Citrus Sinensis ID: 038104

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVSKDHNAQSRAQILAMSRL
cccccccccccccccHHHHHHHHHHHccccEEEEEcccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHccccccHHcccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccccccccccEEEEEcccccccccccccccHHHHHHccccccccccccccccHHHcccccccccccccEEEccHHHHHHHHHHHHccccccccEEEEcccccccccccHHHHHHHHcccEEccccccHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccEEEEECcccccHHHHHHHHHcccEEEEECcccccccccccccccccccccccHHHHHHHHcccccccccccCEEEEcccccccccccccEEEEEEEccHHccccccccccccccccccccccccEEEEcccccEEEEcccccEEEcccccccHHHHHHHHcccccccEEEEEEcccccccccEEEEEEEccccccccccccHHHHHHHHHccccccccccEEEEcccccccccccccHHHHHHHHcccccccccccccHHHHHHcccc
****S**EANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNF*************ILAMS**
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVLAPNIPAMYEMHFAVPMAEAVLNTINVRLDAKNVASILRHSEAKVFFVDCQYVQLAREALKLYFVEDRDAAGPRVILIDDIDSPTGIRFGEFEYEQFVQMGDPRFLPEEIHDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTTAYDMYRNISQHRVTHMCCAPIVFNILLQAKPEERKEIASPVQILTGGAPPPASLLEEIELLGFHVTHAYGLTEATGPALVCEWQSSWNQLPKPDQAKLKARQGISILTLADVDVKNLDTMSSVPRDGKTMGEIVLRGSSIMKGYLKNEEATSQSFKNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELENVLFRHPRVLEAAVVAMPHPQWGESPCAFISVKTNSAGKTDDVNEADILSYCRENLSRFMVPKKVVILPELPKTATGKIQKFQLRALAKNFAVSKDHNAQSRAQILAMSRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable acyl-activating enzyme 12, peroxisomal May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.probableQ9SS00
Long-chain-fatty-acid--CoA ligase Catalyzes the esterification of a number of long chain fatty acids with CoA, resulting in the formation of long-chain fatty acyl-CoA. Myristate (C14) is the most efficiently processed fatty acid, followed by palmitate (C16). Also catalyzes the esterification of stearate (C18) and laurate (C12), but at lower efficiency. Does not catalyze the esterification of the unsaturated fatty acids mysteroleic and palmitoleic acids in vitro.probableQ5SKN9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RY2, chain A
Confidence level:very confident
Coverage over the Query: 9-545
View the alignment between query and template
View the model in PyMOL
Template: 3KXW, chain A
Confidence level:very confident
Coverage over the Query: 7-150,165-556
View the alignment between query and template
View the model in PyMOL