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~ii~ 117 (567)
+.+...|+.. +.+||.|+|.-|- |-.-+-.+..+|++++.+... .+.+++..-+..--=-++++
T Consensus 104 ~ai~~~~~~l-~~~GDeVii~eP~---fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~n 179 (420)
T KOG0257|consen 104 EAISSALLGL-LNPGDEVIVFEPF---FDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILN 179 (420)
T ss_pred HHHHHHHHHH-cCCCCEEEEecCc---chhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEe
Q ss_pred ccc-------chHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEe
Q 038104 118 DCQ-------YVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNY 190 (567)
Q Consensus 118 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 190 (567)
++. ..+.+.++.+.+. ....++..|+ .|+-+...+.........+..-+..+-+.
T Consensus 180 tPhNPtGkvfsReeLe~ia~l~~------k~~~lvisDe------------vYe~~v~d~~~h~r~aslPgm~ertitvg 241 (420)
T KOG0257|consen 180 TPHNPTGKVFSREELERIAELCK------KHGLLVISDE------------VYEWLVYDGNKHIRIASLPGMYERTITVG 241 (420)
T ss_pred CCCCCcCcccCHHHHHHHHHHHH------HCCEEEEEhh------------HhHHHhhCCCcceeeecCCchhheEEEec
Q ss_pred ccCCCCCCceEEechHHHHHHhhHhhhhccCCCCCEEEEecchHhhhhHHH
Q 038104 191 TSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTF 241 (567)
Q Consensus 191 TSGtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 241 (567)
+-|-|=.-.|+.+.+.-. -..............++.+..|+.......+
T Consensus 242 S~gKtf~~TGWrlGW~ig--p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~ 290 (420)
T KOG0257|consen 242 SFGKTFGVTGWRLGWAIG--PKHLYSALFPVHQNFVFTCPTPIQEASAAAF 290 (420)
T ss_pred cccceeeeeeeeeeeeec--hHHhhhhHHHHhhccccccCcHHHHHHHHHH
No 234
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=36.52 E-value=2.9e+02 Score=29.89 Aligned_cols=95 Identities=8% Similarity=-0.081 Sum_probs=65.7
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-C
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-N 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~ 257 (567)
++.+|++.... . ......+|.+.+...+..... ..+++++|++...+|-.-.. +..++.++..|+..+.+. .
T Consensus 81 p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~~ 156 (637)
T PRK00174 81 GDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFGG 156 (637)
T ss_pred CCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCC
Confidence 45666553221 1 113457899998776665544 45789999999988864433 334667777888877764 5
Q ss_pred CCHHHHHHHHHhcCcceeecchH
Q 038104 258 TTAYDMYRNISQHRVTHMCCAPI 280 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p~ 280 (567)
..++++...++..+++.+++...
T Consensus 157 ~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 157 FSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCHHHHHHHHHhcCCcEEEEcCc
Confidence 68889999999999999987543
No 235
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=36.45 E-value=3e+02 Score=29.77 Aligned_cols=94 Identities=12% Similarity=0.013 Sum_probs=64.4
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CC
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RN 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 257 (567)
++.+|++ +-+..+|. .-.+|.+.+...+..... ..+++++|++...+|..-.. ...++.++..|+..+.+ +.
T Consensus 66 p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~-v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 66 GEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA-VFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecCCC
Confidence 3455554 33222232 245788888766655443 45899999999999875332 33466777788887666 45
Q ss_pred CCHHHHHHHHHhcCcceeecch
Q 038104 258 TTAYDMYRNISQHRVTHMCCAP 279 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p 279 (567)
+...++...++..+++.+++..
T Consensus 142 ~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 142 FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCHHHHHHHHHhcCceEEEECC
Confidence 7888999999999999988754
No 236
>PRK07798 acyl-CoA synthetase; Validated
Probab=36.31 E-value=3.7e+02 Score=28.03 Aligned_cols=85 Identities=5% Similarity=-0.163 Sum_probs=59.5
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
-.+|.+.+...+..... ..++.++|++....+-.... +...+..+..|+..+.++ ....+++...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 35788887665555443 45788899988887643221 234566777788877765 45778899999999999999
Q ss_pred cchHHHHHHH
Q 038104 277 CAPIVFNILL 286 (567)
Q Consensus 277 ~~p~~~~~l~ 286 (567)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655543
No 237
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=35.39 E-value=1.4e+02 Score=29.81 Aligned_cols=62 Identities=10% Similarity=0.101 Sum_probs=38.9
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEE
Q 038104 51 RLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFF 116 (567)
Q Consensus 51 ~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 116 (567)
.+...|...++++||.|.+-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445555678899987765544 333345566788888877542 356777776653 456665
No 238
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=35.36 E-value=89 Score=24.13 Aligned_cols=53 Identities=4% Similarity=-0.213 Sum_probs=39.4
Q ss_pred eeeeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 38 ARFNWLQTYDR----CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 38 ~~~Ty~el~~~----v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..+.+.++.+. ...+...+...++.+++.|.+++.++.....+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 35677776543 235667777778888899999999988777777778888864
No 239
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.21 E-value=3e+02 Score=29.20 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=59.8
Q ss_pred EechHHHHHHhhHhhhh----ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 202 VYSHRGAYLSTLSLILG----WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
.+|++.+...+...... .+++++|++...++..... ...++.++..|+..+.++ ....+++...++..++..++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii 127 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEE
Confidence 57888887766665543 3688999999988864332 334667778888887765 46778899999999999998
Q ss_pred cchHHHH
Q 038104 277 CAPIVFN 283 (567)
Q Consensus 277 ~~p~~~~ 283 (567)
.......
T Consensus 128 ~~~~~~~ 134 (562)
T PRK05677 128 CLANMAH 134 (562)
T ss_pred Eecchhh
Confidence 8665544
No 240
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=34.96 E-value=1.8e+02 Score=29.03 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccC-----CCChHHHHHHHHh---cCceEEEE
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINV-----RLDAKNVASILRH---SEAKVFFV 117 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~ 117 (567)
..+...+...++++||.|.+-.+. +....-++...|+.++.++. ..+.+.+...+.. -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 344444555578899987776654 34444566778888877654 2467888888863 35566664
No 241
>PRK10717 cysteine synthase A; Provisional
Probab=34.82 E-value=2.9e+02 Score=26.98 Aligned_cols=88 Identities=6% Similarity=-0.087 Sum_probs=55.8
Q ss_pred ceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 30 RTSIIYEGA--RFNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 30 ~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
++++-.++. +=|++. +.+..+...+.+.| +++|++|+- ...+-.-..+.++|.+.|..+..+-|...++.....
T Consensus 29 ~i~~K~E~~nptGS~K~--Rga~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 105 (330)
T PRK10717 29 EILGKAEFLNPGGSVKD--RAALNIIWDAEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDL 105 (330)
T ss_pred eEEEEeeccCCCCCchH--HHHHHHHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 566655443 333333 11222222333344 477776554 444555666667778899888888787667778899
Q ss_pred HHhcCceEEEEccc
Q 038104 107 LRHSEAKVFFVDCQ 120 (567)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (567)
++..++++++++..
T Consensus 106 ~~~~GA~V~~~~~~ 119 (330)
T PRK10717 106 LRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCEEEEeCCc
Confidence 99999999999753
No 242
>PRK07476 eutB threonine dehydratase; Provisional
Probab=34.69 E-value=3.5e+02 Score=26.32 Aligned_cols=92 Identities=14% Similarity=-0.013 Sum_probs=54.8
Q ss_pred HcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHH
Q 038104 26 VYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNV 103 (567)
Q Consensus 26 ~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (567)
..+-++++-.++. +=|+++ +.+..+-..+.+.|.++| |... ..+=.-..+.++|...|..++.+-|...+..-
T Consensus 31 ~~g~~l~~K~E~~nptGS~K~--R~a~~~i~~a~~~~~~~g--vv~a-SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k 105 (322)
T PRK07476 31 RAGVPVWLKLETLQPTGSFKL--RGATNALLSLSAQERARG--VVTA-STGNHGRALAYAARALGIRATICMSRLVPANK 105 (322)
T ss_pred hhCCeEEEEEccCCCCCCchH--HHHHHHHHhhhhhhhCCe--EEEE-CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHH
Confidence 3334666666553 233322 112222222334444443 3332 33444566667888999988887787766777
Q ss_pred HHHHHhcCceEEEEcccch
Q 038104 104 ASILRHSEAKVFFVDCQYV 122 (567)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~ 122 (567)
...++..++++++++....
T Consensus 106 ~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 106 VDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred HHHHHHcCCEEEEECCCHH
Confidence 8889999999999986543
No 243
>PRK10595 SOS cell division inhibitor; Provisional
Probab=34.68 E-value=1.6e+02 Score=25.30 Aligned_cols=37 Identities=11% Similarity=-0.024 Sum_probs=24.4
Q ss_pred HHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccc
Q 038104 53 ASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEA 89 (567)
Q Consensus 53 a~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 89 (567)
+.+|.+.|+..+..+.|...+..+.+.++-=|++.|.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 4566677777666555555666677777766666664
No 244
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=34.67 E-value=3.8e+02 Score=31.57 Aligned_cols=96 Identities=8% Similarity=0.074 Sum_probs=66.5
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.++++.. +..+|.+.+...+...+.. .+++++|++...+|-. ..+...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4556666542 1468988887766665543 3678899888877753 233355667778898887766
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHHH
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQLA 125 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (567)
.....+.+.+.+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555666788889999999998877665543
No 245
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=34.64 E-value=3.1e+02 Score=26.86 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=45.5
Q ss_pred HHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcc
Q 038104 55 SLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (567)
.|+..+++||+.|+|+.--+.-..+..+|- ..|+.++.++.+..- .....+.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Ak-a~ga~Via~~~~~~K---~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAK-AMGAEVIAITRSEEK---LELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHH-HcCCeEEEEeCChHH---HHHHHHhCCcEEEEcC
Confidence 345568999999999999999999999987 455887777655433 3444677788887754
No 246
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=34.61 E-value=5.4e+02 Score=27.64 Aligned_cols=84 Identities=10% Similarity=-0.085 Sum_probs=59.5
Q ss_pred EEechHHHHHHhhHhhhhc--cCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CC-CC--HHHHHHHHHhcCcce
Q 038104 201 VVYSHRGAYLSTLSLILGW--EMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RN-TT--AYDMYRNISQHRVTH 274 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~-~~--~~~~~~~i~~~~~t~ 274 (567)
..+|.+.+...+......+ .+.++|++...++-...+ +...+.++..|+..+.+ +. .. ++++...++..++..
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 145 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTV 145 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCE
Confidence 4678888876665544433 268999999988876432 33466777888887766 22 22 678899999999999
Q ss_pred eecchHHHHHH
Q 038104 275 MCCAPIVFNIL 285 (567)
Q Consensus 275 l~~~p~~~~~l 285 (567)
+++....+..+
T Consensus 146 li~~~~~~~~~ 156 (612)
T PRK12476 146 VLTTTAAAEAV 156 (612)
T ss_pred EEEcHHHHHHH
Confidence 99987766544
No 247
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=34.08 E-value=3.7e+02 Score=28.92 Aligned_cols=101 Identities=9% Similarity=0.031 Sum_probs=71.8
Q ss_pred HcCCceEEEe---------CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHH-HHhhhccceeeecc
Q 038104 26 VYGNRTSIIY---------EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMH-FAVPMAEAVLNTIN 95 (567)
Q Consensus 26 ~~p~~~a~~~---------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~-lA~~~~G~~~v~l~ 95 (567)
..||.+|.+. .|.-+||+-+...+..+...+. -++++|++.-++|-+--+=-++ .++...|.+.+ .
T Consensus 188 ~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~--~ 263 (613)
T COG1022 188 PKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV--L 263 (613)
T ss_pred CCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE--E
Confidence 4567776654 1257999999999988888876 3789999999998653222222 33333333333 3
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchHHHHHHhh
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQLAREALK 130 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 130 (567)
...+...+..-+...+|.+++.-+..++++.+.+.
T Consensus 264 ~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~ 298 (613)
T COG1022 264 FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIM 298 (613)
T ss_pred ecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHH
Confidence 45667889999999999999999888888776654
No 248
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=33.68 E-value=3.6e+02 Score=29.04 Aligned_cols=94 Identities=12% Similarity=0.035 Sum_probs=63.9
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CC
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RN 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 257 (567)
++.+|++ +.+..+|. .-.+|.+.+...+..... ..+++++|++...+|..-.. ...++.++..|+..+.+ +.
T Consensus 67 p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~~~ 142 (629)
T PRK10524 67 PEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVFGG 142 (629)
T ss_pred CCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCC
Confidence 4456654 33322222 346788888766555443 45899999999999864332 33466777788876666 45
Q ss_pred CCHHHHHHHHHhcCcceeecch
Q 038104 258 TTAYDMYRNISQHRVTHMCCAP 279 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p 279 (567)
+.++.+...++..++..+++..
T Consensus 143 ~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 143 FASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCHHHHHHHHHhcCCcEEEEcc
Confidence 7888999999999999998754
No 249
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=33.47 E-value=4.3e+02 Score=25.20 Aligned_cols=88 Identities=8% Similarity=0.012 Sum_probs=57.5
Q ss_pred CceEEEeCCee--eeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 29 NRTSIIYEGAR--FNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 29 ~~~a~~~~~~~--~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
.++++-.++.. =|+++ +.+..+.....+.| +++|+.|+- ...+-.-..+.++|...|..+..+-|...+..-..
T Consensus 23 ~~i~~K~E~~nptGS~K~--R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKD--RPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHH--HHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 35666665533 33332 22233333333445 477876655 44455566666778889999888888776677788
Q ss_pred HHHhcCceEEEEcc
Q 038104 106 ILRHSEAKVFFVDC 119 (567)
Q Consensus 106 ~l~~~~~~~ii~~~ 119 (567)
.++..++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999875
No 250
>PRK06381 threonine synthase; Validated
Probab=32.88 E-value=4.6e+02 Score=25.36 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHcC-CceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcccee
Q 038104 15 SPLTFLKRAAAVYG-NRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVL 91 (567)
Q Consensus 15 tl~~~l~~~a~~~p-~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 91 (567)
|..-.+.+..+... .++++-.++ .+=||++ +.+..+...+.+.|. ++|+ ....+-.-..+.++|...|..+
T Consensus 16 TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~lv-~aSsGN~g~alA~~aa~~G~~~ 89 (319)
T PRK06381 16 TPLLRARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGIT-VGTCGNYGASIAYFARLYGLKA 89 (319)
T ss_pred CceeEhHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEEE-EeCCcHHHHHHHHHHHHcCCcE
Confidence 44444444444443 467887765 3444444 223333333445552 3443 3455666777778888999988
Q ss_pred eeccCCCChHHHHHHHHhcCceEEEEcccch
Q 038104 92 NTINVRLDAKNVASILRHSEAKVFFVDCQYV 122 (567)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (567)
..+-|...+..-...++..++++++++....
T Consensus 90 ~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 90 VIFIPRSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred EEEECCCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 8877776666677899999999999987643
No 251
>PRK13391 acyl-CoA synthetase; Provisional
Probab=32.76 E-value=4.4e+02 Score=27.40 Aligned_cols=97 Identities=9% Similarity=0.065 Sum_probs=66.5
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR- 256 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~- 256 (567)
.++.++.+...+| -.+|...+...+..... ..++.+++++....+-.... +...+.++..|...+.++
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 3455665544332 24788888666655544 34788899998887764432 334667777888887775
Q ss_pred CCCHHHHHHHHHhcCcceeecchHHHHHH
Q 038104 257 NTTAYDMYRNISQHRVTHMCCAPIVFNIL 285 (567)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 285 (567)
..+.+.+...++..++..+++.+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 45788899999999999998887665443
No 252
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=32.52 E-value=1.4e+02 Score=25.91 Aligned_cols=25 Identities=24% Similarity=0.258 Sum_probs=20.4
Q ss_pred chHHHHHHHHcCCCceEEEEEeecC
Q 038104 451 SSVELENVLFRHPRVLEAAVVAMPH 475 (567)
Q Consensus 451 ~~~~iE~~l~~~~~v~~~~v~~~~~ 475 (567)
-...|+..+.+.++|.++.|+...+
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~ 100 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDD 100 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECC
Confidence 3467888899999999999997644
No 253
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=31.96 E-value=76 Score=28.13 Aligned_cols=47 Identities=17% Similarity=0.321 Sum_probs=33.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--hHHHHHHHHHh
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPN--IPAMYEMHFAV 84 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~--~~~~~~~~lA~ 84 (567)
.-+||.++++.+.++|....+-|.+|.-.|+|.-.- -...+.-+|+.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~ 53 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGV 53 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCC
Confidence 458999999999999999999999997555554332 12444444444
No 254
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=31.83 E-value=5.5e+02 Score=25.87 Aligned_cols=189 Identities=10% Similarity=0.046 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHcCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHhC-----CCCCCCEEEEEcCCh-H-HHHHH
Q 038104 16 PLTFLKRAAAVYGNRTSIIYEGA--------RFNWLQTYDRCRRLASSLRSL-----NMPKHSVVSVLAPNI-P-AMYEM 80 (567)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~-----g~~~gd~V~i~~~~~-~-~~~~~ 80 (567)
..+++..+.+++|+.......+. -=-|.-+...-+.+|.++.+. .+.|.. |.+....+ . +.+..
T Consensus 86 c~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~-~Vv~~G~T~ane~l~f 164 (471)
T KOG0256|consen 86 CFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPER-VVVTNGATSANETLMF 164 (471)
T ss_pred HHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCccCccc-eEEecccchhhHHHHH
Confidence 35677778888887665544431 223555556667788888652 234433 33333322 2 33333
Q ss_pred HHH--------------------hhhccceeeeccC------CCChHHHHHHHHhc-----CceEEEEcc-c-------c
Q 038104 81 HFA--------------------VPMAEAVLNTINV------RLDAKNVASILRHS-----EAKVFFVDC-Q-------Y 121 (567)
Q Consensus 81 ~lA--------------------~~~~G~~~v~l~~------~~~~~~l~~~l~~~-----~~~~ii~~~-~-------~ 121 (567)
.|| .|+.|+-.+|+.- ..+.+.++..+++. +.+.+|... + .
T Consensus 165 cLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~ 244 (471)
T KOG0256|consen 165 CLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLS 244 (471)
T ss_pred HhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccC
Confidence 333 7889988888753 33455666666543 566555532 1 1
Q ss_pred hHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCc--cCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEecc---CCCC
Q 038104 122 VQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGI--RFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTS---GTTS 196 (567)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS---GtTG 196 (567)
.+.+...+.-. ..+.+-++.++...... ..+-.++.++..... .+++.+.++.-+| |-.|
T Consensus 245 ~e~L~~ll~Fa-------~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~--------~~~~rvHivyslSKD~GlpG 309 (471)
T KOG0256|consen 245 PEELISLLNFA-------SRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPH--------LDPDRVHIVYSLSKDFGLPG 309 (471)
T ss_pred HHHHHHHHHHH-------hhcceEEEeehhhcccccCccCceEHHHHhhccc--------cCCCcEEEEEEeccccCCCc
Confidence 22333333222 22444444443221110 012223333322221 2455666666777 5556
Q ss_pred CCceEEechHHHHHHhhHhhhhcc
Q 038104 197 APKGVVYSHRGAYLSTLSLILGWE 220 (567)
Q Consensus 197 ~pK~v~~~~~~l~~~~~~~~~~~~ 220 (567)
..-|+++|+..-+.++...+..++
T Consensus 310 fRvGviYS~ne~VvsaA~kmssf~ 333 (471)
T KOG0256|consen 310 FRVGVIYSNNEDVVSAATKMSSFG 333 (471)
T ss_pred eEEEEEEecChHHHHHHHHHhhcc
Confidence 667999999887777777665554
No 255
>PRK06839 acyl-CoA synthetase; Validated
Probab=31.60 E-value=4.5e+02 Score=27.03 Aligned_cols=85 Identities=8% Similarity=-0.068 Sum_probs=62.3
Q ss_pred EEechHHHHHHhhHhhhh----ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCccee
Q 038104 201 VVYSHRGAYLSTLSLILG----WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHM 275 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l 275 (567)
..+|+..+...+...... .++.+++++...++-.... ...++.++..|...+.++ ..+++++...+++.+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i 104 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVL 104 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEE
Confidence 468888887766665543 4688999999888765332 334667777788877775 4678888999999999999
Q ss_pred ecchHHHHHHH
Q 038104 276 CCAPIVFNILL 286 (567)
Q Consensus 276 ~~~p~~~~~l~ 286 (567)
+..+.....+.
T Consensus 105 ~~~~~~~~~~~ 115 (496)
T PRK06839 105 FVEKTFQNMAL 115 (496)
T ss_pred EEcHHHHHHHH
Confidence 99887765543
No 256
>PRK06382 threonine dehydratase; Provisional
Probab=31.42 E-value=3.9e+02 Score=27.02 Aligned_cols=50 Identities=8% Similarity=0.048 Sum_probs=38.5
Q ss_pred hHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchH
Q 038104 74 IPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 74 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (567)
+=.-..+.++|...|..+..+-|...+..-...++..+++++++......
T Consensus 82 GN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 82 GNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred CHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 44455566888899999888888776667778899999999998765433
No 257
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=31.22 E-value=3.3e+02 Score=29.72 Aligned_cols=85 Identities=12% Similarity=-0.070 Sum_probs=62.7
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..+++++|++...++-.... +...+.++..|+..+.+. ....+++...+++.+++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45788888776665544 45789999999888764332 234567777888877765 56788899999999999999
Q ss_pred cchHHHHHHH
Q 038104 277 CAPIVFNILL 286 (567)
Q Consensus 277 ~~p~~~~~l~ 286 (567)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776665553
No 258
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.08 E-value=1.6e+02 Score=31.12 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred eeeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCChHH-HHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLR-SLNMPKHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~-~~g~~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|...+.... .+..+. ..+++++|++....|-.-. ....+++.+..|+..+...+...++.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 457766654322 222332 3578889988877764322 233346778899998877777889999999999999999
Q ss_pred EEcccchHHHH
Q 038104 116 FVDCQYVQLAR 126 (567)
Q Consensus 116 i~~~~~~~~~~ 126 (567)
...+..+..+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 88877665443
No 259
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=30.77 E-value=4.3e+02 Score=27.26 Aligned_cols=85 Identities=8% Similarity=0.035 Sum_probs=61.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH-HHHHHHHHhhhccceeeeccCC--CChHHHHHHHHhcCceE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP-AMYEMHFAVPMAEAVLNTINVR--LDAKNVASILRHSEAKV 114 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (567)
..+|+..+...+..+... .++..+|++....|... ..+..+++++..|+..+..++. .+...+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 468888887666544433 47788887777666543 2345567888999999887754 46778889999999999
Q ss_pred EEEcccchHHH
Q 038104 115 FFVDCQYVQLA 125 (567)
Q Consensus 115 ii~~~~~~~~~ 125 (567)
+...+...+.+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 98887765543
No 260
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.48 E-value=2.1e+02 Score=29.20 Aligned_cols=50 Identities=12% Similarity=-0.031 Sum_probs=21.7
Q ss_pred EcCChHHHHH-HHHHhhhccceeeeccCCCC--hHHHHHHHHhcCceEEEEcc
Q 038104 70 LAPNIPAMYE-MHFAVPMAEAVLNTINVRLD--AKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 70 ~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~ii~~~ 119 (567)
..+++...+. ++++++..|-.++.-++.+. ..-+...+...+++..+++.
T Consensus 81 ~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 81 ATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 3444433333 33345555554444443332 12223334555666555554
No 261
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=30.46 E-value=4.3e+02 Score=24.50 Aligned_cols=98 Identities=14% Similarity=0.280 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccC--CCChHH---HHHHHHhcCceE
Q 038104 42 WLQTYDRCRRLASSLRSL--NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINV--RLDAKN---VASILRHSEAKV 114 (567)
Q Consensus 42 y~el~~~v~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~ 114 (567)
+.++.++...+...+.+. .++ + +..+...+..+++.-.|++-..|.. -+.+ ..++++ +...++..+.++
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~-~-~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~ 202 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLP-G-RPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKC 202 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSS-G-GEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SE
T ss_pred HHHHHHHHHHHHHHHHHHhhccc-C-CeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcE
Confidence 445555566666666542 222 2 5667788889999988888776655 1223 334444 555568889999
Q ss_pred EEEcccchHHHHHHhhhhhccccCCCCCeEEEEeCC
Q 038104 115 FFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDI 150 (567)
Q Consensus 115 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 150 (567)
||++....+...+.+..- ....++.++..
T Consensus 203 i~~e~~~~~~~~~~la~~-------~g~~vv~ld~l 231 (256)
T PF01297_consen 203 IFTEPQFSSKLAEALAKE-------TGVKVVYLDPL 231 (256)
T ss_dssp EEEETTS-THHHHHHHHC-------CT-EEEESSTT
T ss_pred EEecCCCChHHHHHHHHH-------cCCcEEEeCCC
Confidence 999887776655555321 23455666554
No 262
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=30.44 E-value=3.2e+02 Score=22.80 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHhC---CCCCCCEEEE-EcCChHHHHHHH-HHhhhccceeeeccCCC-------ChHHHHHHHHhcC
Q 038104 44 QTYDRCRRLASSLRSL---NMPKHSVVSV-LAPNIPAMYEMH-FAVPMAEAVLNTINVRL-------DAKNVASILRHSE 111 (567)
Q Consensus 44 el~~~v~~la~~L~~~---g~~~gd~V~i-~~~~~~~~~~~~-lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~ 111 (567)
.|.+.+..+-....+. ..-+|..|++ +..+|...-..| .|+.++|+.++.+++.. +..+....|...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3444455555444432 2445666555 556676665555 78999999999998643 447777888888
Q ss_pred ceEEEEcccchHHHHHHhhh
Q 038104 112 AKVFFVDCQYVQLAREALKL 131 (567)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~ 131 (567)
+++|++-......+.+..+.
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~ 114 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEH 114 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHH
T ss_pred hheEEEEeccchHHHHHHHh
Confidence 88888765555555555443
No 263
>PRK05942 aspartate aminotransferase; Provisional
Probab=30.41 E-value=5.7e+02 Score=25.59 Aligned_cols=19 Identities=16% Similarity=0.074 Sum_probs=8.9
Q ss_pred CCCCCceEEechHHHHHHh
Q 038104 194 TTSAPKGVVYSHRGAYLST 212 (567)
Q Consensus 194 tTG~pK~v~~~~~~l~~~~ 212 (567)
..|..-|..+....+....
T Consensus 247 ~~GlRiG~i~~~~~l~~~l 265 (394)
T PRK05942 247 MAGWRVGFVVGNRHIIQGL 265 (394)
T ss_pred ChhhheeeeecCHHHHHHH
Confidence 3444445555555444333
No 264
>PLN03102 acyl-activating enzyme; Provisional
Probab=30.39 E-value=2.3e+02 Score=30.23 Aligned_cols=83 Identities=8% Similarity=0.043 Sum_probs=60.7
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+..... ..+++++|++...+|-.-.+ ...++.++..|+..+.++ ..+.+++...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 5788888766666544 34789999999988864322 234567777888877665 568889999999999999998
Q ss_pred chHHHHHH
Q 038104 278 APIVFNIL 285 (567)
Q Consensus 278 ~p~~~~~l 285 (567)
.+.....+
T Consensus 118 ~~~~~~~~ 125 (579)
T PLN03102 118 DRSFEPLA 125 (579)
T ss_pred ChhhHHHH
Confidence 77655433
No 265
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=30.09 E-value=1.1e+02 Score=29.78 Aligned_cols=54 Identities=7% Similarity=-0.020 Sum_probs=43.4
Q ss_pred eeeHHHHHHH------HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 39 RFNWLQTYDR------CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 39 ~~Ty~el~~~------v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
.+.|.++.+. ...+...+.++|+.+++.|.++|..+.....+++++-.+|..-+
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 4667776543 46677778888999999999999999999999999999997543
No 266
>PRK12414 putative aminotransferase; Provisional
Probab=29.42 E-value=5.8e+02 Score=25.41 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEE------
Q 038104 49 CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFV------ 117 (567)
Q Consensus 49 v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~------ 117 (567)
...+...++.. +.+||.|++-.|. +......+...|+.+++++.. .+.+.+...++. +.++|+.
T Consensus 100 ~~al~~~~~~l-~~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~NP 174 (384)
T PRK12414 100 SEGLYAAISAL-VHPGDEVIYFEPS---FDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP-RTRMIIVNTPHNP 174 (384)
T ss_pred HHHHHHHHHHh-cCCCCEEEEeCCC---ccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc-ccEEEEEcCCCCC
Q ss_pred -----cccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCC-CCCcEEEEec
Q 038104 118 -----DCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHD-EWDPITLNYT 191 (567)
Q Consensus 118 -----~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~i~~T 191 (567)
+.+....+.+... ....++..|+ .|.++.-.+........... .+...++---
T Consensus 175 TG~~~s~~~~~~i~~~a~---------~~~~~ii~De------------~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~Sf 233 (384)
T PRK12414 175 SATVFSAADLARLAQLTR---------NTDIVILSDE------------VYEHVVFDGARHHSMARHRELAERSVIVSSF 233 (384)
T ss_pred CCcCCCHHHHHHHHHHHH---------HCCeEEEEhh------------hhhhccCCCCCccCcccCcCccCcEEEEecc
Q ss_pred c---CCCCCCceEEechHHHHHHhhHhhhhccCCCC
Q 038104 192 S---GTTSAPKGVVYSHRGAYLSTLSLILGWEMGSA 224 (567)
Q Consensus 192 S---GtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~ 224 (567)
| |.+|.--|.+.....+................
T Consensus 234 SK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s 269 (384)
T PRK12414 234 GKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSAD 269 (384)
T ss_pred cccccCccceEEEEecCHHHHHHHHHHHhheecCCC
No 267
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=29.05 E-value=4.3e+02 Score=27.18 Aligned_cols=65 Identities=9% Similarity=0.099 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHc-----CCceEEEeCC-eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHH
Q 038104 14 LSPLTFLKRAAAVY-----GNRTSIIYEG-ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYE 79 (567)
Q Consensus 14 ~tl~~~l~~~a~~~-----p~~~a~~~~~-~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~ 79 (567)
.++.+.+++..+.+ -+..|+...+ ...+|+++.+.+..++..+.+. ++++..+.|++.+..--+.
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKvL 423 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALPGKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKVL 423 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHHH
Confidence 57777777776653 3366777765 6899999999999999999986 5677788888888754443
No 268
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=28.99 E-value=3.4e+02 Score=32.85 Aligned_cols=97 Identities=9% Similarity=-0.108 Sum_probs=64.1
Q ss_pred CCCCcEEEEeccCCCCCCceEEechHHHHHHhhHhhhh---ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC
Q 038104 181 DEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILG---WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN 257 (567)
Q Consensus 181 ~~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~ 257 (567)
.++.+|++...+...+......+|++.+...+...... .+.++++++...++-.... +..+++++..|+..+.++.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 45666665432211111123468999887766665543 4788999999888765433 3356777888888887754
Q ss_pred -CCHHHHHHHHHhcCcceeecc
Q 038104 258 -TTAYDMYRNISQHRVTHMCCA 278 (567)
Q Consensus 258 -~~~~~~~~~i~~~~~t~l~~~ 278 (567)
..++++...++..++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 566778888888888887764
No 269
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=28.93 E-value=1.5e+02 Score=28.17 Aligned_cols=65 Identities=9% Similarity=-0.034 Sum_probs=51.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHhhhccceeee-ccCCCChHHHHHHHHhcCceEEEEcccchHH
Q 038104 60 NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT-INVRLDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 60 g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
.+++||.|+=-..||.---+.+-=|-..|..-+- +...-..+++...|...++..||++.+....
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 5789999998889987666666666677765554 4455678999999999999999999887643
No 270
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=28.40 E-value=4.1e+02 Score=25.59 Aligned_cols=114 Identities=8% Similarity=0.103 Sum_probs=64.5
Q ss_pred Cccccc-ccccCCCCCHHHHHHHHHHHcCCceEEEeCCeeeeHHHHHHH---------HHHHHHHHHhCCCCCCCEEEEE
Q 038104 1 MDKLSK-CEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDR---------CRRLASSLRSLNMPKHSVVSVL 70 (567)
Q Consensus 1 ~~~~~~-~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~---------v~~la~~L~~~g~~~gd~V~i~ 70 (567)
||++.- |+|+ ++--.+-++...++||+.+.+.+-|. .+++... +.++-.++ ..+++| |+
T Consensus 96 ~Pd~~AgCsmA--~~~~~~~~~~~~~~~P~~~vV~YvNt---sA~vKA~~Di~cTSsNAvkvVe~~-----~~~~~I-if 164 (324)
T COG0379 96 LPDLEAGCSMA--DMITAEEVRAFKEKHPDAPVVTYVNT---SAEVKAEADICCTSSNAVKVVESA-----LDGDKI-LF 164 (324)
T ss_pred cCCCCCCCCcc--cCCCHHHHHHHHHHCCCCceEEEeeC---hHHHHhhcCeEEecchHHHHHHhc-----cCCCcE-EE
Confidence 344443 6665 33344566666889999999999763 2333332 33333333 234544 55
Q ss_pred cCChHHHHHHHHHhhhccc-ee------eeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHH
Q 038104 71 APNIPAMYEMHFAVPMAEA-VL------NTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREA 128 (567)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~-~~------v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (567)
.|+. ...-+-.-..|. -. +.+.-.++.+++..+-+...--.|++.+++...+.+.
T Consensus 165 ~PD~---~Lg~yva~~tg~k~ii~w~G~C~VH~~ft~~~i~~~k~~~Pda~vlvHPEC~~~Vv~~ 226 (324)
T COG0379 165 LPDK---NLGRYVAKQTGAKKIILWPGHCIVHEEFTAEDIEELKEKYPDAEVLVHPECPPEVVEL 226 (324)
T ss_pred cCcH---HHHHHHHHHcCCCcEEEECCccchhhhcCHHHHHHHHHHCCCCEEEECCCCCHHHHHh
Confidence 5542 222223334544 22 3344567788888888887777777888876655443
No 271
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=28.10 E-value=1.7e+02 Score=21.69 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=23.3
Q ss_pred eEEEeCCe------eeeHHHHHH-HHHHHHHHHHhCCCC
Q 038104 31 TSIIYEGA------RFNWLQTYD-RCRRLASSLRSLNMP 62 (567)
Q Consensus 31 ~a~~~~~~------~~Ty~el~~-~v~~la~~L~~~g~~ 62 (567)
+|+++.++ +++-.|+.+ ++.+++..|.++|++
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~ 54 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS 54 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT--
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce
Confidence 46666652 455678888 999999999998764
No 272
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=27.92 E-value=3.3e+02 Score=28.78 Aligned_cols=83 Identities=7% Similarity=-0.086 Sum_probs=60.7
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|+.++...+..... ..++.++|++...++-.... ...++.++..|+..+.++ ....+++...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 36788888766655544 34788999999888764332 334577778888888775 45788899999999999998
Q ss_pred cchHHHHH
Q 038104 277 CAPIVFNI 284 (567)
Q Consensus 277 ~~p~~~~~ 284 (567)
....+...
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 273
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=27.91 E-value=4.2e+02 Score=24.12 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=52.9
Q ss_pred chHhhhhHHHHHHHHhh-Cceeeee-CCCCHHHHHHHHHhcCcceeecchHHHHHHHh------cCCcccccCCCceEEE
Q 038104 232 PMFHCNGWTFTWGVAAR-GGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPIVFNILLQ------AKPEERKEIASPVQIL 303 (567)
Q Consensus 232 p~~~~~g~~~~~~~~~~-g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~------~~~~~~~~l~~l~~~~ 303 (567)
.=-|..|...+-..+-. |--++-+ ....++.+....++++++++..+-.+=..+.. ... ...++.--.+.
T Consensus 114 GDvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~--eeGiRd~v~v~ 191 (227)
T COG5012 114 GDVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLK--EEGIRDKVIVM 191 (227)
T ss_pred ccHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHH--HcCCccCeEEe
Confidence 44677776655455533 4444434 34678899999999999999887544333222 221 12333444577
Q ss_pred EcCCCCCHHHHHHH
Q 038104 304 TGGAPPPASLLEEI 317 (567)
Q Consensus 304 ~~g~~l~~~~~~~~ 317 (567)
.||+|++.++.+.+
T Consensus 192 vGGApvtq~~a~~i 205 (227)
T COG5012 192 VGGAPVTQDWADKI 205 (227)
T ss_pred ecCccccHHHHHHh
Confidence 79999999887765
No 274
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=27.78 E-value=5.2e+02 Score=24.32 Aligned_cols=106 Identities=11% Similarity=0.160 Sum_probs=62.9
Q ss_pred CceEEEeCC--eeeeH--HHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC--ChHH
Q 038104 29 NRTSIIYEG--ARFNW--LQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL--DAKN 102 (567)
Q Consensus 29 ~~~a~~~~~--~~~Ty--~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~--~~~~ 102 (567)
.++|+..++ ..+.| .+..+.+..+-..|.++| |..++-.+..+++.+-.++--...- ....+.++. +..-
T Consensus 162 q~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g---~~~lisfSRRTp~~~~s~l~~~l~s-~~~i~w~~~d~g~NP 237 (329)
T COG3660 162 QRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQG---GSFLISFSRRTPDTVKSILKNNLNS-SPGIVWNNEDTGYNP 237 (329)
T ss_pred ceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCC---ceEEEEeecCCcHHHHHHHHhcccc-CceeEeCCCCCCCCc
Confidence 367887765 45555 344444444444454544 6677778888999988887652222 222222322 2221
Q ss_pred HHHHHHhcCceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeC
Q 038104 103 VASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDD 149 (567)
Q Consensus 103 l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 149 (567)
-..+ ...+++||+..+...+..++.. ..+++..+..
T Consensus 238 Y~~~--La~Adyii~TaDSinM~sEAas---------TgkPv~~~~~ 273 (329)
T COG3660 238 YIDM--LAAADYIISTADSINMCSEAAS---------TGKPVFILEP 273 (329)
T ss_pred hHHH--HhhcceEEEecchhhhhHHHhc---------cCCCeEEEec
Confidence 2222 3568889999988888888765 5566665543
No 275
>PRK09224 threonine dehydratase; Reviewed
Probab=27.76 E-value=6.1e+02 Score=26.61 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=60.6
Q ss_pred HHHHHcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCC
Q 038104 22 RAAAVYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLD 99 (567)
Q Consensus 22 ~~a~~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 99 (567)
+..+....++++-.++. +-||+. .-..+.++. |.+...++| | |.+..+=......++|...|..++.+-|...
T Consensus 28 ~Ls~~~g~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~g--v-V~aSaGNha~avA~aa~~lGi~~~IvmP~~t 102 (504)
T PRK09224 28 KLSARLGNQVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQLARG--V-ITASAGNHAQGVALSAARLGIKAVIVMPVTT 102 (504)
T ss_pred HhHHHhCCEEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhcCCE--E-EEECcCHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 33444455777777653 445555 222333333 322111222 3 2233455566666788899998888888776
Q ss_pred hHHHHHHHHhcCceEEEEcccchHHHHH
Q 038104 100 AKNVASILRHSEAKVFFVDCQYVQLARE 127 (567)
Q Consensus 100 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (567)
+..-...++..+++++++...+.+....
T Consensus 103 p~~K~~~~r~~GA~Vi~~g~~~~~a~~~ 130 (504)
T PRK09224 103 PDIKVDAVRAFGGEVVLHGDSFDEAYAH 130 (504)
T ss_pred CHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 7666778999999999998665444433
No 276
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.75 E-value=3.5e+02 Score=22.39 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcc
Q 038104 75 PAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 75 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (567)
.-..+....+-..|.-++.+-...+.+++.....+.+|++|..+.
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344455556668999999999999999999999999999999874
No 277
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=27.72 E-value=8e+02 Score=26.75 Aligned_cols=84 Identities=8% Similarity=-0.145 Sum_probs=60.4
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..++.++|++...++-.... ....++++..|+..+.+. ...++++...++..+++.++
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 34688888766655544 45889999999888764332 123566777888777664 56888899999999999999
Q ss_pred cchHHHHHH
Q 038104 277 CAPIVFNIL 285 (567)
Q Consensus 277 ~~p~~~~~l 285 (567)
.....+..+
T Consensus 154 ~~~~~~~~~ 162 (660)
T PLN02430 154 VQDKKIKEL 162 (660)
T ss_pred ECHHHHHHH
Confidence 877644433
No 278
>PRK06145 acyl-CoA synthetase; Validated
Probab=27.65 E-value=6.8e+02 Score=25.78 Aligned_cols=85 Identities=11% Similarity=0.049 Sum_probs=58.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|+..+...+. ......+++.+|++....|-.- .+....++++..|+..+.. +..++..+...+++.++..+
T Consensus 167 v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 4688888865443 2334458899998887776532 2223335666778776554 56788999999999999999
Q ss_pred EEcccchHHHH
Q 038104 116 FVDCQYVQLAR 126 (567)
Q Consensus 116 i~~~~~~~~~~ 126 (567)
...+.....+.
T Consensus 243 ~~~P~~~~~ll 253 (497)
T PRK06145 243 WMAPVMLSRVL 253 (497)
T ss_pred EehHHHHHHHH
Confidence 98877655443
No 279
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.59 E-value=5.1e+02 Score=27.18 Aligned_cols=94 Identities=10% Similarity=0.014 Sum_probs=61.2
Q ss_pred CCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCC-CEEEEEcCCh--HHHHHHHHHhhhccceeeecc
Q 038104 28 GNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKH-SVVSVLAPNI--PAMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~g-d~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (567)
++.++++.. +..+|+..+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+.
T Consensus 151 ~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 151 EDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 456666552 146899888765554433 3467776 7777776653 444555666778898888776
Q ss_pred CC---CChHHHHHHHHhcCceEEEEcccchHH
Q 038104 96 VR---LDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 96 ~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
+. ..+..+..++++.++.++.+.......
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYAL 259 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHH
Confidence 53 256677889999999987654444333
No 280
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=27.40 E-value=5e+02 Score=26.64 Aligned_cols=87 Identities=5% Similarity=-0.122 Sum_probs=57.0
Q ss_pred ceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 30 RTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 30 ~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
++++-.++. +-|++. +.+..+-....+.|. ++|++|.-. ..+=.-..+.++|...|..+..+-|...+..-...
T Consensus 27 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKD--RIALRMIEDAEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHH--HHHHHHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 566666553 333332 223333333334454 677765544 44556666777888999998888886666677888
Q ss_pred HHhcCceEEEEcc
Q 038104 107 LRHSEAKVFFVDC 119 (567)
Q Consensus 107 l~~~~~~~ii~~~ 119 (567)
++..++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999874
No 281
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=27.27 E-value=6.1e+02 Score=26.57 Aligned_cols=84 Identities=8% Similarity=0.059 Sum_probs=59.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|...+...+..... ..+++.+|++...+|-.- .++...+..+..|...+. .+..++..+...+++.++.++
T Consensus 213 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~l~~~~vt~~ 288 (538)
T TIGR03208 213 VMHTANTLFSNIHPYAE---RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-QDIWNPARAAELIRETGVTFT 288 (538)
T ss_pred EEeehHHHHHHHHHHHh---hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-cCccCHHHHHHHHHHhCCeEE
Confidence 46788777665544433 346788998888887643 344556677778887664 456788999999999999998
Q ss_pred EEcccchHHH
Q 038104 116 FVDCQYVQLA 125 (567)
Q Consensus 116 i~~~~~~~~~ 125 (567)
...+.....+
T Consensus 289 ~~~p~~~~~l 298 (538)
T TIGR03208 289 MASTPFLTDL 298 (538)
T ss_pred ecCHHHHHHH
Confidence 8776655443
No 282
>PRK06060 acyl-CoA synthetase; Validated
Probab=27.20 E-value=4e+02 Score=29.30 Aligned_cols=88 Identities=6% Similarity=-0.039 Sum_probs=60.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|...+...+..+.. ...++.++|++....+-.. .+...++..+..|+..+..+.....+.+..+++..++.++
T Consensus 163 V~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 240 (705)
T PRK06060 163 AIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVL 240 (705)
T ss_pred EEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEE
Confidence 45788777665544322 1246788887776665432 2233456677889888877666778888899999999999
Q ss_pred EEcccchHHHHH
Q 038104 116 FVDCQYVQLARE 127 (567)
Q Consensus 116 i~~~~~~~~~~~ 127 (567)
.+.+..+..+..
T Consensus 241 ~~~P~~l~~l~~ 252 (705)
T PRK06060 241 YGVPNFFARVID 252 (705)
T ss_pred eeHHHHHHHHHH
Confidence 988877665544
No 283
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=27.04 E-value=4.8e+02 Score=27.33 Aligned_cols=77 Identities=16% Similarity=0.041 Sum_probs=52.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCC-CCCEEEEEcCChHH-HHHHHHHhhhccceeeeccC-CC--ChHHHHHHHHhcCc
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMP-KHSVVSVLAPNIPA-MYEMHFAVPMAEAVLNTINV-RL--DAKNVASILRHSEA 112 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~-~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~-~~--~~~~l~~~l~~~~~ 112 (567)
..+|++.+...+..++.. .++. ++|++...+|-.-. .+..+++.+..|+..+..+. .. .+..+...+++.++
T Consensus 170 V~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (525)
T PRK05851 170 AILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRA 246 (525)
T ss_pred EEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCC
Confidence 468998888776665543 3666 88888877775422 22345677888988876653 12 45678888999998
Q ss_pred eEEEE
Q 038104 113 KVFFV 117 (567)
Q Consensus 113 ~~ii~ 117 (567)
..+.+
T Consensus 247 t~~~~ 251 (525)
T PRK05851 247 TLTAA 251 (525)
T ss_pred eEEeC
Confidence 86644
No 284
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=27.03 E-value=4.5e+02 Score=23.36 Aligned_cols=89 Identities=13% Similarity=0.183 Sum_probs=53.2
Q ss_pred EEEEecch--HhhhhHHHHHHHH-hhCceeeee-CCCCHHHHHHHHHhcCcceeecchHH------HHHHHhcCCccccc
Q 038104 226 VYLWSLPM--FHCNGWTFTWGVA-ARGGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPIV------FNILLQAKPEERKE 295 (567)
Q Consensus 226 ~~~~~~p~--~~~~g~~~~~~~~-~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~------~~~l~~~~~~~~~~ 295 (567)
+++...+. .|..|...+-..+ ..|..++.. ...+++++.+.+++.+|+++..+-+. +..+.+...+ ..
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~--~~ 163 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKE--EG 163 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHH--cC
Confidence 44444433 7888876654444 346665544 45688999999999999998766322 2222222211 11
Q ss_pred CCCceEEEEcCCCCCHHHHHH
Q 038104 296 IASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 296 l~~l~~~~~~g~~l~~~~~~~ 316 (567)
+..--.+++||.++++++.+.
T Consensus 164 ~~~~v~i~vGG~~~~~~~~~~ 184 (197)
T TIGR02370 164 YRDSVKFMVGGAPVTQDWADK 184 (197)
T ss_pred CCCCCEEEEEChhcCHHHHHH
Confidence 122235889999998765443
No 285
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=26.94 E-value=5.1e+02 Score=26.94 Aligned_cols=83 Identities=8% Similarity=-0.046 Sum_probs=60.1
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|...+...+..... ..++.++|++....+-....- ...+.++..|...+.++ ...++.+...+++.+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4677777665555443 457889999998887654332 34567777888877764 568888999999999999999
Q ss_pred chHHHHHH
Q 038104 278 APIVFNIL 285 (567)
Q Consensus 278 ~p~~~~~l 285 (567)
.+.....+
T Consensus 116 ~~~~~~~~ 123 (517)
T PRK08008 116 SAQFYPMY 123 (517)
T ss_pred ecchhHHH
Confidence 87655443
No 286
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.34 E-value=4.9e+02 Score=25.99 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=57.8
Q ss_pred HHcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHH
Q 038104 25 AVYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKN 102 (567)
Q Consensus 25 ~~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 102 (567)
+....++++-.++. +=||++ +-+......+.+.|..++ | +....+=......++|...|..+..+-|...+..
T Consensus 11 ~~~g~~i~~K~E~~~ptgS~K~--R~a~~~i~~~~~~~~~~~--v-v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~ 85 (380)
T TIGR01127 11 DITGSEVYLKLENLQKTGSFKI--RGALNKIANLSEDQRQRG--V-VAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPS 85 (380)
T ss_pred HHhCCeEEEEecCCCCCCCcHH--HHHHHHHHhcchhccCCE--E-EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHH
Confidence 34445677777653 445544 222222222333343322 2 3333344556666788899998888888777777
Q ss_pred HHHHHHhcCceEEEEcccchH
Q 038104 103 VASILRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 103 l~~~l~~~~~~~ii~~~~~~~ 123 (567)
-...++..++++++++....+
T Consensus 86 k~~~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 86 KVKATKSYGAEVILHGDDYDE 106 (380)
T ss_pred HHHHHHHCCCEEEEECCCHHH
Confidence 788899999999998765433
No 287
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.25 E-value=4.7e+02 Score=23.29 Aligned_cols=97 Identities=5% Similarity=-0.018 Sum_probs=63.2
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHh-------CCCCCCCEEEEEcCCh----HHHHHHHHHhhhccceeeeccCCCChHHHH
Q 038104 36 EGARFNWLQTYDRCRRLASSLRS-------LNMPKHSVVSVLAPNI----PAMYEMHFAVPMAEAVLNTINVRLDAKNVA 104 (567)
Q Consensus 36 ~~~~~Ty~el~~~v~~la~~L~~-------~g~~~gd~V~i~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (567)
....++..|.+-.++.+-..|.. .+-..+-+|.+.+..+ +-..+....+-..|.-++.+..+.+.+++.
T Consensus 47 ~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~ 126 (201)
T cd02070 47 EEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFV 126 (201)
T ss_pred ccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 44688888888776655554432 1221234566665543 223333444557899999999999999999
Q ss_pred HHHHhcCceEEEEccc---chHHHHHHhhhh
Q 038104 105 SILRHSEAKVFFVDCQ---YVQLAREALKLY 132 (567)
Q Consensus 105 ~~l~~~~~~~ii~~~~---~~~~~~~~~~~~ 132 (567)
..+.+.+|++|..+.. ....+.+.++.+
T Consensus 127 ~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l 157 (201)
T cd02070 127 EAVKEHKPDILGLSALMTTTMGGMKEVIEAL 157 (201)
T ss_pred HHHHHcCCCEEEEeccccccHHHHHHHHHHH
Confidence 9999999999888643 334444444444
No 288
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=26.24 E-value=1.4e+02 Score=21.97 Aligned_cols=41 Identities=15% Similarity=-0.063 Sum_probs=33.3
Q ss_pred HHHHHh-CCCCCCCEEEEEcCChHHHHHHHHHhhhccceeee
Q 038104 53 ASSLRS-LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNT 93 (567)
Q Consensus 53 a~~L~~-~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 93 (567)
..+|++ .|+++|+.++.+..+..|.+..+=|.+++.-+-+.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~ 44 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELA 44 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeE
Confidence 456776 69999999999998899998888888888765543
No 289
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=26.00 E-value=4.8e+02 Score=23.57 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=0.0
Q ss_pred CCCCEEEEecch-HhhhhHHHHHHHHhhCceeeee--CCCCHHHHHHHHHhcCcceeecc---hHHHHHHHhcCCccccc
Q 038104 222 GSAPVYLWSLPM-FHCNGWTFTWGVAARGGTNVCL--RNTTAYDMYRNISQHRVTHMCCA---PIVFNILLQAKPEERKE 295 (567)
Q Consensus 222 ~~~d~~~~~~p~-~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~~---p~~~~~l~~~~~~~~~~ 295 (567)
..+.+++.+.+- .|.-|...+-..+-..|.-++. ...+++++.+.+.+.+|+++..+ +.....+.+....-...
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCceEEEEcCCCCCHHHHHH
Q 038104 296 IASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 296 l~~l~~~~~~g~~l~~~~~~~ 316 (567)
..--.+++||.++++++.+.
T Consensus 167 -~~~~~i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 -GIKIPLLIGGAATSRKHTAV 186 (213)
T ss_pred -CCCCeEEEEChhcCHHHHhh
No 290
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.99 E-value=2.7e+02 Score=30.10 Aligned_cols=78 Identities=5% Similarity=-0.148 Sum_probs=55.2
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC-CC-----HHHHHHHHHhcC
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN-TT-----AYDMYRNISQHR 271 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 271 (567)
-.+|.+.+...+..... ..+++++|++...++-... .....+.++..|+..+.+.. .+ .+++...++..+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIE-HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46888888776665544 4478999999998885432 23345677778888777653 33 378889999999
Q ss_pred cceeecch
Q 038104 272 VTHMCCAP 279 (567)
Q Consensus 272 ~t~l~~~p 279 (567)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 98887753
No 291
>PLN02356 phosphateglycerate kinase
Probab=25.72 E-value=5e+02 Score=26.46 Aligned_cols=86 Identities=12% Similarity=-0.099 Sum_probs=54.3
Q ss_pred ceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 30 RTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNM-PKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 30 ~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~-~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
++.+-.++ .+=|+++ +-+..+-..+.+.|. ++|.+|+- ...+=.-+.+.++|...|..++.+-|...+.+-...
T Consensus 69 ~v~~KlE~~nPtGS~Kd--R~A~~~i~~a~~~g~~~~~g~Vve-aSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ 145 (423)
T PLN02356 69 EILGKCEFLNPGGSVKD--RVAVKIIEEALESGQLFPGGVVTE-GSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQI 145 (423)
T ss_pred EEEEEeccCCCCCCHHH--HHHHHHHHHHHhCCccCCCCEEEE-eCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHH
Confidence 44554443 3334432 223333334444444 47776553 333444677778888999988888787666677889
Q ss_pred HHhcCceEEEEc
Q 038104 107 LRHSEAKVFFVD 118 (567)
Q Consensus 107 l~~~~~~~ii~~ 118 (567)
++..++++++++
T Consensus 146 ir~~GAeVi~v~ 157 (423)
T PLN02356 146 LEALGATVERVR 157 (423)
T ss_pred HHHcCCEEEEEC
Confidence 999999999985
No 292
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.58 E-value=5.9e+02 Score=24.22 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChH---HHHHHHHhcCceEEEEc
Q 038104 42 WLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAK---NVASILRHSEAKVFFVD 118 (567)
Q Consensus 42 y~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii~~ 118 (567)
+.++.++...+-.++.+.--....+..+...+...+++--|++-..+..-.--...-++. ++...++..+.++||++
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 445555555555555442001124456667778888887777654442211111233455 45555668899999998
Q ss_pred ccchHHHHHHhh
Q 038104 119 CQYVQLAREALK 130 (567)
Q Consensus 119 ~~~~~~~~~~~~ 130 (567)
.....+..+.+.
T Consensus 236 ~~~~~~~~~~ia 247 (286)
T cd01019 236 PQFHPKIAETLA 247 (286)
T ss_pred CCCChHHHHHHH
Confidence 887665555544
No 293
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=25.35 E-value=5.3e+02 Score=25.85 Aligned_cols=68 Identities=12% Similarity=0.000 Sum_probs=49.7
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccc
Q 038104 51 RLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQY 121 (567)
Q Consensus 51 ~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (567)
.+-..|.+++.++| .|+-...| ....+.+|+.++|..+..+-|...+..--..++..++.+++.....
T Consensus 103 ~~~~kla~~~~~~g-ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 103 NALQKLAKQQKKAG-VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred HHHHHHHHhhhcCc-eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 33333333333333 34444444 5677889999999999999999999999999999999999876554
No 294
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.25 E-value=3.4e+02 Score=28.84 Aligned_cols=83 Identities=11% Similarity=-0.069 Sum_probs=60.9
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+..... ..+++.+|++....+..... +...+.++..|+..+.+. ..+.+++...+++.+++.++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4688888666655444 44788999999988764432 234667777888877664 578889999999999999998
Q ss_pred chHHHHHH
Q 038104 278 APIVFNIL 285 (567)
Q Consensus 278 ~p~~~~~l 285 (567)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 295
>PRK09192 acyl-CoA synthetase; Validated
Probab=24.96 E-value=4.9e+02 Score=27.64 Aligned_cols=85 Identities=4% Similarity=-0.182 Sum_probs=60.2
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeCC-C-------CHHHHHHHHHh
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRN-T-------TAYDMYRNISQ 269 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~-------~~~~~~~~i~~ 269 (567)
-.+|...+...+..... ..+++++|++...++..... +...+.++..|+..+.++. . ..+++...++.
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF-VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH-HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 46888888766555444 34789999999988864332 3345677788888877742 1 15788999999
Q ss_pred cCcceeecchHHHHHHH
Q 038104 270 HRVTHMCCAPIVFNILL 286 (567)
Q Consensus 270 ~~~t~l~~~p~~~~~l~ 286 (567)
.++..++........+.
T Consensus 127 ~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 127 AQPAAIITPDELLPWVN 143 (579)
T ss_pred cCCCEEEeChHHHHHHH
Confidence 99999998876655443
No 296
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.94 E-value=8.9e+02 Score=26.07 Aligned_cols=84 Identities=6% Similarity=-0.151 Sum_probs=56.9
Q ss_pred EEechHHHHHHhhHhhhhc--cCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeee-CCCC---HHHHHHHHHhcCcce
Q 038104 201 VVYSHRGAYLSTLSLILGW--EMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCL-RNTT---AYDMYRNISQHRVTH 274 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~---~~~~~~~i~~~~~t~ 274 (567)
..+|.+.+...+......+ .++++|++...++-...+ +...+.++..|+..+.+ +... .+++...++..++..
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 4578888876665554433 268899999888765432 23456677778877655 2222 467888999999999
Q ss_pred eecchHHHHHH
Q 038104 275 MCCAPIVFNIL 285 (567)
Q Consensus 275 l~~~p~~~~~l 285 (567)
+++.......+
T Consensus 133 vi~~~~~~~~~ 143 (631)
T PRK07769 133 ILTTTDSAEGV 143 (631)
T ss_pred EEEChHHHHHH
Confidence 99887655443
No 297
>PRK09082 methionine aminotransferase; Validated
Probab=24.86 E-value=7e+02 Score=24.83 Aligned_cols=150 Identities=11% Similarity=0.072 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC-----CChHHHHHHHHhcCceEEEE------
Q 038104 49 CRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR-----LDAKNVASILRHSEAKVFFV------ 117 (567)
Q Consensus 49 v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~------ 117 (567)
...+...+... +++||.|++-.| .+.....++-..|+.+++++.. .+.+.+...+.. +.+++++
T Consensus 101 ~~al~~~~~~~-~~~gd~Vli~~p---~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NP 175 (386)
T PRK09082 101 TEALFAAILAL-VRPGDEVIVFDP---SYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP-RTRLIILNTPHNP 175 (386)
T ss_pred HHHHHHHHHHH-cCCCCEEEEeCC---CchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc-cceEEEEeCCCCC
Q ss_pred -----cccchHHHHHHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEec-
Q 038104 118 -----DCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYT- 191 (567)
Q Consensus 118 -----~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T- 191 (567)
+.+....+.+... ....++..|+ .|.++...+.............+..+++.|
T Consensus 176 tG~~~~~~~~~~i~~~a~---------~~~i~li~De------------~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~ 234 (386)
T PRK09082 176 SGTVWSAADMRALWQLIA---------GTDIYVLSDE------------VYEHIVFDGAGHASVLRHPELRERAFVVSSF 234 (386)
T ss_pred CCcCCCHHHHHHHHHHHH---------HCCEEEEEeh------------hhhhhccCCCCCCChhhCcCccCcEEEEeec
Q ss_pred c---CCCCCCceEEechHHHHHHhhHhhhhccCCCC
Q 038104 192 S---GTTSAPKGVVYSHRGAYLSTLSLILGWEMGSA 224 (567)
Q Consensus 192 S---GtTG~pK~v~~~~~~l~~~~~~~~~~~~~~~~ 224 (567)
| |..|..-|.+.....++...............
T Consensus 235 SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~ 270 (386)
T PRK09082 235 GKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVN 270 (386)
T ss_pred hhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCC
No 298
>PRK08162 acyl-CoA synthetase; Validated
Probab=24.85 E-value=3.2e+02 Score=28.68 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=61.6
Q ss_pred EechHHHHHHhhHhhhh---ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLILG---WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+...... .++.++|++....+-...+ +...+..+..|+..+.++ ..+..++...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58888887666655543 4788999999888765432 234566777787777664 467889999999999999999
Q ss_pred chHHHHHH
Q 038104 278 APIVFNIL 285 (567)
Q Consensus 278 ~p~~~~~l 285 (567)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88766554
No 299
>PRK09088 acyl-CoA synthetase; Validated
Probab=24.83 E-value=5.7e+02 Score=26.27 Aligned_cols=77 Identities=8% Similarity=-0.113 Sum_probs=56.2
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|.+.+...+..... ..++.++|++....+-...+ +...+.++..|+..+.++ ...++.+...+++.+++.+++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 5788888666655433 44788999999888765442 234567777888877775 467888999999999999987
Q ss_pred ch
Q 038104 278 AP 279 (567)
Q Consensus 278 ~p 279 (567)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 55
No 300
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=24.78 E-value=5e+02 Score=23.09 Aligned_cols=85 Identities=4% Similarity=-0.047 Sum_probs=56.4
Q ss_pred CCeeeeHHHHHHHHHHHHHHHH---h-CC----CCCCCEEEEEcCCh----HHHHHHHHHhhhccceeeeccCCCChHHH
Q 038104 36 EGARFNWLQTYDRCRRLASSLR---S-LN----MPKHSVVSVLAPNI----PAMYEMHFAVPMAEAVLNTINVRLDAKNV 103 (567)
Q Consensus 36 ~~~~~Ty~el~~~v~~la~~L~---~-~g----~~~gd~V~i~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (567)
...++|-.|.+-.++.+-..+. . .. -+..-+|.+.++.+ +-..+....+-..|.-++.+.++.+.+++
T Consensus 48 ~~gei~va~~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~ 127 (197)
T TIGR02370 48 EDGELFLPHVMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTV 127 (197)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHH
Confidence 4467888777665554443332 1 11 12223566655552 33334444455689999999999999999
Q ss_pred HHHHHhcCceEEEEccc
Q 038104 104 ASILRHSEAKVFFVDCQ 120 (567)
Q Consensus 104 ~~~l~~~~~~~ii~~~~ 120 (567)
...+++.+|++|..+..
T Consensus 128 v~~~~~~~pd~v~lS~~ 144 (197)
T TIGR02370 128 VEKVKKEKPLMLTGSAL 144 (197)
T ss_pred HHHHHHcCCCEEEEccc
Confidence 99999999999988753
No 301
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=24.66 E-value=4.8e+02 Score=25.71 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=60.5
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC---------CChHHHHHHHHhcC
Q 038104 41 NWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR---------LDAKNVASILRHSE 111 (567)
Q Consensus 41 Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~ 111 (567)
.-.++......++..|.+. +| | +.++..++.+.+++.+|+...+..++-+.-. ...+..++++.+..
T Consensus 48 ~~~~~~~~~~~~~~~~~~~--~P-d-~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la 123 (346)
T PF02350_consen 48 MAKSTGLAIIELADVLERE--KP-D-AVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLA 123 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHH--T--S-EEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHhc--CC-C-EEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhh
Confidence 3467777788888888875 44 5 4556666888888889999999988888665 55677888888885
Q ss_pred ceEEEEcccchHHHHHHhhhhhccccCCCCCeEEEEeC
Q 038104 112 AKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDD 149 (567)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 149 (567)
--.+..++...+.+..... ...+|++++.
T Consensus 124 ~lhf~~t~~~~~~L~~~G~---------~~~rI~~vG~ 152 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQEGE---------PPERIFVVGN 152 (346)
T ss_dssp SEEEESSHHHHHHHHHTT-----------GGGEEE---
T ss_pred hhhccCCHHHHHHHHhcCC---------CCCeEEEECh
Confidence 5555555555555554321 2356666654
No 302
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.61 E-value=4.1e+02 Score=27.96 Aligned_cols=82 Identities=10% Similarity=-0.078 Sum_probs=59.0
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|...+...+..... ..++++++++....+-.... +..++..+..|+..+.+. .....++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 5788888666655443 34788999998887754332 334677778888887765 457788999999999999988
Q ss_pred chHHHHH
Q 038104 278 APIVFNI 284 (567)
Q Consensus 278 ~p~~~~~ 284 (567)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7765543
No 303
>PRK07867 acyl-CoA synthetase; Validated
Probab=24.43 E-value=8.3e+02 Score=25.56 Aligned_cols=93 Identities=13% Similarity=0.024 Sum_probs=59.3
Q ss_pred cCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChH--HHHHHHHHhhhccceeeecc
Q 038104 27 YGNRTSIIYE---------GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIP--AMYEMHFAVPMAEAVLNTIN 95 (567)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (567)
.++.++++.. +..+|+..+...+..+.. ..+++++|++...+|-.- .++..+++.+..|+..+ +.
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~-~~ 225 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQ---RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIA-LR 225 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHH---hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEE-ec
Confidence 4456666542 146888888765555433 347788998777665432 22333444556677655 44
Q ss_pred CCCChHHHHHHHHhcCceEEEEcccchH
Q 038104 96 VRLDAKNVASILRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (567)
+..+++.+...++..++.++...+....
T Consensus 226 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 253 (529)
T PRK07867 226 RKFSASGFLPDVRRYGATYANYVGKPLS 253 (529)
T ss_pred CCCCHHHHHHHHHHhCCeEEeccHHHHH
Confidence 5677888999999999998876555433
No 304
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=24.18 E-value=3.1e+02 Score=20.57 Aligned_cols=50 Identities=6% Similarity=-0.128 Sum_probs=32.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
..+.+.++......+.. +.. ..+++.|.+++..+.....+...+...|..
T Consensus 33 ~~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 82 (96)
T cd01529 33 RSIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGGK 82 (96)
T ss_pred EeCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCCC
Confidence 35667776554444432 322 356778999998877776666667777863
No 305
>PRK13383 acyl-CoA synthetase; Provisional
Probab=24.09 E-value=4.1e+02 Score=27.71 Aligned_cols=84 Identities=12% Similarity=-0.046 Sum_probs=60.9
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|...+...+..... ..++.++|++...++..-. ....++.++..|...+.++ ....+++...+++.+++.++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4677777666555544 3478899999988875332 2334667777888888775 467888999999999999999
Q ss_pred chHHHHHHH
Q 038104 278 APIVFNILL 286 (567)
Q Consensus 278 ~p~~~~~l~ 286 (567)
.+.....+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887766543
No 306
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=24.07 E-value=5e+02 Score=24.09 Aligned_cols=80 Identities=23% Similarity=0.225 Sum_probs=55.8
Q ss_pred HHHHHHHHcCCceEEEeCC-----eeeeHHHHHHHHHHHHHHHHhCC-CCCCCEEEEEcCChHHHHHHHHHhhhccceee
Q 038104 19 FLKRAAAVYGNRTSIIYEG-----ARFNWLQTYDRCRRLASSLRSLN-MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLN 92 (567)
Q Consensus 19 ~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~v~~la~~L~~~g-~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 92 (567)
-+.+.+-++++.+.+.-.| .+..+.++...-..+++.|.+.+ ..+.+.|.+-+|..+.-.. --++..+-.+.+
T Consensus 67 ~W~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~~~-~~al~~aD~vL~ 145 (243)
T PF06564_consen 67 DWQQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSPYT-RQALAAADLVLV 145 (243)
T ss_pred CHHHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcHHH-HHHHHhCCeEEE
Confidence 3455667788888887755 35666666777788888888876 6677889888888653333 335556777777
Q ss_pred eccCCCC
Q 038104 93 TINVRLD 99 (567)
Q Consensus 93 ~l~~~~~ 99 (567)
.+.|...
T Consensus 146 V~~~Da~ 152 (243)
T PF06564_consen 146 VVNPDAA 152 (243)
T ss_pred EeCCCHH
Confidence 7777653
No 307
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=24.05 E-value=4.3e+02 Score=22.63 Aligned_cols=24 Identities=21% Similarity=0.158 Sum_probs=19.3
Q ss_pred hHHHHHHHHcCCCceEEEEEeecC
Q 038104 452 SVELENVLFRHPRVLEAAVVAMPH 475 (567)
Q Consensus 452 ~~~iE~~l~~~~~v~~~~v~~~~~ 475 (567)
...|...+.++|+|.++.++...+
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~ 79 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGN 79 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECC
Confidence 356778888899999999987654
No 308
>PRK08526 threonine dehydratase; Provisional
Probab=23.97 E-value=7e+02 Score=25.25 Aligned_cols=101 Identities=9% Similarity=-0.061 Sum_probs=58.9
Q ss_pred HHHHHcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCC
Q 038104 22 RAAAVYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLD 99 (567)
Q Consensus 22 ~~a~~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~ 99 (567)
+..+....++++-.++. +-||++=- ..+++.....+ +.++| .|+ ...+=......++|...|..+..+-|...
T Consensus 28 ~Ls~~~g~~iylK~E~lqptGSfK~Rg-A~n~i~~l~~~-~~~~g-VV~--aSaGNhg~avA~aa~~~Gi~~~IvmP~~~ 102 (403)
T PRK08526 28 FLSKISGAEVYLKKENLQITGAYKIRG-AYNKIANLSEE-QKQHG-VIA--ASAGNHAQGVAISAKKFGIKAVIVMPEAT 102 (403)
T ss_pred HHHHHhCCeEEEEecCCCCCCCCHHHH-HHHHHHhccHh-hcCCE-EEE--ECccHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 33334445677777664 34443321 12222222222 22233 333 44444566666788899988888888766
Q ss_pred hHHHHHHHHhcCceEEEEcccchHHHHH
Q 038104 100 AKNVASILRHSEAKVFFVDCQYVQLARE 127 (567)
Q Consensus 100 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (567)
+..-...++..+++++++...+.+....
T Consensus 103 p~~k~~~~r~~GA~Vv~~g~~~~~a~~~ 130 (403)
T PRK08526 103 PLLKVSGTKALGAEVILKGDNYDEAYAF 130 (403)
T ss_pred CHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 6666677899999999998665444333
No 309
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=23.93 E-value=2.1e+02 Score=25.11 Aligned_cols=50 Identities=4% Similarity=0.001 Sum_probs=35.1
Q ss_pred CeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhcc
Q 038104 37 GARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAE 88 (567)
Q Consensus 37 ~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G 88 (567)
+.-+||.|+.+.+.++|..+.+. ++..+.+.+-..++-..++..+|- .+|
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~-~l~ 63 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP-RLD 63 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH-HcC
Confidence 56789999999999999999875 222233556666666666666664 344
No 310
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=23.89 E-value=7.5e+02 Score=24.87 Aligned_cols=69 Identities=10% Similarity=0.035 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhC---CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEc
Q 038104 48 RCRRLASSLRSL---NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVD 118 (567)
Q Consensus 48 ~v~~la~~L~~~---g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (567)
.=+.+|.++.+. .+.+.+-|.+-..-...+..++.+++.-|=.++..+|.++.. ...+...+++.+.+.
T Consensus 70 LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y--~~~~~~~gg~~v~v~ 141 (393)
T COG0436 70 LREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSY--EAAVKLAGGKPVPVP 141 (393)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEEe
Confidence 334556666543 355555577777777777888888888887777777887763 345566666666665
No 311
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.65 E-value=3.7e+02 Score=21.26 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred HHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEccc---chHHHHHHhhhh
Q 038104 78 YEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQ---YVQLAREALKLY 132 (567)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---~~~~~~~~~~~~ 132 (567)
......+-..|..++.+.+..+.+++...+.+.+|++|..+.. ....+.+..+.+
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l 74 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEEL 74 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHH
Confidence 3333445568999999999999999999999999999888643 334444444433
No 312
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=23.37 E-value=5.3e+02 Score=22.93 Aligned_cols=90 Identities=18% Similarity=0.292 Sum_probs=52.4
Q ss_pred CEEEEecc-hHhhhhHHHHHHHH-hhCceeeee-CCCCHHHHHHHHHhcCcceeecchH---HH---HHHHhcCCccccc
Q 038104 225 PVYLWSLP-MFHCNGWTFTWGVA-ARGGTNVCL-RNTTAYDMYRNISQHRVTHMCCAPI---VF---NILLQAKPEERKE 295 (567)
Q Consensus 225 d~~~~~~p-~~~~~g~~~~~~~~-~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~---~~---~~l~~~~~~~~~~ 295 (567)
.+++.+.+ =.|..|...+-..+ ..|..++.. ...+++++.+.+.+.+|+++..+-+ .+ ..+.+..... .
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~--~ 161 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEA--G 161 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHC--C
Confidence 34444444 37777776654444 356665544 4568899999999999998765532 22 2222222111 1
Q ss_pred CCCceEEEEcCCCCCHHHHHH
Q 038104 296 IASPVQILTGGAPPPASLLEE 316 (567)
Q Consensus 296 l~~l~~~~~~g~~l~~~~~~~ 316 (567)
...--.+++||..++++..+.
T Consensus 162 ~~~~~~i~vGG~~~~~~~~~~ 182 (201)
T cd02070 162 LRDKVKVMVGGAPVNQEFADE 182 (201)
T ss_pred CCcCCeEEEECCcCCHHHHHH
Confidence 111235888999998865443
No 313
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=23.30 E-value=40 Score=16.18 Aligned_cols=9 Identities=44% Similarity=0.918 Sum_probs=6.5
Q ss_pred cccccccCC
Q 038104 327 AYGLTEATG 335 (567)
Q Consensus 327 ~yG~tE~~~ 335 (567)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888764
No 314
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=23.28 E-value=8.1e+02 Score=25.04 Aligned_cols=85 Identities=7% Similarity=0.006 Sum_probs=52.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHHHHhhhhhccccC
Q 038104 59 LNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRD 138 (567)
Q Consensus 59 ~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 138 (567)
.|+..|++++++..-...+.-. +......+...+...+.++....|+..+|.++++.++....+.+........
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~--- 211 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT--- 211 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC---
Confidence 3889999999984322222221 2222322344444466788999999999999999998877776655432211
Q ss_pred CCCCeEEEEeC
Q 038104 139 AAGPRVILIDD 149 (567)
Q Consensus 139 ~~~~~ii~~~~ 149 (567)
...+.++...+
T Consensus 212 ~~~k~ii~~~E 222 (430)
T TIGR02304 212 IKPKKVISVAE 222 (430)
T ss_pred CCceEEEEccC
Confidence 13455555544
No 315
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=23.28 E-value=7.3e+02 Score=25.98 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccC
Q 038104 19 FLKRAAAVYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINV 96 (567)
Q Consensus 19 ~l~~~a~~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 96 (567)
.+.+..+....++++-.++. +-||+. .-..++++..-.+.+ .+| .|. +..+=......++|.+.|..++.+-|
T Consensus 22 ~~~~Ls~~~g~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g-VV~--aSaGNha~~vA~aa~~~Gi~~~IvmP 96 (499)
T TIGR01124 22 KAAKLSERLGNRILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG-VIA--ASAGNHAQGVAFSAARLGLKALIVMP 96 (499)
T ss_pred ehHHHHHHhCCEEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE-EEE--ECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 33344444455777777653 345655 222233332212221 222 333 33444555666788899998888888
Q ss_pred CCChHHHHHHHHhcCceEEEEcccchH
Q 038104 97 RLDAKNVASILRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (567)
...+..-...++..+++++++...+.+
T Consensus 97 ~~tp~~Kv~~~r~~GA~Vvl~g~~~d~ 123 (499)
T TIGR01124 97 ETTPDIKVDAVRGFGGEVVLHGANFDD 123 (499)
T ss_pred CCCCHHHHHHHHhCCCEEEEeCcCHHH
Confidence 777776778899999999999765433
No 316
>PRK12483 threonine dehydratase; Reviewed
Probab=23.12 E-value=6.4e+02 Score=26.60 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=58.4
Q ss_pred CCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHH
Q 038104 28 GNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVAS 105 (567)
Q Consensus 28 p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (567)
..++++-.++. +-||+. .-..+++.....+. .++| .|+--. +=......++|..+|..+..+-|...+..-..
T Consensus 51 g~~IylK~E~lqptGSfK~-RGA~n~i~~l~~~~-~~~G-VV~aSa--GNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~ 125 (521)
T PRK12483 51 GNQVLLKREDLQPVFSFKI-RGAYNKMARLPAEQ-LARG-VITASA--GNHAQGVALAAARLGVKAVIVMPRTTPQLKVD 125 (521)
T ss_pred CCEEEEEEcCCCCCCchHH-HHHHHHHHHhHHHH-hcCc-EEEECC--CHHHHHHHHHHHHhCCCEEEEECCCCCHHHHH
Confidence 34566666553 334533 22233343322222 2344 343333 44556666788899998888888777777778
Q ss_pred HHHhcCceEEEEcccchHHHHHHh
Q 038104 106 ILRHSEAKVFFVDCQYVQLAREAL 129 (567)
Q Consensus 106 ~l~~~~~~~ii~~~~~~~~~~~~~ 129 (567)
.++..+++++++...+.+....+.
T Consensus 126 ~~r~~GAeVil~g~~~d~a~~~A~ 149 (521)
T PRK12483 126 GVRAHGGEVVLHGESFPDALAHAL 149 (521)
T ss_pred HHHHCCCEEEEECCCHHHHHHHHH
Confidence 899999999999876554444433
No 317
>PTZ00297 pantothenate kinase; Provisional
Probab=23.07 E-value=5e+02 Score=31.47 Aligned_cols=86 Identities=9% Similarity=0.045 Sum_probs=61.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCh--HHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNI--PAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVF 115 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (567)
..+|.+.+...+..++....-.+..++|+...++|=. .+ .+..++++..|+.... .+.+.+...++..+|.++
T Consensus 619 VmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~e-r~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~ 693 (1452)
T PTZ00297 619 VRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFN-RVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTIL 693 (1452)
T ss_pred EEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHH-HHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEE
Confidence 5799999999988876542212356789887787753 33 3456777888877652 357889999999999999
Q ss_pred EEcccchHHHHHH
Q 038104 116 FVDCQYVQLAREA 128 (567)
Q Consensus 116 i~~~~~~~~~~~~ 128 (567)
+.-+..++++.+.
T Consensus 694 ~~VPrv~ekI~~~ 706 (1452)
T PTZ00297 694 VAAPSLFSTSRLQ 706 (1452)
T ss_pred EecHHHHHHHHHH
Confidence 9977666555443
No 318
>PRK08246 threonine dehydratase; Provisional
Probab=23.07 E-value=6.8e+02 Score=24.13 Aligned_cols=59 Identities=15% Similarity=0.080 Sum_probs=43.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccch
Q 038104 63 KHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYV 122 (567)
Q Consensus 63 ~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (567)
+++.|... ..+=.-..+.++|...|..+..+-|...++.-...++..++++++++....
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYA 125 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHH
Confidence 45555444 335556666678889998888887776667778899999999999987543
No 319
>PRK07514 malonyl-CoA synthase; Validated
Probab=22.99 E-value=4.5e+02 Score=27.15 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=60.7
Q ss_pred EEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 201 VVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 201 v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
..+|.+.+...+..... ..++.++|++....+.... ....++.++..|+..+.++ .....++...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e-~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPE-ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 46788887655544443 4578899999988876432 2334567778888887765 46788899999999999998
Q ss_pred cchHHHHHH
Q 038104 277 CAPIVFNIL 285 (567)
Q Consensus 277 ~~p~~~~~l 285 (567)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887766544
No 320
>PLN02574 4-coumarate--CoA ligase-like
Probab=22.91 E-value=7.1e+02 Score=26.27 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=60.5
Q ss_pred EechHHHHHHhhHhhh---h-ccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 202 VYSHRGAYLSTLSLIL---G-WEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
.+|.+.+...+..... . .+++++|++....+-...+ ...++.++..|+..+.++ .....++...++..++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 3678877665555443 3 5788999999988754322 334567777888877775 46778899999999999998
Q ss_pred cchHHHHHHH
Q 038104 277 CAPIVFNILL 286 (567)
Q Consensus 277 ~~p~~~~~l~ 286 (567)
..+.....+.
T Consensus 145 ~~~~~~~~~~ 154 (560)
T PLN02574 145 TSPENVEKLS 154 (560)
T ss_pred ECHHHHHHHH
Confidence 8887665553
No 321
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=22.79 E-value=5.2e+02 Score=28.41 Aligned_cols=87 Identities=6% Similarity=-0.046 Sum_probs=62.8
Q ss_pred ceEEechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcce
Q 038104 199 KGVVYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTH 274 (567)
Q Consensus 199 K~v~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 274 (567)
....+|.+.+...+..... ..+++++|++...++-.... ....++++..|+..+.+. ...++++...++..+++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 3467889888776666544 45889999999888764322 223566677787766654 567888999999999999
Q ss_pred eecchHHHHHHH
Q 038104 275 MCCAPIVFNILL 286 (567)
Q Consensus 275 l~~~p~~~~~l~ 286 (567)
+++....+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 998877665554
No 322
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=22.68 E-value=3.1e+02 Score=26.10 Aligned_cols=55 Identities=9% Similarity=0.032 Sum_probs=35.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC----------CChHHHHHHHHh-cCceEEEEc
Q 038104 61 MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR----------LDAKNVASILRH-SEAKVFFVD 118 (567)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~----------~~~~~l~~~l~~-~~~~~ii~~ 118 (567)
+++||.|.+--+... ....++...|+.++.+++. .+.+.+...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~---s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHK---SVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchH---HHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 478998877655432 2344566678888777553 457888888865 456765554
No 323
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=22.50 E-value=5.8e+02 Score=27.50 Aligned_cols=96 Identities=8% Similarity=0.056 Sum_probs=60.1
Q ss_pred CCCcEEEEeccCCCCCCceEEechHHHHHHhhHh---hhhccCCCCCEEEEecchHhhhhHHHHHHHHhhCceee-eeCC
Q 038104 182 EWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSL---ILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNV-CLRN 257 (567)
Q Consensus 182 ~~~~a~i~~TSGtTG~pK~v~~~~~~l~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~-~~~~ 257 (567)
.+.++.+.---++.+.+ + ++.+.++...... ....+++++|++...+|+.-..-+ ..+.....|+-.. ....
T Consensus 79 ~~~~a~~~~~~~~~~~~--~-~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~i-a~lA~~r~Gai~~~v~~~ 154 (626)
T KOG1175|consen 79 GDKVAIIFEGNEGGDTE--V-WTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVI-AMLACARIGAIHSSVFAG 154 (626)
T ss_pred CCCcEEEEEecCCCceE--E-EEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHH-HHHHHhhcCeEEEEeecc
Confidence 34555555544444433 3 6666665444332 236689999999999998544322 2333344444433 3357
Q ss_pred CCHHHHHHHHHhcCcceeecchHH
Q 038104 258 TTAYDMYRNISQHRVTHMCCAPIV 281 (567)
Q Consensus 258 ~~~~~~~~~i~~~~~t~l~~~p~~ 281 (567)
+.+..+...+...++..+++.-..
T Consensus 155 fs~~~l~~Rl~~~~~k~i~t~d~~ 178 (626)
T KOG1175|consen 155 FSAKELLDRLQDSKAKVIITQDVV 178 (626)
T ss_pred CCHHHHHHHHHhcCCCEEEEEeee
Confidence 899999999999999888776443
No 324
>COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]
Probab=22.31 E-value=87 Score=29.97 Aligned_cols=91 Identities=20% Similarity=0.231 Sum_probs=59.0
Q ss_pred ceEEEecCCcEEEEccCCceeeeCceeechHHHHHHHHcCCCceEEEEEeecCCCCCCceeEEEEeecCCCCCCCCCCHH
Q 038104 423 DVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEA 502 (567)
Q Consensus 423 D~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~ 502 (567)
|.+..-.+|.+.+.+|....|.. +++.+++++...+.. ++.+.-..|.++..++......-....-.|..
T Consensus 52 diAekyG~G~i~iT~rqg~ei~~----i~~e~~~~v~~~L~~------iG~~~G~~G~~vr~i~aC~G~~~C~~a~~Dt~ 121 (317)
T COG2221 52 DIAEKYGDGLIHITSRQGLEIPG----ISPEDADDVVEELRE------IGLPVGSTGPAVRAIVACPGPRTCETALYDTT 121 (317)
T ss_pred HHHHHhCCCeEEEEecCceEecc----CCHHHHHHHHHHHHH------cCCCCCCcchhhhhhhcCcCcccccccccChH
Confidence 34444457889999998766643 777777777666542 35555555655555554443333344567788
Q ss_pred HHHHHHHhhCCCCccccEEEE
Q 038104 503 DILSYCRENLSRFMVPKKVVI 523 (567)
Q Consensus 503 ~l~~~~~~~l~~~~~p~~i~~ 523 (567)
.|.+.+.+.+-....|.++.+
T Consensus 122 ~la~~l~e~f~~~~~P~KfKI 142 (317)
T COG2221 122 ELARRLEEEFLEVPVPYKFKI 142 (317)
T ss_pred HHHHHHHHHhhcCCCCceEEE
Confidence 888888888777777877765
No 325
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=22.15 E-value=6.2e+02 Score=23.23 Aligned_cols=48 Identities=25% Similarity=0.160 Sum_probs=27.4
Q ss_pred CceEEEecCCcEEEEccCCceeeeCce---eechHHHHHHHHcCCCceEEEEEeec
Q 038104 422 GDVGVIHPDGYLEIKDRSKDVIISGGE---NISSVELENVLFRHPRVLEAAVVAMP 474 (567)
Q Consensus 422 GD~~~~~~~g~l~~~GR~~d~i~~~G~---~v~~~~iE~~l~~~~~v~~~~v~~~~ 474 (567)
|.+.|.++||.+.+.|.. +...+. .+.-..++..+..++ .+..+++.+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~ 105 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAP 105 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCC
Confidence 447788999999998864 444442 333322334444555 345555543
No 326
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.87 E-value=8.1e+02 Score=24.50 Aligned_cols=109 Identities=14% Similarity=0.063 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHcC-CceEEEeCCee---eeHHHHHHHHHHHHHHHHhC----------------CCCC--CCEEEEEcC
Q 038104 15 SPLTFLKRAAAVYG-NRTSIIYEGAR---FNWLQTYDRCRRLASSLRSL----------------NMPK--HSVVSVLAP 72 (567)
Q Consensus 15 tl~~~l~~~a~~~p-~~~a~~~~~~~---~Ty~el~~~v~~la~~L~~~----------------g~~~--gd~V~i~~~ 72 (567)
|..--+.+.++... .++++-.++.+ -||+..-.... ++..+.+. .+++ |..-.+...
T Consensus 23 TPL~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~aS 101 (376)
T TIGR01747 23 TPLCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYA-IAQYLAEKLHLDIETLSFEHLKNDAIGEKMGQATFATAT 101 (376)
T ss_pred CCCcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHH-HHHHHHHHhCCCcccCCHHHHhhhHHHhhcCCCEEEEEC
Confidence 33344455555565 57888877653 47766544333 44443321 1111 222334444
Q ss_pred ChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHH
Q 038104 73 NIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQL 124 (567)
Q Consensus 73 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (567)
.+=.-..+.++|...|..++.+-|...+..-...++..++++++++..+.+.
T Consensus 102 sGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~a 153 (376)
T TIGR01747 102 DGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDDT 153 (376)
T ss_pred ccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 4555666667788899888887777666777888889999999998754443
No 327
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=21.80 E-value=3.9e+02 Score=25.96 Aligned_cols=89 Identities=11% Similarity=-0.040 Sum_probs=55.0
Q ss_pred CceEEEeCC--eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHH
Q 038104 29 NRTSIIYEG--ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASI 106 (567)
Q Consensus 29 ~~~a~~~~~--~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (567)
.++++-.++ .+=|+++ +.+..+...+.+.| +++|... ..+-.-..+.++|...|..+..+-|...+..-...
T Consensus 38 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKD--RGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHH--hhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 467777655 3344442 22333333344444 4555554 23334444557888899888877776656677888
Q ss_pred HHhcCceEEEEcccchH
Q 038104 107 LRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 107 l~~~~~~~ii~~~~~~~ 123 (567)
++..++++++++.....
T Consensus 112 l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 112 ALAYGATVLAVEGNFDD 128 (324)
T ss_pred HHHcCCEEEEECCcHHH
Confidence 99999999999865433
No 328
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=21.80 E-value=4.2e+02 Score=27.49 Aligned_cols=84 Identities=5% Similarity=-0.088 Sum_probs=60.0
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|...+...+..... ..++.+++++....|.... .....+..+..|+..+.+. ....+++...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 4677777655544443 4578899999988876433 2334566677788877665 467888999999999999998
Q ss_pred chHHHHHHH
Q 038104 278 APIVFNILL 286 (567)
Q Consensus 278 ~p~~~~~l~ 286 (567)
.......+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 877666553
No 329
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=21.72 E-value=87 Score=17.79 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=16.6
Q ss_pred CCCCCCCccchHHHHHHHHhh
Q 038104 527 LPKTATGKIQKFQLRALAKNF 547 (567)
Q Consensus 527 ~P~t~~GKv~r~~l~~~~~~~ 547 (567)
+-++.+|+|++..+++..+++
T Consensus 9 ~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 9 FDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HSTTSSSEEEHHHHHHHHHHT
T ss_pred HCCCCCCcCCHHHHHHHHHhC
Confidence 456789999999998887653
No 330
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=21.71 E-value=3.1e+02 Score=21.37 Aligned_cols=50 Identities=4% Similarity=-0.111 Sum_probs=35.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeec
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTI 94 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 94 (567)
..+.+.++.+ .+.+.+..+++.|.+++.++.....+...+...|..-+.+
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 4577766543 3445555667789999999888777778888888766543
No 331
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.56 E-value=5.1e+02 Score=24.66 Aligned_cols=88 Identities=8% Similarity=0.043 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChH---HHHHHHHhcCceEEE
Q 038104 42 WLQTYDRCRRLASSLRSL--NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAK---NVASILRHSEAKVFF 116 (567)
Q Consensus 42 y~el~~~v~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii 116 (567)
+..+.++.+.+-..+.+. .+....+..+...+...++.--|++-..+..-.--...-++. ++...++..+.++||
T Consensus 152 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 231 (287)
T cd01137 152 AAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVF 231 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 344444445555544432 333334567777778888888777765553211111223454 455556778899999
Q ss_pred EcccchHHHHHHh
Q 038104 117 VDCQYVQLAREAL 129 (567)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (567)
++.....+..+.+
T Consensus 232 ~e~~~~~~~~~~i 244 (287)
T cd01137 232 VESTVNDRLMKQV 244 (287)
T ss_pred EeCCCChHHHHHH
Confidence 9887666544433
No 332
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=21.54 E-value=6.5e+02 Score=24.01 Aligned_cols=98 Identities=9% Similarity=-0.006 Sum_probs=58.7
Q ss_pred HHHHHHcCCceEEEeCCe--eeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCC
Q 038104 21 KRAAAVYGNRTSIIYEGA--RFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRL 98 (567)
Q Consensus 21 ~~~a~~~p~~~a~~~~~~--~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (567)
.+..+....++++-.++. +-|+++... ..+-..+.+.| +++.|... ..+-.-..+.++|...|..++.+-|..
T Consensus 24 ~~l~~~~g~~i~~K~E~~nptgS~Kdr~a--~~~l~~~~~~~--~~~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~ 98 (304)
T cd01562 24 PTLSELLGAEVYLKCENLQKTGSFKIRGA--YNKLLSLSEEE--RAKGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPET 98 (304)
T ss_pred hhhHHHhCCeEEEEeccCCCcCCcHHHhH--HHHHHhcCHhh--cCCcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 333344445777776654 444443221 11111222223 23444443 445666666777888998888777776
Q ss_pred ChHHHHHHHHhcCceEEEEcccchH
Q 038104 99 DAKNVASILRHSEAKVFFVDCQYVQ 123 (567)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (567)
.+......++..+++++.++.....
T Consensus 99 ~~~~k~~~l~~~Ga~vi~~~~~~~~ 123 (304)
T cd01562 99 APAAKVDATRAYGAEVVLYGEDFDE 123 (304)
T ss_pred CCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 6677788999999999999876433
No 333
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.33 E-value=4.7e+02 Score=24.73 Aligned_cols=86 Identities=15% Similarity=0.187 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC--CCh---HHHHHHHHhcCceEE
Q 038104 43 LQTYDRCRRLASSLRSL--NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR--LDA---KNVASILRHSEAKVF 115 (567)
Q Consensus 43 ~el~~~v~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~---~~l~~~l~~~~~~~i 115 (567)
..+.++.+.+-..+++. .+....+..+...+...+++-.+++-..|..- +.+. -++ .++...++..+.++|
T Consensus 137 ~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~i 214 (276)
T cd01016 137 EAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQG--ISTDSEAGLRDINELVDLIVERKIKAI 214 (276)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcC--CCcccCCCHHHHHHHHHHHHHcCCCEE
Confidence 33444444444444432 23334567777788888888888876666322 2232 234 445566677889999
Q ss_pred EEcccchHHHHHHhh
Q 038104 116 FVDCQYVQLAREALK 130 (567)
Q Consensus 116 i~~~~~~~~~~~~~~ 130 (567)
|++....++..+.+.
T Consensus 215 f~e~~~~~~~~~~l~ 229 (276)
T cd01016 215 FVESSVNQKSIEALQ 229 (276)
T ss_pred EEeCCCCHHHHHHHH
Confidence 999887665555543
No 334
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.85 E-value=4.2e+02 Score=26.95 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=54.6
Q ss_pred CCCCHHHHHHHHHHHcCCceEEEe-CCeeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccce
Q 038104 12 VPLSPLTFLKRAAAVYGNRTSIIY-EGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~ 90 (567)
+.-.|.+.-+..|+.+...-.+.. .|.+.. -.+..+.- +++||.| ++-.|+=..+.. ||...|+.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g---------~~a~i~a~--~~~gd~V-Lv~RN~HkSv~~--alil~ga~ 129 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSG---------NQAMIMAL--CRPGDKV-LVDRNCHKSVYN--ALILSGAI 129 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHH---------HHHHHHHH--TTTTCEE-EEETT--HHHHH--HHHHHTEE
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHH---------HHHHHHHh--cCCCCEE-EEcCCcHHHHHH--HHHHcCCe
Confidence 344566666667777764444444 333211 11111111 4789975 445555444443 99999999
Q ss_pred eeeccCC---------CCh-----HHHHHHHHhcC-ce----EEEEcccc
Q 038104 91 LNTINVR---------LDA-----KNVASILRHSE-AK----VFFVDCQY 121 (567)
Q Consensus 91 ~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~ii~~~~~ 121 (567)
++.++|. .++ +.+...+++.. ++ ++|+.+.+
T Consensus 130 Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 130 PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred EEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 9998883 233 78888888763 33 46666554
No 335
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=20.70 E-value=4.6e+02 Score=27.62 Aligned_cols=83 Identities=12% Similarity=0.007 Sum_probs=60.6
Q ss_pred EechHHHHHHhhHhhh----hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceee
Q 038104 202 VYSHRGAYLSTLSLIL----GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMC 276 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 276 (567)
.+|++.+...+..... ..++++++++...++....+ ....+.++..|+..+.++ .....++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 4788888666655543 35788999999888764332 234667778888888664 56788899999999999999
Q ss_pred cchHHHHHH
Q 038104 277 CAPIVFNIL 285 (567)
Q Consensus 277 ~~p~~~~~l 285 (567)
........+
T Consensus 129 ~~~~~~~~~ 137 (560)
T PRK08751 129 VIDNFGTTV 137 (560)
T ss_pred EcchhHHHH
Confidence 877665443
No 336
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=20.62 E-value=4.9e+02 Score=26.33 Aligned_cols=59 Identities=7% Similarity=-0.055 Sum_probs=44.7
Q ss_pred EEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEcccchHHHH
Q 038104 68 SVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAR 126 (567)
Q Consensus 68 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (567)
.+-...+=.-..+.++|...|..++.+-|...+..-...++..++++++++........
T Consensus 137 VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~ 195 (404)
T cd06447 137 IAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVE 195 (404)
T ss_pred EEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHH
Confidence 34444455566677788899999888888877888888999999999999876554433
No 337
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=20.61 E-value=7.8e+02 Score=23.80 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCC--CChHH---HHHHHHhcCceE
Q 038104 42 WLQTYDRCRRLASSLRSL--NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVR--LDAKN---VASILRHSEAKV 114 (567)
Q Consensus 42 y~el~~~v~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~ 114 (567)
+.++.++.+.+-.++++. .+ + .+..+...+...++.--+++-..|.. -+.+. -++.+ +...++..+.++
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~-~-~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 255 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPV-K-GKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATC 255 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-C-CCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 444444455555555442 22 2 34456677788888888887766633 23333 24555 455556778999
Q ss_pred EEEcccchHHHHHHhh
Q 038104 115 FFVDCQYVQLAREALK 130 (567)
Q Consensus 115 ii~~~~~~~~~~~~~~ 130 (567)
||++....++..+.+.
T Consensus 256 If~e~~~~~~~~~~la 271 (311)
T PRK09545 256 VFAEPQFRPAVIESVA 271 (311)
T ss_pred EEecCCCChHHHHHHH
Confidence 9999887776655554
No 338
>PRK06207 aspartate aminotransferase; Provisional
Probab=20.55 E-value=8.8e+02 Score=24.38 Aligned_cols=145 Identities=10% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHhhhccceeeecc-------CCCChHHHHHHHHhcCceEEEEccc-------chHHHH
Q 038104 61 MPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTIN-------VRLDAKNVASILRHSEAKVFFVDCQ-------YVQLAR 126 (567)
Q Consensus 61 ~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-------~~~~~~~l~~~l~~~~~~~ii~~~~-------~~~~~~ 126 (567)
+++||.|++..| +...+..++....+..+.++++ ...+.+.+...++...-.++++++. ..+.+.
T Consensus 123 ~~~Gd~Vlv~~P-~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~ 201 (405)
T PRK06207 123 VARGDKVAIVQP-DYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIA 201 (405)
T ss_pred cCCCCEEEEeCC-CchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHH
Q ss_pred HHhhhhhccccCCCCCeEEEEeCCCCCCCccCCcccHHHHHhcCCCCCCCCCCCCCCCcEEEEecc----CCCCCCceEE
Q 038104 127 EALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTS----GTTSAPKGVV 202 (567)
Q Consensus 127 ~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS----GtTG~pK~v~ 202 (567)
++.+... ....++..|+ .|.++.-.+.............+..+++.|- |-.|..-|.+
T Consensus 202 ~l~~~a~------~~~~~iI~De------------~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~i 263 (405)
T PRK06207 202 QIAALAR------RYGATVIVDQ------------LYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVA 263 (405)
T ss_pred HHHHHHH------HcCCEEEEec------------cccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEE
Q ss_pred echHHHHHHhhHhhhhccCCCC
Q 038104 203 YSHRGAYLSTLSLILGWEMGSA 224 (567)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~~~~~ 224 (567)
+....++.........+.....
T Consensus 264 i~~~~l~~~~~~~~~~~~~~~~ 285 (405)
T PRK06207 264 FGSPAIIDRMEKLQAIVSLRAA 285 (405)
T ss_pred EcCHHHHHHHHHHHhHhccCCC
No 339
>PRK06178 acyl-CoA synthetase; Validated
Probab=20.47 E-value=5.2e+02 Score=27.32 Aligned_cols=84 Identities=8% Similarity=-0.006 Sum_probs=61.6
Q ss_pred EechHHHHHHhhHhhh---hccCCCCCEEEEecchHhhhhHHHHHHHHhhCceeeeeC-CCCHHHHHHHHHhcCcceeec
Q 038104 202 VYSHRGAYLSTLSLIL---GWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLR-NTTAYDMYRNISQHRVTHMCC 277 (567)
Q Consensus 202 ~~~~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 277 (567)
.+|...+...+..... ..++++++++....+-.... ...++.++..|+..+.++ ......+...+++.++..+++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788887665555443 34788999999888765432 334667777888877664 467788999999999999999
Q ss_pred chHHHHHHH
Q 038104 278 APIVFNILL 286 (567)
Q Consensus 278 ~p~~~~~l~ 286 (567)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766554
No 340
>PRK05939 hypothetical protein; Provisional
Probab=20.46 E-value=3.3e+02 Score=27.47 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEEc
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVD 118 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (567)
..+...|... +++||.|.+.-+.-......+-++.+.|+.+..++.. ..+.+...+.. +.++|+++
T Consensus 73 ~Ai~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 73 AAIAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred HHHHHHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
No 341
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=20.36 E-value=7.4e+02 Score=23.44 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCCh---HHHHHHHHhcCceEEE
Q 038104 42 WLQTYDRCRRLASSLRSL--NMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDA---KNVASILRHSEAKVFF 116 (567)
Q Consensus 42 y~el~~~v~~la~~L~~~--g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~---~~l~~~l~~~~~~~ii 116 (567)
++++.++...+-.++.+. .+ ++ +..+...+...+++-.+++-..|..-.--.-.-++ .++...++..+.++||
T Consensus 148 ~~~~~~~L~~l~~~~~~~~~~~-~~-~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 225 (282)
T cd01017 148 AAAYAKKLEALDQEYRAKLAKA-KG-KTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIF 225 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CC-CeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 334444444444444432 22 23 34556666888888888776655321111122344 4455566778899999
Q ss_pred EcccchHHHHHHhh
Q 038104 117 VDCQYVQLAREALK 130 (567)
Q Consensus 117 ~~~~~~~~~~~~~~ 130 (567)
++....++..+.+.
T Consensus 226 ~e~~~~~~~~~~la 239 (282)
T cd01017 226 FEENASSKIAETLA 239 (282)
T ss_pred EeCCCChHHHHHHH
Confidence 99887765555443
No 342
>PRK08813 threonine dehydratase; Provisional
Probab=20.21 E-value=8.5e+02 Score=24.08 Aligned_cols=82 Identities=9% Similarity=-0.126 Sum_probs=51.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCChHHHHHHHHHhhhccceeeeccCCCChHHHHHHHHhcCceEEEE
Q 038104 38 ARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFV 117 (567)
Q Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (567)
.+-||++--.. ..+. .+.+.|...+ .+....+=.-..+.++|...|..+..+-|...+..-...++.+++.++.+
T Consensus 59 ptGSfK~RgA~-~~l~-~a~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~ 133 (349)
T PRK08813 59 RTGSYKVRGAL-NALL-AGLERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQH 133 (349)
T ss_pred CcCCCHHHHHH-HHHH-HHHHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 45566543222 2222 3334443333 23444455566667788899988887777766667778889999999999
Q ss_pred cccchHH
Q 038104 118 DCQYVQL 124 (567)
Q Consensus 118 ~~~~~~~ 124 (567)
...+.+.
T Consensus 134 g~~~~~a 140 (349)
T PRK08813 134 GNSYDEA 140 (349)
T ss_pred CCCHHHH
Confidence 7655443
No 343
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=20.07 E-value=2.4e+02 Score=22.38 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC-hHHHHHHHHHhhhccce
Q 038104 50 RRLASSLRSLNMPKHSVVSVLAPN-IPAMYEMHFAVPMAEAV 90 (567)
Q Consensus 50 ~~la~~L~~~g~~~gd~V~i~~~~-~~~~~~~~lA~~~~G~~ 90 (567)
..+...+.+.|+.+++.|.+++.. +.....+...+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 456666777889999999999988 46666666777778865
No 344
>PRK07671 cystathionine beta-lyase; Provisional
Probab=20.03 E-value=8.8e+02 Score=24.18 Aligned_cols=51 Identities=10% Similarity=-0.026 Sum_probs=24.4
Q ss_pred EEcCChHHHHHHHHHhhhccceeeeccCCCCh--HHHHHHHHhcCceEEEEcc
Q 038104 69 VLAPNIPAMYEMHFAVPMAEAVLNTINVRLDA--KNVASILRHSEAKVFFVDC 119 (567)
Q Consensus 69 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~ 119 (567)
++.+++...+.++++++..|-.++..++.++. ..+...+...++++++++.
T Consensus 69 ~~~~sG~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 69 FAFGSGMAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred EEeCCHHHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 44555554444445555555555544444432 1223344455555555543
Done!